View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3737_high_3 (Length: 406)

Name: NF3737_high_3
Description: NF3737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3737_high_3
NF3737_high_3
[»] chr3 (84 HSPs)
chr3 (115-225)||(4046585-4046695)
chr3 (272-392)||(4046417-4046542)
chr3 (269-392)||(51998886-51999013)
chr3 (272-392)||(37182717-37182842)
chr3 (272-392)||(6044981-6045105)
chr3 (272-392)||(42564243-42564367)
chr3 (272-392)||(50734313-50734437)
chr3 (272-392)||(50778418-50778542)
chr3 (272-392)||(32120087-32120212)
chr3 (115-224)||(37182571-37182680)
chr3 (272-392)||(44084605-44084730)
chr3 (317-392)||(10424354-10424429)
chr3 (115-225)||(51998737-51998847)
chr3 (116-225)||(29702122-29702231)
chr3 (147-225)||(42564411-42564489)
chr3 (147-224)||(33187638-33187715)
chr3 (272-392)||(20139854-20139978)
chr3 (147-225)||(4873696-4873774)
chr3 (318-392)||(38571850-38571924)
chr3 (272-389)||(41183570-41183692)
chr3 (115-225)||(50734483-50734593)
chr3 (115-225)||(50778262-50778372)
chr3 (318-377)||(7008422-7008481)
chr3 (163-225)||(32119979-32120041)
chr3 (116-222)||(41183730-41183836)
chr3 (163-225)||(44084774-44084836)
chr3 (272-392)||(55027060-55027184)
chr3 (163-225)||(6044874-6044936)
chr3 (318-392)||(15007492-15007566)
chr3 (164-225)||(12975290-12975351)
chr3 (147-223)||(6833081-6833157)
chr3 (163-225)||(10424204-10424266)
chr3 (164-225)||(48886378-48886439)
chr3 (166-223)||(11908499-11908556)
chr3 (164-225)||(51999618-51999679)
chr3 (177-225)||(49026982-49027030)
chr3 (177-224)||(50415363-50415410)
chr3 (177-223)||(26162103-26162149)
chr3 (270-308)||(26162186-26162224)
chr3 (177-223)||(35471882-35471928)
chr3 (318-392)||(46572659-46572733)
chr3 (270-307)||(29702041-29702078)
chr3 (164-225)||(36178028-36178089)
chr3 (164-225)||(51305024-51305085)
chr3 (48-114)||(51998624-51998682)
chr3 (82-114)||(4046751-4046783)
chr3 (272-308)||(4873806-4873842)
chr3 (161-225)||(7008576-7008640)
chr3 (164-224)||(20140024-20140084)
chr3 (177-225)||(30415016-30415064)
chr3 (272-308)||(30415110-30415146)
chr3 (165-225)||(31169823-31169883)
chr3 (272-308)||(38571796-38571832)
chr3 (318-353)||(6832948-6832983)
chr3 (272-307)||(7008504-7008539)
chr3 (273-308)||(25787409-25787444)
chr3 (273-308)||(25829366-25829401)
chr3 (273-308)||(33934896-33934931)
chr3 (318-353)||(35540268-35540303)
chr3 (273-308)||(42598064-42598099)
chr3 (318-353)||(43475751-43475786)
chr3 (269-308)||(43475803-43475842)
chr3 (147-225)||(35540099-35540177)
chr3 (350-392)||(46136992-46137034)
chr3 (159-225)||(49406876-49406942)
chr3 (317-350)||(31169964-31169997)
chr3 (164-225)||(55027223-55027284)
chr3 (272-308)||(5844671-5844707)
chr3 (272-308)||(10424303-10424339)
chr3 (272-308)||(12975214-12975250)
chr3 (272-308)||(17469801-17469837)
chr3 (177-225)||(27848050-27848098)
chr3 (317-353)||(29701991-29702027)
chr3 (272-308)||(30688554-30688590)
chr3 (272-308)||(31169914-31169950)
chr3 (272-308)||(35471966-35472002)
chr3 (272-308)||(42602255-42602291)
chr3 (177-225)||(46136837-46136885)
chr3 (272-308)||(46136921-46136957)
chr3 (272-308)||(47147658-47147694)
chr3 (317-353)||(49407022-49407058)
chr3 (272-308)||(50034677-50034713)
chr3 (82-114)||(50734652-50734684)
chr3 (82-114)||(50778171-50778203)
[»] chr5 (64 HSPs)
chr5 (115-225)||(23648562-23648672)
chr5 (115-225)||(23809900-23810010)
chr5 (115-225)||(13592416-13592526)
chr5 (272-392)||(13592564-13592689)
chr5 (272-392)||(19241606-19241729)
chr5 (272-392)||(42318182-42318306)
chr5 (317-392)||(29616190-29616265)
chr5 (317-392)||(23648761-23648836)
chr5 (272-392)||(23809736-23809860)
chr5 (116-225)||(7651441-7651550)
chr5 (116-225)||(31007897-31008006)
chr5 (272-389)||(31008052-31008173)
chr5 (157-224)||(29616024-29616091)
chr5 (318-392)||(36572102-36572175)
chr5 (147-225)||(42804323-42804401)
chr5 (318-391)||(30644739-30644812)
chr5 (163-225)||(19241775-19241837)
chr5 (164-223)||(3455287-3455346)
chr5 (318-379)||(8681015-8681076)
chr5 (164-225)||(25670361-25670422)
chr5 (164-225)||(32363006-32363067)
chr5 (163-223)||(39008972-39009032)
chr5 (317-392)||(27407473-27407548)
chr5 (317-392)||(34529113-34529188)
chr5 (159-222)||(36571941-36572004)
chr5 (158-225)||(39239009-39239076)
chr5 (275-353)||(42804440-42804521)
chr5 (178-223)||(4218985-4219030)
chr5 (166-223)||(23090000-23090057)
chr5 (82-114)||(23648473-23648505)
chr5 (82-114)||(23810067-23810099)
chr5 (177-225)||(27946080-27946128)
chr5 (177-225)||(32972943-32972991)
chr5 (272-308)||(32973037-32973073)
chr5 (272-308)||(36572051-36572087)
chr5 (272-308)||(40892177-40892213)
chr5 (177-225)||(40892251-40892299)
chr5 (177-225)||(42318351-42318399)
chr5 (273-308)||(3455213-3455248)
chr5 (273-308)||(4580394-4580429)
chr5 (318-353)||(4938427-4938462)
chr5 (272-307)||(7651359-7651394)
chr5 (178-225)||(9958147-9958194)
chr5 (118-225)||(13479091-13479198)
chr5 (166-225)||(27405739-27405798)
chr5 (273-308)||(27405837-27405872)
chr5 (273-308)||(27946006-27946041)
chr5 (273-308)||(31011730-31011765)
chr5 (274-308)||(15972971-15973005)
chr5 (48-81)||(13592311-13592344)
chr5 (317-354)||(13592710-13592747)
chr5 (355-392)||(39008815-39008852)
chr5 (272-308)||(4219067-4219103)
chr5 (272-308)||(4938476-4938512)
chr5 (272-308)||(7827498-7827534)
chr5 (273-305)||(9958072-9958104)
chr5 (272-308)||(23648712-23648748)
chr5 (272-308)||(25033573-25033609)
chr5 (272-308)||(25653209-25653245)
chr5 (272-308)||(25670459-25670495)
chr5 (272-308)||(29616134-29616170)
chr5 (272-308)||(30644687-30644723)
chr5 (272-308)||(32363107-32363143)
chr5 (272-308)||(41152526-41152562)
[»] chr2 (47 HSPs)
chr2 (115-225)||(44280573-44280683)
chr2 (273-392)||(14383268-14383391)
chr2 (272-392)||(22349551-22349675)
chr2 (272-392)||(36527117-36527243)
chr2 (272-392)||(44280415-44280539)
chr2 (115-225)||(36527280-36527390)
chr2 (115-225)||(14383439-14383549)
chr2 (317-392)||(43021988-43022063)
chr2 (272-392)||(1072711-1072836)
chr2 (163-225)||(22349444-22349506)
chr2 (163-225)||(43022149-43022211)
chr2 (163-223)||(17928747-17928807)
chr2 (159-225)||(13151156-13151222)
chr2 (164-223)||(5144920-5144979)
chr2 (163-223)||(39490592-39490652)
chr2 (147-225)||(6363841-6363919)
chr2 (177-223)||(36209036-36209082)
chr2 (178-223)||(1308244-1308289)
chr2 (48-114)||(14383607-14383665)
chr2 (48-114)||(36527449-36527507)
chr2 (48-114)||(44280741-44280799)
chr2 (317-353)||(4279428-4279464)
chr2 (177-225)||(7585089-7585137)
chr2 (272-308)||(7585183-7585219)
chr2 (318-382)||(9118132-9118196)
chr2 (272-308)||(9118211-9118247)
chr2 (317-353)||(14151938-14151974)
chr2 (272-308)||(39432411-39432447)
chr2 (272-308)||(43022079-43022115)
chr2 (273-308)||(9072621-9072656)
chr2 (273-308)||(12858276-12858311)
chr2 (273-308)||(30819318-30819353)
chr2 (270-308)||(926499-926537)
chr2 (178-224)||(7762753-7762799)
chr2 (165-223)||(17486261-17486319)
chr2 (270-308)||(31184935-31184973)
chr2 (164-225)||(9118286-9118347)
chr2 (171-224)||(14151816-14151869)
chr2 (317-354)||(44280357-44280394)
chr2 (272-308)||(1308330-1308366)
chr2 (272-308)||(4296302-4296338)
chr2 (318-350)||(5145077-5145109)
chr2 (272-308)||(7762832-7762868)
chr2 (272-308)||(8855384-8855420)
chr2 (272-304)||(13151231-13151263)
chr2 (272-308)||(17928854-17928890)
chr2 (272-308)||(36855055-36855091)
[»] chr4 (73 HSPs)
chr4 (115-225)||(52773353-52773463)
chr4 (276-392)||(52773188-52773309)
chr4 (115-225)||(55549553-55549663)
chr4 (317-390)||(55549751-55549824)
chr4 (272-392)||(8995052-8995176)
chr4 (272-392)||(16021138-16021262)
chr4 (317-392)||(34463237-34463312)
chr4 (272-392)||(3529907-3530032)
chr4 (270-392)||(13113830-13113955)
chr4 (317-390)||(40721311-40721384)
chr4 (317-392)||(34198957-34199032)
chr4 (318-392)||(23539371-23539445)
chr4 (147-225)||(33077397-33077475)
chr4 (116-225)||(38174003-38174112)
chr4 (318-392)||(28901413-28901487)
chr4 (116-225)||(52018110-52018217)
chr4 (272-392)||(56054551-56054670)
chr4 (318-392)||(31336234-31336308)
chr4 (163-225)||(3529802-3529864)
chr4 (163-225)||(8995221-8995283)
chr4 (163-225)||(34198800-34198862)
chr4 (163-225)||(34463085-34463147)
chr4 (163-225)||(40721472-40721534)
chr4 (146-225)||(13113989-13114065)
chr4 (164-224)||(33609420-33609480)
chr4 (118-225)||(13093671-13093778)
chr4 (177-223)||(4982121-4982167)
chr4 (115-225)||(16021308-16021418)
chr4 (270-308)||(28447611-28447649)
chr4 (164-225)||(33523841-33523902)
chr4 (164-225)||(48403456-48403517)
chr4 (164-225)||(53347244-53347305)
chr4 (177-225)||(16171459-16171507)
chr4 (163-223)||(18468907-18468967)
chr4 (165-225)||(23539222-23539282)
chr4 (118-225)||(19273377-19273484)
chr4 (46-114)||(55549434-55549494)
chr4 (163-225)||(23389514-23389576)
chr4 (270-308)||(28901503-28901541)
chr4 (317-359)||(33077556-33077598)
chr4 (147-225)||(34434082-34434160)
chr4 (274-353)||(38173877-38173960)
chr4 (270-308)||(48403553-48403591)
chr4 (164-225)||(35809855-35809916)
chr4 (164-225)||(56054708-56054769)
chr4 (177-225)||(3614805-3614853)
chr4 (272-308)||(3614898-3614934)
chr4 (272-308)||(16171541-16171577)
chr4 (272-308)||(21654501-21654537)
chr4 (272-308)||(31336181-31336217)
chr4 (272-308)||(31848452-31848488)
chr4 (272-308)||(48506244-48506280)
chr4 (318-382)||(48506295-48506359)
chr4 (341-392)||(28901253-28901303)
chr4 (270-308)||(17329551-17329589)
chr4 (147-225)||(28447683-28447761)
chr4 (159-225)||(28901575-28901641)
chr4 (270-308)||(33607392-33607430)
chr4 (270-307)||(12159129-12159166)
chr4 (164-225)||(27864372-27864433)
chr4 (164-225)||(48506144-48506205)
chr4 (317-354)||(52773130-52773167)
chr4 (355-392)||(53347415-53347452)
chr4 (272-308)||(2211995-2212031)
chr4 (177-217)||(17329469-17329509)
chr4 (272-308)||(23389621-23389657)
chr4 (272-308)||(33077507-33077543)
chr4 (272-308)||(34463188-34463224)
chr4 (272-308)||(40596413-40596449)
chr4 (272-308)||(45081127-45081163)
chr4 (272-308)||(46914189-46914225)
chr4 (318-350)||(53347389-53347421)
chr4 (272-308)||(55549702-55549738)
[»] chr1 (63 HSPs)
chr1 (272-392)||(37690945-37691068)
chr1 (317-392)||(31159730-31159805)
chr1 (272-392)||(45623180-45623304)
chr1 (272-392)||(48384828-48384952)
chr1 (272-392)||(51494123-51494247)
chr1 (115-225)||(45623025-45623135)
chr1 (115-225)||(51493967-51494077)
chr1 (270-392)||(29919666-29919792)
chr1 (317-392)||(14096984-14097059)
chr1 (318-392)||(19578613-19578687)
chr1 (115-225)||(29919828-29919938)
chr1 (115-224)||(37690792-37690901)
chr1 (272-392)||(48407667-48407793)
chr1 (115-225)||(14097155-14097265)
chr1 (147-225)||(47297125-47297203)
chr1 (272-390)||(10265683-10265805)
chr1 (272-392)||(17675994-17676117)
chr1 (171-225)||(19578471-19578525)
chr1 (163-223)||(31159891-31159951)
chr1 (163-225)||(48384720-48384782)
chr1 (164-225)||(37823066-37823127)
chr1 (272-353)||(43739367-43739452)
chr1 (147-202)||(17675848-17675903)
chr1 (164-225)||(29524362-29524423)
chr1 (164-225)||(45455453-45455514)
chr1 (269-308)||(8471598-8471637)
chr1 (273-308)||(33167600-33167635)
chr1 (317-392)||(41542605-41542680)
chr1 (159-225)||(10265515-10265581)
chr1 (164-225)||(33167676-33167737)
chr1 (48-114)||(51493850-51493908)
chr1 (272-308)||(643501-643537)
chr1 (177-225)||(2474680-2474728)
chr1 (272-308)||(2474773-2474809)
chr1 (82-114)||(14097322-14097354)
chr1 (272-308)||(19578561-19578597)
chr1 (272-308)||(51156334-51156370)
chr1 (273-308)||(45242437-45242472)
chr1 (159-225)||(36231382-36231448)
chr1 (317-379)||(36303405-36303467)
chr1 (274-308)||(47297242-47297276)
chr1 (181-223)||(51156258-51156300)
chr1 (355-392)||(8471520-8471557)
chr1 (48-81)||(29920022-29920055)
chr1 (147-220)||(30878163-30878236)
chr1 (355-392)||(33167523-33167560)
chr1 (48-110)||(37690675-37690729)
chr1 (159-224)||(43739490-43739555)
chr1 (272-308)||(8464952-8464988)
chr1 (185-225)||(17675913-17675953)
chr1 (272-308)||(27629991-27630027)
chr1 (272-308)||(29524289-29524325)
chr1 (82-114)||(29919997-29920029)
chr1 (272-308)||(31471573-31471609)
chr1 (276-308)||(36231309-36231341)
chr1 (272-308)||(37419875-37419911)
chr1 (272-308)||(37646088-37646124)
chr1 (272-308)||(37822987-37823023)
chr1 (272-308)||(44450916-44450952)
chr1 (272-308)||(44651460-44651496)
chr1 (272-308)||(45363866-45363902)
chr1 (147-223)||(45363941-45364017)
chr1 (82-114)||(45622934-45622966)
[»] scaffold1905 (4 HSPs)
scaffold1905 (272-392)||(226-350)
scaffold1905 (147-225)||(385-463)
scaffold1905 (164-223)||(982-1041)
scaffold1905 (272-308)||(1084-1120)
[»] chr8 (45 HSPs)
chr8 (270-392)||(42860220-42860347)
chr8 (269-392)||(15056880-15057007)
chr8 (272-392)||(35932154-35932278)
chr8 (115-225)||(45100519-45100629)
chr8 (272-392)||(45100673-45100798)
chr8 (147-225)||(15057048-15057126)
chr8 (115-225)||(42860384-42860496)
chr8 (272-392)||(12272110-12272234)
chr8 (163-225)||(13783737-13783799)
chr8 (164-225)||(44503730-44503791)
chr8 (163-223)||(44150349-44150409)
chr8 (318-379)||(41477507-41477568)
chr8 (163-223)||(29732149-29732209)
chr8 (177-225)||(38204832-38204880)
chr8 (269-308)||(35101781-35101820)
chr8 (118-225)||(40284069-40284176)
chr8 (177-223)||(1632978-1633024)
chr8 (48-115)||(45100402-45100461)
chr8 (164-225)||(26245092-26245153)
chr8 (164-221)||(31129003-31129060)
chr8 (177-225)||(1954811-1954859)
chr8 (276-308)||(7511416-7511448)
chr8 (272-308)||(13817436-13817472)
chr8 (272-308)||(31129101-31129137)
chr8 (82-114)||(42860546-42860578)
chr8 (273-308)||(23550127-23550162)
chr8 (164-223)||(23550210-23550269)
chr8 (178-225)||(35932322-35932369)
chr8 (273-308)||(42861082-42861117)
chr8 (159-225)||(13497730-13497796)
chr8 (178-224)||(30529216-30529262)
chr8 (177-223)||(43523828-43523874)
chr8 (159-224)||(7511302-7511367)
chr8 (164-225)||(13947898-13947959)
chr8 (318-379)||(17494306-17494366)
chr8 (272-308)||(1633068-1633104)
chr8 (276-308)||(5214182-5214214)
chr8 (272-308)||(5736407-5736443)
chr8 (272-308)||(8449685-8449721)
chr8 (272-308)||(13783837-13783873)
chr8 (272-308)||(18028995-18029031)
chr8 (272-308)||(26631804-26631840)
chr8 (272-308)||(26748610-26748646)
chr8 (272-308)||(30470470-30470506)
chr8 (272-308)||(34954984-34955020)
[»] chr7 (48 HSPs)
chr7 (272-392)||(28317732-28317856)
chr7 (272-392)||(30720417-30720540)
chr7 (270-392)||(40300582-40300708)
chr7 (317-392)||(22660180-22660255)
chr7 (317-392)||(42881901-42881976)
chr7 (272-388)||(47159060-47159181)
chr7 (318-390)||(30566921-30566993)
chr7 (115-225)||(30720582-30720694)
chr7 (318-392)||(33078506-33078580)
chr7 (147-225)||(33508139-33508217)
chr7 (272-392)||(33508253-33508375)
chr7 (147-225)||(22660328-22660405)
chr7 (163-225)||(42882056-42882118)
chr7 (163-225)||(47158957-47159019)
chr7 (163-225)||(28317626-28317688)
chr7 (318-379)||(35192805-35192866)
chr7 (164-225)||(39770185-39770246)
chr7 (272-308)||(37952161-37952197)
chr7 (147-199)||(40300168-40300220)
chr7 (177-224)||(37952242-37952289)
chr7 (164-223)||(38352076-38352135)
chr7 (147-225)||(115142-115220)
chr7 (177-223)||(26815590-26815636)
chr7 (177-223)||(32749409-32749455)
chr7 (177-223)||(40690795-40690841)
chr7 (178-223)||(20354719-20354764)
chr7 (160-225)||(43201480-43201545)
chr7 (164-225)||(45548938-45548999)
chr7 (317-353)||(115010-115046)
chr7 (272-308)||(26815509-26815545)
chr7 (272-308)||(30630286-30630322)
chr7 (177-225)||(36521965-36522013)
chr7 (272-308)||(38970435-38970471)
chr7 (272-308)||(48985268-48985304)
chr7 (318-353)||(38970384-38970419)
chr7 (159-225)||(38970506-38970572)
chr7 (270-308)||(39770114-39770152)
chr7 (355-392)||(37952084-37952121)
chr7 (272-308)||(5813663-5813699)
chr7 (272-308)||(32126902-32126938)
chr7 (272-308)||(32749337-32749373)
chr7 (272-308)||(33078455-33078491)
chr7 (272-308)||(33379670-33379706)
chr7 (272-308)||(35028471-35028507)
chr7 (276-308)||(36521882-36521914)
chr7 (272-308)||(37888765-37888801)
chr7 (272-304)||(38352003-38352035)
chr7 (356-392)||(40690631-40690667)
[»] chr6 (31 HSPs)
chr6 (272-392)||(10886537-10886661)
chr6 (317-390)||(30446563-30446636)
chr6 (146-225)||(10886697-10886776)
chr6 (272-392)||(12502207-12502332)
chr6 (164-224)||(24348944-24349004)
chr6 (318-380)||(8222422-8222484)
chr6 (318-392)||(12513324-12513398)
chr6 (147-224)||(34242864-34242940)
chr6 (163-224)||(8675163-8675224)
chr6 (164-225)||(26653702-26653763)
chr6 (164-225)||(26759670-26759731)
chr6 (272-308)||(8668821-8668857)
chr6 (177-225)||(8668901-8668949)
chr6 (272-308)||(34841862-34841898)
chr6 (177-225)||(34841944-34841992)
chr6 (273-308)||(635067-635102)
chr6 (273-308)||(6377131-6377166)
chr6 (273-308)||(17957999-17958034)
chr6 (270-308)||(32360133-32360171)
chr6 (164-225)||(12502372-12502433)
chr6 (332-381)||(24115358-24115407)
chr6 (159-224)||(30446724-30446789)
chr6 (272-308)||(198212-198248)
chr6 (272-308)||(2503730-2503766)
chr6 (272-308)||(8222500-8222536)
chr6 (272-308)||(12513412-12513448)
chr6 (165-225)||(12513482-12513542)
chr6 (272-308)||(24348863-24348899)
chr6 (272-308)||(29951724-29951760)
chr6 (272-308)||(30446652-30446688)
chr6 (272-308)||(34328785-34328821)
[»] scaffold0021 (2 HSPs)
scaffold0021 (164-223)||(109773-109832)
scaffold0021 (270-308)||(109865-109903)
[»] scaffold0012 (1 HSPs)
scaffold0012 (318-379)||(124349-124410)
[»] scaffold0004 (2 HSPs)
scaffold0004 (160-223)||(106298-106361)
scaffold0004 (269-305)||(106222-106258)
[»] scaffold0015 (1 HSPs)
scaffold0015 (177-223)||(83476-83522)
[»] scaffold1183 (1 HSPs)
scaffold1183 (164-225)||(111-172)
[»] scaffold0758 (1 HSPs)
scaffold0758 (272-308)||(6369-6405)


Alignment Details
Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 4046695 - 4046585
