View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3737_high_8 (Length: 256)
Name: NF3737_high_8
Description: NF3737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3737_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 8566051 - 8566278
Alignment:
| Q |
19 |
acatggaaccatcactacatttttcacagatcataactcacaccctcagttcctagaaatagtgaataccatgacaattttgagagaggaaatgaacaaa |
118 |
Q |
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| T |
8566051 |
acatggaaccatcactacatttttcacagatcataactcacaccctcagttcctagaaatagtgaataccatgacaattttgagagaggaaatgaacaaa |
8566150 |
T |
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| Q |
119 |
atggaggaagtggaccttaactttgaaagcaaccacacccattattataacatatgttgaaaggttattatgaaacatatttataaatcgatcatttaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8566151 |
atggaggaagtggaccttaactttgaaagcaaccacacccattattataacatatgttgaaaggttattatgaaacatatttataaatcgataatttaag |
8566250 |
T |
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| Q |
219 |
ttcaattcttcttgatgtttagcctatg |
246 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
8566251 |
ttcaattcttcttgatgtttagcctatg |
8566278 |
T |
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