View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3734_high_5 (Length: 424)
Name: NF3734_high_5
Description: NF3734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3734_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Complemental strand, 16772672 - 16772252
Alignment:
| Q |
1 |
tcttcaagctgatttaatgccaataattggtaataatgaggccaataatgagcttcatggtgattggcttttagttactagaaagaaaaaacctgtgaac |
100 |
Q |
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| T |
16772672 |
tcttcaagctgatttaatgccaataattggtaataatgacgccaataatgagcttcttggtgattggcttttagttactagaaagaaaaaacctgtgaac |
16772573 |
T |
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| Q |
101 |
aaccctaccccaccaacatcaaaaaccaccactaataaaaataggtttaatatcttgtctagcatggcccaaaaatccaaaaccgatccatcacatagtg |
200 |
Q |
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| T |
16772572 |
aaccctaccccaccaacatcaaaaaccaccactaataaaaataggtttaatatcttgtctagcatggcccaaaaatccaaaaccgatccaccacatagtg |
16772473 |
T |
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| Q |
201 |
acatgccacctaggccaaaagctgaccaaataaagaaaacaaacaaaaatacctatgacctaaagcgccgacgtcatgatgatgctggtgatgagaaaat |
300 |
Q |
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| T |
16772472 |
acatgccacctaggccaaaaggtgaccaaataaagaaaacaaacaaaaatacctatgacctaaagcgccgacgtcatgatgatgctggtgatgagaaaat |
16772373 |
T |
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| Q |
301 |
cattatgccacctactaaaagtatattgtccccaccaaagaatgtgaaccaagttttcaattacgtgccaattgataaggtcacatacaacaacgtaaca |
400 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | |
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| T |
16772372 |
cattatgtcacctactaaaagtatattgtccccaccaaagaatgtgaaccaagttttcaat---atgccaattgataaggtcacatacaacaacgtgata |
16772276 |
T |
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| Q |
401 |
gaaaccgaccccaccaatataaac |
424 |
Q |
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| T |
16772275 |
gaaaccgaccccaccaatataaac |
16772252 |
T |
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