View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3739_low_9 (Length: 501)

Name: NF3739_low_9
Description: NF3739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3739_low_9
NF3739_low_9
[»] chr1 (3 HSPs)
chr1 (207-479)||(15594251-15594523)
chr1 (231-263)||(29465281-29465313)
chr1 (326-428)||(4679353-4679455)
[»] chr7 (15 HSPs)
chr7 (221-427)||(8586400-8586609)
chr7 (228-431)||(8653708-8653911)
chr7 (300-431)||(8666680-8666811)
chr7 (336-469)||(8615938-8616071)
chr7 (231-431)||(10495078-10495278)
chr7 (326-427)||(17259498-17259599)
chr7 (231-275)||(13334072-13334116)
chr7 (228-275)||(3146684-3146731)
chr7 (326-431)||(3146528-3146633)
chr7 (334-429)||(6788775-6788870)
chr7 (228-275)||(8646297-8646344)
chr7 (229-274)||(8616136-8616181)
chr7 (326-427)||(17267201-17267302)
chr7 (231-275)||(17267359-17267403)
chr7 (231-275)||(17275013-17275057)
[»] chr2 (6 HSPs)
chr2 (337-431)||(16658333-16658427)
chr2 (326-427)||(16662797-16662898)
chr2 (228-275)||(7541646-7541693)
chr2 (229-268)||(14702835-14702874)
chr2 (228-266)||(16658221-16658259)
chr2 (382-431)||(12246267-12246316)
[»] chr4 (3 HSPs)
chr4 (342-427)||(30774517-30774602)
chr4 (228-275)||(9336595-9336642)
chr4 (334-388)||(35131763-35131817)
[»] chr8 (1 HSPs)
chr8 (228-275)||(43744236-43744283)
[»] chr3 (1 HSPs)
chr3 (229-275)||(53416761-53416807)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 207 - 479
Target Start/End: Complemental strand, 15594523 - 15594251
Alignment:
Q  207 caagccaatgtgaaaattcaggtttatgagggtgagagagcaagagctagtgacaataattttcttggtatgttgactctttcttgcacttcgggtcccc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15594523 caagccaatgtgaaaattcaggtttatgagggtgagagagcaagagctagtgacaataatttgcttggtatgttgactctttcttgcacttcgggtcccc 15594424  T
Q  307 gtggccagacctttgaaagatgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaat 406  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15594423 gtggccagacctttgaaggatgctttgctatcgatgaaaatgctatcctgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaat 15594324  T
Q  407 aaccaatgacaaagaaaggttgtcagcatatgaaattnnnnnnntgattcaagaagccgaggaatatcgtgct 479  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  15594323 aaccaatgacaaagaaaggttgtcagcatatgaaattaaaaaaatgattcaagaagccgaggaatatcgtgct 15594251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 29465313 - 29465281
Alignment:
Q  231 tatgagggtgagagagcaagagctagtgacaat 263  Q
    |||||||||||||||||||||||||||||||||    
T  29465313 tatgagggtgagagagcaagagctagtgacaat 29465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 4679353 - 4679455
Alignment:
Q  326 atgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg 425  Q
    |||||||||||| |||| |||||| | | | ||||||||||  || ||||  || || || ||||| ||| ||||||| ||||||||||| |||||||||    
T  4679353 atgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatcaccataaccaatgaaaaagaaagg 4679452  T
Q  426 ttg 428  Q
    |||    
T  4679453 ttg 4679455  T

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Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 221 - 427
Target Start/End: Original strand, 8586400 - 8586609
Alignment:
Q  221 aattcaggtttatgagggtgagagagcaagagctagtgacaataattttcttggtatgttgactctttcttgcacttcgggt---ccccgtggccagacc 317  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| | |||||  | || | |||||| |||    |||||   || ||||| ||  ||    
T  8586400 aattaaggtttatgagggtgagagagcaagagctagtgacaacaatctgcttggcttttttaatctttcgtgcgtcccgggtgctcctcgtgggcatccc 8586499  T
Q  318 tttgaaagatgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgaca 417  Q
    |||||   ||||||  | |||||||||||||||||| | |||||||||| |||||||| |||| |||||||||||||||| || || |||||||||||||    
T  8586500 tttgaggtatgcttcaccatcgatgaaaatggtatcctaactgtttctgcgaaggaaatatcctctggcaatacaaacgaaataacgataaccaatgaca 8586599  T
Q  418 aagaaaggtt 427  Q
    ||||||||||    
T  8586600 aagaaaggtt 8586609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 431
Target Start/End: Complemental strand, 8653911 - 8653708
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggtatgttgactctttcttgcacttcgggtccccgtggccagacctttgaaagat 327  Q
    |||||||||||||||||| |||||||||||||||||||| | |||||| | || || |||||||||  | | ||||||||||| ||| |||| ||   ||    
T  8653911 gtttatgagggtgagagaccaagagctagtgacaataatctgcttggtttatttacactttcttgccttccaggtccccgtggtcagcccttggaggtat 8653812  T
Q  328 gctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggtt 427  Q
    ||||| | || ||||||||||||||| | ||||||||||  ||||| |   ||||||| | |   ||||||||||| || || ||||| |||||||||||    
