View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3732_low_6 (Length: 462)

Name: NF3732_low_6
Description: NF3732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3732_low_6
NF3732_low_6
[»] chr7 (38 HSPs)
chr7 (1-462)||(44886679-44887139)
chr7 (29-106)||(1748494-1748571)
chr7 (29-106)||(34729261-34729338)
chr7 (18-105)||(4998271-4998358)
chr7 (29-106)||(38175016-38175093)
chr7 (18-90)||(7629005-7629077)
chr7 (18-106)||(23160911-23160999)
chr7 (31-106)||(8790880-8790955)
chr7 (29-84)||(48103598-48103653)
chr7 (16-106)||(21028408-21028498)
chr7 (18-136)||(39389570-39389688)
chr7 (29-106)||(7415897-7415974)
chr7 (29-106)||(27513269-27513346)
chr7 (29-93)||(35213859-35213923)
chr7 (30-136)||(19397095-19397201)
chr7 (21-103)||(31015428-31015510)
chr7 (29-106)||(46759528-46759605)
chr7 (18-106)||(19008312-19008400)
chr7 (18-106)||(21766106-21766194)
chr7 (22-69)||(16842241-16842288)
chr7 (43-93)||(15971120-15971170)
chr7 (29-106)||(23050943-23051021)
chr7 (44-106)||(43066810-43066872)
chr7 (29-106)||(48109706-48109784)
chr7 (29-161)||(1786979-1787111)
chr7 (29-106)||(9334781-9334858)
chr7 (44-85)||(10199191-10199232)
chr7 (29-106)||(20055714-20055791)
chr7 (29-102)||(30240754-30240827)
chr7 (30-106)||(35446540-35446617)
chr7 (29-106)||(39779138-39779215)
chr7 (37-106)||(40356083-40356152)
chr7 (29-106)||(42963217-42963294)
chr7 (29-93)||(581964-582028)
chr7 (29-81)||(789114-789166)
chr7 (23-91)||(24060024-24060092)
chr7 (29-105)||(39465910-39465986)
chr7 (45-105)||(41383869-41383928)
[»] chr8 (33 HSPs)
chr8 (18-172)||(13765897-13766054)
chr8 (22-106)||(1170578-1170662)
chr8 (18-106)||(14876755-14876842)
chr8 (29-91)||(34180144-34180206)
chr8 (29-106)||(30800517-30800594)
chr8 (29-105)||(18638289-18638365)
chr8 (29-106)||(4430126-4430203)
chr8 (29-106)||(41666665-41666742)
chr8 (18-106)||(11929537-11929625)
chr8 (18-106)||(13755228-13755316)
chr8 (18-106)||(29039245-29039333)
chr8 (29-93)||(30264136-30264200)
chr8 (29-85)||(32173095-32173151)
chr8 (43-106)||(9107123-9107186)
chr8 (29-84)||(9503081-9503136)
chr8 (18-91)||(8511974-8512047)
chr8 (18-91)||(8514014-8514087)
chr8 (29-106)||(11352888-11352965)
chr8 (29-102)||(11904099-11904172)
chr8 (29-106)||(12470960-12471037)
chr8 (18-106)||(45489055-45489143)
chr8 (43-106)||(30682550-30682613)
chr8 (30-93)||(45440747-45440810)
chr8 (43-85)||(2079287-2079329)
chr8 (44-105)||(7020030-7020091)
chr8 (18-91)||(8517785-8517858)
chr8 (29-106)||(13369218-13369295)
chr8 (29-106)||(35457253-35457330)
chr8 (44-93)||(45356397-45356446)
chr8 (30-106)||(4536037-4536111)
chr8 (18-106)||(12542562-12542650)
chr8 (29-85)||(15044199-15044255)
chr8 (29-85)||(24852569-24852625)
[»] chr6 (25 HSPs)
chr6 (31-93)||(10587559-10587621)
chr6 (18-91)||(33573559-33573632)
chr6 (29-106)||(22837476-22837553)
chr6 (29-106)||(3833799-3833876)
chr6 (29-85)||(1190612-1190668)
chr6 (29-93)||(26252864-26252928)
chr6 (29-105)||(31861923-31861999)
chr6 (18-88)||(3103693-3103763)
chr6 (36-106)||(12169809-12169879)
chr6 (18-144)||(21104599-21104725)
chr6 (44-106)||(34638078-34638140)
chr6 (29-106)||(6877135-6877212)
chr6 (25-106)||(12184952-12185032)
chr6 (29-104)||(172811-172886)
chr6 (43-106)||(9894351-9894414)
chr6 (18-105)||(10266864-10266951)
chr6 (29-106)||(4075831-4075908)
chr6 (29-106)||(11646614-11646691)
chr6 (43-104)||(30233373-30233434)
chr6 (29-106)||(32349300-32349377)
chr6 (29-85)||(6875041-6875097)
chr6 (42-90)||(14426740-14426788)
chr6 (29-105)||(14965309-14965385)
chr6 (29-85)||(26538464-26538520)
chr6 (18-106)||(30591977-30592065)
[»] chr5 (31 HSPs)
chr5 (18-106)||(1584906-1584994)
chr5 (18-144)||(36700825-36700951)
chr5 (36-106)||(40716302-40716372)
chr5 (29-105)||(2530320-2530396)
chr5 (18-106)||(36092253-36092341)
chr5 (29-106)||(8942753-8942830)
chr5 (45-106)||(15341844-15341905)
chr5 (36-104)||(1591821-1591888)
chr5 (18-106)||(23270740-23270828)
chr5 (18-106)||(30332018-30332106)
chr5 (18-144)||(7648956-7649081)
chr5 (40-106)||(17064691-17064757)
chr5 (29-106)||(5026280-5026357)
chr5 (36-93)||(31364159-31364216)
chr5 (29-102)||(32234499-32234572)
chr5 (29-106)||(38162284-38162361)
chr5 (43-91)||(5769828-5769876)
chr5 (18-94)||(16313066-16313142)
chr5 (18-90)||(19929537-19929609)
chr5 (18-105)||(1093901-1093988)
chr5 (44-91)||(41613131-41613178)
chr5 (18-85)||(42207932-42207999)
chr5 (44-106)||(10543090-10543152)
chr5 (40-106)||(41862939-41863005)
chr5 (29-106)||(24836845-24836922)
chr5 (36-93)||(31314413-31314470)
chr5 (18-91)||(36526553-36526626)
chr5 (29-106)||(42097568-42097645)
chr5 (29-85)||(832277-832333)
chr5 (29-85)||(16312592-16312648)
chr5 (29-85)||(38455392-38455448)
[»] chr1 (30 HSPs)
chr1 (15-91)||(11409078-11409154)
chr1 (22-163)||(48715778-48715920)
chr1 (29-106)||(33326683-33326760)
chr1 (45-105)||(10388283-10388343)
chr1 (43-106)||(12267145-12267208)
chr1 (37-173)||(43415888-43416025)
chr1 (29-106)||(115794-115871)
chr1 (29-169)||(5935565-5935706)
chr1 (18-91)||(35547077-35547150)
chr1 (29-106)||(44667812-44667889)
chr1 (15-106)||(19275016-19275107)
chr1 (29-92)||(42676794-42676857)
chr1 (40-106)||(24561307-24561373)
chr1 (29-91)||(40808669-40808731)
chr1 (29-91)||(50943797-50943859)
chr1 (29-94)||(10172379-10172444)
chr1 (44-91)||(773838-773885)
chr1 (18-85)||(8214118-8214185)
chr1 (44-106)||(11407424-11407486)
chr1 (36-106)||(27926517-27926587)
chr1 (43-85)||(31529877-31529919)
chr1 (36-106)||(40368086-40368156)
chr1 (29-94)||(4242157-4242222)
chr1 (29-106)||(15476503-15476580)
chr1 (18-91)||(15597429-15597502)
chr1 (29-102)||(28041501-28041574)
chr1 (18-71)||(33475126-33475179)
chr1 (29-106)||(36604640-36604717)
chr1 (43-91)||(13315014-13315062)
chr1 (29-93)||(20906858-20906922)
[»] chr4 (29 HSPs)
chr4 (29-91)||(7438166-7438228)
chr4 (29-106)||(13781554-13781631)
chr4 (18-91)||(27550968-27551041)
chr4 (18-106)||(1397260-1397347)
chr4 (18-105)||(30503210-30503297)
chr4 (18-106)||(7391481-7391569)
chr4 (21-106)||(28808822-28808908)
chr4 (18-91)||(35034716-35034789)
chr4 (29-105)||(17702485-17702561)
chr4 (29-85)||(37143234-37143290)
chr4 (30-105)||(33145118-33145193)
chr4 (18-93)||(49320391-49320466)
chr4 (43-105)||(52793656-52793719)
chr4 (29-106)||(894001-894078)
chr4 (29-106)||(10251622-10251699)
chr4 (36-93)||(26878541-26878598)
chr4 (29-85)||(23091229-23091285)
chr4 (18-70)||(32006439-32006491)
chr4 (43-91)||(34659333-34659381)
chr4 (36-91)||(2179543-2179598)
chr4 (18-93)||(6788664-6788739)
chr4 (18-93)||(10524274-10524349)
chr4 (18-105)||(26088800-26088887)
chr4 (43-105)||(554652-554714)
chr4 (45-91)||(37831030-37831076)
chr4 (29-106)||(2290963-2291039)
chr4 (18-55)||(6488222-6488259)
chr4 (29-85)||(627926-627982)
chr4 (29-85)||(44470332-44470388)
[»] scaffold0707 (1 HSPs)
scaffold0707 (18-91)||(275-348)
[»] chr2 (32 HSPs)
chr2 (29-105)||(19039903-19039979)
chr2 (18-172)||(36080240-36080394)
chr2 (29-104)||(27359945-27360020)
chr2 (36-91)||(28146162-28146217)
chr2 (29-106)||(3357267-3357345)
chr2 (18-136)||(6063387-6063505)
chr2 (43-105)||(16039426-16039488)
chr2 (29-103)||(24791814-24791888)
chr2 (29-103)||(37867665-37867739)
chr2 (22-79)||(37498462-37498519)
chr2 (25-93)||(15265663-15265730)
chr2 (48-106)||(24004494-24004552)
chr2 (29-106)||(1111170-1111246)
chr2 (29-106)||(15508668-15508745)
chr2 (18-144)||(18072417-18072540)
chr2 (29-102)||(32114054-32114127)
chr2 (18-106)||(34753282-34753370)
chr2 (29-106)||(37610076-37610153)
chr2 (18-106)||(30874368-30874455)
chr2 (18-106)||(36802457-36802545)
chr2 (29-93)||(45407093-45407157)
chr2 (18-106)||(22881487-22881577)
chr2 (18-85)||(33133910-33133977)
chr2 (48-106)||(27913144-27913202)
chr2 (44-106)||(33025098-33025160)
chr2 (48-106)||(35156377-35156435)
chr2 (44-106)||(41633739-41633801)
chr2 (22-106)||(360415-360499)
chr2 (29-93)||(9779621-9779685)
chr2 (54-106)||(10553256-10553308)
chr2 (18-90)||(25915123-25915195)
chr2 (29-85)||(41633276-41633332)
[»] chr3 (35 HSPs)
chr3 (30-105)||(2513297-2513372)
chr3 (29-104)||(18020504-18020579)
chr3 (29-91)||(21495653-21495715)
chr3 (25-106)||(47787177-47787258)
chr3 (18-106)||(22130599-22130687)
chr3 (43-106)||(14266453-14266516)
chr3 (29-106)||(17395652-17395729)
chr3 (29-106)||(17476443-17476520)
chr3 (29-85)||(22152356-22152412)
chr3 (31-163)||(48795255-48795388)
chr3 (29-101)||(51006253-51006325)
chr3 (43-106)||(1451452-1451515)
chr3 (22-85)||(21970140-21970203)
chr3 (22-85)||(21992576-21992639)
chr3 (22-85)||(34413370-34413433)
chr3 (22-106)||(54982689-54982774)
chr3 (29-79)||(13875600-13875650)
chr3 (36-106)||(22258202-22258272)
chr3 (22-136)||(23268087-23268201)
chr3 (44-163)||(41923354-41923475)
chr3 (29-106)||(9859810-9859887)
chr3 (29-106)||(12565415-12565492)
chr3 (29-106)||(13259814-13259891)
chr3 (29-106)||(27398258-27398335)
chr3 (29-106)||(27399975-27400052)
chr3 (22-66)||(25995188-25995232)
chr3 (29-85)||(26130874-26130930)
chr3 (43-106)||(1149289-1149352)
chr3 (18-105)||(5492903-5492990)
chr3 (43-102)||(7791196-7791255)
chr3 (43-102)||(29541430-29541489)
chr3 (18-93)||(50098491-50098566)
chr3 (23-105)||(20838407-20838489)
chr3 (44-106)||(50099088-50099150)
chr3 (29-85)||(38809256-38809312)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-106)||(44331-44408)
[»] scaffold0830 (1 HSPs)
scaffold0830 (59-106)||(784-831)
[»] scaffold0128 (1 HSPs)
scaffold0128 (18-103)||(43036-43121)
[»] scaffold0649 (1 HSPs)
scaffold0649 (18-91)||(8337-8410)
[»] scaffold0013 (1 HSPs)
scaffold0013 (51-106)||(41485-41540)
[»] scaffold0293 (1 HSPs)
scaffold0293 (43-105)||(3762-3824)
[»] scaffold0263 (1 HSPs)
scaffold0263 (51-105)||(22179-22233)
[»] scaffold0193 (1 HSPs)
scaffold0193 (36-106)||(21436-21506)
[»] scaffold0268 (1 HSPs)
scaffold0268 (44-85)||(21692-21733)


Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 462
Target Start/End: Complemental strand, 44887139 - 44886679
Alignment:
Q  1 acttctactctttaattaaa-gtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccaca 99  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||    
T  44887139 acttctactctttaattaaaagtataaacataaatatttgttacttttaaattataacaaatcaaactaatcatatttatctatttgaatgacatctaca 44887040  T
Q  100 atataacnnnnnnnntataatataaattcttatttttaatgacacgacaacaattattattatacgaaaaattatatttaagtgtatattcagggtaatg 199  Q
    |||||||        |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  44887039 atataacaaaaaaaatataatataaattcttatgtttaatgacacgacaacaattattattatacgaaaaattat--ttaagtgtatattcagggtaatg 44886942  T
Q  200 aaaaagttagtccaaagtcttctannnnnnngatgagatagaatccgttagtactagatatcaaaccttatattgataccaaatcgtagcccttaaaatt 299  Q
    ||||| |||||||||| |||||||       ||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  44886941 aaaaatttagtccaaaatcttctattttcttgatgagatagaatccgttgatactagatatcaaattttatattgatatcaaatcgtagcc-ttaaaatt 44886843  T
Q  300 cgattaatcaatggttcacaaattatgcggtttgtttccttttgattctcatgctannnnnnnctcttattttcatttgtgtgtgatgaatacattaatt 399  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  44886842 cgattaattaaaggttcacaaattatgcggtttgtttccttttgattctcatgctatttttttctcttattttcatttgtgtgtgatgaatacattaatt 44886743  T
Q  400 -atggtatcattcataccttctcccacgtcatttctcaaattatccatatctctcttcttcttc 462  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44886742 tatggtatcattcataccttctcccacgtcatttcccaaattatccatatctctcttcttcttc 44886679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 1748571 - 1748494
