View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3739_low_22 (Length: 315)

Name: NF3739_low_22
Description: NF3739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3739_low_22
NF3739_low_22
[»] chr7 (27 HSPs)
chr7 (1-167)||(35374436-35374598)
chr7 (202-301)||(35374306-35374401)
chr7 (132-164)||(47303333-47303365)
chr7 (133-164)||(31716719-31716750)
chr7 (133-164)||(43469615-43469646)
chr7 (134-164)||(2688125-2688155)
chr7 (133-167)||(18766481-18766515)
chr7 (134-164)||(24518490-24518520)
chr7 (134-164)||(30903650-30903680)
chr7 (135-165)||(42264757-42264787)
chr7 (134-164)||(43301481-43301511)
chr7 (134-164)||(48614229-48614259)
chr7 (135-164)||(3143438-3143467)
chr7 (135-164)||(3232414-3232443)
chr7 (135-164)||(26253639-26253668)
chr7 (135-164)||(29189639-29189668)
chr7 (133-166)||(32860217-32860250)
chr7 (134-163)||(41936981-41937010)
chr7 (135-164)||(45020970-45020999)
chr7 (134-163)||(47579660-47579689)
chr7 (132-164)||(1023708-1023740)
chr7 (132-164)||(1730363-1730395)
chr7 (135-163)||(1975880-1975908)
chr7 (132-164)||(2963456-2963488)
chr7 (132-164)||(22867314-22867346)
chr7 (133-165)||(29655531-29655563)
chr7 (135-163)||(42670971-42670999)
[»] chr2 (10 HSPs)
chr2 (134-167)||(2629864-2629897)
chr2 (134-166)||(1997428-1997460)
chr2 (133-164)||(21010714-21010745)
chr2 (132-166)||(23388815-23388849)
chr2 (133-166)||(18078705-18078738)
chr2 (127-164)||(33809850-33809887)
chr2 (134-166)||(27990525-27990557)
chr2 (134-166)||(28077058-28077090)
chr2 (135-163)||(41438302-41438330)
chr2 (134-166)||(45133756-45133788)
[»] chr8 (19 HSPs)
chr8 (133-164)||(11170180-11170211)
chr8 (132-163)||(19294675-19294706)
chr8 (134-165)||(29197729-29197760)
chr8 (133-164)||(35778681-35778712)
chr8 (133-164)||(36102135-36102166)
chr8 (134-164)||(5728683-5728713)
chr8 (134-164)||(14395775-14395805)
chr8 (134-164)||(33292776-33292806)
chr8 (135-164)||(16037236-16037265)
chr8 (135-164)||(19295134-19295163)
chr8 (135-164)||(27343737-27343766)
chr8 (133-166)||(38798386-38798419)
chr8 (132-165)||(40668428-40668461)
chr8 (135-163)||(4418664-4418692)
chr8 (132-164)||(33575448-33575480)
chr8 (132-164)||(38389896-38389928)
chr8 (132-164)||(42148441-42148473)
chr8 (132-164)||(42148906-42148938)
chr8 (132-164)||(42641384-42641416)
[»] chr6 (11 HSPs)
chr6 (133-164)||(17544871-17544902)
chr6 (133-164)||(17545340-17545371)
chr6 (133-164)||(33599899-33599930)
chr6 (133-167)||(18153711-18153745)
chr6 (135-165)||(25022432-25022462)
chr6 (127-164)||(1092426-1092463)
chr6 (135-164)||(7683953-7683982)
chr6 (135-164)||(8149570-8149599)
chr6 (132-164)||(7575678-7575710)
chr6 (132-164)||(19152771-19152803)
chr6 (132-164)||(19680913-19680945)
[»] chr5 (21 HSPs)
chr5 (133-164)||(7411500-7411531)
chr5 (133-164)||(28767625-28767656)
chr5 (133-164)||(33686459-33686490)
chr5 (133-164)||(43390495-43390526)
chr5 (134-164)||(6516320-6516350)
chr5 (133-167)||(14322627-14322661)
chr5 (134-164)||(19103898-19103928)
chr5 (134-164)||(42661347-42661377)
chr5 (135-164)||(4591304-4591333)
chr5 (135-164)||(7002175-7002204)
chr5 (135-164)||(11374973-11375002)
chr5 (135-164)||(26019843-26019872)
chr5 (135-164)||(28767209-28767238)
chr5 (133-166)||(32400948-32400981)
chr5 (135-164)||(34728513-34728542)
chr5 (134-167)||(39728944-39728977)
chr5 (134-166)||(4822284-4822316)
chr5 (134-166)||(7468860-7468892)
chr5 (132-164)||(8647211-8647243)
chr5 (134-166)||(26240962-26240994)
chr5 (132-164)||(36976674-36976706)
[»] chr4 (21 HSPs)
chr4 (133-164)||(35119920-35119951)
chr4 (132-163)||(54788635-54788666)
chr4 (134-164)||(5497121-5497151)
chr4 (134-164)||(34373584-34373614)
chr4 (130-164)||(52021209-52021243)
chr4 (135-164)||(12698877-12698906)
chr4 (133-166)||(14479301-14479334)
chr4 (135-164)||(19037391-19037420)
chr4 (135-164)||(23454351-23454380)
chr4 (135-164)||(26649732-26649761)
chr4 (135-164)||(29771543-29771572)
chr4 (135-164)||(54789094-54789123)
chr4 (133-165)||(25108331-25108363)
chr4 (132-164)||(30031950-30031982)
chr4 (135-163)||(30794986-30795014)
chr4 (133-165)||(36669296-36669328)
chr4 (132-164)||(37255562-37255594)
chr4 (135-167)||(39767017-39767049)
chr4 (132-164)||(39910606-39910638)
chr4 (132-164)||(39911068-39911100)
chr4 (134-166)||(50683598-50683630)
[»] chr3 (19 HSPs)
chr3 (133-164)||(18713556-18713587)
chr3 (133-164)||(41187705-41187736)
chr3 (133-164)||(48180827-48180858)
chr3 (133-164)||(49083318-49083349)
chr3 (133-164)||(54851829-54851860)
chr3 (133-164)||(55378745-55378776)
chr3 (134-164)||(11120906-11120936)
chr3 (134-164)||(17380275-17380305)
chr3 (134-164)||(19158855-19158885)
chr3 (134-164)||(33805960-33805990)
chr3 (133-166)||(33898966-33898999)
chr3 (135-164)||(40852769-40852798)
chr3 (135-164)||(45300873-45300902)
chr3 (135-164)||(49492146-49492175)
chr3 (132-164)||(28769339-28769371)
chr3 (133-165)||(31310894-31310926)
chr3 (132-164)||(41749278-41749310)
chr3 (135-163)||(42373766-42373794)
chr3 (132-164)||(43140526-43140558)
[»] chr1 (24 HSPs)
chr1 (133-164)||(23799941-23799972)
chr1 (133-164)||(35428796-35428827)
chr1 (133-164)||(46947440-46947471)
chr1 (133-164)||(50873917-50873948)
chr1 (134-164)||(3336675-3336705)
chr1 (134-164)||(14422623-14422653)
chr1 (134-164)||(35864314-35864344)
chr1 (135-165)||(46313421-46313451)