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4046695 caattcaacatgttgaatgcatggtccacggagacacttggcatgttttgattggctgctcggatttttatcttcttaataatttggatcgaattatttc 4046596  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  4046595 attgcaaataa 4046585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 4046542 - 4046417
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4046542 tctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcatttc 4046443  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  4046442 ttttgaagttttagtgtttatttagt 4046417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 392
Target Start/End: Original strand, 51998886 - 51999013
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatt 364  Q
    ||||||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  51998886 ctctctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctt 51998985  T
Q  365 tcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||||    
T  51998986 tcttttgaagttttagtgtttatttagt 51999013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 37182717 - 37182842
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  37182717 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttc 37182816  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  37182817 ttttgaagttttagtgtttatttagt 37182842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 6044981 - 6045105
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||| ||||||||||||||| | |||||    
T  6044981 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 6045080  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  6045081 tttgaagttttagtgtttatttagt 6045105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 42564367 - 42564243
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac----nnnnnnnntcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||  ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  42564367 tctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttct 42564268  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  42564267 tttgaagttttagtgtttatttagt 42564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 50734437 - 50734313
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            |||| |||||||||||||||||| ||||||||||||||||||| | |||||    
T  50734437 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttct 50734338  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  50734337 tttgaagttttagtgtttatttagt 50734313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 50778418 - 50778542
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            |||| |||||||||||||||||| ||||||||||||||||||| | |||||    
T  50778418 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttct 50778517  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  50778518 tttgaagttttagtgtttatttagt 50778542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 32120087 - 32120212
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||| ||||||||||||||| ||||||||||||||||||| | ||||    
T  32120087 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagcctttc 32120186  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  32120187 ttttgaagttttagtgtttatttagt 32120212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 37182571 - 37182680
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  37182571 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttc 37182670  T
Q  215 attgcaaata 224  Q
    ||||||||||    
T  37182671 attgcaaata 37182680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 44084730 - 44084605
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||| ||||||||||||||| ||||||||||||||||||| | ||||    
T  44084730 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagcctttc 44084631  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  44084630 ttttgaagttttagtgtttatttagt 44084605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 10424354 - 10424429
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  10424354 tcaagtttttcactctcttaatcttatcattagctttgtattagcctttcttttgaagttttagtgtttatttagt 10424429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 51998737 - 51998847
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  51998737 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcggattttgatcttcttaataatttggacccaattatttc 51998836  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  51998837 attgcaaataa 51998847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 29702231 - 29702122
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| | |||| ||||  |||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||   |||||||| |    
T  29702231 aattcaacatgttgaaagcatggcccacatagacacttggcatgttttgattggatgcttggatttttatcttcttaataatttggactcaattatttta 29702132  T
Q  216 ttgcaaataa 225  Q
    ||||||||||    
T  29702131 ttgcaaataa 29702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 42564489 - 42564411
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  42564489 gacacatggcatgttttgattggctgcttggatttttatcttcttaataatttggacccaattatttcattgcaaataa 42564411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 33187638 - 33187715
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||   |||||||||||||||||||    
T  33187638 gacacttggcatgttttgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaata 33187715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 20139978 - 20139854
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttg----gacnnnnnnnntcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| |||||||||||||    ||         ||||||||||||||||||||||| ||||||||||||| | ||||| |||||    
T  20139978 tctctataaatagagacttggatcatttgatttgaacagagaaaaaaaatcaagtttttcactctcttaatcttattattagctttctcttaacttttct 20139879  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    | |||||||||||| ||||||||||    
T  20139878 tctgaagttttagtctttatttagt 20139854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 4873696 - 4873774
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||||||| ||||||    
T  4873696 gacacttggcatgttttgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgtaaataa 4873774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 38571850 - 38571924
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||| |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||    
T  38571850 caagtttttcattctcttaatcttattattagttttctattaacttttcttttgaagttttagtctttatttagt 38571924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 41183692 - 41183570
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| ||||||||||||||| ||| | | ||    
T  41183692 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtgttagcttatc 41183593  T
Q  367 ttttgaagttttagtgtttattt 389  Q
    ||||||||||||||| |||||||    
T  41183592 ttttgaagttttagtctttattt 41183570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 50734593 - 50734483
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||| ||| ||| ||||| |||| |   |   ||||||||||||| |||||||||||||||||||||||||| | ||||||||     
T  50734593 caattcaacatgttgaatgtctggcccatggagatacttagcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttt 50734494  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  50734493 attgcaaataa 50734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 50778262 - 50778372
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||| ||| ||| ||||| |||| |   |   ||||||||||||| |||||||||||||||||||||||||| | ||||||||     
T  50778262 caattcaacatgttgaatgtctggcccatggagatacttagcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttt 50778361  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  50778362 attgcaaataa 50778372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 7008481 - 7008422
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttt 377  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  7008481 caagtttttcactctcttaatcttattattagctttctattaacttttcttttgaagttt 7008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 32119979 - 32120041
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  32119979 tgattggctgcttggatttttatcttcttaataatttggacccaattatttcattgcaaataa 32120041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 41183836 - 41183730
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| |  |||||||| |||||| |||  ||||||||||||||| ||   ||||||||||||| |||||||||||   ||||||||||    
T  41183836 aattcaacatgttgaaagcctggtccacagagacatttgacatgttttgattggctccttgaatttttatcttctcaataatttggactcaattatttca 41183737  T
Q  216 ttgcaaa 222  Q
    |||||||    
T  41183736 ttgcaaa 41183730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 44084836 - 44084774
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  44084836 tgattggctgcttggatttttatcttcttaataatttggaaccaattatttcattgcaaataa 44084774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 55027184 - 55027060
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnnt----caagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||             |||||||||||||||||||||  |||||||| |||| ||||| | |||||    
T  55027184 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttct 55027085  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    ||| |||||||||| ||||||||||    
T  55027084 tttaaagttttagtctttatttagt 55027060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 6044874 - 6044936
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  6044874 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 6044936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 15007566 - 15007492
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||| |||||||||| |||||||| |||| |||||   ||||||||||||||||||| ||||||||||    
T  15007566 caagtttttcattctcttaatcttattattaactttctattagtttttcttttgaagttttagtctttatttagt 15007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 12975351 - 12975290
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  12975351 gattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 12975290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 6833157 - 6833081
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||| ||| |||||  |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  6833157 gacacgtggcatgttacgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 6833081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 10424204 - 10424266
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||| ||||||    
T  10424204 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgaaaataa 10424266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 48886378 - 48886439
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttgga-tcgaattatttcattgcaaataa 225  Q
    |||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  48886378 gattggctgcttggatttttatcttcttaataatttggactcg-attatttcattgcaaataa 48886439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 11908556 - 11908499
Alignment:
Q  166 ttggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  11908556 ttggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 11908499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 51999618 - 51999679
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  51999618 gattggctgcttggatttttatcttcttaataatttggactcaattatttcatagcaaataa 51999679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 49026982 - 49027030
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  49026982 gatttttatcttcttaataatttggactcaattatttcattgcaaataa 49027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 50415363 - 50415410
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||    
T  50415363 gatttttatcttcttaataatttggactcaattatttcattgcaaata 50415410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 26162103 - 26162149
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  26162103 gatttttatcttcttaataatttggactcaattatttcattgcaaat 26162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 26162186 - 26162224
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  26162186 tctctctataaatagagacttggatcatttgatttggac 26162224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 35471882 - 35471928
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  35471882 gatttttatcttcttaataatttggactcaattatttcattgcaaat 35471928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 46572659 - 46572733
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| |||||||| | |||||| |||| ||||| | ||||||||||||||||| | ||| ||||||    
T  46572659 caagtttttcactatcttaatcttgttattatctttctattagcttttcttttgaagttttaatctttttttagt 46572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 29702078 - 29702041
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttgga 307  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29702078 tctctctataaatagagacttggatcatttgatttgga 29702041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 36178028 - 36178089
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   |||||||| || ||||||||    
T  36178028 gattggctgcttggatttttatcttcttaataatttggactcaattattttatagcaaataa 36178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 51305085 - 51305024
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  51305085 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 51305024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 51998624 - 51998682
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  51998624 accatttacaatggcatgttgaatttgcca--------ttcaacatgttgaacccttgttgaaccat 51998682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 4046783 - 4046751
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||||||||||||||||    
T  4046783 gccattcaacatgttgaacccttgttgaaccat 4046751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 4873806 - 4873842
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4873806 tctctataaatagagacttggatcatttgatttggac 4873842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 7008640 - 7008576
Alignment:
Q  161 tttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||  |||||||||| |||||||| ||||||   |||||||||||| |||||||    
T  7008640 tttgattggctgcttggatttttatcatcttaatattttggactcaattatttcattacaaataa 7008576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 20140084 - 20140024
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||| ||||||  ||||||||||||||||||||||| ||   |||||||||||||||||||    
T  20140084 gattcgctgcttggatttttatcttcttaataatttagactcaattatttcattgcaaata 20140024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 30415016 - 30415064
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  30415016 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 30415064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 30415110 - 30415146
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30415110 tctctataaatagagacttggatcatttgatttggac 30415146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 31169823 - 31169883
Alignment:
Q  165 attggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||  ||||||||||||||||||||||||||    |||||||||||| ||||||    
T  31169823 attggctgcttggatttttatcttcttaataatttggactctattatttcattgtaaataa 31169883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 38571796 - 38571832
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38571796 tctctataaatagagacttggatcatttgatttggac 38571832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 6832983 - 6832948
Alignment:
Q  318 caagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||| |||||||||||||    
T  6832983 caagtttttcactctcttaatcttattattagcttt 6832948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 307
Target Start/End: Complemental strand, 7008539 - 7008504
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttgga 307  Q
    |||||||||||||||||||| |||||||||||||||    
T  7008539 tctctataaatagagacttggatcatttgatttgga 7008504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 25787409 - 25787444
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25787409 ctctataaatagagacttggatcatttgatttggac 25787444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 25829366 - 25829401
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25829366 ctctataaatagagacttggatcatttgatttggac 25829401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 33934896 - 33934931
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33934896 ctctataaatagagacttggatcatttgatttggac 33934931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 35540268 - 35540303
Alignment:
Q  318 caagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||| |||||||||||||    
T  35540268 caagtttttcactctcttaatcttattattagcttt 35540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 42598064 - 42598099
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42598064 ctctataaatagagacttggatcatttgatttggac 42598099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 43475786 - 43475751
Alignment:
Q  318 caagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||| |||||||||||||    
T  43475786 caagtttttcactctcttaatcttattattagcttt 43475751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 43475842 - 43475803
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  43475842 ctctctctataaatagagactttgatcatttgatttggac 43475803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 35540099 - 35540177
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| |||||  |||||||||||  |||| ||||| ||| |||| ||||||   ||||||||||||||||||||    
T  35540099 gacacttggcatgttacgattggctgcttcgattcttatcatctcaatattttggactcaattatttcattgcaaataa 35540177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 46136992 - 46137034
Alignment:
Q  350 ctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||    