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||||||||||||| || |||| ||||| ||||||| | ||||||||||    
T  1748571 ataaatgtttgttgctttcaaattataacaaatcaaattaatcgtgattatttatttcaatgacaccaacaatataac 1748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 34729338 - 34729261
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||| |||||||||||| ||| |||| |||||||||| ||||||||| ||||||||||    
T  34729338 ataaatgtttgttgctttcaaattgtaacaaatcaaactaaccatgattatctatttaaatgacatcaacaatataac 34729261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 4998358 - 4998271
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||| |||||||||| ||||||| | |||||||||    
T  4998358 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccatgattatctatttcaatgacaccaacaatataa 4998271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 38175016 - 38175093
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || ||||||||||||||||||||||| |||||||| |||||||||| ||||| | | ||||||||||    
T  38175016 ataaatgttttttgctttcaaattataacaaatcaaactaatcatgattatctatttcaatgaaaccgacaatataac 38175093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 7629005 - 7629077
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatg 90  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  7629005 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaatcatgattatctatttcaatg 7629077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 23160911 - 23160999
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| ||||||||||||||||||||||| || |||  |||||||||||||| ||||| ||  ||||||||||    
T  23160911 aaagtaaaaatataaatgttttttactttcaaattataacaaatcgaactaactatgtttatctatttcaatgaaataaacaatataac 23160999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 8790955 - 8790880
Alignment:
Q  31 aaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||| |||||| ||||||| ||||||||||||||| ||| |||| |||||||||  ||||||||| ||||||||||    
T  8790955 aaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctattccaatgacatcaacaatataac 8790880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 48103598 - 48103653
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatt 84  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  48103598 ataaatgtttgttgctttcaaattataacaaatcaaactaatcatgattatctatt 48103653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 21028408 - 21028498
Alignment:
Q  16 ttaaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||  ||||| ||||||  | |||||||||||||||||||| ||||  ||||||||||||| ||||||| | || |||||||    
T  21028408 ttaaagtataaatgtaaatttttgttgatgtcaaattataacaaatcaaactaatgttgtttatctatttcaatgacaccaacgatataac 21028498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 39389688 - 39389570
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| ||| || ||||||||||||| ||||||||||||| |||| ||||| |||| ||||| | | ||||||||||        |||    
T  39389688 aaagtaaaaatataaatgttttttcctttcaaattatatcaaatcaaattaaccatgattatccatttcaatgaaaccaacaatataacaaaaaaaatat 39389589  T
Q  118 aatataaattcttattttt 136  Q
    ||| |||||||||||||||    
T  39389588 aatctaaattcttattttt 39389570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 7415974 - 7415897
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  ||||||||||||||| |||||| ||| |||| |||||||||| ||||||||  ||||||||||    
T  7415974 ataaatatttgttgttttcaaattataacagatcaaactaaccatgattatctatttcaatgacataaacaatataac 7415897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 27513269 - 27513346
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||  ||| |||||||| |||| ||||| ||||||| | ||||||||||    
T  27513269 ataaatgtttgttcctttcaaattataacaaactaaactaatcatgattatttatttcaatgacaccaacaatataac 27513346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 35213859 - 35213923
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||| ||||||||||||||||||  ||||||| |||| |||||||||| |||||||    
T  35213859 ataaatgtttgttgctttcaaattataacaaactaaattaaccatgattatctattttaatgaca 35213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 19397201 - 19397095
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataatataaattct 129  Q
    ||||| ||| || ||||||||| ||||||||||||| ||| |||| |||||||||| ||||| | | ||||||||||        |||||| ||||||||    
T  19397201 taaatgttttttgctttcaaatcataacaaatcaaactaaccatgattatctatttcaatgaaaccaacaatataacaaaaaaaatataatctaaattct 19397102  T
Q  130 tattttt 136  Q
    |||||||    
T  19397101 tattttt 19397095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 31015428 - 31015510
Alignment:
Q  21 gtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatat 103  Q
    ||||||| |||||| |||||| | |||||||||||||||| |||| | |||||| |||||||||| || |||| | |||||||    
T  31015428 gtataaatataaatgtttgttgcattcaaattataacaaaccaaacttatcatgattatctattttaacgacaccaacaatat 31015510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 46759528 - 46759605
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||| ||| ||||||||||||||| ||| |||| |||||||||| ||| ||| | ||||||||||    
T  46759528 ataaatgtttgttgcttacaagttataacaaatcaaactaaccatgattatctatttcaattacaccaacaatataac 46759605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 19008312 - 19008400
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| ||||||  ||||| | |||||||| |||||||  ||| ||| ||||||||||||||| ||||||| | ||||||||||    
T  19008312 aaagtaaaaatataaatgcttgttgcattcaaattgtaacaaaataaactaaccatgtttatctatttcaatgacaccaacaatataac 19008400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 21766106 - 21766194
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| ||  |||||||||||||||||||||| ||| |||| || ||||||| ||||| | | ||||||||||    
T  21766106 aaagtaaaaatataaatattttttgttttcaaattataacaaatcaaactaaccatgattgtctatttcaatgaaaccaacaatataac 21766194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 16842288 - 16842241
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaa 69  Q
    |||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  16842288 tataaatataaatgtttgttattttcaaattataacaaatcaatttaa 16842241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 15971170 - 15971120
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    ||||||||||||||||||||||| ||| |||| |||| ||||| |||||||    
T  15971170 ctttcaaattataacaaatcaaactaaccatgattatatatttaaatgaca 15971120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 23051021 - 23050943
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatc-aaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||| ||||||| |||||||||| | ||| |||||||| |||| ||||| ||| ||| | ||||||||||    
T  23051021 ataaatctttgttgctttcaagttataacaaaccaaaactaatcatgattatttatttcaataacaccaacaatataac 23050943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 43066872 - 43066810
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||||||| ||| |||  || ||||||| || |||||| ||||||||||    
T  43066872 tttcaaattataacaaatcaaactaaccataattttctatttcaacgacatcaacaatataac 43066810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 48109784 - 48109706
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaa-attaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || |||||||||||||||||||||| |||| ||| | |||||||||| ||||| ||  ||||||||||    
T  48109784 ataaatttttttttctttcaaattataacaaatcaagattagtcacgattatctatttcaatgaaattaacaatataac 48109706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 1787111 - 1786979
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataatataaattc 128  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||| |||| ||||  |||||||   |||||||||         |||||| |||||||    
T  1787111 ataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatttattctaatgacactaacaatataa-aaaatatatataatctaaattc 1787013  T
Q  129 ttatttttaatgaca-cgacaacaattattatta 161  Q
    || |||||||||||| | ||||||||| ||||||    
T  1787012 ttttttttaatgacaccaacaacaatttttatta 1786979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 9334858 - 9334781
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||| |||||||||||||||||| |||  ||  |||| ||||| ||||||| | ||||||||||    
T  9334858 ataaatgtttgttgcttttaaattataacaaatcaaactaaatataattatttatttcaatgacaccaacaatataac 9334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 10199191 - 10199232
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    ||||||||||||| |||||||||||| || ||||||||||||    
T  10199191 tttcaaattataataaatcaaattaaccacgtttatctattt 10199232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 20055791 - 20055714
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  ||| |||| ||||||||||||| ||| |||| |||||||||| |||||||   ||||||||||    
T  20055791 ataaatgtttgttgttttaaaatcataacaaatcaaactaaccatgattatctatttcaatgacactaacaatataac 20055714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 30240754 - 30240827
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    |||||| |||||||||||||| ||||||  ||||||| ||| |||| |||||||||| || |||| | ||||||    
T  30240754 ataaatatttgttactttcaagttataaagaatcaaactaaccatgattatctatttcaacgacaccgacaata 30240827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 35446540 - 35446617
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatg-tttatctatttgaatgacatccacaatataac 106  Q
    ||||| ||||||||||||||||||||||||| |||| |||  ||| || || ||||| ||||||| | ||||||||||    
T  35446540 taaatgtttgttactttcaaattataacaaaccaaactaactatgattaatttatttcaatgacaccaacaatataac 35446617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 39779215 - 39779138
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| | ||| ||||| ||||||||||||||| |||| |||||||||| |||  || | ||||||||||    
T  39779215 ataaatgtttgttgcattctaattacaacaaatcaaattaagcatgattatctattttaatatcaccaacaatataac 39779138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 40356152 - 40356083
Alignment:
Q  37 ttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||| ||||||||||||||| |||   ||||||||| ||| |||||  || ||||||||||    
T  40356152 ttgttactttcaagttataacaaatcaaactaacattgtttatcttttttaatgaattcaacaatataac 40356083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 42963217 - 42963294
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || ||||||||||||||||||||||| ||| |||  |||||||||| ||| | ||| ||| ||||||    
T  42963217 ataaatgttttttgctttcaaattataacaaatcaaactaaccataattatctatttcaattaaatcaacactataac 42963294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 581964 - 582028
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||| ||||||| ||||||||||| |||  || |||| |||||||||| |||||||    
T  581964 ataaatgtttgttgctttcaagttataacaaataaaacgaaccatgattatctattttaatgaca 582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 789114 - 789166
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatct 81  Q
    |||||| |||||| ||||||||||||||||||  ||||||| ||| |||||||    
T  789114 ataaatgtttgttgctttcaaattataacaaactaaattaaccatatttatct 789166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24060024 - 24060092
Alignment:
Q  23 ataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    ||||| |||||| || |||||||||  ||||||||||| |||| || |||| ||||||||||| |||||    
T  24060024 ataaatataaatgttcgttactttcggattataacaaaccaaaatagtcatatttatctatttcaatga 24060092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 39465986 - 39465910
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| ||||||  |||||||||||||||||  ||| ||| |||| |||||||||| ||| ||| | |||||||||    