chr1 (133-167)||(46917276-46917310)
chr1 (135-164)||(17934753-17934782)
chr1 (135-164)||(22867389-22867418)
chr1 (135-164)||(31682871-31682900)
chr1 (135-164)||(33523822-33523851)
chr1 (133-166)||(35950332-35950365)
chr1 (135-164)||(36042324-36042353)
chr1 (134-167)||(36774715-36774748)
chr1 (135-164)||(38163820-38163849)
chr1 (134-163)||(44521463-44521492)
chr1 (135-164)||(45238240-45238269)
chr1 (135-164)||(50874382-50874411)
chr1 (133-165)||(6401617-6401649)
chr1 (132-164)||(16690182-16690214)
chr1 (134-166)||(29451883-29451915)
chr1 (132-164)||(41885525-41885557)
[»] scaffold0012 (1 HSPs)
scaffold0012 (134-164)||(48744-48774)
[»] scaffold0118 (1 HSPs)
scaffold0118 (135-164)||(15012-15041)
[»] scaffold0066 (1 HSPs)
scaffold0066 (136-164)||(16826-16854)


Alignment Details
Target: chr7 (Bit Score: 134; Significance: 9e-70; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 35374598 - 35374436
Alignment:
Q  1 agttggtattgctcatatttttggtacagttgatggcatgttcaagttctttataatacttgcattcaagtagctaatgactagaactccaacccttaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35374598 agttggtattgctcatatttttggtacagttgatggcatgttcaagttctttataatacttgcattcaagtagctaatgactagaactccaacccttgca 35374499  T
Q  101 tattatatatgatatacgtacgtactaattgagtatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||||    ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  35374498 tattatatatgata----tacatactaattgagtatatttatagggattaaaaatatatttaactca 35374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 35374401 - 35374306
Alignment:
Q  202 actcacatagagactatggtccatccttccttaaaataaaaaagagaacacatatatgctagtaatttgatgtctagctaattatttcaacgatgatgtc 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||||    
T  35374401 actcacatagagactatggtccatccttccttaaaataaaaaagagaacacatatatgctagtaatttgatgt----ctaattatttcaacaatgatgtc 35374306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 47303333 - 47303365
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||||    
T  47303333 agtatatttatagggatcaaaaacatatttaac 47303365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 31716750 - 31716719
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  31716750 gtatatttatagggatcaaaaacatatttaac 31716719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 43469615 - 43469646
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  43469615 gtatatttatagggatcaaaaacatatttaac 43469646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 2688155 - 2688125
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  2688155 tatatttatagggatcaaaaacatatttaac 2688125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 18766515 - 18766481
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||||| |||||||||||||||||||    
T  18766515 gtatatttatagggaccaaaaacatatttaactca 18766481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 24518520 - 24518490
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  24518520 tatatttatagggatcaaaaacatatttaac 24518490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 30903650 - 30903680
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  30903650 tatatttatagggatcaaaaacatatttaac 30903680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 165
Target Start/End: Complemental strand, 42264787 - 42264757
Alignment:
Q  135 atatttatagggatcaaaaacatatttaact 165  Q
    |||||||||||||||||||||||||||||||    
T  42264787 atatttatagggatcaaaaacatatttaact 42264757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 43301511 - 43301481
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  43301511 tatatttatagggatcaaaaacatatttaac 43301481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 48614259 - 48614229
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  48614259 tatatttatagggatcaaaaacatatttaac 48614229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 3143438 - 3143467
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  3143438 atatttatagggatcaaaaacatatttaac 3143467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 3232414 - 3232443
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  3232414 atatttatagggatcaaaaacatatttaac 3232443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 26253639 - 26253668
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  26253639 atatttatagggatcaaaaacatatttaac 26253668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 29189668 - 29189639
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  29189668 atatttatagggatcaaaaacatatttaac 29189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 32860250 - 32860217
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  32860250 gtatatttatagggaccaaaaacatatttaactc 32860217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 41936981 - 41937010
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaa 163  Q
    ||||||||||||||||||||||||||||||    
T  41936981 tatatttatagggatcaaaaacatatttaa 41937010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 45020999 - 45020970
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  45020999 atatttatagggatcaaaaacatatttaac 45020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 47579689 - 47579660
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaa 163  Q
    ||||||||||||||||||||||||||||||    
