View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3734_high_9 (Length: 330)
Name: NF3734_high_9
Description: NF3734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3734_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 43717916 - 43717597
Alignment:
| Q |
1 |
tatggtgaaagtatacgtgagagtgcgtgaccataagtgttctggacttaatgctgaatgatcctgcatcacatggtgagggcctagctaaagagttagt |
100 |
Q |
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|||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
43717916 |
tatggtgaaagtatacttgagattgcttgaccataagtgttctggacttaatgctgaatgatcctacatcacatggtgagggcctagctaaagagttagt |
43717817 |
T |
|
| Q |
101 |
agttgaatgaagacatgccaacccatttcttttcctgtattcaccaacaatcataaaggaacctaaagagggatccaaaaggtacctattgatagtttac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43717816 |
agttgaatgaagacatgccaacccatttcttttcctgtattcaccaacaatcataaaggaacctaaagagggatccaaaaggtacctattgatagtttac |
43717717 |
T |
|
| Q |
201 |
cttccagctcaacctgacatctccaaattttacttttgacatattgagaaacaccattcacttattgccctctttttaagaattgattgaagcaacttct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43717716 |
cttccagctcaacctgacatctccaaattttacttttgacatattgagaaacaccattcacttattgccctctttttaagaattgattgaagcaacttct |
43717617 |
T |
|
| Q |
301 |
tatagaaagctttccctttg |
320 |
Q |
| |
|
||||||||||| |||||||| |
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| T |
43717616 |
tatagaaagctctccctttg |
43717597 |
T |
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