T  39465986 ataaatatttgttgttttcaaattataacaaactaaactaaccatgattatctatttcaatcacaccaacaatataa 39465910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 41383869 - 41383928
Alignment:
Q  45 ttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||| ||||| ||||||| |||||||| |||||| ||||||||| ||| |||||    
T  41383869 ttcaaattatagcaaattaaattaaccatgttta-ctatttcaatgacatcaacagtataa 41383928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 13766054 - 13765897
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||||||| ||||||  |||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||| | ||||||||||        |||    
T  13766054 aaagtataaatataaatgattgttactttcaaattataacaaagcaaactaatcttgtttatctatttcaatgacaccaacaatataacaaaaaaaatat 13765955  T
Q  118 aatataaattctta--tttttaatgaca-cgacaacaattattattatacgaaaaatt 172  Q
    ||| ||||||||||  |||||||||||| | | |||||| |||||||||  |||||||    
T  13765954 aatctaaattcttatctttttaatgacaccaataacaatcattattatagaaaaaatt 13765897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 1170662 - 1170578
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||| |||||||||| |||| ||| |||| |||||||||| ||||||||| ||||||||||    
T  1170662 tataaatataaatatttgttactttcaagttataacaaaccaaactaaccatgattatctatttcaatgacatcaacaatataac 1170578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 14876755 - 14876842
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||| | | |||| ||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||| ||||||||||    
T  14876755 aaagtatagatagaaatgtttgttattttcaaattataacaaactaaattaatcatg-ttatatatttgaatgacatcgacaatataac 14876842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 34180206 - 34180144
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| || |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  34180206 ataaatattttttgctttcaaattataacaaatcaaattaatcatgattatctatttcaatga 34180144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 30800517 - 30800594
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||| | ||||||||||||||| ||| |||| |||||||||| ||||||||| ||||||||||    
T  30800517 ataaatgtttgttgctttcgagttataacaaatcaaactaaccatgattatctatttcaatgacatcaacaatataac 30800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 18638365 - 18638289
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||||| |||| ||||| ||||||| | |||||||||    
T  18638365 ataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatttatttcaatgacaccaacaatataa 18638289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 4430126 - 4430203
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||| |||| ||||| ||||||| | ||||||||||    
T  4430126 ataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatatattttaatgacaccaacaatataac 4430203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 41666665 - 41666742
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||| ||||||||||||| |||| ||| |||  |||||||||| ||||||||| ||||||||||    
T  41666665 ataaatgtttgttgctttaaaattataacaaaccaaaataaccataattatctatttcaatgacatcaacaatataac 41666742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 11929537 - 11929625
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| |||||| | |||||||||||||||| |||| ||| ||||||||| ||||| | ||||| | ||||||||||    
T  11929537 aaagtaaaaatataaatgtttgttgcattcaaattataacaaaccaaaataaccatgtttatttatttcattgacaacaacaatataac 11929625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 13755316 - 13755228
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||| ||||||  ||||||| ||||||||| | |||| |||| ||||||||||||||||||| ||| ||| | | ||||||||    
T  13755316 aaagtataaatataaatgattgttacattcaaattaaatcaaaacaaactaatcatgtttatctatttcaataacaccaataatataac 13755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 29039245 - 29039333
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||| ||||||   |||||||||||||||||||||||| |||| ||||  | ||||||||||| || |||| | ||||||||||    
T  29039245 aaagtataatcataaacgattgttactttcaaattataacaaaccaaactaattttatttatctatttcaacgacaccaacaatataac 29039333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 30264136 - 30264200
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||||||||||| ||||||||||||||| ||| |||| |||| ||||| |||||||    
T  30264136 ataaatgtttgttactttcaagttataacaaatcaaactaaccatgattatttatttcaatgaca 30264200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 32173151 - 32173095
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||| |||| |||||    
T  32173151 ataaatgtttgttactttcaagttataacaaatcaaactaatcatgattatttattt 32173095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 9107123 - 9107186
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||| |||||||| |||||||| |||||||||| ||||| ||| | ||||||||    
T  9107123 ctttcaaattataataaatcaaactaatcatgattatctatttcaatgatatcaataatataac 9107186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 9503136 - 9503081
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatt 84  Q
    |||||| |||||| |||||||||||||||||| |||||||| |||| |||||||||    
T  9503136 ataaatatttgttgctttcaaattataacaaaccaaattaaccatgattatctatt 9503081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8511974 - 8512047
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||  |||||||||| |||||    
T  8511974 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccataattatctatttcaatga 8512047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8514014 - 8514087
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||  |||||||||| |||||    
T  8514014 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccataattatctatttcaatga 8514087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 11352965 - 11352888
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||  |||| ||||| ||||||| | ||||||||||    
T  11352965 ataaatgtttgttgctttcaagttataacaaatcaaactaaccattattatatatttcaatgacaccaacaatataac 11352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 11904172 - 11904099
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    |||||| |||||| |||||||||||||| |||||||| |||||||| ||| |||||| || |||| | ||||||    
T  11904172 ataaatgtttgttgctttcaaattataaaaaatcaaactaatcatgattaactatttcaacgacaccgacaata 11904099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 12470960 - 12471037
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||||||||| | |||||||||| |||| |||||||| |||| ||||| ||||||  | ||||||||||    
T  12470960 ataaatttttgttactttcgagttataacaaaccaaactaatcatgattatttattttaatgacgccaacaatataac 12471037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 45489143 - 45489055
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| ||  ||||||| |||||||||||||| ||| |||| |||||||||| ||||| | | ||||||||||    
T  45489143 aaagtaaaaatataaatgttttttgttttcaaaatataacaaatcaaactaaccatgattatctatttcaatgaaaccaacaatataac 45489055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 30682613 - 30682550
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||| |||||||||||||||||| ||| |||| |||||||||| ||| ||| | ||||||||||    
T  30682613 ctttaaaattataacaaatcaaactaaccatgattatctatttaaataacaccaacaatataac 30682550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 45440810 - 45440747
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    ||||| ||||||  |||||| ||||||||||||||| ||| |||| |||||||||| |||||||    
T  45440810 taaatgtttgttgttttcaagttataacaaatcaaactaaccatgattatctatttcaatgaca 45440747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 2079287 - 2079329
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||    
T  2079287 ctttcaaattataacaaatcaaactaaccatgattatctattt 2079329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 7020091 - 7020030
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||||| |||||||| ||| |||| |||||||||| ||||| | | |||||||||    
T  7020091 tttcaaattataaaaaatcaaactaaccatgattatctatttcaatgaaaccaacaatataa 7020030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8517785 - 8517858
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||  |||| ||||| |||||    
T  8517785 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccataattatatatttcaatga 8517858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 13369218 - 13369295
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || |||||||||||||||||| |||| |||  ||| |||||||||| |||||||   ||||||||||    
T  13369218 ataaatgtttattgctttcaaattataacaaaccaaactaacgatgattatctatttcaatgacacaaacaatataac 13369295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 35457253 - 35457330
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| ||||||| || |||||||||||||||  ||||||| |||| ||||| ||| ||| | ||||||||||    
T  35457253 ataaatatttattacttttaagttataacaaatcaaacgaatcatgattatttatttcaataacaccaacaatataac 35457330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 45356397 - 45356446
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||||||||||||||||||| ||| |||| |||| ||||| |||||||    
T  45356397 tttcaaattataacaaatcaaactaaccatgattatttatttcaatgaca 45356446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 4536111 - 4536037
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||| || |||||||||||||||| |||||| |||  ||||||||||| || ||||||| | ||||||||||    
T  4536111 taaatcttt-ttgctttcaaattataacacatcaaactaactatgtttatcta-ttcaatgacaccaacaatataac 4536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 12542562 - 12542650
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| ||||||  ||||| | ||||||||||||||||  ||| ||| ||| ||||||||||| | ||||| | ||||||||||    
T  12542562 aaagtaaaaatataaatgcttgttgcattcaaattataacaaactaaactaaccatttttatctatttcagtgacaccaacaatataac 12542650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 15044199 - 15044255
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||| |||||||||||| |||| ||| |||| ||||||||||    
T  15044199 ataaatgtttgtttctttccaattataacaaaccaaactaaccatgattatctattt 15044255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 24852625 - 24852569
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| |||||||||||||||||   ||| |||||||| ||||||||||    
T  24852625 ataaatgtttgttgctttcaaattataacaatctaaactaatcatgattatctattt 24852569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 10587621 - 10587559
Alignment:
Q  31 aaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10587621 aaatgtttgttactttcaaattataacaaaccaaattaatcatgtttatctatttgaatgaca 10587559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 33573632 - 33573559
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  33573632 aaagtaaaaatataaatattttttgctttcaaattataacaaatcaaactaatcatgtttatctatttcaatga 33573559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 22837553 - 22837476
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||||| |||||| ||| |||| |||||||||| ||||||| | ||||||||||    
T  22837553 ataaatttttgttgctttcaaattataacacatcaaactaaccatgattatctatttcaatgacaccaacaatataac 22837476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 3833799 - 3833876
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||| ||||||||||||||| ||| |||| |||||||||| ||||||| | ||||||||||    
T  3833799 ataaatgtttgttgttttcaagttataacaaatcaaactaaccatgattatctatttcaatgacaccaacaatataac 3833876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 1190668 - 1190612
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  1190668 ataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatctattt 1190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 26252864 - 26252928