T  47579689 tatatttatagggatcaaaaacatatttaa 47579660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 1023708 - 1023740
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  1023708 agtatatttatagggaccaaaaacatatttaac 1023740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 1730395 - 1730363
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  1730395 agtatatttatagggaccaaaaacatatttaac 1730363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 1975908 - 1975880
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  1975908 atatttatagggatcaaaaacatatttaa 1975880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 2963456 - 2963488
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||| ||||||||||||    
T  2963456 agtatatttatagggatcaataacatatttaac 2963488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 22867314 - 22867346
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  22867314 agtatatttatagggaccaaaaacatatttaac 22867346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 29655531 - 29655563
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaact 165  Q
    |||||||||||||||| ||||||||||||||||    
T  29655531 gtatatttatagggatgaaaaacatatttaact 29655563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 42670971 - 42670999
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  42670971 atatttatagggatcaaaaacatatttaa 42670999  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 2629897 - 2629864
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||||||||||||||||||||||||    
T  2629897 tatatttatagggatcaaaaacatatttaactca 2629864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 1997428 - 1997460
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||||||||||||||||||||||||    
T  1997428 tatatttatagggatcaaaaacatatttaactc 1997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 21010745 - 21010714
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  21010745 gtatatttatagggatcaaaaacatatttaac 21010714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 23388815 - 23388849
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||||||| ||||||||||||||||||    
T  23388815 agtatatttatagggaccaaaaacatatttaactc 23388849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 18078738 - 18078705
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||| |||||||||||||||||||||||    
T  18078738 gtatatttatcgggatcaaaaacatatttaactc 18078705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 33809887 - 33809850
Alignment:
Q  127 aattgagtatatttatagggatcaaaaacatatttaac 164  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  33809887 aattgactatatttatagggaccaaaaacatatttaac 33809850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 27990525 - 27990557
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||||||| |||||||||||||    
T  27990525 tatatttatagggatcaaagacatatttaactc 27990557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 28077058 - 28077090
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||||||| |||||||||||||    
T  28077058 tatatttatagggatcaaagacatatttaactc 28077090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 41438302 - 41438330
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  41438302 atatttatagggatcaaaaacatatttaa 41438330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 45133788 - 45133756
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||||| ||||||||||||||||||    
T  45133788 tatatttatagggaccaaaaacatatttaactc 45133756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 11170180 - 11170211
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  11170180 gtatatttatagggatcaaaaacatatttaac 11170211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 19294706 - 19294675
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaa 163  Q
    ||||||||||||||||||||||||||||||||    
T  19294706 agtatatttatagggatcaaaaacatatttaa 19294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 165
Target Start/End: Original strand, 29197729 - 29197760
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaact 165  Q
    ||||||||||||||||||||||||||||||||    
T  29197729 tatatttatagggatcaaaaacatatttaact 29197760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 35778681 - 35778712
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  35778681 gtatatttatagggatcaaaaacatatttaac 35778712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 36102166 - 36102135
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  36102166 gtatatttatagggatcaaaaacatatttaac 36102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 5728713 - 5728683
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  5728713 tatatttatagggatcaaaaacatatttaac 5728683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 14395775 - 14395805
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  14395775 tatatttatagggatcaaaaacatatttaac 14395805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 33292776 - 33292806
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  33292776 tatatttatagggatcaaaaacatatttaac 33292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 16037236 - 16037265
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  16037236 atatttatagggatcaaaaacatatttaac 16037265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 19295134 - 19295163
