View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3741_low_6 (Length: 257)

Name: NF3741_low_6
Description: NF3741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3741_low_6
NF3741_low_6
[»] chr6 (26 HSPs)
chr6 (122-239)||(3797643-3797760)
chr6 (2-121)||(3788078-3788197)
chr6 (17-81)||(35031011-35031075)
chr6 (47-85)||(8417879-8417917)
chr6 (17-94)||(6330171-6330248)
chr6 (17-94)||(11572142-11572219)
chr6 (17-81)||(2830391-2830455)
chr6 (17-81)||(8382979-8383043)
chr6 (17-81)||(9644752-9644816)
chr6 (17-81)||(9650769-9650833)
chr6 (17-81)||(13853603-13853667)
chr6 (17-81)||(22896518-22896582)
chr6 (17-81)||(26602379-26602443)
chr6 (47-94)||(2830332-2830379)
chr6 (47-93)||(8099528-8099574)
chr6 (47-93)||(11572231-11572277)
chr6 (47-92)||(8383055-8383100)
chr6 (47-92)||(33052880-33052925)
chr6 (47-91)||(6330115-6330159)
chr6 (17-81)||(8099586-8099650)
chr6 (17-81)||(8417803-8417867)
chr6 (33-85)||(14936529-14936581)
chr6 (36-72)||(17498641-17498677)
chr6 (17-81)||(17992044-17992108)
chr6 (47-91)||(26602323-26602367)
chr6 (17-81)||(33052804-33052868)
[»] chr4 (40 HSPs)
chr4 (122-239)||(51263946-51264063)
chr4 (17-95)||(3904679-3904757)
chr4 (17-92)||(5986932-5987007)
chr4 (17-94)||(3993032-3993109)
chr4 (17-81)||(46797781-46797845)
chr4 (17-81)||(47838627-47838691)
chr4 (17-81)||(51894592-51894656)
chr4 (35-78)||(6422541-6422584)
chr4 (17-81)||(6121903-6121967)
chr4 (17-81)||(20538696-20538760)
chr4 (17-81)||(40913199-40913263)
chr4 (17-81)||(41469776-41469840)
chr4 (17-81)||(42797788-42797852)
chr4 (17-81)||(47833667-47833731)
chr4 (47-94)||(26231574-26231621)
chr4 (34-73)||(29845663-29845702)
chr4 (47-94)||(33551198-33551245)
chr4 (17-76)||(50430433-50430492)
chr4 (47-81)||(4780381-4780415)
chr4 (17-95)||(53337426-53337504)
chr4 (47-92)||(3372120-3372165)
chr4 (20-81)||(3422119-3422180)
chr4 (47-92)||(3992975-3993020)
chr4 (47-96)||(7579305-7579354)
chr4 (35-92)||(17236862-17236919)
chr4 (32-81)||(44900090-44900139)
chr4 (47-92)||(47833610-47833655)
chr4 (47-92)||(48336262-48336307)
chr4 (50-91)||(52756675-52756716)
chr4 (41-81)||(1716311-1716351)
chr4 (17-81)||(3372177-3372241)
chr4 (47-91)||(20538772-20538816)
chr4 (41-81)||(21892219-21892259)
chr4 (47-91)||(24704370-24704414)
chr4 (17-81)||(33621852-33621916)
chr4 (17-81)||(41615686-41615750)
chr4 (17-81)||(43900605-43900669)
chr4 (17-81)||(48336319-48336383)
chr4 (17-81)||(52756731-52756795)
chr4 (47-91)||(53337370-53337414)
[»] chr8 (46 HSPs)
chr8 (123-239)||(43322339-43322454)
chr8 (122-239)||(7122789-7122906)
chr8 (135-239)||(24601291-24601395)
chr8 (29-81)||(33057662-33057714)
chr8 (2-77)||(17006952-17007027)
chr8 (2-77)||(17570220-17570295)
chr8 (17-81)||(12343150-12343214)
chr8 (17-81)||(27422246-27422310)
chr8 (17-81)||(32211373-32211437)
chr8 (17-81)||(43199364-43199428)