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||| |||||||||| |||||||    
T  26252864 ataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctatttcaatgaca 26252928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 31861999 - 31861923
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| |||||| ||||||| ||||||||||| ||||||| |||| |||| ||||| ||||||| | |||||||||    
T  31861999 ataaatgtttgttgctttcaagttataacaaattaaattaaccatgattatatatttcaatgacaccaacaatataa 31861923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3103693 - 3103763
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaa 88  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| || | |||||||||||||    
T  3103693 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccaggattatctatttgaa 3103763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 12169809 - 12169879
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||||||| | ||| | | ||||||||||    
T  12169809 tttgttgctttaaaattataacaaatcaaactaatcatgattatctatttcattgaaaccaacaatataac 12169879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 21104725 - 21104599
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| ||||||  || || |||||||||||||| |||| |||  || |||| |||||||||| ||||||| | ||||||||||        |||    
T  21104725 aaagtaaaaaaataaatgatttttcctttcaaattataaaaaattaaaacaaacatgattatctatttcaatgacaccaacaatataacaaaaaaaatat 21104626  T
Q  118 aatataaattcttatttttaatgacac 144  Q
    ||||||||||||| ||||| |||||||    
T  21104625 aatataaattctttttttttatgacac 21104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 34638140 - 34638078
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||||||| ||| |||| |||||||||| ||||||| | ||||| ||||    
T  34638140 tttcaaattataacaaatcaaactaaccatgattatctatttcaatgacaccaacaatgtaac 34638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 6877212 - 6877135
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||||||||| |||||||||||||   ||||||| ||||| ||||||| | ||||||||||    
T  6877212 ataaatgtttgttgttttcaaattatatcaaatcaaattaactttgtttatttatttcaatgacaccaacaatataac 6877135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 12185032 - 12184952
Alignment:
Q  25 aaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||| |||||| |||| || ||||||||||||||| |||  ||| |||||||||| ||||||| | ||||||||||    
T  12185032 aaacataaatgtttgttgcttt-aagttataacaaatcaaactaacaatgattatctatttcaatgacaccaacaatataac 12184952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 172811 - 172886
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatata 104  Q
    |||||| |||||| ||||||  ||||||||||||||| ||| |||| |||| ||||| ||||||| | ||||||||    
T  172811 ataaatgtttgttgctttcatgttataacaaatcaaactaaccatggttatatatttcaatgacaccaacaatata 172886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 9894351 - 9894414
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||||| ||| ||  |||| |||||||||| ||||||| | ||||||||||    
T  9894351 ctttcaaattataacaaattaaactacccatgattatctatttcaatgacaccaacaatataac 9894414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 10266864 - 10266951
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||||| | |||||| |||||||||||||||||||||||||  ||| |||  |  ||||||||||| | ||||| | |||||||||    
T  10266864 aaagtatatatataaatgtttgttactttcaaattataacaaactaaactaactagctttatctatttcagtgacaccaacaatataa 10266951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 4075831 - 4075908
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || |||| |||||||||||||||||| |||  ||  |||||||||||||||| | | ||||||||||    
T  4075831 ataaatattttttgcttttaaattataacaaatcaaactaacgataattatctatttgaatgaaaccaacaatataac 4075908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 11646691 - 11646614
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||  ||||||| |||  |||||||||  ||||||  | ||||||||||    
T  11646691 ataaatgtttgttgctttcaaattataacaaactaaattaaccattattatctattccaatgacggcaacaatataac 11646614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 30233434 - 30233373
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatata 104  Q
    ||||||||||||||||||| ||| ||| |||| |||||||||| ||||| | | ||||||||    
T  30233434 ctttcaaattataacaaataaaactaaccatgattatctatttcaatgaaaccaacaatata 30233373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 32349300 - 32349377
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||| ||||||| |||||||||||  ||| | |||| |||||||| |||||||||| ||||||| | || |||||||    
T  32349300 ataaacctttgttgctttcaaattactacagaccaaactaatcatggttatctatttcaatgacaccgaccatataac 32349377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 6875041 - 6875097
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||||||||| || |||||||| |||||||  ||||||||||    
T  6875041 ataaatgtttgttgctttcaaattaaaataaatcaaactaatcattgttatctattt 6875097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 14426788 - 14426740
Alignment:
Q  42 actttcaaattataacaaatcaaattaatcatgtttatctatttgaatg 90  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||| ||||    
T  14426788 actttcaaattataacaaatcaaactaaccatgattatatatttaaatg 14426740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 14965385 - 14965309
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| |||||| ||||||| ||||||||||||||| |||  ||  |||||||||| ||||| | | |||||||||    
T  14965385 ataaatgtttgttgctttcaagttataacaaatcaaactaactattattatctatttcaatgaaaccaacaatataa 14965309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 26538520 - 26538464
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| || ||| ||||||| ||||||||||||||| ||| |||| ||||||||||    
T  26538520 ataaatgttagttgctttcaagttataacaaatcaaactaaccatgattatctattt 26538464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 30592065 - 30591977
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||||||  ||||  |||||||||||||||| ||| | |||| |||||||| ||||||| | ||| ||||||    
T  30592065 aaagtaaaaatataaatgtttgttgttttcctattataacaaatcaaactaaccgtgttcatctatttcaatgacaccaacagtataac 30591977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 1584906 - 1584994
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||| |||||| |||||||||||||||||| |||||| |||| |||  |||||||||||||| ||||||||  ||||||||||    
T  1584906 aaagtataaatataaatgtttgttactttcaaattaaaacaaaacaaactaacaatgtttatctatttcaatgacattaacaatataac 1584994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 36700951 - 36700825
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| |||||||||||||||||| ||||| | ||||||| |||| |||||||||| ||||| | | ||||||||||        |||    
T  36700951 aaagtaaaaatataaatatttgttactttcaaattaaaacaattaaaattaaccatgattatctatttcaatgaaaccaacaatataacaaaaaatatat 36700852  T
Q  118 aatataaattcttatttttaatgacac 144  Q
    ||| ||||||||| |||||||||||||    
T  36700851 aatttaaattcttttttttaatgacac 36700825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 40716372 - 40716302
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||| ||||||||||||||| |||||||| |||||||||| ||||||| | ||||||||||    
T  40716372 tttgtttctttcaagttataacaaatcaaactaatcatgattatctatttcaatgacaccaacaatataac 40716302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 2530396 - 2530320
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| |||||| |||| ||||||||||||| |||| ||||| || |||||||||| ||||||||| |||||||||    
T  2530396 ataaatgtttgttgcttttaaattataacaaaccaaactaatcgtgattatctatttcaatgacatctacaatataa 2530320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 36092253 - 36092341
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| | | || ||||||||||||||||||||||||||| |||| |||||||||| ||||| | | ||||||||||    
T  36092253 aaagtaaaaatataaatgtcttttgctttcaaattataacaaatcaaattaaccatgattatctatttcaatgaaaccaacaatataac 36092341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 8942753 - 8942830
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||| | |||| ||||| ||||||| | ||||||||||    
T  8942753 ataaatatttgttgctttcaagttataacaaatcaaactaatcaagattatttatttcaatgacaccaacaatataac 8942830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 15341905 - 15341844
Alignment:
Q  45 ttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||| ||| ||||||| ||||||||||| || |||||| ||||||||||    
T  15341905 ttcaaattataacaaattaaactaatcatatttatctatttcaacgacatcaacaatataac 15341844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 1591888 - 1591821
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatata 104  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||||||| ||||||| | ||||||||    
T  1591888 tttgttacttt-aaattataacaaagcaaactaaccatgtttatctatttcaatgacagcaacaatata 1591821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 23270828 - 23270740
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || ||| |||||| ||||||||||||||||||||||  |||| ||| |||||||||| ||| | ||| ||||||||||    
T  23270828 aaagtaaaaatattaatgtttgttgctttcaaattataacaaatcaatctaatgatgattatctatttcaattaaatcaacaatataac 23270740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 30332106 - 30332018
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| ||||||  || ||| |||||||||||||||||||||| |||||| |  |||| |||| ||||||||| ||||||||||    
T  30332106 aaagtaaaaatataaattctttttaatttcaaattataacaaatcaaactaatcacgactatccatttcaatgacatcaacaatataac 30332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 7648956 - 7649081
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| ||| || |||| |||||||||||||||||| |||||| | ||||||||||  |||| | | ||||||||||         ||    
T  7648956 aaagtaaaaatataaatattttttgcttttaaattataacaaatcaaactaatcaggattatctatttcgatgaaaccaacaatataacaaaaaaaa-at 7649054  T
Q  118 aatataaattcttatttttaatgacac 144  Q
    ||||||||||||| |||||||||||||    
T  7649055 aatataaattcttttttttaatgacac 7649081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 17064691 - 17064757
Alignment:
Q  40 ttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||| |||||||| |||||||| |||||| ||| ||||| | | ||||||||||    
T  17064691 ttactttcaaattataaaaaatcaaactaatcatgattatctgtttcaatgaaaccaacaatataac 17064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 5026357 - 5026280
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| | |||||||||||||||| ||||  ||||||| |||||||||| ||||||| | | ||||||||    
T  5026357 ataaatgtttgttgcattcaaattataacaaaccaaacgaatcatgattatctattttaatgacaccaataatataac 5026280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 31364159 - 31364216
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    ||||||||||| ||||||||| ||||| ||| |||||||||||| ||||| |||||||    
T  31364159 tttgttacttttaaattataaaaaatctaataaatcatgtttatatatttcaatgaca 31364216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 32234499 - 32234572
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||| |||| ||||| || |||| | ||||||    
T  32234499 ataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatttatttcaacgacaccgacaata 32234572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 38162284 - 38162361
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||| ||| |||| |||||||| |||| ||||| |||||||   ||||||||||    
T  38162284 ataaatgtttgttgctttcaaattataataaaacaaactaatcatgattatttatttcaatgacactaacaatataac 38162361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 5769876 - 5769828
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||||| |||||||||||||| |||||||| |||||||||| |||||    
T  5769876 ctttcaaactataacaaatcaaactaatcatgattatctatttcaatga 5769828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16313142 - 16313066