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  19295134 atatttatagggatcaaaaacatatttaac 19295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 27343737 - 27343766
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  27343737 atatttatagggatcaaaaacatatttaac 27343766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 38798419 - 38798386
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  38798419 gtatatttatagggaccaaaaacatatttaactc 38798386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 40668461 - 40668428
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaact 165  Q
    |||||||||||||||| |||||||||||||||||    
T  40668461 agtatatttatagggaccaaaaacatatttaact 40668428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 4418692 - 4418664
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  4418692 atatttatagggatcaaaaacatatttaa 4418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 33575448 - 33575480
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||| |||||||||    
T  33575448 agtatatttatagggatcaaaaatatatttaac 33575480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 38389896 - 38389928
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||| ||||||||||||||||||||    
T  38389896 agtatatttataaggatcaaaaacatatttaac 38389928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 42148473 - 42148441
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  42148473 agtatatttatagggaccaaaaacatatttaac 42148441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 42148906 - 42148938
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  42148906 agtatatttatagggaccaaaaacatatttaac 42148938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 42641384 - 42641416
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  42641384 agtatatttatagggaccaaaaacatatttaac 42641416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 17544902 - 17544871
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  17544902 gtatatttatagggatcaaaaacatatttaac 17544871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 17545340 - 17545371
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  17545340 gtatatttatagggatcaaaaacatatttaac 17545371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 33599899 - 33599930
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  33599899 gtatatttatagggatcaaaaacatatttaac 33599930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 18153745 - 18153711
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||||| |||||||||||||||||||    
T  18153745 gtatatttatagggaccaaaaacatatttaactca 18153711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 165
Target Start/End: Complemental strand, 25022462 - 25022432
Alignment:
Q  135 atatttatagggatcaaaaacatatttaact 165  Q
    |||||||||||||||||||||||||||||||    
T  25022462 atatttatagggatcaaaaacatatttaact 25022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 1092426 - 1092463
Alignment:
Q  127 aattgagtatatttatagggatcaaaaacatatttaac 164  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  1092426 aatttagtatatttatagggataaaaaacatatttaac 1092463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 7683953 - 7683982
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  7683953 atatttatagggatcaaaaacatatttaac 7683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 8149570 - 8149599
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  8149570 atatttatagggatcaaaaacatatttaac 8149599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 7575710 - 7575678
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  7575710 agtatatttatagggaccaaaaacatatttaac 7575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 19152803 - 19152771
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  19152803 agtatatttatagggaccaaaaacatatttaac 19152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 19680913 - 19680945
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  19680913 agtatatttatagggaccaaaaacatatttaac 19680945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 7411500 - 7411531
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  7411500 gtatatttatagggatcaaaaacatatttaac 7411531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 28767625 - 28767656
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  28767625 gtatatttatagggatcaaaaacatatttaac 28767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 33686490 - 33686459
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  33686490 gtatatttatagggatcaaaaacatatttaac 33686459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 43390526 - 43390495
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  43390526 gtatatttatagggatcaaaaacatatttaac 43390495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 6516350 - 6516320
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  6516350 tatatttatagggatcaaaaacatatttaac 6516320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 14322661 - 14322627
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactca 167  Q
    |||||||||||||||| ||||||||||||||||||    
T  14322661 gtatatttatagggataaaaaacatatttaactca 14322627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 19103928 - 19103898