T  46136992 ctttttattagcatttcttttgaagttttagtctttatttagt 46137034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 49406876 - 49406942
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| ||||| ||||  ||||||||||| ||||||||||||| |   ||||||||||||||||||||    
T  49406876 gtttcgattgactgcatagatttttatcatcttaataatttgaactcaattatttcattgcaaataa 49406942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 350
Target Start/End: Original strand, 31169964 - 31169997
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagc 350  Q
    ||||||||||||||||||||||| ||||||||||    
T  31169964 tcaagtttttcactctcttaatcttattattagc 31169997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 55027284 - 55027223
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  |||||||||| |||||||| ||| ||   ||||||||||||||||||||    
T  55027284 gattggctgcttggatttttatcatcttaatattttagactcaattatttcattgcaaataa 55027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 5844671 - 5844707
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  5844671 tctctataaatagagacttggttcatttgatttggac 5844707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 10424303 - 10424339
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| || |||||||||||||    
T  10424303 tctctataaatagagacttggattatttgatttggac 10424339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 12975250 - 12975214
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  12975250 tctctacaaatagagacttggatcatttgatttggac 12975214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 17469837 - 17469801
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  17469837 tctctataaatagagacttggttcatttgatttggac 17469801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 27848098 - 27848050
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||| ||   ||||||||||||||||||||    
T  27848098 gatttttatcttcttaatactttagactcaattatttcattgcaaataa 27848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 29702027 - 29701991
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||||  ||||||||||||    
T  29702027 tcaagtttttcactctcttaatctcattattagcttt 29701991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 30688554 - 30688590
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||| |||| |||||||||||||||    
T  30688554 tctctataaatagagatttgattcatttgatttggac 30688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 31169914 - 31169950
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31169914 tctctacaaatagagacttggatcatttgatttggac 31169950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 35471966 - 35472002
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  35471966 tctctacaaatagagacttggatcatttgatttggac 35472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 42602291 - 42602255
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  42602291 tctctataaatagagacttggttcatttgatttggac 42602255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 46136837 - 46136885
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  46136837 gatttttatcatcttaatattttggactcaattatttcattgcaaataa 46136885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 46136921 - 46136957
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| || |||||||||||||    
T  46136921 tctctataaatagagacttggataatttgatttggac 46136957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 47147694 - 47147658
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  47147694 tctctataaatagagacttggttcatttgatttggac 47147658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 49407022 - 49407058
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagcttt 353  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  49407022 tcaagtttttcaccctcttaatcttattattagcttt 49407058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 50034713 - 50034677
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  50034713 tctctataaatagagacttggttcatttgatttggac 50034677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 50734684 - 50734652
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||| ||||||||||||    
T  50734684 gccattcaacatgttgaacctttgttgaaccat 50734652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 50778171 - 50778203
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||| ||||||||||||    
T  50778171 gccattcaacatgttgaacctttgttgaaccat 50778203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 23648562 - 23648672
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  23648562 caattcaacatgttgaatgtctggcccacggagacacttggcatgttttgattggctgctcgtatttttatcttcttaataatttggatctaattatttc 23648661  T
Q  215 attgcaaataa 225  Q
    |||| ||||||    
T  23648662 attgtaaataa 23648672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 23810010 - 23809900
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  23810010 caattcaacatgttgaatgtctggcccacggagacacttggcatgttttgattggctgctcgtatttttatcttcttaataatttggatctaattatttc 23809911  T
Q  215 attgcaaataa 225  Q
    |||| ||||||    
T  23809910 attgtaaataa 23809900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 13592416 - 13592526
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||   |||||||||    
T  13592416 caattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcggatttttaacttcttaataatttggactcaattatttc 13592515  T
Q  215 attgcaaataa 225  Q
    |||| ||||||    
T  13592516 attgaaaataa 13592526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 13592564 - 13592689
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  13592564 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcatattattagctttgtattagcctttc 13592663  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  13592664 ttttgaagttttagtgtttatttagt 13592689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 19241729 - 19241606
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn---tcaagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||| ||||||||||||||||           ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||    
T  19241729 tctctataaatagagacttggatcatttgatttggacatagaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 19241630  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||    
T  19241629 ttgaagttttagtgtttatttagt 19241606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 42318306 - 42318182
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    ||||||||||||||||||| |||||||||||||||||            |||| |||||||||||||||||| ||||||||||||||||||| | |||||    
T  42318306 tctctataaatagagacttaaatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttct 42318207  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  42318206 tttgaagttttagtgtttatttagt 42318182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 29616190 - 29616265
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  29616190 tcaagtttttcaccctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtttatttagt 29616265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 23648761 - 23648836
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||| || ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  23648761 tcaagttttttaccctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtttatttagt 23648836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 23809860 - 23809736
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac----nnnnnnnntcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||  ||||||||||||||||            |||||||||| || ||||||||| ||||||||||||||||||| | |||||    
T  23809860 tctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagttttttaccctcttaatcttattattagctttgtattagcctttct 23809761  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  23809760 tttgaagttttagtgtttatttagt 23809736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 7651550 - 7651441
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| | |||| ||||  |||||||||  ||||||||||||| ||||  ||||||||||||||||||||||||||   |||||||| |    
T  7651550 aattcaacatgttgaaagcatggcccacatagacacttgacatgttttgattggatgcttggatttttatcttcttaataatttggactcaattatttta 7651451  T
Q  216 ttgcaaataa 225  Q
    ||||||||||    
T  7651450 ttgcaaataa 7651441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 31007897 - 31008006
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| | |||| ||||  |||||||||| ||||||||||||| ||||  |||||||||||| |||||||||||||   |||||||| |    
T  31007897 aattcaacatgttgaaagcatggcccacatagacacttggcatgttttgattggatgcttggatttttatctttttaataatttggactcaattatttta 31007996  T
Q  216 ttgcaaataa 225  Q
    ||||||||||    
T  31007997 ttgcaaataa 31008006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 31008052 - 31008173
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            |||||||||||||||||||||||  |||||||||||| ||||| | |||||    
T  31008052 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatctcattattagctttatattagcttttct 31008151  T
Q  368 tttgaagttttagtgtttattt 389  Q
    |||||||||||||| |||||||    
T  31008152 tttgaagttttagtctttattt 31008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 29616024 - 29616091
Alignment:
Q  157 atgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||||    
T  29616024 atgttttgattggctgcttggatttttatcttcttaataatttggacccaattatttcattgcaaata 29616091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 36572102 - 36572175
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||| |||||||||||  ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  36572102 caagtttttaactctcttaatt-tattattagctttctattaacttttcttttgaagttttagtctttatttagt 36572175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 42804323 - 42804401
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||   ||||||||||||||||||||    
T  42804323 gacacttggcatgttttgattggctacttgaatttttatcttcttaataatttggactcaattatttcattgcaaataa 42804401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 30644739 - 30644812
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttag 391  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| | ||||||||||||||||||| | |||||||    
T  30644739 caagtttttcactcttttaatcttattattagctttctattagcttttcttttgaagttttagtctctatttag 30644812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 19241837 - 19241775
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  19241837 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 19241775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 3455346 - 3455287
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  3455346 gattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 3455287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 8681015 - 8681076
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    ||||||||||||| |||||||| | |||||| |||| ||||||| |||||||||||||||||    
T  8681015 caagtttttcactatcttaatcttgttattatctttctattaacttttcttttgaagtttta 8681076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 25670361 - 25670422
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  25670361 gattggctgcttggatttttatcttcttaataatttggactcaattatttcatagcaaataa 25670422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 32363006 - 32363067
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||| ||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  32363006 gattggctacttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 32363067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 39009032 - 39008972
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||| ||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  39009032 tgattggctacttggatttttatcttcttaataatttggactcaattatttcattgcaaat 39008972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 27407473 - 27407548
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||| |||||||| | |||||| |||| || |||| ||||||||||||||||| | ||| ||||||    
T  27407473 tcaagtttttcactatcttaatcttgttattatctttctaataacttttcttttgaagttttaatctttttttagt 27407548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 34529113 - 34529188
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||| |||||||| | |||||| |||| ||||| | ||||||||||||||||| | ||| ||||||    
T  34529113 tcaagtttttcactatcttaatcttgttattatctttctattagcttttcttttgaagttttaatctttttttagt 34529188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 36571941 - 36572004
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaa 222  Q
    |||| |||||||||||  |||||||||| |||||||| |||||||  |||||||||||||||||    
T  36571941 gtttcgattggctgcttggatttttatcatcttaatattttggattcaattatttcattgcaaa 36572004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 39239076 - 39239009
Alignment:
Q  158 tgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| ||||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  39239076 tgttatgattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 39239009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 42804440 - 42804521
Alignment:
Q  275 ctataaatagagacttgaatcatttgatttggac---nnnnnnnntcaagtttttcactctcttaatcatattattagcttt 353  Q
    ||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||| |||| ||||||||    
T  42804440 ctataaatagagacttgaatcatttgatttggacacagaaaaaaatcaagtttttcactctcttaatcttattgttagcttt 42804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 4218985 - 4219030
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||||||||||||||||   ||||||||||||||||||    
T  4218985 atttttatcttcttaataatttggactcaattatttcattgcaaat 4219030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 23090057 - 23090000
Alignment:
Q  166 ttggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||  || |||||||||||||||||||||||   ||||||||||||||||||    
T  23090057 ttggctgcttggagttttatcttcttaataatttggactcaattatttcattgcaaat 23090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 23648473 - 23648505
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||||||||||||||||    
T  23648473 gccattcaacatgttgaacccttgttgaaccat 23648505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 23810099 - 23810067
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||||||||||||||||    
T  23810099 gccattcaacatgttgaacccttgttgaaccat 23810067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 27946128 - 27946080
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  27946128 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 27946080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 32972943 - 32972991
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  32972943 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 32972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 32973037 - 32973073
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32973037 tctctataaatagagacttggatcatttgatttggac 32973073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 36572051 - 36572087
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  36572051 tctctataaatagagacttggatcatttgatttggac 36572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 40892213 - 40892177
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40892213 tctctataaatagagacttggatcatttgatttggac 40892177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 40892299 - 40892251
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  40892299 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 40892251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 42318399 - 42318351
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  42318399 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 42318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 3455248 - 3455213
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3455248 ctctataaatagagacttggatcatttgatttggac 3455213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 4580429 - 4580394
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4580429 ctctataaatagagacttggatcatttgatttggac 4580394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 4938462 - 4938427
Alignment:
Q  318 caagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||| |||||||||||||    
T  4938462 caagtttttcactctcttaatcttattattagcttt 4938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 307
Target Start/End: Complemental strand, 7651394 - 7651359
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttgga 307  Q
    |||||||||||||||||||| |||||||||||||||    
T  7651394 tctctataaatagagacttggatcatttgatttgga 7651359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 9958194 - 9958147
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||||||||||||||||   ||||||||||| ||||||||    
T  9958194 atttttatcttcttaataatttggactcaattatttcatagcaaataa 9958147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 13479091 - 13479198
Alignment:
Q  118 ttcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcatt 217  Q
    |||||||||||||| || ||| || | | ||||| |||  ||||  |||||||||||   |||||||| ||||||||||||||||   |||||||||||     
T  13479091 ttcaacatgttgaaagtctggcccgcagtgacacgtggcttgttacgattggctgcttgaatttttattttcttaataatttggactcaattatttcata 13479190  T
Q  218 gcaaataa 225  Q
    ||||||||    
T  13479191 gcaaataa 13479198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 27405739 - 27405798
Alignment:
Q  166 ttggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||  |||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  27405739 ttggctgcttggatttttatcatcttaatattttggactcaattatttcattgcaaataa 27405798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 27405837 - 27405872
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||| |||||||||||||||||    
T  27405837 ctctataaatagagacttaaatcatttgatttggac 27405872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 27946041 - 27946006