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacat 94  Q
    |||||| ||| ||||||  || || |||||||| |||||||||||||| ||| |||| |||||||||| ||||||||    
T  16313142 aaagtaaaaatataaatgctttttgctttcaaaatataacaaatcaaactaaccatgattatctatttcaatgacat 16313066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19929609 - 19929537
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatg 90  Q
    |||||| ||| |||||| ||||||  |||||  |||||| ||||||||||||||||| |||||||||| ||||    
T  19929609 aaagtaaaaatataaatgtttgttgttttcacgttataaaaaatcaaattaatcatgattatctatttcaatg 19929537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 1093988 - 1093901
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| ||| ||||||  || || |||||||||||||| |||||||| ||  |||| |||||||||| ||||||| | |||||||||    
T  1093988 aaagtaaaaatataaatgatttttgctttcaaattataaaaaatcaaactacccatgattatctatttcaatgacaccaacaatataa 1093901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 41613178 - 41613131
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||||||||||||||||||| |||| |||||||||| |||||    
T  41613178 tttcaagttataacaaatcaaattaaccatgattatctatttaaatga 41613131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 42207999 - 42207932
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| |||||| ||| ||  |||||||||||||||||||||| |||| ||| ||||||||||    
T  42207999 aaagtaaaaatataaatattttttgttttcaaattataacaaatcaaactaataatgattatctattt 42207932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 10543152 - 10543090
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||||||| ||||||||  ||| ||||| ||||||  | ||||||||||    
T  10543152 tttcaaattataacaaatcaaactaatcatgaatatttatttcaatgacgccaacaatataac 10543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 41863005 - 41862939
Alignment:
Q  40 ttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||| |||||||||||||||||||||| |||| |||  ||||| ||||| | | ||||||||||    
T  41863005 ttacttttaaattataacaaatcaaattaaccatgattacatatttcaatgaaaccaacaatataac 41862939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 24836922 - 24836845
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| |||  |||  ||||||| | ||||||| | ||||||||||    
T  24836922 ataaatgtttgttgctttcaagttataacaaatcaaactaactatgaatatctatatcaatgacaccaacaatataac 24836845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 31314413 - 31314470
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    ||||||||||||||||||||| ||||| ||  || ||||||||| ||||| |||||||    
T  31314413 tttgttactttcaaattataaaaaatctaacaaaccatgtttatatatttcaatgaca 31314470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 36526626 - 36526553
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| ||||||  || || ||||||||||||||||||||||| ||  |||| |||||||||| |||||    
T  36526626 aaagtaaaaatataaatgatttttgctttcaaattataacaaatcaaactacccatgattatctatttcaatga 36526553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 42097645 - 42097568
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||| ||||||||||||||| ||| |||| ||||| ||||  |||||| | ||||||||||    
T  42097645 ataaatgtttgttgttttcaatttataacaaatcaaactaaccatgattatcaattttcatgacaccaacaatataac 42097568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 832333 - 832277
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||||||  |||||| ||||||||||| ||||||| ||||||||| |||||    
T  832333 ataaatatttgttgttttcaagttataacaaattaaattaaacatgtttatttattt 832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 16312648 - 16312592
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| ||| ||| ||||||||||||| ||||||||||||| |||| |||||    
T  16312648 ataaatatttattatttttaaattataacaaaccaaattaatcatgattatatattt 16312592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 38455392 - 38455448
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| |||||||||||||| |||||||| |||  ||| ||||||||||    
T  38455392 ataaatgtttgttgctttcaaattataaaaaatcaaactaactatgattatctattt 38455448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 11409154 - 11409078
Alignment:
Q  15 attaaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    ||||||||| ||| |||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||    
T  11409154 attaaagtaaaaatataaatgtttgttactttcaaattaaaacaaatcaaactaatcatgattatctatttaaatga 11409078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 48715778 - 48715920
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataata 121  Q
    |||||| |||||| |||||||||||||| |||||| ||| |||| |||||||| |||| ||||| ||||||| | ||||||||||        ||||||     
T  48715778 tataaatataaatgtttgttactttcaagttataaaaaaccaaactaatcatgattatttatttcaatgacaccaacaatataaccaaaaaaatataatt 48715877  T
Q  122 taaattcttatttttaatgaca-cgacaacaattattattata 163  Q
    ||||||||| |||||||||||| | ||||| || |||||||||    
T  48715878 taaattcttttttttaatgacatcaacaacgatcattattata 48715920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 33326683 - 33326760
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||| ||| |||||||| |||||||||| ||||||| | | ||||||||    
T  33326683 ataaatatttgttgctttcaaattataacaaataaaactaatcatgattatctatttcaatgacaccaataatataac 33326760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 10388343 - 10388283
Alignment:
Q  45 ttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||    
T  10388343 ttcaaattataacaaatcaaattaaccatgattatctatttcaatgaaatcaacaatataa 10388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 12267208 - 12267145
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||| |||||||||||||||||| |||||||| |||||||||| ||||||| | ||||||||||    
T  12267208 cttttaaattataacaaatcaaactaatcatgattatctatttcaatgacaccaacaatataac 12267145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 43415888 - 43416025
Alignment:
Q  37 ttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataatataaattcttat--tt 134  Q
    ||||| |||||||| ||||||||| || | ||||||||||||||||||| ||||||||  ||||||| ||        |||||| |||||||||||  ||    
T  43415888 ttgttgctttcaaactataacaaaccacactaatcatgtttatctatttcaatgacataaacaatattac-aaaaaaatataatctaaattcttatcatt 43415986  T
Q  135 ttaatgaca-cgacaacaattattattatacgaaaaatta 173  Q
    ||||||||| | |||||||||||||||||| |||||||||    
T  43415987 ttaatgacaccaacaacaattattattata-gaaaaatta 43416025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 115794 - 115871
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| | ||||||||||||| |||||||| |||| ||||| ||||||| | ||||||||||    
T  115794 ataaatgtttgttgctttcaagtaataacaaatcaaactaatcatgattatatatttcaatgacaccaacaatataac 115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 5935706 - 5935565
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataatataaattc 128  Q
    |||||| |||||| ||||||| ||||| ||||||||||||| |||  |||||||||| ||| ||| | |||||||||         |||||| |||||||    
T  5935706 ataaatgtttgttgctttcaagttatagcaaatcaaattaaccataattatctatttcaataacaccaacaatataataaaaaaaatataatctaaattc 5935607  T
Q  129 ttatttttaatgacac-gacaacaattattattatacgaaaa 169  Q
    || |||||||| ||||  ||||||||| |||||||| |||||    
T  5935606 ttttttttaataacacaaacaacaatttttattatatgaaaa 5935565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35547077 - 35547150
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||| ||| |||||||| |||||||||| |||||    
T  35547077 aaagtaaaaatataaatgttttttgctttcaaattataacaaattaaactaatcatgattatctatttcaatga 35547150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 44667889 - 44667812
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||||||||||||||||||| ||| |||| ||||||||||  |||||| | ||||||||||    
T  44667889 ataaatgtttgttgttttcaaattataacaaatcaaactaaccatgattatctatttcgatgacaccaacaatataac 44667812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 19275107 - 19275016
Alignment:
Q  15 attaaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| || ||| |||||| |||||| |||||||  |||||||||  |||||||||||| |||| ||||| ||||||| | ||||||||||    
T  19275107 attaaactaaaaatataaatgtttgttgctttcaagctataacaaaaaaaattaatcatgattatttatttcaatgacaccaacaatataac 19275016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 42676857 - 42676794
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgac 92  Q
    |||||| |||||| |||| ||||||||||||||||||||||  ||| |||||||||| ||||||    
T  42676857 ataaatatttgtttcttttaaattataacaaatcaaattaactatgattatctatttcaatgac 42676794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 24561373 - 24561307
Alignment:
Q  40 ttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||||||||||| ||||  || |||||||||| ||||| | | ||||||||||    
T  24561373 ttactttcaaattataacaaatcaaactaattgtgattatctatttcaatgaaaccaacaatataac 24561307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 40808669 - 40808731
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| || |||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  40808669 ataaatgtttattgctttcaaattataacaaatcaaacaaatcatgattatctatttcaatga 40808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 50943797 - 50943859
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| || ||||||||||||||||||||||| |||||||| |||| ||||| |||||    
T  50943797 ataaatgtttttttctttcaaattataacaaatcaaactaatcatgattatatatttcaatga 50943859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 10172444 - 10172379
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacat 94  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||| ||||| |||| ||||||||    
T  10172444 ataaatgtttgttgctttcaatttataacaaatcaaactaaccatgattatccatttcaatgacat 10172379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 773885 - 773838
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  773885 tttcaaattataacaactcaaactaatcatgattatctatttcaatga 773838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8214185 - 8214118
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| |||||| ||| ||  |||||||||||||||||||||| |||| ||| ||||||||||    
T  8214185 aaagtaaaaatataaatattttttgatttcaaattataacaaatcaaactaattatgattatctattt 8214118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 11407486 - 11407424
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||||||||||| |||||||| |||| ||||| |||||||   ||||||||||    
T  11407486 tttcaagttataacaaatcaaactaatcatgattatttatttcaatgacacaaacaatataac 11407424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 27926587 - 27926517
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  ||||||||||||||| ||| |||| |||| ||||| ||||||| | ||||||||||    
T  27926587 tttgttgctttcattttataacaaatcaaactaaccatgattatatatttcaatgacaccaacaatataac 27926517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 31529877 - 31529919
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||    
T  31529877 ctttcaaattataacaaatcaaactaaccatgattatctattt 31529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 40368156 - 40368086
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||| ||||||||||||||||||| | ||  || ||||||||||| ||| ||||||| | ||||||||||    
T  40368156 tttgtgactttcaaattataacaaacccaacaaaccatgtttatctttttcaatgacaccaacaatataac 40368086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 4242222 - 4242157
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacat 94  Q
    |||||| ||||||  |||||| |||||||||||||||||||| ||| |||| ||||| || |||||    
T  4242222 ataaatgtttgttgttttcaagttataacaaatcaaattaatgatgattatttatttcaacgacat 4242157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 15476580 - 15476503