chr8 (17-95)||(2890158-2890236)
chr8 (47-92)||(12763740-12763785)
chr8 (17-81)||(54622-54686)
chr8 (17-81)||(6552711-6552775)
chr8 (17-81)||(7785788-7785852)
chr8 (17-81)||(32114485-32114549)
chr8 (17-81)||(33289271-33289335)
chr8 (17-81)||(39571213-39571277)
chr8 (51-82)||(27293846-27293877)
chr8 (37-76)||(27775563-27775602)
chr8 (45-92)||(32211447-32211494)
chr8 (35-81)||(8587180-8587226)
chr8 (47-93)||(43199440-43199486)
chr8 (47-92)||(54698-54743)
chr8 (47-92)||(2890248-2890293)
chr8 (47-92)||(4245667-4245712)
chr8 (47-92)||(7785864-7785909)
chr8 (47-92)||(7805785-7805830)
chr8 (20-81)||(24691989-24692049)
chr8 (17-94)||(25600997-25601074)
chr8 (17-81)||(3304288-3304352)
chr8 (47-91)||(3304364-3304408)
chr8 (47-91)||(6552655-6552699)
chr8 (17-81)||(7012227-7012291)
chr8 (17-81)||(7805709-7805773)
chr8 (47-91)||(12343226-12343270)
chr8 (17-81)||(12763664-12763728)
chr8 (20-76)||(13578916-13578972)
chr8 (47-91)||(15888438-15888482)
chr8 (47-95)||(25601086-25601134)
chr8 (33-81)||(28463621-28463669)
chr8 (41-77)||(28999128-28999164)
chr8 (17-81)||(31654669-31654733)
chr8 (47-91)||(32114561-32114605)
chr8 (17-81)||(44498197-44498261)
chr8 (47-91)||(44498273-44498317)
[»] chr2 (36 HSPs)
chr2 (122-239)||(27259525-27259642)
chr2 (17-79)||(12170411-12170473)
chr2 (29-79)||(29866577-29866627)
chr2 (17-94)||(44398742-44398819)
chr2 (17-81)||(3055614-3055678)
chr2 (17-81)||(6648529-6648593)
chr2 (17-81)||(9047765-9047829)
chr2 (17-81)||(12337947-12338011)
chr2 (17-81)||(13197720-13197784)
chr2 (17-81)||(15372282-15372346)
chr2 (17-81)||(15896898-15896962)
chr2 (17-81)||(16243793-16243857)
chr2 (32-76)||(23227343-23227387)
chr2 (17-81)||(37990023-37990087)
chr2 (17-81)||(38917532-38917596)
chr2 (17-81)||(41478649-41478713)
chr2 (17-81)||(41492906-41492970)
chr2 (17-81)||(44397603-44397667)
chr2 (33-76)||(4553082-4553125)
chr2 (47-94)||(4684018-4684065)
chr2 (47-94)||(16243869-16243916)
chr2 (17-76)||(16734839-16734898)
chr2 (47-93)||(3055556-3055602)
chr2 (47-93)||(15896840-15896886)
chr2 (48-86)||(36688887-36688925)
chr2 (47-92)||(9047841-9047886)
chr2 (47-92)||(37990099-37990144)
chr2 (47-92)||(41478725-41478770)
chr2 (47-92)||(44397546-44397591)
chr2 (47-92)||(44398685-44398730)
chr2 (47-91)||(13197796-13197840)
chr2 (17-81)||(13344540-13344604)
chr2 (47-91)||(16044403-16044447)
chr2 (32-76)||(16561072-16561116)
chr2 (42-78)||(19274268-19274304)
chr2 (47-91)||(37666696-37666740)
[»] chr3 (35 HSPs)
chr3 (17-92)||(4238650-4238725)
chr3 (17-102)||(17653768-17653853)
chr3 (17-94)||(51406729-51406806)
chr3 (17-93)||(37508977-37509053)
chr3 (17-81)||(38964448-38964512)
chr3 (17-84)||(42170353-42170420)
chr3 (30-76)||(9213585-9213631)
chr3 (47-92)||(2787918-2787963)
chr3 (47-92)||(42170432-42170477)
chr3 (17-81)||(8817396-8817460)