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27946041 ctctataaatagagacttggatcatttgatttggac 27946006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 31011730 - 31011765
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31011730 ctctataaatagagacttggatcatttgatttggac 31011765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 308
Target Start/End: Complemental strand, 15973005 - 15972971
Alignment:
Q  274 tctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| |||||||||||||||    
T  15973005 tctataaatagagacttgattcatttgatttggac 15972971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 13592311 - 13592344
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattca 81  Q
    |||||||||||||||| |||||||||||||||||    
T  13592311 accatttacaatggcatgttgaatttgccattca 13592344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 13592710 - 13592747
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttg 354  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  13592710 tcaagtttttcactctcttaatcttattattagatttg 13592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 39008852 - 39008815
Alignment:
Q  355 tattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  39008852 tattaacatttcttttgaagttttagtctttgtttagt 39008815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 4219067 - 4219103
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4219067 tctctacaaatagagacttggatcatttgatttggac 4219103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 4938512 - 4938476
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  4938512 tctctataaataaagacttggatcatttgatttggac 4938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 7827534 - 7827498
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  7827534 tctctataaatagagacttggttcatttgatttggac 7827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 9958104 - 9958072
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttg 305  Q
    ||||||||||||||||||| |||||||||||||    
T  9958104 ctctataaatagagacttggatcatttgatttg 9958072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 23648712 - 23648748
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23648712 tctctataaatagagacttagatcatttgatttggac 23648748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 25033609 - 25033573
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  25033609 tctctataaatagagacttggttcatttgatttggac 25033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 25653245 - 25653209
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  25653245 tctctataaatagagacttggttcatttgatttggac 25653209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 25670459 - 25670495
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  25670459 tctctataaatagagacttggatcatttcatttggac 25670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 29616134 - 29616170
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  29616134 tctctataaatagagactttgatcatttgatttggac 29616170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 30644687 - 30644723
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  30644687 tctctataaattgagacttggatcatttgatttggac 30644723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 32363107 - 32363143
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  32363107 tctctacaaatagagacttggatcatttgatttggac 32363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 41152526 - 41152562
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  41152526 tctctataaatagagacttggttcatttgatttggac 41152562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 8e-37; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 44280683 - 44280573
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| |||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  44280683 caattcaacatgttgaatgcctggcccacggagacacttgacatgttttgattggctgctcggatttttatcttcttaataatttggacccaattatttc 44280584  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  44280583 attgcaaataa 44280573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 392
Target Start/End: Complemental strand, 14383391 - 14383268
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    ||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  14383391 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 14383292  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||    
T  14383291 ttgaagttttagtgtttatttagt 14383268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 22349551 - 22349675
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||| ||||||||||||||| | |||||    
T  22349551 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 22349650  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  22349651 tttgaagttttagtgtttatttagt 22349675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 36527243 - 36527117
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac------nnnnnnnntcaagtttttcactctcttaatcatattattagctttgtattaacattt 365  Q
    |||||||||||||||||||| ||||||||||||||||              ||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  36527243 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 36527144  T
Q  366 cttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||||    
T  36527143 cttttgaagttttagtgtttatttagt 36527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 44280539 - 44280415
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| |||||||||||||||||||   |||||    
T  44280539 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtctttct 44280440  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  44280439 tttgaagttttagtgtttatttagt 44280415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 36527390 - 36527280
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  36527390 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttc 36527291  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  36527290 attgcaaataa 36527280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 14383549 - 14383439
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||| ||||||||||   |   ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  14383549 caattcaacatgttgaatgcctggcccacgaagacacttggcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttc 14383450  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  14383449 attgcaaataa 14383439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 43022063 - 43021988
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  43022063 tcaagtttttcactctcttaatcttatcattagatttgtattagcctttcttttgaagttttagtgtttatttagt 43021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 1072711 - 1072836
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| |||||||| |||| ||||| | ||||    
T  1072711 tctctataaatagagacttggatcatttgatttggacacagagaaaaaaatcaagtttttcactctcttaatcttattattatctttctattagcttttc 1072810  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    |||| |||||||||| ||||||||||    
T  1072811 ttttaaagttttagtctttatttagt 1072836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 22349444 - 22349506
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  22349444 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 22349506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 43022211 - 43022149
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  43022211 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 43022149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 17928747 - 17928807
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  17928747 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 17928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 13151156 - 13151222
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| |   ||||||||||||||||||||    
T  13151156 gtttcgattggctgcttagatttttatcatcttaataatttgaactcaattatttcattgcaaataa 13151222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 5144920 - 5144979
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttgga-tcgaattatttcattgcaaat 223  Q
    |||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  5144920 gattggctgcttcgatttttatcttcttaataatttggactcg-attatttcattgcaaat 5144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 39490652 - 39490592
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||   |||||||||||||||||||||||||   ||||||||||||||||||    
T  39490652 tgattggctgcttgaatttttatcttcttaataatttggactcaattatttcattgcaaat 39490592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 6363919 - 6363841
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||||||  |||||||||||  |||||||||| |||||||| ||| ||   |||||||| |||||||||||    
T  6363919 gacacttggtatgttacgattggctgcttcgatttttatcatcttaatattttagactcaattatttaattgcaaataa 6363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 36209036 - 36209082
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  36209036 gatttttatcttcttaataatttggactcaattatttcattgcaaat 36209082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 1308244 - 1308289
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||||||||||||||||   ||||||||||||||||||    
T  1308244 atttttatcttcttaataatttggactcaattatttcattgcaaat 1308289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 14383665 - 14383607
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||    
T  14383665 accatttacaatggcatgttgaatttgccattca--------acatgttgaacccttgttgaaccat 14383607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 36527507 - 36527449
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||    
T  36527507 accatttacaatggcatgttgaatttgccattca--------acatgttgaacccttgttgaaccat 36527449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 44280799 - 44280741
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||    
T  44280799 accatttacaatggcatgttgaatttgccattca--------acatgttgaacccttgttgaaccat 44280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 4279464 - 4279428
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagcttt 353  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4279464 tcaagtttttcactctcttaatcttattattagcttt 4279428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 7585089 - 7585137
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  7585089 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 7585137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 7585183 - 7585219
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7585183 tctctataaatagagacttggatcatttgatttggac 7585219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 9118196 - 9118132
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtg 382  Q
    |||||||||||||||||||||  |||||||| |||| ||||| | ||| |||| |||||||||||    
T  9118196 caagtttttcactctcttaatattattattatctttctattagcttttattttaaagttttagtg 9118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 9118247 - 9118211
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9118247 tctctataaatagagacttggatcatttgatttggac 9118211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 14151938 - 14151974
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagcttt 353  Q
    ||||||||||||||||||||||| |||||||||||||    
T  14151938 tcaagtttttcactctcttaatcttattattagcttt 14151974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 39432411 - 39432447
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39432411 tctctataaatagagacttggatcatttgatttggac 39432447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 43022115 - 43022079
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  43022115 tctctataaatagagacttggatcatttgatttggac 43022079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 9072621 - 9072656
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9072621 ctctataaatagagacttggatcatttgatttggac 9072656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 12858311 - 12858276
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12858311 ctctataaatagagacttggatcatttgatttggac 12858276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 30819318 - 30819353
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30819318 ctctataaatagagacttggatcatttgatttggac 30819353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 926499 - 926537
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  926499 tctctctataaatagagacttggttcatttgatttggac 926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 7762753 - 7762799
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||    
T  7762753 atttttatcttcttaataatttggactcaattatttcatagcaaata 7762799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 17486319 - 17486261
Alignment:
Q  165 attggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||   |||||||||||||||||||||||||   |||||||||| |||||||    
T  17486319 attggctgcttgaatttttatcttcttaataatttggactcaattatttcagtgcaaat 17486261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 31184935 - 31184973
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  31184935 tctctctataaatagagacttggttcatttgatttggac 31184973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 9118347 - 9118286
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  |||||||||| |||||||| ||| ||   ||||||||||||||||||||    
T  9118347 gattggctgcttggatttttatcatcttaatattttagactcaattatttcattgcaaataa 9118286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 14151816 - 14151869
Alignment:
Q  171 tgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||| ||||||||||| ||||||||||||| |   |||||||||||||||||||    
T  14151816 tgcttagatttttatcatcttaataatttgaactcaattatttcattgcaaata 14151869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 44280394 - 44280357
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttg 354  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44280394 tcaagtttttcactctcttaatcttattattagatttg 44280357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 1308330 - 1308366
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  1308330 tctctacaaatagagacttggatcatttgatttggac 1308366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 4296302 - 4296338
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  4296302 tctctataaatagagacttggttcatttgatttggac 4296338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 350
Target Start/End: Original strand, 5145077 - 5145109
Alignment:
Q  318 caagtttttcactctcttaatcatattattagc 350  Q
    |||||||||||||||||||||| ||||||||||    
T  5145077 caagtttttcactctcttaatcttattattagc 5145109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 7762832 - 7762868
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  7762832 tctctacaaatagagacttggatcatttgatttggac 7762868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 8855420 - 8855384
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  8855420 tctctataaatagagacttggttcatttgatttggac 8855384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 13151231 - 13151263
Alignment:
Q  272 tctctataaatagagacttgaatcatttgattt 304  Q
    |||||||||||||||||||| ||||||||||||    
T  13151231 tctctataaatagagacttggatcatttgattt 13151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 17928854 - 17928890
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  17928854 tctctacaaatagagacttggatcatttgatttggac 17928890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 36855055 - 36855091
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  36855055 tctctataaatagagacttggttcatttgatttggac 36855091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 52773463 - 52773353
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||  |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||    
T  52773463 caattcaacatgttgaatgcctggcccacatagacacttggcatgttttgattggctgctcgaatttttatcttcttaataatttggacctaattatttc 52773364  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  52773363 attgcaaataa 52773353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 392
Target Start/End: Complemental strand, 52773309 - 52773188
Alignment:
Q  276 tataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttctttt 370  Q
    |||||||||||||||||||||||||||||||||             ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  52773309 tataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcatttctttt 52773210  T
Q  371 gaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||    
T  52773209 gaagttttagtgtttatttagt 52773188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 55549553 - 55549663
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||| ||| ||||||||||||||||  ||  ||||||| ||||||  ||||||||||||||||||||||||| | |||||||||    
T  55549553 caattcaacatgttgaatgtctggcccacggagacacttggcgtgcgttgattgactgctcgaatttttatcttcttaataatttggacccaattatttc 55549652  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  55549653 attgcaaataa 55549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 55549751 - 55549824
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttattta 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55549751 tcaagtttttcactctcttaatcttattattagctttgtattaacctttcttttgaagttttagtgtttattta 55549824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 8995176 - 8995052
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||| ||||||||||||||| | |||||    
T  8995176 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 8995077  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  8995076 tttgaagttttagtgtttatttagt 8995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 16021262 - 16021138
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||| ||||||||| | |||||    