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||| ||||||||||||||| |||  ||| |||||||||| |||||||   ||||||||||    
T  15476580 ataaatgtttgttgttttcaagttataacaaatcaaactaactatgattatctatttcaatgacacaaacaatataac 15476503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 15597502 - 15597429
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||  ||||||| ||| |||| |||||||||| |||||    
T  15597502 aaagtaaaaatataaatgttttttgctttcaaattataatgaatcaaactaaccatgattatctatttcaatga 15597429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 28041574 - 28041501
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    |||||| || |||||||||||||||||| |||||||| ||| |||  |||||||||| || |||| | ||||||    
T  28041574 ataaatgttagttactttcaaattataaaaaatcaaactaaccatcgttatctatttcaacgacaccgacaata 28041501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 33475179 - 33475126
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatc 71  Q
    |||||||||| ||||||  ||||| |||||||||||||||||| |||| |||||    
T  33475179 aaagtataaatataaatgattgttgctttcaaattataacaaaccaaactaatc 33475126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 36604640 - 36604717
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || ||||||||||||||||||  ||| ||| |||| |||| ||||| ||||||| | ||||||||||    
T  36604640 ataaatgttttttgctttcaaattataacaaacaaaactaaccatgcttatatattttaatgacaccaacaatataac 36604717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 13315014 - 13315062
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||||||| |||||||||||| ||||| || |||||||||| |||||    
T  13315014 ctttcaaattttaacaaatcaaaataatcgtgattatctatttcaatga 13315062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 20906922 - 20906858
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| ||| || ||||||| ||||||||||||||| ||| | || |||||||||| |||||||    
T  20906922 ataaatgttttttgctttcaagttataacaaatcaaactaaccgtggttatctatttcaatgaca 20906858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 7438166 - 7438228
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  7438166 ataaatattttttactttcaaattataacaaatcaaattaatcatgattatctatttcaatga 7438228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 13781631 - 13781554
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||||| |||||||||| ||||||| | ||||||||||    
T  13781631 ataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatctatttcaatgacaccaacaatataac 13781554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27550968 - 27551041
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  27550968 aaagtaaaaatataaatattttttgctttcaaattataacaaatcaaattaatcatgattatctatttcaatga 27551041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 1397347 - 1397260
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||  |||||| ||| ||||||||    
T  1397347 aaagtaaaaatataaatgtttttttctttcaaattataacaaatcaaattaaccatgtttatctatttcgatgaca-ccaaaatataac 1397260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 30503297 - 30503210
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||||||| |||| |||||||||| ||||| | | |||||||||    
T  30503297 aaagtaaaaatataaatattttttgctttcaaattataacaaatcaaattaaccatgattatctatttcaatgaaaccaacaatataa 30503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 7391481 - 7391569
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||   ||||| ||||||||||||||||||| ||||||| | ||||||| ||||| |||||||   ||||||||||    
T  7391481 aaagtataaacataaacaattgttgctttcaaattataacaaattaaattaaccttgtttatatatttcaatgacactaacaatataac 7391569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 28808908 - 28808822
Alignment:
Q  21 gtataaacataaatctttgtt-actttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||| |||||| |||||| ||||||||||||||||||| |||| |||| |||||||| | |||||| |||| | ||||||||||    
T  28808908 gtataaatataaatgtttgtttactttcaaattataacaaaccaaactaatgatgtttatatgtttgaacgacaccgacaatataac 28808822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35034716 - 35034789
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| |||||| ||||| ||||||||||||||||||||| ||||  ||||||||| |||||    
T  35034716 aaagtaaaaatataaatgtttgttgctttcgaattataacaaatcaaattaaccatgaatatctatttcaatga 35034789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 17702485 - 17702561
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||||||||||  |||||| |||||||||| |||| |||||||| |||| ||||| ||||||| | |||||||||    
T  17702485 ataaatctttgttgttttcaagttataacaaaccaaactaatcatgattatttatttcaatgacaccgacaatataa 17702561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 37143234 - 37143290
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  37143234 ataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatctattt 37143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 33145193 - 33145118
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||| ||||||  ||| || |||||||||||||||||||||||  |||||||||| ||||||||  |||||||||    
T  33145193 taaatgtttgttgattttaagttataacaaatcaaattaatcataattatctatttaaatgacattaacaatataa 33145118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 49320391 - 49320466
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| ||| ||||||  || || ||||||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  49320391 aaagtaaaaatataaatgctttttgctttcaaattataacaaatcaaactaaccatgattatctatttcaatgaca 49320466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 52793656 - 52793719
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatc-atgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||||||||||||||||||| | || ||||||| ||| ||||||||| |||||||||    
T  52793656 ctttcaaattataacaaatcaaattaaacaatatttatctttttcaatgacatcaacaatataa 52793719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 894078 - 894001
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||||||| ||| |||| ||| |||||| | || || | ||||||||||    
T  894078 ataaatgtttgttgctttcaaattataacaaatcaaactaaccatgattaactatttcagtggcaccaacaatataac 894001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 10251699 - 10251622
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| | |||| ||||||||||||||||||||||||||| |||| ||||| |||| | ||||| | | ||||||||    
T  10251699 ataaatgtgtgttgctttcaaattataacaaatcaaattaaccatgattatccatttcattgacaccgataatataac 10251622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 26878541 - 26878598
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||||||||||||||| |||| ||| |||| |||||||||| |||||||    
T  26878541 tttgttgctttcaaattataacaaaccaaactaaccatgattatctatttcaatgaca 26878598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 23091229 - 23091285
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |||| ||||||||||    
T  23091229 ataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctattt 23091285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 32006439 - 32006491
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaat 70  Q
    |||||||||| ||||||  | ||| ||||||||||||||||||||||||||||    
T  32006439 aaagtataaatataaattatagttgctttcaaattataacaaatcaaattaat 32006491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 34659381 - 34659333
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||||||||||||||| |||| |||||||| |||||||||| |||||    
T  34659381 ctttcaaattataacaaaccaaactaatcatgattatctatttcaatga 34659333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 2179543 - 2179598
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||||||||  ||||||||||||  ||| ||||||||||||||||||| |||||    
T  2179543 tttgttacttttcaattataacaaaataaactaatcatgtttatctatttcaatga 2179598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 6788739 - 6788664
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| ||| |||||| ||| || |||| ||| ||||||||||||||||||  ||| |||||||||| |||||||    
T  6788739 aaagtaaaaatataaatgttttttgctttaaaaatataacaaatcaaattaacaatgattatctatttcaatgaca 6788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 10524274 - 10524349
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| ||| |||||| ||| || |||||||||||||| ||||||||  || |||| |||||||||| |||||||    
T  10524274 aaagtaaaaatataaatgttttttgctttcaaattataaaaaatcaaaacaaacatgattatctattttaatgaca 10524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 26088887 - 26088800
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||||||| ||||||  ||||| ||||||||| |||||||| |||| |||   |||||||||||||  |||||| | |||||||||    
T  26088887 aaagtataaatataaatgattgttgctttcaaatcataacaaaccaaactaactttgtttatctatttcgatgacaccaacaatataa 26088800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 554652 - 554714
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||||||||||| |||||||| ||| |||| | |||||||| ||||||| | |||||||||    
T  554652 ctttcaaattataataaatcaaactaaccatgatcatctatttcaatgacaccaacaatataa 554714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 37831076 - 37831030
Alignment:
Q  45 ttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  37831076 ttcaaattataacaactcaaactaatcatgattatctatttcaatga 37831030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 2290963 - 2291039
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||| || |||||||||||| || ||||||||  ||||||||| ||||||| | ||||||||||    
T  2290963 ataaatgtttgtttctttgaagttataacaaatc-aactaatcatgactatctatttcaatgacaccaacaatataac 2291039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6488259 - 6488222
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattata 55  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6488259 aaagtataaatataaatgtttgttactttcaaattata 6488222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 627982 - 627926
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||||||||| | |||||||||| |||||||| |||| |||| |||||    
T  627982 ataaatgtttgttactttctagttataacaaaccaaattaaacatgattatttattt 627926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 44470388 - 44470332
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||| | |||||||||| ||||||||||||| |||| |||||    
T  44470388 ataaatatttgttgctttctagttataacaaaccaaattaatcatgattatttattt 44470332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 275 - 348
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  275 aaagtaaaaatataaatattttttgctttcaaattataacaaatcaaactaatcatgtttatctatttcaatga 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 19039979 - 19039903
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||||| |||||||||| ||||||| | |||||||||    
T  19039979 ataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatctatttcaatgacaccaacaatataa 19039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 36080394 - 36080240
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||  |||||||||| ||||| | | ||||||||||        |||    
T  36080394 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccataattatctatttcaatgaaaccaacaatataac-aaaaaaatat 36080296  T
Q  118 aatataaattcttatttttaatgaca-cgacaacaattattattatacgaaaaatt 172  Q
    ||| |||||||||||||||||||||| | ||||||||  ||||||||  |||||||    
T  36080295 aatctaaattcttatttttaatgacaccaacaacaatctttattatagaaaaaatt 36080240  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 27359945 - 27360020
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatata 104  Q
    |||||| ||||||  |||||| |||||||||||||||||||||||| |||| ||||| ||||||| | ||||||||    
T  27359945 ataaatgtttgttgttttcaagttataacaaatcaaattaatcatgattatttatttcaatgacaccaacaatata 27360020  T