chr3 (17-81)||(10298035-10298099)
chr3 (17-81)||(19557062-19557126)
chr3 (17-81)||(22721987-22722051)
chr3 (17-81)||(34080040-34080104)
chr3 (17-81)||(40691006-40691070)
chr3 (17-81)||(48340453-48340517)
chr3 (17-81)||(49823391-49823455)
chr3 (47-91)||(51406673-51406717)
chr3 (47-94)||(19557138-19557185)
chr3 (17-76)||(33942947-33943006)
chr3 (17-76)||(44785411-44785470)
chr3 (47-94)||(49823467-49823514)
chr3 (47-92)||(4238593-4238638)
chr3 (20-81)||(9111504-9111565)
chr3 (47-92)||(21295412-21295457)
chr3 (47-92)||(22721930-22721975)
chr3 (47-92)||(34080116-34080161)
chr3 (47-92)||(44785482-44785527)
chr3 (17-81)||(2787842-2787906)
chr3 (17-81)||(8437481-8437545)
chr3 (47-91)||(10297979-10298023)
chr3 (17-81)||(21295336-21295400)
chr3 (17-81)||(36095690-36095754)
chr3 (17-81)||(42507365-42507429)
chr3 (17-81)||(46208086-46208150)
[»] chr5 (20 HSPs)
chr5 (19-81)||(36595784-36595846)
chr5 (17-91)||(23359998-23360072)
chr5 (47-92)||(23359941-23359986)
chr5 (17-81)||(9395406-9395470)
chr5 (17-81)||(20848130-20848193)
chr5 (17-81)||(36563548-36563612)
chr5 (17-81)||(41989417-41989481)
chr5 (17-76)||(2366353-2366412)
chr5 (32-91)||(11574151-11574210)
chr5 (17-76)||(11795224-11795283)
chr5 (14-81)||(37642007-37642074)
chr5 (19-76)||(966206-966263)
chr5 (20-81)||(17025683-17025744)
chr5 (47-92)||(37149041-37149086)
chr5 (17-81)||(6126880-6126944)
chr5 (47-91)||(9395350-9395394)
chr5 (17-81)||(13103080-13103144)
chr5 (45-81)||(13539947-13539983)
chr5 (24-76)||(18167382-18167434)
chr5 (17-81)||(37148965-37149029)
[»] chr7 (29 HSPs)
chr7 (34-79)||(958505-958550)
chr7 (17-81)||(23314149-23314213)
chr7 (17-85)||(38063919-38063987)
chr7 (17-81)||(40840129-40840193)
chr7 (19-81)||(9575467-9575529)
chr7 (47-92)||(9268755-9268800)
chr7 (17-94)||(9268812-9268889)
chr7 (47-91)||(94404-94448)
chr7 (17-81)||(1738457-1738521)
chr7 (17-81)||(7240805-7240869)
chr7 (17-81)||(46840916-46840980)
chr7 (17-76)||(1565744-1565803)
chr7 (17-76)||(31319414-31319473)
chr7 (17-84)||(36016203-36016270)
chr7 (47-94)||(38063999-38064046)
chr7 (47-93)||(7482223-7482269)
chr7 (47-92)||(1565815-1565860)
chr7 (47-92)||(1738533-1738578)
chr7 (47-92)||(7240748-7240793)
chr7 (20-81)||(7482284-7482345)
chr7 (47-92)||(28536837-28536882)
chr7 (20-81)||(38441519-38441580)
chr7 (47-92)||(46840859-46840904)
chr7 (41-81)||(7269485-7269525)
chr7 (17-81)||(22285755-22285819)
chr7 (47-91)||(23314225-23314269)
chr7 (47-91)||(31319485-31319529)
chr7 (17-81)||(33418432-33418496)
chr7 (47-91)||(36583395-36583439)
[»] chr1 (38 HSPs)
chr1 (47-92)||(47588423-47588468)
chr1 (17-81)||(11989837-11989901)
chr1 (17-81)||(37552197-37552261)
chr1 (22-85)||(12213480-12213543)
chr1 (20-81)||(11897113-11897174)
chr1 (47-92)||(14984836-14984881)
chr1 (17-81)||(9981703-9981767)