T  16021262 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagatttgtattagcctttct 16021163  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  16021162 tttgaagttttagtgtttatttagt 16021138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 34463237 - 34463312
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  34463237 tcaagtttttcactctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtttatttagt 34463312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 3529907 - 3530032
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| ||| ||||||||||||||| | ||||    
T  3529907 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttc 3530006  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  3530007 ttttgaagttttagtgtttatttagt 3530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 13113955 - 13113830
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggacnnnnnnnn---tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||||| ||||||||||||||||           |||||| |||||||||||||||  |||||||||||||||||||   ||||    
T  13113955 tctctctataaatagagacttggatcatttgatttggacacagaaaaaaatcaagtatttcactctcttaatattattattagctttgtattagtctttc 13113856  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||    
T  13113855 ttttgaagttttagtgtttatttagt 13113830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 40721384 - 40721311
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttattta 390  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  40721384 tcaagtttttcactctcttaatcttatcattagctttgtattagcctttcttttgaagttttagtgtttattta 40721311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 34198957 - 34199032
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| |||||||||    
T  34198957 tcaagtttttcactctcttaatcttatcattagctttgtattagcctttcttttgaagttttagtgcttatttagt 34199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 23539371 - 23539445
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||| ||||||||||    
T  23539371 caagtttttcactctcttaatcttattattagctttctattagcttttcttttgaagttttagtctttatttagt 23539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 33077397 - 33077475
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  33077397 gacacttggcatgttttgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 33077475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 38174112 - 38174003
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| |  ||| |||| ||||||| ||  |||||||||||| |||||  ||||||||||||||||||||||||||   ||||||||||    
T  38174112 aattcaacatgttgaaagcttggcccacagagacacctgacatgttttgattgactgcttggatttttatcttcttaataatttggactcaattatttca 38174013  T
Q  216 ttgcaaataa 225  Q
    ||||||||||    
T  38174012 ttgcaaataa 38174003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 28901487 - 28901413
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||| ||||||||||||| |||||   ||||||||||||||||||| ||||||||||    
T  28901487 caagtttttcactctcttaatcttattattagctttctattagtttttcttttgaagttttagtctttatttagt 28901413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 52018217 - 52018110
Alignment:
Q  116 aattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttca 215  Q
    |||||||||||||||| |  ||| ||||  |||||||||| ||||||||||||||||||   ||||||||||||| |||||||||||   ||||||||||    
T  52018217 aattcaacatgttgaaagcctggcccac--agacacttggcatgttttgattggctgcttgaatttttatcttctcaataatttggactcaattatttca 52018120  T
Q  216 ttgcaaataa 225  Q
    ||||||||||    
T  52018119 ttgcaaataa 52018110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 56054670 - 56054551
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnnt---caagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||| ||||||||||||||||            |||||||||||||||||||||| ||||||||||||| ||||    ||||||    
T  56054670 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaccaagtttttcactctcttaatcttattattagctttctatt----tttctt 56054575  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| ||||||||||    
T  56054574 ttgaagttttagtttttatttagt 56054551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 31336234 - 31336308
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||| || |||||||||| |||||   ||||||||||||||||||| ||||||||||    
T  31336234 caagtttttcactctcttaatcttagtattagctttctattagtttttcttttgaagttttagtctttatttagt 31336308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 3529802 - 3529864
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  3529802 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 3529864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 8995283 - 8995221
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  8995283 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 8995221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 34198800 - 34198862
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  34198800 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 34198862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 34463085 - 34463147
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||| |  |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  34463085 tgattggctgtttcgatttttatcttcttaataatttggacccaattatttcattgcaaataa 34463147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 40721534 - 40721472
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  40721534 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 40721472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 13114065 - 13113989
Alignment:
Q  146 agacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||| ||| ||||||||||||||||||  ||||||||||||   ||||||||||| | ||||||||||||||||||||    
T  13114065 agacacatggcatgttttgattggctgcttggatttttatctt---aataatttggacccaattatttcattgcaaataa 13113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 33609480 - 33609420
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||||||||||  ||||||||||||||||||||||||||   |||||||||||||||||||    
T  33609480 gattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaata 33609420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 13093671 - 13093778
Alignment:
Q  118 ttcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcatt 217  Q
    |||||||||||||| |||||| || | | ||||| |||  ||||  ||||||||| |  ||||||||| |||||||||||||||||  |||||||||||     
T  13093671 ttcaacatgttgaaagtatggcccgcagtgacacgtggcttgttacgattggctgtttggatttttattttcttaataatttggattcaattatttcata 13093770  T
Q  218 gcaaataa 225  Q
    ||||||||    
T  13093771 gcaaataa 13093778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 4982167 - 4982121
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  4982167 gatttttatcttcttaataatttggattcaattatttcattgcaaat 4982121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 16021418 - 16021308
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| |||| |||||||||||   |   |||||| |||||  |||||||||||| ||||||||||| | | ||||||||     
T  16021418 caattcaacatgttgaatgcctggcccacagagacacttggcgcgcgctgattgactgcttggatttttatctttttaataatttgaacccaattatttt 16021319  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  16021318 attgcaaataa 16021308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 28447649 - 28447611
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28447649 tctctctataaatagagacttgaatcatttgatttggac 28447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 33523902 - 33523841
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| |  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  33523902 gattggctgtttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 33523841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 48403456 - 48403517
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  48403456 gattggctgcttggatttttatcttcttaataatttggactcaattatttcatagcaaataa 48403517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 53347244 - 53347305
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||   |||||||||||||||||||||||||   ||||||||||||||||||||    
T  53347244 gattggctgcttgaatttttatcttcttaataatttggactcaattatttcattgcaaataa 53347305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 16171459 - 16171507
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  16171459 gatttttatcttcttaataatttggactcaattatttcattgcaaataa 16171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 18468907 - 18468967
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||| ||||    
T  18468907 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgaaaat 18468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 23539222 - 23539282
Alignment:
Q  165 attggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||| ||||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  23539222 attggctgcttagatttttatcatcttaatattttggactcaattatttcattgcaaataa 23539282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 19273484 - 19273377
Alignment:
Q  118 ttcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcatt 217  Q
    |||||||||||||| |  ||| || | | ||||| |||| ||||  |||||||||||  ||||||||| ||||||||||||||||   |||||||||||     
T  19273484 ttcaacatgttgaaagcctggcccgcagtgacacgtggtttgttacgattggctgcttggatttttattttcttaataatttggactcaattatttcata 19273385  T
Q  218 gcaaataa 225  Q
    ||||||||    
T  19273384 gcaaataa 19273377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 55549434 - 55549494
Alignment:
Q  46 taaccatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  55549434 taaccatttacaatggcatgttgaatttgcca--------ttcaacatgttgaacccttgttgaaccat 55549494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 23389514 - 23389576
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||| |||||  |||||||||||||||||| |||||||   ||||||||||||||||||||    
T  23389514 tgattgactgcttggatttttatcttcttaattatttggactcaattatttcattgcaaataa 23389576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 28901541 - 28901503
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  28901541 tctctctataaatagagacttggatcatttgatttggac 28901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 33077556 - 33077598
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtatta 359  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  33077556 tcaaatttttcactctcttaatcttattattagctttgtatta 33077598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 34434082 - 34434160
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| |||||  ||||||||||| ||||||||||  |||||||| ||||||   ||||||||||||| ||||||    
T  34434082 gacacttggcatgttacgattggctgcttagatttttattatcttaatattttggactcaattatttcattgaaaataa 34434160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 38173960 - 38173877
Alignment:
Q  274 tctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| |||||||||||||    
T  38173960 tctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagcttt 38173877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 48403553 - 48403591
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  48403553 tctctttataaatagagacttgaatcatttgatttggac 48403591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35809916 - 35809855
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  35809916 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 35809855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 56054769 - 56054708
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  |||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  56054769 gattggctgcttggatttttatcatcttaatattttggactcaattatttcattgcaaataa 56054708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 3614805 - 3614853
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  3614805 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 3614853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 3614898 - 3614934
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3614898 tctctataaatagagacttggatcatttgatttggac 3614934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 16171541 - 16171577
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16171541 tctctataaatagagacttggatcatttgatttggac 16171577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 21654501 - 21654537
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  21654501 tctctataaatagagacttggatcatttgatttggac 21654537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 31336181 - 31336217
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31336181 tctctataaatagagacttggatcatttgatttggac 31336217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 31848452 - 31848488
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31848452 tctctataaatagagacttggatcatttgatttggac 31848488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 48506244 - 48506280
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  48506244 tctctataaatagagacttggatcatttgatttggac 48506280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 48506295 - 48506359
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtg 382  Q
    |||||||||||||||||||||  |||||||| |||| ||||| | ||| |||| |||||||||||    
T  48506295 caagtttttcactctcttaatattattattatctttctattagcttttattttaaagttttagtg 48506359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 28901303 - 28901253
Alignment:
Q  341 tattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| ||||| | ||||||||||||||||||| ||||||||||    
T  28901303 tattattagctttctattagc-tttcttttgaagttttagtctttatttagt 28901253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 17329551 - 17329589
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  17329551 tctctctacaaatagagacttggatcatttgatttggac 17329589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 28447761 - 28447683
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| |||| |||||  |||||||||||  |||||||||  |||||||| ||||||   ||||||||||||||||||||    
T  28447761 gacatttggcatgttacgattggctgcttcgatttttattatcttaatactttggactcaattatttcattgcaaataa 28447683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 28901641 - 28901575
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| |||||||||||  |||||||||| |||||||| |||| |   ||||||||||||||||||||    
T  28901641 gtttcgattggctgcttggatttttatcatcttaatattttgcactcaattatttcattgcaaataa 28901575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 33607430 - 33607392
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  33607430 tctctctataaatagagactttgatcatttgatttggac 33607392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 12159166 - 12159129
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttgga 307  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  12159166 tctctctataaatagagacttggttcatttgatttgga 12159129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 27864433 - 27864372
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||   |||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  27864433 gattggctgcttgaatttttattttcttaataatttggactcaattatttcatagcaaataa 27864372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 48506144 - 48506205
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  |||||||||| |||||||| ||| ||   ||||||||||||||||||||    
T  48506144 gattggctgcttggatttttatcatcttaatattttagactcaattatttcattgcaaataa 48506205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 52773167 - 52773130
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttg 354  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  52773167 tcaagtttttcactctcttaatcttattattagatttg 52773130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 53347415 - 53347452
Alignment:
Q  355 tattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  53347415 tattagcatttcttttgaagttttagtctttatttagt 53347452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 2211995 - 2212031
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  2211995 tctctataaatagagacttggttcatttgatttggac 2212031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 17329469 - 17329509
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcatt 217  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  17329469 gatttttatcttcttaataatttggactcaattatttcatt 17329509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 23389621 - 23389657
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  23389621 tctctacaaatagagacttggatcatttgatttggac 23389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 33077507 - 33077543
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  33077507 tctctataaataaagacttggatcatttgatttggac 33077543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 34463188 - 34463224
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| || |||||||||||||    
T  34463188 tctctataaatagagacttggattatttgatttggac 34463224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 40596413 - 40596449
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  40596413 tctctataaatagagacttggttcatttgatttggac 40596449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 45081127 - 45081163
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  45081127 tctctataaatagagactttgatcatttgatttggac 45081163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 46914189 - 46914225
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46914189 tctctataaatagagacttggttcatttgatttggac 46914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 350
Target Start/End: Original strand, 53347389 - 53347421
Alignment:
Q  318 caagtttttcactctcttaatcatattattagc 350  Q
    |||||||||||||||||||||| ||||||||||    
T  53347389 caagtttttcactctcttaatcttattattagc 53347421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 55549702 - 55549738
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| || |||||||||||||    
T  55549702 tctctataaatagagacttggataatttgatttggac 55549738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 37690945 - 37691068