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  19103928 tatatttatagggatcaaaaacatatttaac 19103898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 42661377 - 42661347
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  42661377 tatatttatagggatcaaaaacatatttaac 42661347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 4591304 - 4591333
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  4591304 atatttatagggatcaaaaacatatttaac 4591333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 7002175 - 7002204
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  7002175 atatttatagggatcaaaaacatatttaac 7002204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 11375002 - 11374973
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  11375002 atatttatagggatcaaaaacatatttaac 11374973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 26019872 - 26019843
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  26019872 atatttatagggatcaaaaacatatttaac 26019843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 28767238 - 28767209
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  28767238 atatttatagggatcaaaaacatatttaac 28767209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 32400948 - 32400981
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  32400948 gtatatttatagggaccaaaaacatatttaactc 32400981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 34728542 - 34728513
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  34728542 atatttatagggatcaaaaacatatttaac 34728513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 39728977 - 39728944
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactca 167  Q
    |||||||||||||||||||| |||||||||||||    
T  39728977 tatatttatagggatcaaaagcatatttaactca 39728944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 4822316 - 4822284
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||| ||||||||||||||||||||||||    
T  4822316 tatatttagagggatcaaaaacatatttaactc 4822284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 7468860 - 7468892
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||||||||||| ||||||||||||    
T  7468860 tatatttatagggatcaaaatcatatttaactc 7468892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 8647211 - 8647243
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  8647211 agtatatttatagggaccaaaaacatatttaac 8647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 26240994 - 26240962
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||| ||||||||||||||||||||    
T  26240994 tatatttataggtatcaaaaacatatttaactc 26240962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 36976706 - 36976674
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||| |||||||||||||||||||    
T  36976706 agtatatttatagagatcaaaaacatatttaac 36976674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 35119951 - 35119920
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  35119951 gtatatttatagggatcaaaaacatatttaac 35119920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 54788666 - 54788635
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaa 163  Q
    ||||||||||||||||||||||||||||||||    
T  54788666 agtatatttatagggatcaaaaacatatttaa 54788635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 5497121 - 5497151
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  5497121 tatatttatagggatcaaaaacatatttaac 5497151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 34373584 - 34373614
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  34373584 tatatttatagggatcaaaaacatatttaac 34373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 52021243 - 52021209
Alignment:
Q  130 tgagtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||| ||||||||||||||||||||    
T  52021243 tgagtatatttataaggatcaaaaacatatttaac 52021209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 12698877 - 12698906
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  12698877 atatttatagggatcaaaaacatatttaac 12698906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 14479334 - 14479301
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  14479334 gtatatttatagggaccaaaaacatatttaactc 14479301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 19037420 - 19037391
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  19037420 atatttatagggatcaaaaacatatttaac 19037391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 23454380 - 23454351
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  23454380 atatttatagggatcaaaaacatatttaac 23454351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 26649761 - 26649732
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  26649761 atatttatagggatcaaaaacatatttaac 26649732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 29771572 - 29771543
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  29771572 atatttatagggatcaaaaacatatttaac 29771543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 54789094 - 54789123
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  54789094 atatttatagggatcaaaaacatatttaac 54789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 25108363 - 25108331
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaact 165  Q
    ||||||||||||||| |||||||||||||||||    
T  25108363 gtatatttatagggaccaaaaacatatttaact 25108331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 30031950 - 30031982