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Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 28146217 - 28146162
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  28146217 tttgttgctttcaaattataacaaatcaaattaatcatgattatttatttcaatga 28146162  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 3357267 - 3357345
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatc-tatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||||||||||||||  |||||||||||| ||||| ||||| ||||||||| | ||||||||    
T  3357267 ataaatgtttgtttctttcaaattataacaaacaaaattaatcatgattatcttattttaatgacatcaataatataac 3357345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 6063505 - 6063387
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| ||| ||  |||||||||||||||||| ||| |||||||| |||||||||| ||||| | | ||||||||||        |||    
T  6063505 aaagtaaaaaaataaatgttttttgttttcaaattataacaaataaaactaatcatgattatctatttcaatgaaaccaacaatataacaaaaaaaatat 6063406  T
Q  118 aatataaattcttattttt 136  Q
    ||| |||||||||||||||    
T  6063405 aatctaaattcttattttt 6063387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 16039488 - 16039426
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||| ||| | |||||||||    
T  16039488 ctttcaaattataacaaatcaaactaatcatgattatctatttcaatcacaccaacaatataa 16039426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 24791814 - 24791888
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatat 103  Q
    |||||| ||||||||||||||||||||||||| |||| ||| |||| ||||| |||| ||||||| | |||||||    
T  24791814 ataaatgtttgttactttcaaattataacaaaccaaactaaccatgattatcaatttcaatgacaccaacaatat 24791888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 37867739 - 37867665
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatat 103  Q
    |||||| |||||| ||||||| ||||||||||||||| |||  ||| |||||||||| ||||||||| |||||||    
T  37867739 ataaatgtttgttgctttcaagttataacaaatcaaactaactatgattatctatttcaatgacatcaacaatat 37867665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 37498462 - 37498519
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttat 79  Q
    |||||| |||||| |||||||||||||||||||||||||||||| |||  ||||||||    
T  37498462 tataaatataaatgtttgttactttcaaattataacaaatcaaactaaatatgtttat 37498519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 15265730 - 15265663
Alignment:
Q  25 aaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    ||||||||||||||||| ||||||| |||||||||| |||| | |||||| |||||||||| |||||||    
T  15265730 aaacataaatctttgttgctttcaagttataacaaaccaaact-atcatgattatctatttcaatgaca 15265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 24004494 - 24004552
Alignment:
Q  48 aaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||| |||| ||| |||||||||| ||||| ||| ||||||||||    
T  24004494 aaattataacaaatcaaactaattatgattatctatttcaatgaaatcaacaatataac 24004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 1111246 - 1111170
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| ||||  ||||||||| ||||||| | ||||||||||    
T  1111246 ataaatgtttgttgctttcaa-ttataacaaatcaaactaaccatgaatatctatttcaatgacaccaacaatataac 1111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 15508745 - 15508668
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||||||||| | ||||||||||| ||||||| |||| ||||||| || || |||| | ||||||||||    
T  15508745 ataaatgtttgttactttctagttataacaaattaaattaaccatgattatctacttcaacgacaccaacaatataac 15508668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 18072540 - 18072417
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntat 117  Q
    |||||| ||| |||||| ||| || |||||||||||||||| |||||||||| |||| |||| ||||| ||||| | | ||||||||||        |||    
T  18072540 aaagtaaaaatataaatgtttttt-ctttcaaattataacagatcaaattaaccatgattatatatttcaatgaaaccaacaatataac--gaaaaatat 18072444  T
Q  118 aatataaattcttatttttaatgacac 144  Q
    ||| ||||||||| |||||||||||||    
T  18072443 aatctaaattcttttttttaatgacac 18072417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 32114054 - 32114127
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    |||||| |||||| |||||||||||||| ||| |||| |||||||| |||||||||| || |||| | ||||||    
T  32114054 ataaatatttgttgctttcaaattataaaaaaacaaactaatcatgattatctatttcaacgacaccgacaata 32114127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 34753370 - 34753282
Alignment:
Q  18 aaagtataaacataaatctttgtta-ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||| |||||| ||| ||  |||| |||||||||||||||||| ||| |||| |||||||||| ||||| ||| ||||||||||    
T  34753370 aaagtataaatataaatgttttttggcttttaaattataacaaatcaaactaa-catgattatctatttcaatgaaatcaacaatataac 34753282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 37610153 - 37610076
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| ||||||||||||||| || ||||| |||| ||||| ||||||| |  |||||||||    
T  37610153 ataaatgtttgttgctttcaagttataacaaatcaaactagtcatgattatttatttcaatgacaccatcaatataac 37610076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 30874368 - 30874455
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| ||||||  |||||||||||||||||||| ||| |||| ||||| | ||| |||||||| |||||| | ||||||||||    
T  30874368 aaagtaaaaatataaatgcttgttactttcaaattataataaaccaaactaatcttatttgtctatttg-atgacaccgacaatataac 30874455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 36802545 - 36802457
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| |  ||||||||||||||||||||||| ||| |||  |||||||||| ||||| | | ||||||||||    
T  36802545 aaagtaaaaatataaatatttttctctttcaaattataacaaatcaaactaaccattattatctatttcaatgaaaccaacaatataac 36802457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 45407157 - 45407093
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| ||||||  |||||| ||||||||||||||| |||||||| |||| ||||| |||||||    
T  45407157 ataaatgtttgttgttttcaagttataacaaatcaaactaatcatgattatttatttcaatgaca 45407093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 22881487 - 22881577
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaa--ttaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| || |||||||||||||||||||||||   ||| |||| |||||||||| ||||| ||| ||||| ||||    
T  22881487 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactataaccatgattatctatttcaatgaaatcaacaatttaac 22881577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 33133910 - 33133977
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||| ||| |||| |||| |||||    
T  33133910 aaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccatgattatttattt 33133977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 27913202 - 27913144
Alignment:
Q  48 aaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||| ||| |||| |||||||||| | ||||| | ||||||||||    
T  27913202 aaattataacaaatcaaactaaccatgattatctatttcagtgacaccaacaatataac 27913144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 33025098 - 33025160
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||||||| |||| ||| | || |||||||||||||| ||||| ||||||||||    
T  33025098 tttcaagttataacaaaccaaactaaccgtgattatctatttgaataacatcaacaatataac 33025160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 35156435 - 35156377
Alignment:
Q  48 aaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||||||| |||||||| || ||||||| ||||| | | ||||||||||    
T  35156435 aaattataacaaatcaaactaatcatgattgtctatttcaatgaaaccaacaatataac 35156377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 41633801 - 41633739
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||| |||||| |||||||| |||||||||| ||| | | | ||||||||||    
T  41633801 tttcaaattataacatatcaaactaatcatgattatctattttaataaaaccaacaatataac 41633739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 360499 - 360415
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  ||||| ||||||||||||||||||  ||| ||||  ||||| ||||||| || |||| | ||||||||||    
T  360499 tataaatataaatgattgttgctttcaaattataacaaactaaactaattttgtttgtctatttcaaagacaccaacaatataac 360415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 9779621 - 9779685
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||| |||||| ||||||| |||||||||| ||||  ||  |||||||||||||| |||||||    
T  9779621 ataaatttttgttgctttcaagttataacaaaccaaaccaactatgtttatctatttcaatgaca 9779685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 10553308 - 10553256
Alignment:
Q  54 taacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||| ||| |||| |||||||||| ||||||| | ||||||||||    
T  10553308 taacaaatcaaactaaccatgattatctatttcaatgacaccaacaatataac 10553256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 25915123 - 25915195
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatg 90  Q
    |||||| ||| |||||| ||| ||  ||||||||||||| |||||||| ||| |||| |||||||||| ||||    
T  25915123 aaagtaaaaatataaatgttttttgttttcaaattataaaaaatcaaactaaccatgattatctatttcaatg 25915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 41633332 - 41633276
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| || ||||||||||||||||||||||| ||| |||  ||||||||||    
T  41633332 ataaattttttttgctttcaaattataacaaatcaaactaaccataattatctattt 41633276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 2513297 - 2513372
Alignment:
Q  30 taaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||| |||||| ||||||||||||||||||  ||||||| ||||||||||||||| ||||||| | |||||||||    
T  2513297 taaatgtttgttgctttcaaattataacaaactaaattaaccatgtttatctatttcaatgacaccaacaatataa 2513372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 18020579 - 18020504
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatata 104  Q
    |||||| |||||| ||||||||||||| ||||||||| |||||||| |||||||||| ||||||| | ||||||||    
T  18020579 ataaatgtttgttgctttcaaattatagcaaatcaaactaatcatgattatctatttcaatgacaccaacaatata 18020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 21495715 - 21495653
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| || |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21495715 ataaatgttttttgctttcaaattataacaaatcaaattaatcatgattatctatttcaatga 21495653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 47787177 - 47787258
Alignment:
Q  25 aaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||| ||  ||||| |||| ||||||| | ||||||||||    
T  47787177 aaacataaatgtttgttgctttcaaattataacaaatcaaataaattataattatccatttcaatgacaccaacaatataac 47787258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 22130599 - 22130687
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| |||||| ||| || | ||||||||||||||||  ||||||| ||||||||||| ||| ||||||||| ||||||||||    
T  22130599 aaagtaaaaagataaatatttattgcattcaaattataacaaactaaattaaccatgtttatctctttcaatgacatcaacaatataac 22130687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 14266516 - 14266453
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| ||||| ||| ||||||||||    
T  14266516 ctttcaaattataacaaatcaaactaattatgattatctatttcaatgaaatcaacaatataac 14266453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 17395729 - 17395652
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||| || |||| ||||||||||||||| || |||||||| |||||||||| ||||||| | ||||||||||    
T  17395729 ataaatgtttttttcttttaaattataacaaatccaactaatcatggttatctatttcaatgacaccaacaatataac 17395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 17476520 - 17476443
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||||||| |||| ||| ||||  ||||||||| ||||||| | ||||||||||    