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn---tcaagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||| ||||||||||||||||           ||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  37690945 tctctataaatagagacttggatcatttgatttggacacagaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 37691044  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||    
T  37691045 ttgaagttttagtgtttatttagt 37691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 31159805 - 31159730
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31159805 tcaagtttttcactctcttaatcttattattagctttgtattagcatttcttttgaagttttagtgtttatttagt 31159730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 45623180 - 45623304
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  45623180 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttct 45623279  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  45623280 tttgaagttttagtgtttatttagt 45623304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 48384828 - 48384952
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||| ||||||||||||||| | |||||    
T  48384828 tctctataaatagagacttggatcatttgatttggacgcagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 48384927  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  48384928 tttgaagttttagtgtttatttagt 48384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 51494123 - 51494247
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||| ||||||||| | |||||    
T  51494123 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagttttgtattagcctttct 51494222  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  51494223 tttgaagttttagtgtttatttagt 51494247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 45623025 - 45623135
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  45623025 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttc 45623124  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  45623125 attgcaaataa 45623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 51493967 - 51494077
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   ||  |||||| |||||| |||||||||||||||||||||||||| | |||||||||    
T  51493967 caattcaacatgttgaatgcctggcccacggagacacttggcgcgtgctgattgactgctcggatttttatcttcttaataatttggacccaattatttc 51494066  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  51494067 attgcaaataa 51494077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 29919792 - 29919666
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacattt 365  Q
    |||||||||||||||||||||| ||||||||||||| ||            |||| |||||||||||||||||| ||||||||||||||||||| | |||    
T  29919792 tctctctataaatagagacttggatcatttgatttgaacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagccttt 29919693  T
Q  366 cttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||||    
T  29919692 cttttgaagttttagtgtttatttagt 29919666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 14097059 - 14096984
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  14097059 tcaagtttttcactctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgttaatttagt 14096984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 19578613 - 19578687
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  19578613 caagtttttcactctcttaatcttattattagttttgtattagcctttcttttgaagttttagtgtttatttagt 19578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 29919938 - 29919828
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||| ||| |||||||||||||||||||||||||| | |||||||||    
T  29919938 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctactcggatttttatcttcttaataatttggacccaattatttc 29919839  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  29919838 attgcaaataa 29919828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 37690792 - 37690901
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   |||||| |||||| |||||||||||||||||||||||||| | |||||||||    
T  37690792 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattgactgctcggatttttatcttcttaataatttggacccaattatttc 37690891  T
Q  215 attgcaaata 224  Q
    ||||||||||    
T  37690892 attgcaaata 37690901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 48407793 - 48407667
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttg------gacnnnnnnnntcaagtttttcactctcttaatcatattattagctttgtattaacattt 365  Q
    ||||||||||||||||||||||||||||||||||      ||         ||||||||||||||||||||||| |||||||| |||||||||| | |||    
T  48407793 tctctataaatagagacttgaatcatttgatttgaacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattaactttgtattagctttt 48407694  T
Q  366 cttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||| ||||||||||    
T  48407693 cttttgaagttttagtctttatttagt 48407667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 14097265 - 14097155
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| |||| |||||||||||   |   ||||||| ||||| |||||||||||||||||||||||||| | |||||||||    
T  14097265 caattcaacatgttgaatgcctggcccacagagacacttggcgcgcgctgattggttgctcggatttttatcttcttaataatttggacccaattatttc 14097166  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  14097165 attgcaaataa 14097155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 47297125 - 47297203
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  47297125 gacacttggcatgttttgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 47297203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 10265683 - 10265805
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||  ||||||||||||||||| ||||||||||||| ||||| | |||||    
T  10265683 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaaattttcactctcttaatcttattattagctttctattagcttttct 10265782  T
Q  368 tttgaagttttagtgtttattta 390  Q
    |||||||||||||| ||||||||    
T  10265783 tttgaagttttagtctttattta 10265805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 17675994 - 17676117
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnnt---caagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||| ||||||||||||||||            ||| |||||||||||||||||| |||||||||||||  |||| | ||||||    
T  17675994 tctctataaatagagacttggatcatttgatttggacacaaaaaaaaaccaaatttttcactctcttaatcttattattagctttccattagcttttctt 17676093  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| ||||||||||    
T  17676094 ttgaagttttagtctttatttagt 17676117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 19578471 - 19578525
Alignment:
Q  171 tgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19578471 tgctcagatttttatcttcttaataatttggacccaattatttcattgcaaataa 19578525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 31159951 - 31159891
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||    
T  31159951 tgattggctgcttggatttttatcttcttaataatttggacccaattatttcattgcaaat 31159891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 48384720 - 48384782
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  48384720 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 48384782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 37823127 - 37823066
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||| ||||| |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  37823127 gattgactgcttagatttttatcttcttaataatttggactcaattatttcattgcaaataa 37823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 43739452 - 43739367
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac----nnnnnnnntcaagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| |||||||||||||    
T  43739452 tctctataaatagagacttgaatcatttgatttggacacaggaaaaaaatcaagtttttcactctcttaatcttattattagcttt 43739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 17675848 - 17675903
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttgga 202  Q
    ||||||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  17675848 gacacttggcatgttttgattggctgcttgaatttttatcttcttaataatttgga 17675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 29524423 - 29524362
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| |  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  29524423 gattggctggttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 29524362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 45455453 - 45455514
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||| ||||||||||||||||||   ||||||||||||||||||||    
T  45455453 gattggctgcttggatttttttcttcttaataatttggactcaattatttcattgcaaataa 45455514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 8471637 - 8471598
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8471637 ctctctctataaatagagacttggatcatttgatttggac 8471598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 33167635 - 33167600
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||||||||||||||||||    
T  33167635 ctctataaatagagacttgaatcatttgatttggac 33167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 41542680 - 41542605
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||| |||||||   ||||||| |||| ||||| | ||||||||||||||||||| ||| ||||||    
T  41542680 tcaagtttttcactatcttaatatcattattatctttctattagcttttcttttgaagttttagtttttttttagt 41542605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 10265515 - 10265581
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| |||||||||||  |||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  10265515 gtttcgattggctgcttggatttttatcatcttaatattttggactcaattatttcattgcaaataa 10265581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 33167737 - 33167676
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| |  ||||||||||||||||||||||| ||   ||||||||||||||||||||    
T  33167737 gattggctggttggatttttatcttcttaataatttagacttaattatttcattgcaaataa 33167676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 51493850 - 51493908
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  51493850 accatttacaatggcatgttgaatttgcca--------ttcaacatgttgaacccttgttgaaccat 51493908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 643501 - 643537
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  643501 tctctataaatagagacttggatcatttgatttggac 643537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 2474680 - 2474728
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  2474680 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 2474728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 2474773 - 2474809
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2474773 tctctataaatagagacttggatcatttgatttggac 2474809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 14097354 - 14097322
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||||||||||||||||    
T  14097354 gccattcaacatgttgaacccttgttgaaccat 14097322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 19578561 - 19578597
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19578561 tctctataaatagagacttggatcatttgatttggac 19578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 51156334 - 51156370
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  51156334 tctctataaatagagacttggatcatttgatttggac 51156370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 45242472 - 45242437
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45242472 ctctataaatagagacttggatcatttgatttggac 45242437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 36231448 - 36231382
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| |||||||||||  |||||||||| |||||||| |||| |   ||||||||||||||||||||    
T  36231448 gtttcgattggctgcttggatttttatcatcttaatattttgaactcaattatttcattgcaaataa 36231382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 36303467 - 36303405
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    |||||||||||||| |||||||| |||||||| | || |||||   |||||||||||||||||    
T  36303467 tcaagtttttcactatcttaatcttattattatccttctattagtttttcttttgaagtttta 36303405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 47297242 - 47297276
Alignment:
Q  274 tctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||||||| ||||||||    
T  47297242 tctataaatagagacttgaatcatttcatttggac 47297276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 51156258 - 51156300
Alignment:
Q  181 tttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||   ||||||||||||||||||    
T  51156258 tttatcttcttaataatttggactcaattatttcattgcaaat 51156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 8471557 - 8471520
Alignment:
Q  355 tattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  8471557 tattagcatttcttttgaagttttagtctttatttagt 8471520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 29920055 - 29920022
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattca 81  Q
    |||||||||||||||| |||||||||||||||||    
T  29920055 accatttacaatggcatgttgaatttgccattca 29920022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 30878163 - 30878236
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgca 220  Q
    ||||||||  |||||  |||||||||||  | ||||||||||||||||||||||||   ||||||||| |||||    
T  30878163 gacacttgacatgttacgattggctgcttgggtttttatcttcttaataatttggactcaattatttcgttgca 30878236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 33167560 - 33167523
Alignment:
Q  355 tattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  33167560 tattaacatttcttttgaagttttagtctttgtttagt 33167523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 37690675 - 37690729
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaa 110  Q
    |||||||||||||||| |||||||||||||        |||||||||||||||||||||||||    
T  37690675 accatttacaatggcatgttgaatttgcca--------ttcaacatgttgaacccttgttgaa 37690729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 43739555 - 43739490
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||| |||||||||||   ||||||||| |||||||| ||||||   |||||||||||||||||||    
T  43739555 gtttcgattggctgcttgaatttttatcatcttaatattttggactcaattatttcattgcaaata 43739490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 8464988 - 8464952
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  8464988 tctctataaatagagacttggttcatttgatttggac 8464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 17675913 - 17675953
Alignment:
Q  185 tcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  17675913 tcttcttaataatttggactcaattatttcattgcaaataa 17675953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 27629991 - 27630027
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  27629991 tctctataaatagagacttggttcatttgatttggac 27630027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 29524325 - 29524289
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  29524325 tctctacaaatagagacttggatcatttgatttggac 29524289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 29920029 - 29919997
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||| ||||||||||||    
T  29920029 gccattcaacatgttgaaccattgttgaaccat 29919997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 31471609 - 31471573
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  31471609 tctctataaatagagacttggttcatttgatttggac 31471573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 36231341 - 36231309
Alignment:
Q  276 tataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||| ||||||||||||||||    
T  36231341 tataaatagagacttggatcatttgatttggac 36231309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 37419875 - 37419911
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  37419875 tctctataaatagagacttggttcatttgatttggac 37419911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 37646088 - 37646124
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  37646088 tctctataaatagagacttggttcatttgatttggac 37646124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 37823023 - 37822987
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  37823023 tctctacaaatagagacttggatcatttgatttggac 37822987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 44450916 - 44450952
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  44450916 tctctataaatagagacttggttcatttgatttggac 44450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 44651496 - 44651460
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  44651496 tctctataaatagagacttggttcatttgatttggac 44651460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 45363902 - 45363866
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  45363902 tctctacaaatagagacttggatcatttgatttggac 45363866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 45364017 - 45363941
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||| |||| ||||  ||||| |||||  |||||||||||||||||||||||| |   ||||||||||| ||||||    
T  45364017 gacacgtggtttgttacgattgactgcttggatttttatcttcttaataatttgaactcaattatttcatagcaaat 45363941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 45622934 - 45622966
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    ||||||||| |||||||||||||||||||||||    
T  45622934 gccattcaagatgttgaacccttgttgaaccat 45622966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 350 - 226
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  350 tctctataaatagagacttggatcatttgatttggacaaagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattaacttttct 251  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||| ||||||||||    
T  250 tttgaagttttagtctttatttagt 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 463 - 385
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||||||   ||||||||||||||||| |||||||   ||||||||||||||||||||    
T  463 gacacttggcatgttttgattggctgcttgaatttttatcttcttaattatttggactcaattatttcattgcaaataa 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 982 - 1041
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||   |||||||||||||||||||||| ||   ||||||||||||||||||    