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  30031950 agtatatttatagggaccaaaaacatatttaac 30031982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 30794986 - 30795014
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  30794986 atatttatagggatcaaaaacatatttaa 30795014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 36669328 - 36669296
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaact 165  Q
    ||||||||||||||| |||||||||||||||||    
T  36669328 gtatatttatagggaccaaaaacatatttaact 36669296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 37255562 - 37255594
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  37255562 agtatatttatagggaccaaaaacatatttaac 37255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 39767017 - 39767049
Alignment:
Q  135 atatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||| |||||||||||||||||||    
T  39767017 atatttatagggaccaaaaacatatttaactca 39767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 39910638 - 39910606
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  39910638 agtatatttatagggaccaaaaacatatttaac 39910606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 39911068 - 39911100
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  39911068 agtatatttatagggaccaaaaacatatttaac 39911100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 50683598 - 50683630
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| |||||||||||||||||    
T  50683598 tatatttatagggataaaaaacatatttaactc 50683630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 18713556 - 18713587
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  18713556 gtatatttatagggatcaaaaacatatttaac 18713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 41187705 - 41187736
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  41187705 gtatatttatagggatcaaaaacatatttaac 41187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 48180827 - 48180858
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  48180827 gtatatttatagggatcaaaaacatatttaac 48180858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 49083349 - 49083318
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  49083349 gtatatttatagggatcaaaaacatatttaac 49083318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 54851829 - 54851860
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  54851829 gtatatttatagggatcaaaaacatatttaac 54851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 55378776 - 55378745
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  55378776 gtatatttatagggatcaaaaacatatttaac 55378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 11120906 - 11120936
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  11120906 tatatttatagggatcaaaaacatatttaac 11120936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 17380305 - 17380275
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  17380305 tatatttatagggatcaaaaacatatttaac 17380275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 19158885 - 19158855
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  19158885 tatatttatagggatcaaaaacatatttaac 19158855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 33805990 - 33805960
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  33805990 tatatttatagggatcaaaaacatatttaac 33805960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 33898966 - 33898999
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  33898966 gtatatttatagggaccaaaaacatatttaactc 33898999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 40852798 - 40852769
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  40852798 atatttatagggatcaaaaacatatttaac 40852769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 45300902 - 45300873
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  45300902 atatttatagggatcaaaaacatatttaac 45300873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 49492146 - 49492175
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  49492146 atatttatagggatcaaaaacatatttaac 49492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 28769339 - 28769371
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  28769339 agtatatttatagggagcaaaaacatatttaac 28769371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 31310926 - 31310894
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaact 165  Q
    ||||||||||| |||||||||||||||||||||    
T  31310926 gtatatttataaggatcaaaaacatatttaact 31310894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 41749278 - 41749310
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  41749278 agtatatttatagggaccaaaaacatatttaac 41749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 42373766 - 42373794
Alignment:
Q  135 atatttatagggatcaaaaacatatttaa 163  Q
    |||||||||||||||||||||||||||||    
T  42373766 atatttatagggatcaaaaacatatttaa 42373794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 43140558 - 43140526
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  43140558 agtatatttatagggaccaaaaacatatttaac 43140526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 23799972 - 23799941
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  23799972 gtatatttatagggatcaaaaacatatttaac 23799941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 35428827 - 35428796
