View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3729_high_14 (Length: 243)
Name: NF3729_high_14
Description: NF3729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3729_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 32950830 - 32950609
Alignment:
| Q |
1 |
ggctgaagaccaaaagctgagagctgaagaaagaatgaggatcggtgaagagatagatttcgctgaagttcaaaatcttgaagataaaaggaggaaagct |
100 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32950830 |
ggctgaaaaccaaaagctgagagctgaagaaagaatgaggatcggtgaagagatagatttcgctgaagttcaaaatcttgaagataaaaggaggaaagct |
32950731 |
T |
|
| Q |
101 |
aacatcgaaattctaaagctgagagacagaaagcggaaagctaaagacagaatgcagaaagctgaagaccgaaggcagaaagctaagataactgaagttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
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| T |
32950730 |
aacatcgaaattctaaagctgagagacagaaagcggaaagctaaagacagaatgcagaaagctgaagaccgaaagcagaaagctaagataa-tgaagttc |
32950632 |
T |
|
| Q |
201 |
gaaagcagccagccacccaggat |
223 |
Q |
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||||| ||||||||||||||||| |
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| T |
32950631 |
gaaagaagccagccacccaggat |
32950609 |
T |
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