T  982 gattggctgcttgaatttttatcttcttaataattttgactcaattatttcattgcaaat 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 1084 - 1120
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  1084 tctctacaaatagagacttggatcatttgatttggac 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 42860347 - 42860220
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatt 364  Q
    |||||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  42860347 tctctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctt 42860248  T
Q  365 tcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||||||    
T  42860247 tcttttgaagttttagtgtttatttagt 42860220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 15057007 - 15056880
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatt 364  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  15057007 ctctctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcttt 15056908  T
Q  365 tcttttgaagttttagtgtttatttagt 392  Q
    |||||| |||||||||| ||||||||||    
T  15056907 tcttttaaagttttagtctttatttagt 15056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 35932278 - 35932154
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    ||||||||||||||||||| |||||||||||||||||            | ||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  35932278 tctctataaatagagacttaaatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagctttgtattagcctttct 35932179  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  35932178 tttgaagttttagtgtttatttagt 35932154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 45100519 - 45100629
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttc 214  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  45100519 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcggatttttatcttcttaataatttggacccaattatttc 45100618  T
Q  215 attgcaaataa 225  Q
    |||||||||||    
T  45100619 attgcaaataa 45100629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 45100673 - 45100798
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||| ||||||||||||||||             ||||||||||||||||||||||| |||||||||||||||||||   ||||    
T  45100673 tctctataaatagagacttggatcatttgatttggacacaggaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtctttc 45100772  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||| ||||||||||||||||||||||    
T  45100773 tttggaagttttagtgtttatttagt 45100798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 15057126 - 15057048
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  15057126 gacacttggcatgttttgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 15057048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 42860496 - 42860384
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagattttt--atcttcttaataatttggatcgaattatt 212  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   |||||||||||||  ||||||  ||||||||||||||||||| | |||||||    
T  42860496 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgaatttttttatcttcttaataatttggacccaattatt 42860397  T
Q  213 tcattgcaaataa 225  Q
    |||||||||||||    
T  42860396 tcattgcaaataa 42860384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 12272110 - 12272234
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnnt----caagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||             |||||||||||||||||||||  |||||||| |||| ||||| | |||||    
T  12272110 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttct 12272209  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    ||| |||||||||| ||||||||||    
T  12272210 tttaaagttttagtctttatttagt 12272234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 13783737 - 13783799
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||| |  |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  13783737 tgattggctggttggatttttatcttcttaataatttggattaaattatttcattgcaaataa 13783799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 44503791 - 44503730
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  44503791 gattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 44503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 44150409 - 44150349
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  44150409 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 44150349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 41477568 - 41477507
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    ||||||||| ||| |||||||| |||||||| |||| ||||||| |||||||||||||||||    
T  41477568 caagttttttactatcttaatcttattattatctttctattaacttttcttttgaagtttta 41477507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 29732209 - 29732149
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||| |  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  29732209 tgattggctgtttggatttttatcttcttaataatttggactcaattatttcattgcaaat 29732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 38204832 - 38204880
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  38204832 gatttttatcttcttaataatttggactcaattatttcattgcaaataa 38204880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 35101820 - 35101781
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  35101820 ctctctctataaatagagacttgattcatttgatttggac 35101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 40284176 - 40284069
Alignment:
Q  118 ttcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcatt 217  Q
    |||||||||||||| || ||| || | | ||||| |||  ||||  |||||||||||  ||||||||| ||||||||||||||||   |||||||||||     
T  40284176 ttcaacatgttgaaagtctggcccgcagtgacacgtggcttgttacgattggctgcttggatttttattttcttaataatttggactcaattatttcata 40284077  T
Q  218 gcaaataa 225  Q
    ||||||||    
T  40284076 gcaaataa 40284069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 1632978 - 1633024
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  1632978 gatttttatcttcttaataatttggactcaattatttcattgcaaat 1633024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 45100402 - 45100461
Alignment:
Q  48 accatttacaatggcacgttgaatttgccattcagccattcaacatgttgaacccttgttgaaccatc 115  Q
    |||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||||||    
T  45100402 accatttacaatggcatgttgaatttgcca--------ttcaacatgttgaacccttgttgaaccatc 45100461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 26245153 - 26245092
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  26245153 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 26245092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 31129003 - 31129060
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaa 221  Q
    |||||||||||  |||||||||| |||||||||||||||   ||||||||||||||||    
T  31129003 gattggctgcttggatttttatcatcttaataatttggactcaattatttcattgcaa 31129060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 1954811 - 1954859
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  1954811 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 1954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 7511416 - 7511448
Alignment:
Q  276 tataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||||||||||||||    
T  7511416 tataaatagagacttgaatcatttgatttggac 7511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 13817472 - 13817436
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  13817472 tctctataaatagagacttggatcatttgatttggac 13817436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 31129101 - 31129137
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31129101 tctctataaatagagacttggatcatttgatttggac 31129137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 42860578 - 42860546
Alignment:
Q  82 gccattcaacatgttgaacccttgttgaaccat 114  Q
    |||||||||||||||||||||||||||||||||    
T  42860578 gccattcaacatgttgaacccttgttgaaccat 42860546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 23550162 - 23550127
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23550162 ctctacaaatagagacttgaatcatttgatttggac 23550127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 23550269 - 23550210
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||   |||||||||||||||||||||| ||   ||||||||||||||||||    
T  23550269 gattggctgcttgaatttttatcttcttaataatttagactcaattatttcattgcaaat 23550210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 35932369 - 35932322
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||||||||| ||||||   ||||||||||||||||||||    
T  35932369 atttttatcttcttaatactttggactcaattatttcattgcaaataa 35932322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 42861117 - 42861082
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42861117 ctctataaatagagacttggatcatttgatttggac 42861082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 13497796 - 13497730
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| |||||||||||  |||||||||| |||||||| | ||||   ||||||||||||||||||||    
T  13497796 gtttcgattggctgcttggatttttatcatcttaatattctggactcaattatttcattgcaaataa 13497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 30529216 - 30529262
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||    
T  30529216 atttttatcttctaaataatttggactcaattatttcattgcaaata 30529262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 43523828 - 43523874
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||| ||||||||||||||||   ||||||||||||||||||    
T  43523828 gatttttattttcttaataatttggactcaattatttcattgcaaat 43523874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 7511302 - 7511367
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||| |||||||| ||  |||||||||| |||||||| ||||||   |||||||||||||||||||    
T  7511302 gtttcgattggctacttggatttttatcatcttaatattttggactcaattatttcattgcaaata 7511367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 13947959 - 13947898
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||| ||  ||||||||||||||||||||||||||   |||||||||||  |||||||    
T  13947959 gattggctacttggatttttatcttcttaataatttggactcaattatttcataacaaataa 13947898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17494306 - 17494366
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    ||||||||||||| |||||||| |||||||| | || ||||| | |||||||||||||||||    
T  17494306 caagtttttcactatcttaatcttattattatccttctattagc-tttcttttgaagtttta 17494366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 1633068 - 1633104
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  1633068 tctctataaatagagactttgatcatttgatttggac 1633104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 5214214 - 5214182
Alignment:
Q  276 tataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||| ||||||||||||||||    
T  5214214 tataaatagagacttggatcatttgatttggac 5214182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 5736443 - 5736407
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  5736443 tctctataaatagagacttggttcatttgatttggac 5736407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 8449685 - 8449721
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  8449685 tctctataaatagagacttggttcatttgatttggac 8449721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 13783837 - 13783873
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  13783837 tctctacaaatagagacttggatcatttgatttggac 13783873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 18028995 - 18029031
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  18028995 tctctataaatagagacttggttcatttgatttggac 18029031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 26631804 - 26631840
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  26631804 tctctataaatagagacttggttcatttgatttggac 26631840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 26748610 - 26748646
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  26748610 tctctataaatagagacttggttcatttgatttggac 26748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 30470470 - 30470506
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  30470470 tctctataaatagagacttggttcatttgatttggac 30470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 34954984 - 34955020
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  34954984 tctctataaatagagacttggttcatttgatttggac 34955020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 28317732 - 28317856
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  28317732 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttct 28317831  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  28317832 tttgaagttttagtgtttatttagt 28317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 30720540 - 30720417
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn---tcaagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||  ||||||||||||||||           ||||||||||||| ||||||||| ||||||||||||||||||| | ||||||    
T  30720540 tctctataaatagagacttagatcatttgatttggacacagaaaaaaatcaagtttttcacactcttaatcttattattagctttgtattagcctttctt 30720441  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||||    
T  30720440 ttgaagttttagtgtttatttagt 30720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 392
Target Start/End: Original strand, 40300582 - 40300708
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacattt 365  Q
    |||||||||||||||||||||| ||||||||||||||||            |||||||||||| |||||||||| ||||||||||||||||||| | |||    
T  40300582 tctctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcattctcttaatcttattattagctttgtattagctttt 40300681  T
Q  366 cttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||| ||||||||||    
T  40300682 cttttgaagttttagtatttatttagt 40300708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 22660255 - 22660180
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  22660255 tcaagtttttcactctcttaatcttattattagctttgtattagcttttcttttgaagttttagtatttatttagt 22660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 42881976 - 42881901
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  42881976 tcaagtttttcactctcttaatcttatcattagctttgtattagcctttcttttgaagttttagtgtttatttagt 42881901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 47159060 - 47159181
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn-----tcaagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    ||||||||||||||||||||||||||||||| |||||             ||||||||||||||||||||||| ||| ||||||||||||||| | ||||    
T  47159060 tctctataaatagagacttgaatcatttgatgtggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttc 47159159  T
Q  367 ttttgaagttttagtgtttatt 388  Q
    ||||||||||||||||||||||    
T  47159160 ttttgaagttttagtgtttatt 47159181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 390
Target Start/End: Complemental strand, 30566993 - 30566921
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttattta 390  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  30566993 caagtttttaactctcttaatcttattattagctttctattaacttttcttttgaagttttagtctttattta 30566921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 30720694 - 30720582
Alignment:
Q  115 caattcaacatgttgaatgtatggtccacggagacacttggtatgttttgattggctgctcagattttt--atcttcttaataatttggatcgaattatt 212  Q
    |||||||||||||||||||  ||| ||||||||||||||||   |   |||||||||||||  ||||||  ||||||||||||||||||| | |||||||    
T  30720694 caattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgaatttttttatcttcttaataatttggacccaattatt 30720595  T
Q  213 tcattgcaaataa 225  Q
    |||||||||||||    
T  30720594 tcattgcaaataa 30720582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 33078506 - 33078580
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||||||||| |||||||||| ||||||||||||| |||||   ||||||||||||||||||| ||||||||||    
T  33078506 caagtttttcattctcttaatcttattattagctttctattagtttttcttttgaagttttagtctttatttagt 33078580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 33508139 - 33508217
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||  ||||||||||||||||||  ||||||||| ||||||||||||||||   ||||||||||||||||||||    
T  33508139 gacacttgacatgttttgattggctgcttggatttttattttcttaataatttggactcaattatttcattgcaaataa 33508217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 33508253 - 33508375
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn---tcaagtttttcactctcttaatcatattattagctttgtattaacatttctt 368  Q
    |||||||||||||||||||| ||||||||||||||||           |||||||||||||| ||| |||| |||||||| ||||  |||||| ||||||    
T  33508253 tctctataaatagagacttggatcatttgatttggacacagaaaaaaatcaagtttttcactttct-aatcttattattaactttccattaacttttctt 33508351  T
Q  369 ttgaagttttagtgtttatttagt 392  Q
    ||||||||||||| ||||||||||    
T  33508352 ttgaagttttagtctttatttagt 33508375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 22660405 - 22660328
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||| ||||||||||||  ||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  22660405 gacacttggcatgttttgattga-tgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 22660328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 42882118 - 42882056
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  42882118 tgattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaataa 42882056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 47158957 - 47159019
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  47158957 tgattggctgcttggatttttattttcttaataatttggacccaattatttcattgcaaataa 47159019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 28317626 - 28317688
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||  ||||||||||||||||||||||||||   |||||||| |||||||||||    
T  28317626 tgattggctgcttggatttttatcttcttaataatttggactcaattattttattgcaaataa 28317688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 35192805 - 35192866