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  35428827 gtatatttatagggatcaaaaacatatttaac 35428796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Original strand, 46947440 - 46947471
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  46947440 gtatatttatagggatcaaaaacatatttaac 46947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 50873948 - 50873917
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||||    
T  50873948 gtatatttatagggatcaaaaacatatttaac 50873917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 3336675 - 3336705
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  3336675 tatatttatagggatcaaaaacatatttaac 3336705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 14422653 - 14422623
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  14422653 tatatttatagggatcaaaaacatatttaac 14422623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 35864344 - 35864314
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  35864344 tatatttatagggatcaaaaacatatttaac 35864314  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 165
Target Start/End: Complemental strand, 46313451 - 46313421
Alignment:
Q  135 atatttatagggatcaaaaacatatttaact 165  Q
    |||||||||||||||||||||||||||||||    
T  46313451 atatttatagggatcaaaaacatatttaact 46313421  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 46917310 - 46917276
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||||||| |||||||||||||||||||    
T  46917310 gtatatttatagggaccaaaaacatatttaactca 46917276  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 17934782 - 17934753
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  17934782 atatttatagggatcaaaaacatatttaac 17934753  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 22867418 - 22867389
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  22867418 atatttatagggatcaaaaacatatttaac 22867389  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 31682900 - 31682871
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  31682900 atatttatagggatcaaaaacatatttaac 31682871  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 33523851 - 33523822
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  33523851 atatttatagggatcaaaaacatatttaac 33523822  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 35950365 - 35950332
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaactc 166  Q
    ||||||||||||||| ||||||||||||||||||    
T  35950365 gtatatttatagggaccaaaaacatatttaactc 35950332  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 36042353 - 36042324
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  36042353 atatttatagggatcaaaaacatatttaac 36042324  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 36774715 - 36774748
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactca 167  Q
    ||||||||||| ||||||||||||||||||||||    
T  36774715 tatatttatagagatcaaaaacatatttaactca 36774748  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 38163820 - 38163849
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  38163820 atatttatagggatcaaaaacatatttaac 38163849  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 44521463 - 44521492
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaa 163  Q
    ||||||||||||||||||||||||||||||    
T  44521463 tatatttatagggatcaaaaacatatttaa 44521492  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 45238240 - 45238269
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  45238240 atatttatagggatcaaaaacatatttaac 45238269  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 50874382 - 50874411
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  50874382 atatttatagggatcaaaaacatatttaac 50874411  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 6401649 - 6401617
Alignment:
Q  133 gtatatttatagggatcaaaaacatatttaact 165  Q
    ||||||||||||||| |||||||||||||||||    
T  6401649 gtatatttatagggaccaaaaacatatttaact 6401617  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 16690214 - 16690182
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  16690214 agtatatttatagggaccaaaaacatatttaac 16690182  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 29451915 - 29451883
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaactc 166  Q
    |||||||||||||| ||||||||||||||||||    
T  29451915 tatatttatagggaccaaaaacatatttaactc 29451883  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 41885525 - 41885557
Alignment:
Q  132 agtatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||| ||||||||||||||||    
T  41885525 agtatatttatagggaccaaaaacatatttaac 41885557  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 48774 - 48744
Alignment:
Q  134 tatatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||||    
T  48774 tatatttatagggatcaaaaacatatttaac 48744  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 15041 - 15012
Alignment:
Q  135 atatttatagggatcaaaaacatatttaac 164  Q
    ||||||||||||||||||||||||||||||    
T  15041 atatttatagggatcaaaaacatatttaac 15012  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 16826 - 16854
Alignment:
Q  136 tatttatagggatcaaaaacatatttaac 164  Q
    |||||||||||||||||||||||||||||    
T  16826 tatttatagggatcaaaaacatatttaac 16854  T

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