T  8653811 gcttttccattgatgaaaatggtatcttaactgtttctggtaaggatatcaccactggaattctgaacgagatcaccatcactaatgagaaagaaaggtt 8653712  T
Q  428 gtca 431  Q
    ||||    
T  8653711 gtca 8653708  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 431
Target Start/End: Complemental strand, 8666811 - 8666680
Alignment:
Q  300 ggtccccgtggccagacctttgaaagatgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgaga 399  Q
    ||||||||||||||| |||| ||   ||||||| | || ||||||||||||||| |||||||| |||  | ||||| |||||| |||||||  |||  ||    
T  8666811 ggtccccgtggccagcccttggaggtatgcttttcaattgatgaaaatggtatcctgactgttactgctagggaaatatccacaggcaatatgaacatga 8666712  T
Q  400 tcacaataaccaatgacaaagaaaggttgtca 431  Q
    |||| |||||||||||||||||||||||||||    
T  8666711 tcaccataaccaatgacaaagaaaggttgtca 8666680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 469
Target Start/End: Complemental strand, 8616071 - 8615938
Alignment:
Q  336 atcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgtcagcat 435  Q
    ||||| || ||||||||| | ||||| |||| |||||||| ||| |||||||||||||| || || || ||||||||||||||||||||||| || ||      
T  8616071 atcgacgataatggtatccttactgtatctgcgaaggaaaaatctactggcaatacaaatgaaataacgataaccaatgacaaagaaaggttatcggctg 8615972  T
Q  436 atgaaattnnnnnnntgattcaagaagccgagga 469  Q
    ||||||||       ||||||||||||| |||||    
T  8615971 atgaaattaaaaaactgattcaagaagcagagga 8615938  T

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Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 431
Target Start/End: Original strand, 10495078 - 10495278
Alignment:
Q  231 tatgagggtgagagagcaagagctagtgacaataattttcttggtatgttgactctttcttgcacttcgggtccccgtggccagacctttgaaagatgct 330  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||   ||  | |||  ||    ||| ||||| ||||||||| |||| ||   |||||    
T  10495078 tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgct 10495177  T
Q  331 ttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgtc 430  Q
    || | || ||||||||||| ||| |||||||| |||  ||||| | ||| || |||||||  |||| |||||| || || ||||||||||||||||||||    
T  10495178 tttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaagaaaggttgtc 10495277  T
Q  431 a 431  Q
    |    
T  10495278 a 10495278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 17259599 - 17259498
Alignment:
Q  326 atgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg 425  Q
    |||||||| ||||||| ||||||||||  |||| |||||||  | ||| | ||||||||||| ||  || ||||| ||||||||||||||||||| ||||    
T  17259599 atgctttgatatcgatcaaaatggtattttgacagtttctgctatggacaaatccactggcagtaagaatgagattacaataaccaatgacaaaggaagg 17259500  T
Q  426 tt 427  Q
    ||    
T  17259499 tt 17259498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 13334072 - 13334116
Alignment:
Q  231 tatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  13334072 tatgagggtgagagagcaagagctagtgacaataatctacttggt 13334116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 3146731 - 3146684
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  3146731 gtttatgagggtgagagagcaagagctagtgacaacaatctgcttggt 3146684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 3146633 - 3146528
Alignment:
Q  326 atgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg 425  Q
    ||||||| ||||| |||||||||| ||| | | ||||||||  || |||| ||||||||| | ||| || ||||| ||| |||| ||||||||||||||     
T  3146633 atgctttactatcaatgaaaatggcatcttaattgtttctgctaatgaaaaatccactggtagtacgaatgagattacagtaactaatgacaaagaaaga 3146534  T
Q  426 ttgtca 431  Q
    ||||||    
T  3146533 ttgtca 3146528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 429
Target Start/End: Complemental strand, 6788870 - 6788775
Alignment:
Q  334 ctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgt 429  Q
    |||| ||||||||||||||  |||| |||||||  |  |||| |||||| |||||||  || ||||| || ||||||||| |||||||||||||||    
T  6788870 ctattgatgaaaatggtattttgaccgtttctgctactgaaaaatccacgggcaatatgaatgagattaccataaccaattacaaagaaaggttgt 6788775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 8646344 - 8646297
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    |||||||||||||||||||||||||| |||||||| ||| | ||||||    
T  8646344 gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggt 8646297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 8616181 - 8616136
Alignment:
Q  229 tttatgagggtgagagagcaagagctagtgacaataattttcttgg 274  Q
    ||||||||||||||||| |||||||||||||||| ||| | |||||    