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    ||||||||||||| |||||||| |||||||| |||| || |||| |||||||||||||||||    
T  35192805 caagtttttcactatcttaatcttattattatctttctagtaacctttcttttgaagtttta 35192866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 39770246 - 39770185
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  39770246 gattggctgcttggatttttatcttcttaataatttggactcaattatttcatagcaaataa 39770185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 37952197 - 37952161
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||||||||||||||||||    
T  37952197 tctctataaatagagacttgaatcatttgatttggac 37952161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 40300168 - 40300220
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataattt 199  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||||||||||||    
T  40300168 gacacttgacatgttttgattgactgcttagatttttatcttcttaataattt 40300220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 37952289 - 37952242
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||    
T  37952289 gatttttatcttcttaataatttggactcaattatttcattgcaaata 37952242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 38352135 - 38352076
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||   |||||||||||||||||||||||||   ||||||||||||||||||    
T  38352135 gattggctgcttgaatttttatcttcttaataatttggactcaattatttcattgcaaat 38352076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 115220 - 115142
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||| | |||||  |||||||||||  |||||||||| |||||||| ||||||   ||||||||||||||||||||    
T  115220 gacacttagcatgttacgattggctgcttcgatttttatcatcttaatattttggactcaattatttcattgcaaataa 115142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 26815636 - 26815590
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  26815636 gatttttatcttcttaataatttggactcaattatttcattgcaaat 26815590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 32749455 - 32749409
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  32749455 gatttttatcttcttaataatttggactcaattatttcattgcaaat 32749409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 40690841 - 40690795
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  40690841 gatttttatcttcttaataatttggactcaattatttcattgcaaat 40690795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 20354764 - 20354719
Alignment:
Q  178 atttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||||||||||||||||   ||||||||||||||||||    
T  20354764 atttttatcttcttaataatttggactcaattatttcattgcaaat 20354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 43201480 - 43201545
Alignment:
Q  160 ttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||||||  ||||||| || ||||||||||||| |   ||||||||||||||||||||    
T  43201480 ttttgattggctgcttggatttttctcatcttaataatttgaactcaattatttcattgcaaataa 43201545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 45548938 - 45548999
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  45548938 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 45548999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 115046 - 115010
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagcttt 353  Q
    ||||||||||||||||||||||| |||||||||||||    
T  115046 tcaagtttttcactctcttaatcttattattagcttt 115010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 26815545 - 26815509
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26815545 tctctataaatagagacttggatcatttgatttggac 26815509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 30630286 - 30630322
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30630286 tctctataaatagagacttggatcatttgatttggac 30630322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 36522013 - 36521965
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  36522013 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 36521965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 38970471 - 38970435
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38970471 tctctataaatagagacttggatcatttgatttggac 38970435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 48985304 - 48985268
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  48985304 tctctataaatagagacttggatcatttgatttggac 48985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 38970419 - 38970384
Alignment:
Q  318 caagtttttcactctcttaatcatattattagcttt 353  Q
    |||||||||||||||||||||| |||||||||||||    
T  38970419 caagtttttcactctcttaatcttattattagcttt 38970384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 38970572 - 38970506
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||| ||||||||| | | ||||||||| ||||||||||||| |   ||||||||||||||||||||    
T  38970572 gtttcgattggctgtttatatttttatcatcttaataatttgaactaaattatttcattgcaaataa 38970506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 39770152 - 39770114
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  39770152 tctctctataaatagagacttagatcatttgatttggac 39770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 37952121 - 37952084
Alignment:
Q  355 tattaacatttcttttgaagttttagtgtttatttagt 392  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  37952121 tattagcatttcttttgaagttttagtctttatttagt 37952084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 5813699 - 5813663
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  5813699 tctctataaatagagacttggttcatttgatttggac 5813663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 32126902 - 32126938
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  32126902 tctctacaaatagagacttggatcatttgatttggac 32126938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 32749373 - 32749337
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| | ||||||||||||||    
T  32749373 tctctataaatagagacttggaacatttgatttggac 32749337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 33078455 - 33078491
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  33078455 tctctataaatagagactttgatcatttgatttggac 33078491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 33379706 - 33379670
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  33379706 tctctataaatagagacttggttcatttgatttggac 33379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 35028471 - 35028507
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  35028471 tctctataaatagagacttggttcatttgatttggac 35028507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 36521914 - 36521882
Alignment:
Q  276 tataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||| ||||||||||||||||    
T  36521914 tataaatagagacttggatcatttgatttggac 36521882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 37888801 - 37888765
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  37888801 tctctataaatagagacttggttcatttgatttggac 37888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 38352035 - 38352003
Alignment:
Q  272 tctctataaatagagacttgaatcatttgattt 304  Q
    |||||| ||||||||||||||||||||||||||    
T  38352035 tctctacaaatagagacttgaatcatttgattt 38352003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 40690667 - 40690631
Alignment:
Q  356 attaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  40690667 attagcatttcttttgaagttttagtctttatttagt 40690631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 10886661 - 10886537
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnn----tcaagtttttcactctcttaatcatattattagctttgtattaacatttct 367  Q
    |||||||||||||||||||| ||||||||||||||||            | ||||||||||||||||||||| ||||||||| |||| |||| | |||||    
T  10886661 tctctataaatagagacttggatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagttttgcattagcctttct 10886562  T
Q  368 tttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||||||    
T  10886561 tttgaagttttagtgtttatttagt 10886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 30446636 - 30446563
Alignment:
Q  317 tcaagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttattta 390  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  30446636 tcaagtttttcactctcttaatcttattattagctatctattaacttttcttttgaagttttagtctttattta 30446563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 10886776 - 10886697
Alignment:
Q  146 agacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||| ||| ||||||||||||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  10886776 agacacatggcatgttttgattggctgcttggattgttatcttcttaataatttggacccaattatttcattgcaaataa 10886697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 12502332 - 12502207
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggacnnnnnnnnt-----caagtttttcactctcttaatcatattattagctttgtattaacatttc 366  Q
    |||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||| |||||||| ||||  |||| | ||||    
T  12502332 tctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatcttattattaactttccattagcttttc 12502233  T
Q  367 ttttgaagttttagtgtttatttagt 392  Q
    ||||||||||||||| ||||||||||    
T  12502232 ttttgaagttttagtctttatttagt 12502207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 24349004 - 24348944
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||    
T  24349004 gattggctgcttggatttttatcttcttaataatttggattcaattatttcattgcaaata 24348944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 8222484 - 8222422
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttag 380  Q
    |||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||||||||||    
T  8222484 caagtttttcactctcttaatcttattattaactttctattagcttttcttttgaagttttag 8222422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 12513398 - 12513324
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagttttagtgtttatttagt 392  Q
    |||||||||||||||||||||| |||||||| ||||  |||| | ||| ||||||||||||||| ||||||||||    
T  12513398 caagtttttcactctcttaatcttattattaactttccattagcttttattttgaagttttagtctttatttagt 12513324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 34242940 - 34242864
Alignment:
Q  147 gacacttggtatgttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||| ||| |||||  ||||| |||||  |||||||||||||||||||||||||| | |||||||||||||||||||    
T  34242940 gacacgtggcatgttacgattgactgcttggatttttatcttcttaataatttgga-ctaattatttcattgcaaata 34242864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 8675224 - 8675163
Alignment:
Q  163 tgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    ||||||||||   ||||||||||||| |||||||||||||   |||||||||||||||||||    
T  8675224 tgattggctggctagatttttatctttttaataatttggactcaattatttcattgcaaata 8675163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 26653702 - 26653763
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  26653702 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 26653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 26759670 - 26759731
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||||||  ||||||||| ||||||||||||||||   ||||||||||| ||||||||    
T  26759670 gattggctgcttggatttttattttcttaataatttggactcaattatttcatagcaaataa 26759731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 8668857 - 8668821
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  8668857 tctctataaatagagacttggatcatttgatttggac 8668821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 8668949 - 8668901
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  8668949 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 8668901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 34841898 - 34841862
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| ||||||||||||||||    
T  34841898 tctctataaatagagacttggatcatttgatttggac 34841862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 34841992 - 34841944
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  34841992 gatttttatcttcttaatactttggactcaattatttcattgcaaataa 34841944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 635102 - 635067
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  635102 ctctataaatagagacttggatcatttgatttggac 635067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 6377131 - 6377166
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6377131 ctctataaatagagacttggatcatttgatttggac 6377166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 17957999 - 17958034
Alignment:
Q  273 ctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17957999 ctctataaatagagacttggatcatttgatttggac 17958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 32360171 - 32360133
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  32360171 tctctttataaatagagacttgattcatttgatttggac 32360133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 12502433 - 12502372
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||| ||||  ||||||| | ||||||||||||||||   ||||||||||||||||||||    
T  12502433 gattggttgcttggatttttttattcttaataatttggactcaattatttcattgcaaataa 12502372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 24115407 - 24115358
Alignment:
Q  332 tcttaatcatattattagctttgtattaacatttcttttgaagttttagt 381  Q
    |||||||| ||||||||||||| ||||| | ||||||||||| |||||||    
T  24115407 tcttaatcttattattagctttctattagcttttcttttgaacttttagt 24115358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 30446789 - 30446724
Alignment:
Q  159 gttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaata 224  Q
    |||| |||||||||||   ||||||||| |||||||| ||||||   |||||||||||||||||||    
T  30446789 gtttcgattggctgcttgaatttttatcatcttaatattttggactcaattatttcattgcaaata 30446724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 198248 - 198212
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  198248 tctctataaatagagacttggttcatttgatttggac 198212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 2503766 - 2503730
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  2503766 tctctataaatagagacttggttcatttgatttggac 2503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 8222536 - 8222500
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  8222536 tctctataaatagatacttggatcatttgatttggac 8222500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 12513448 - 12513412
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  12513448 tctctataaatagagactttgatcatttgatttggac 12513412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 12513542 - 12513482
Alignment:
Q  165 attggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    ||||||||||  ||||||| ||||||||||| ||| ||   ||||||||||||||||||||    
T  12513542 attggctgcttggatttttttcttcttaatattttagactcaattatttcattgcaaataa 12513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 24348899 - 24348863
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  24348899 tctctacaaatagagacttggatcatttgatttggac 24348863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 29951724 - 29951760
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||  ||||||||||||||||    
T  29951724 tctctataaatagagacttagatcatttgatttggac 29951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 30446688 - 30446652
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||| |||||||||||| |||    
T  30446688 tctctataaatagagacttggatcatttgattttgac 30446652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 34328821 - 34328785
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  34328821 tctctataaatagagacttggttcatttgatttggac 34328785  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 109773 - 109832
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||    
T  109773 gattggctgcttggatttttatcttcttaataatttggactcaattatttcattgcaaat 109832  T

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Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 109865 - 109903
Alignment:
Q  270 tctctctataaatagagacttgaatcatttgatttggac 308  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  109865 tctctctataaatagagacttggatcatttgatttggac 109903  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 124410 - 124349
Alignment:
Q  318 caagtttttcactctcttaatcatattattagctttgtattaacatttcttttgaagtttta 379  Q
    ||||||||| ||| |||||||| |||||||| |||| ||||||| |||||||||||||||||    
T  124410 caagttttttactatcttaatcttattattatctttctattaacttttcttttgaagtttta 124349  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 106361 - 106298
Alignment:
Q  160 ttttgattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    |||||||||||||    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  106361 ttttgattggctggctggatttttatcttcttaataatttggactcaattatttcattgcaaat 106298  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 106258 - 106222
Alignment:
Q  269 ctctctctataaatagagacttgaatcatttgatttg 305  Q
    ||||||||||||||||||||||| |||||||||||||    
T  106258 ctctctctataaatagagacttggatcatttgatttg 106222  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 83476 - 83522
Alignment:
Q  177 gatttttatcttcttaataatttggatcgaattatttcattgcaaat 223  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||    
T  83476 gatttttatcttcttaataatttggactcaattatttcattgcaaat 83522  T

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Target: scaffold1183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 172 - 111
Alignment:
Q  164 gattggctgctcagatttttatcttcttaataatttggatcgaattatttcattgcaaataa 225  Q
    |||||||| ||  |||||||||| |||||||||||| ||   ||||||||||||||||||||    
T  172 gattggcttcttggatttttatcatcttaataattttgactcaattatttcattgcaaataa 111  T

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Target: scaffold0758 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 6369 - 6405
Alignment:
Q  272 tctctataaatagagacttgaatcatttgatttggac 308  Q
    ||||||||||||||||||||  |||||||||||||||    
T  6369 tctctataaatagagacttggttcatttgatttggac 6405  T

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