T  17476520 ataaatgtttgttgctttcaaattataacaaaccaaactaaacatgaatatctatttcaatgacaccaacaatataac 17476443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 22152412 - 22152356
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||||||||||||||||||||||  ||||||| |||| ||||||||||    
T  22152412 ataaatgtttgttactttcaaattataacaaactaaattaaccatgattatctattt 22152356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 48795388 - 48795255
Alignment:
Q  31 aaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataatataaattctt 130  Q
    |||| ||||||||||| ||||||||||||| ||||||||  |||||||||||||| ||  |||||  ||||||||         ||||||||||||||||    
T  48795388 aaatgtttgttacttttaaattataacaaaccaaattaactatgtttatctatttcaaaaacatcaccaatataa--taaaaaatataatataaattctt 48795291  T
Q  131 a--tttttaatgaca-cgacaacaattattattata 163  Q
    |  |||||||||||| | |||||||| |||||||||    
T  48795290 atctttttaatgacatcaacaacaatcattattata 48795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 51006325 - 51006253
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaat 101  Q
    |||||| |||||| || |||| ||||||||||||||| |||||||| |||| ||||| ||||||||| |||||    
T  51006325 ataaatgtttgttgctctcaagttataacaaatcaaactaatcatgattatttatttcaatgacatcaacaat 51006253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 1451452 - 1451515
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||| |||||||||| |||||||| |||||||||| ||||||| | | ||||||||    
T  1451452 ctttcaaattatcacaaatcaaactaatcatgattatctatttcaatgacaccaataatataac 1451515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 21970203 - 21970140
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||| |||||| |||||||||||| |||||||| |||| ||||||||||    
T  21970203 tataaatataaatgtttgtgactttccaattataacaaaccaaattaaccatgattatctattt 21970140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 21992639 - 21992576
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| ||||| |||||| |||||||||||| |||||||| |||| ||||||||||    
T  21992639 tataaatataaatgtttgtgactttccaattataacaaaccaaattaaccatgattatctattt 21992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 34413433 - 34413370
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||| || ||||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  34413433 tataaatatagatgtttgtaactttcaaagtataacaaatcaaataaatcatgtttatttattt 34413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 54982774 - 54982689
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatca--tgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  ||||||||||||||||||||||||||||| ||| ||  | ||||||||||| ||||||| | ||||||||||    
T  54982774 tataaatataaatgattgttactttcaaattataacaaatcaaactaa-catttttttatctatttcaatgacaccaacaatataac 54982689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 13875650 - 13875600
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttat 79  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||| ||||    
T  13875650 ataaatgtttgttgctttcaaattataacaaaccaaattaatcatgattat 13875600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 22258272 - 22258202
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||||||||| |||||||||| |||| |||  ||| |||||||||| ||||||| | ||||||||||    
T  22258272 tttgttactttcaagttataacaaaccaaactaactatgattatctatttcaatgacaccaacaatataac 22258202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 23268201 - 23268087
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataacnnnnnnnntataata 121  Q
    |||||| |||||| | |||  ||||||||||||||||||||||| ||||||||  ||| ||||| ||||||| | ||| ||||||        ||||||     
T  23268201 tataaatataaatgtctgtagctttcaaattataacaaatcaaactaatcatgaatatttatttcaatgacaccaacagtataacaaaaaaaatataatt 23268102  T
Q  122 taaattcttattttt 136  Q
    |||||||||||||||    
T  23268101 taaattcttattttt 23268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 41923475 - 41923354
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatcc-acaatataacnnnnnnnntataatataaattc-ttatttttaatga 141  Q
    |||||||||||||||||||||| ||| |||| |||||||||| ||||| |||| ||||||||||        |||||| ||||||| || ||||||||||    
T  41923475 tttcaaattataacaaatcaaactaaccatgattatctatttcaatga-atccaacaatataacaaaaaaaatataatctaaattctttttttttaatga 41923377  T
Q  142 ca-cgacaacaattattattata 163  Q
    || | ||||||||| ||||||||    
T  41923376 caccaacaacaatttttattata 41923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 9859810 - 9859887
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||  |||||| | ||||||||||||| ||| |||| |||||||||||| ||||| | ||||||||||    
T  9859810 ataaatgtttgttgttttcaagtcataacaaatcaaactaaccatgattatctatttgattgacaccaacaatataac 9859887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 12565415 - 12565492
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| |||||| ||||||||||||  ||| ||||||||||  |||||||  ||||||||||    
T  12565415 ataaatgtttgttgctttcaagttataagaaatcaaattaactatgattatctatttcgatgacattaacaatataac 12565492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 13259814 - 13259891
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| ||||||| |||||| ||||||||||||  ||| ||||||||||  |||||||  ||||||||||    
T  13259814 ataaatgtttgttgctttcaagttataagaaatcaaattaactatgattatctatttcgatgacattaacaatataac 13259891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 27398335 - 27398258
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||||||| |||| |||  ||  |||||||||| ||||||| | ||||||||||    
T  27398335 ataaatttttgttgctttcaaattataacaaaccaaactaactattattatctatttcaatgacaccaacaatataac 27398258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 27399975 - 27400052
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||||||||||||||| |||||| ||| |||| |||| |||||  |||| ||| ||||||||||    
T  27399975 ataaatgtttgttgctttcaaattataacatatcaaactaaccatgattatatattttgatgaaatcaacaatataac 27400052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 25995188 - 25995232
Alignment:
Q  22 tataaacataaatctttgttactttcaaattataacaaatcaaat 66  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||    
T  25995188 tataaatataaatattttttactttcaaattataacaaatcaaat 25995232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 26130930 - 26130874
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| ||||| |||||||| ||||||||||||||| ||| |||| ||||||||||    
T  26130930 ataaatgtttgtcactttcaagttataacaaatcaaactaaccatgattatctattt 26130874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 1149289 - 1149352
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||||| |||||||||||||| ||| |||| |||||||||| ||||| | | ||||||||||    
T  1149289 ctttcaaagtataacaaatcaaactaaccatgattatctattttaatgaaaccaacaatataac 1149352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 5492903 - 5492990
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||| ||| |||||| ||| || |||| |||||||||||||||||| ||| |||| || | ||||||||||| | | |||||||||    
T  5492903 aaagtaaaaatataaatgttttttgcttttaaattataacaaatcaaactaaccatgattgtttatttgaatgaaaccaacaatataa 5492990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 7791196 - 7791255
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    ||||||||||||||||||||||  ||| |||| |||||||||| ||||||| | ||||||    
T  7791196 ctttcaaattataacaaatcaagctaaccatgattatctatttcaatgacaccgacaata 7791255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 29541489 - 29541430
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaata 102  Q
    ||||||||||||||||||||||| ||| |||| |||| ||||| ||||||| | ||||||    
T  29541489 ctttcaaattataacaaatcaaactaaccatgattatatatttcaatgacaccaacaata 29541430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 50098491 - 50098566
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgaca 93  Q
    |||||||||  ||||||  ||||||||||||||||||| |||| |||| |||   ||||||||||||| |||||||    
T  50098491 aaagtataattataaatgattgttactttcaaattataccaaaccaaactaactttgtttatctatttcaatgaca 50098566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 20838489 - 20838407
Alignment:
Q  23 ataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||| ||||||  ||||| |||||||||||||||||| |||| |||   ||||||||||||| || |||| | |||||||||    
T  20838489 ataaatataaatgattgttgctttcaaattataacaaaccaaactaacattgtttatctatttcaacgacaccaacaatataa 20838407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 50099150 - 50099088
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||||||||||| |||  |||  ||||||||| ||||||| ||||||||||||    
T  50099150 tttcaagttataacaaatcaaactaacaatgactatctatttcaatgacacccacaatataac 50099088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 38809256 - 38809312
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    |||||| |||||| |||||||||||||| ||| |||| ||| |||| ||||||||||    
T  38809256 ataaatgtttgttgctttcaaattataagaaaccaaactaaccatgattatctattt 38809312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 44408 - 44331
Alignment:
Q  29 ataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||| |||||||||| ||||||| | | ||||||||    
T  44408 ataaatgtttgttgctttaaaattataacaaatcaaactaatcatgattatctatttcaatgacaccaataatataac 44331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 831 - 784
Alignment:
Q  59 aatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  831 aatcaaactaatcatgtttatctatttgaatgacatcaacaatataac 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 43036 - 43121
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatat 103  Q
    |||||| ||| ||||||  ||||| |||||||||||||||||| |||| |||||||| |||||||||| | ||||| | |||||||    
T  43036 aaagtaaaaatataaatgattgtttctttcaaattataacaaagcaaactaatcatgattatctatttcattgacaccaacaatat 43121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8337 - 8410
Alignment:
Q  18 aaagtataaacataaatctttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatga 91  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||||  ||| |||| |||||||||| |||||    
T  8337 aaagtaaaaatataaatattttttgctttcaaattataacaaatcaagctaaccatgattatctattttaatga 8410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 41485 - 41540
Alignment:
Q  51 ttataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    ||||||||||||||||||| |||| |||| ||||| ||||||| | ||||||||||    
T  41485 ttataacaaatcaaattaaccatgattatttattttaatgacaccaacaatataac 41540  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 3824 - 3762
Alignment:
Q  43 ctttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    |||||||||||||| ||||||||||||  ||| |||||||||| ||| | ||| |||||||||    
T  3824 ctttcaaattataaaaaatcaaattaactatgattatctatttcaattaaatcaacaatataa 3762  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 22179 - 22233
Alignment:
Q  51 ttataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataa 105  Q
    ||||||||||||||| ||| |||| |||||||||| ||||||| | |||||||||    
T  22179 ttataacaaatcaaactaaccatgattatctatttcaatgacaccaacaatataa 22233  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 21436 - 21506
Alignment:
Q  36 tttgttactttcaaattataacaaatcaaattaatcatgtttatctatttgaatgacatccacaatataac 106  Q
    |||||| ||||||| ||||||||||||||| ||| |||| |||| ||||| |||| || | ||||||||||    
T  21436 tttgttgctttcaagttataacaaatcaaactaaccatgattatttatttcaatggcaccaacaatataac 21506  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 21733 - 21692
Alignment:
Q  44 tttcaaattataacaaatcaaattaatcatgtttatctattt 85  Q
    ||||||||||||| |||||||||||| || ||||||||||||    
T  21733 tttcaaattataataaatcaaattaaccacgtttatctattt 21692  T

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