T  8616181 tttatgagggtgagagatcaagagctagtgacaacaatctgcttgg 8616136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 17267302 - 17267201
Alignment:
Q  326 atgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg 425  Q
    |||||||| | ||||| ||||||||||  |||| |||||||  | ||| | ||||||||| | ||  || ||||| ||||||||||||||||||| ||||    
T  17267302 atgctttgatgtcgatcaaaatggtattttgacagtttctgctatggacaaatccactggtagtaagaatgagattacaataaccaatgacaaaggaagg 17267203  T
Q  426 tt 427  Q
    ||    
T  17267202 tt 17267201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 17267403 - 17267359
Alignment:
Q  231 tatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    ||||||||||||||| ||||||| ||||||||| || ||||||||    
T  17267403 tatgagggtgagagaccaagagcaagtgacaatcatcttcttggt 17267359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 17275057 - 17275013
Alignment:
Q  231 tatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    ||||||||||||||| ||||||| ||||||||| || ||||||||    
T  17275057 tatgagggtgagagaccaagagcaagtgacaatcatcttcttggt 17275013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 16658333 - 16658427
Alignment:
Q  337 tcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgtca 431  Q
    ||||||||||||||||| | ||||||||||  ||||||  ||| || || ||||||||| ||||||| ||||||||||| |||||||| ||||||    
T  16658333 tcgatgaaaatggtatcctaactgtttctgctaaggaagtatctacaggaaatacaaacaagatcaccataaccaatgaaaaagaaagattgtca 16658427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 16662797 - 16662898
Alignment:
Q  326 atgctttgctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaagg 425  Q
    ||||||||||||||||||||| || ||| | |||||||| |   |||||| |||||| || | ||  || |||||||| |||||||||||||||||||||    
T  16662797 atgctttgctatcgatgaaaacggcatcttaactgtttcagcagaggaaagatccaccggaagtaagaatgagatcacgataaccaatgacaaagaaagg 16662896  T
Q  426 tt 427  Q
    ||    
T  16662897 tt 16662898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 7541693 - 7541646
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    |||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  7541693 gtttatgagggtgagagagcaagagccagtgataacaatttgcttggt 7541646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 14702874 - 14702835
Alignment:
Q  229 tttatgagggtgagagagcaagagctagtgacaataattt 268  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  14702874 tttatgagggtgagagaacaagagccagtgacaataattt 14702835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 16658221 - 16658259
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataat 266  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  16658221 gtttatgagggtgagagagcaagagctgctgacaataat 16658259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 12246267 - 12246316
Alignment:
Q  382 ctggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgtca 431  Q
    |||||||| |||| ||||| |||||||| ||| |||||||||||||||||    
T  12246267 ctggcaattcaaatgagattacaataactaattacaaagaaaggttgtca 12246316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 30774602 - 30774517
Alignment:
Q  342 gaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggtt 427  Q
    |||||||||||  ||| ||||||||  | ||||| ||||||||||||||  || |||||||| |||||||| ||||||||||||||    
T  30774602 gaaaatggtatactgaatgtttctgctatggaaaaatccactggcaatatgaatgagatcacgataaccaacgacaaagaaaggtt 30774517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 9336595 - 9336642
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    |||||||||||||||||| ||||||||| |||||||||| | ||||||    
T  9336595 gtttatgagggtgagagaccaagagctactgacaataatctgcttggt 9336642  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 35131817 - 35131763
Alignment:
Q  334 ctatcgatgaaaatggtatcatgactgtttctgtgaaggaaacatccactggcaa 388  Q
    |||||||||||||||||||  ||||||||||||  ||||||| |||||| |||||    
T  35131817 ctatcgatgaaaatggtattttgactgtttctgctaaggaaaaatccaccggcaa 35131763  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 43744283 - 43744236
Alignment:
Q  228 gtttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    |||||||||||||||||||||||||| |||||||| ||| | ||||||    
T  43744283 gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggt 43744236  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 53416761 - 53416807
Alignment:
Q  229 tttatgagggtgagagagcaagagctagtgacaataattttcttggt 275  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||||||    
T  53416761 tttatgagggtgagagaccaagagctactgacaataatctgcttggt 53416807  T

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