chr1 (17-81)||(11795989-11796053)
chr1 (17-81)||(14984893-14984957)
chr1 (17-81)||(17556809-17556873)
chr1 (17-81)||(27159368-27159432)
chr1 (17-81)||(31842805-31842869)
chr1 (45-93)||(34042694-34042742)
chr1 (17-81)||(39401976-39402040)
chr1 (17-81)||(44668103-44668167)
chr1 (17-81)||(44955216-44955280)
chr1 (47-94)||(9981644-9981691)
chr1 (33-84)||(11989788-11989839)
chr1 (47-98)||(17556745-17556796)
chr1 (17-76)||(34042752-34042811)
chr1 (17-76)||(47216714-47216773)
chr1 (19-81)||(12483638-12483700)
chr1 (45-91)||(23278085-23278131)
chr1 (35-81)||(40676799-40676845)
chr1 (47-92)||(11795932-11795977)
chr1 (47-92)||(12483714-12483759)
chr1 (17-94)||(25694375-25694452)
chr1 (47-92)||(26471151-26471196)
chr1 (47-92)||(27159444-27159489)
chr1 (47-92)||(44668179-44668224)
chr1 (47-91)||(1050888-1050932)
chr1 (17-81)||(1050944-1051008)
chr1 (17-81)||(26471075-26471139)
chr1 (47-91)||(31842881-31842925)
chr1 (47-91)||(39402052-39402096)
chr1 (47-91)||(47216785-47216829)
chr1 (17-77)||(47588351-47588411)
chr1 (17-81)||(47777491-47777555)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-81)||(49561-49625)
scaffold0009 (47-92)||(49504-49549)
[»] scaffold1707 (1 HSPs)
scaffold1707 (17-76)||(1391-1450)
[»] scaffold0464 (2 HSPs)
scaffold0464 (14-81)||(6141-6208)
scaffold0464 (47-91)||(6217-6261)
[»] scaffold0415 (1 HSPs)
scaffold0415 (34-73)||(13799-13838)
[»] scaffold0482 (2 HSPs)
scaffold0482 (47-92)||(12859-12904)
scaffold0482 (17-81)||(12916-12980)
[»] scaffold0204 (2 HSPs)
scaffold0204 (47-92)||(23784-23829)
scaffold0204 (17-81)||(23841-23905)


Alignment Details
Target: chr6 (Bit Score: 114; Significance: 7e-58; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 3797643 - 3797760
Alignment:
Q  122 gatattagacatccattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgtt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3797643 gatattagacatccattgaagatagggaataaaatcaaggcgaatggggtagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgtt 3797742  T
Q  222 ttgtgtgtggggtgctag 239  Q
    ||||||||||||||||||    
T  3797743 ttgtgtgtggggtgctag 3797760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 3788078 - 3788197
Alignment:
Q  2 aaaatttgttggatgtggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatattaaaaat 101  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||| |||||||||||||||| |||  ||||||||||||||    
T  3788078 aaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtatattaaaaat 3788177  T
Q  102 tgtcaagacacactgagtca 121  Q
    ||||||||||||| ||||||    
T  3788178 tgtcaagacacaccgagtca 3788197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 35031075 - 35031011
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||||||||||||||| ||| |||||||||||||| ||||    
T  35031075 tggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggacc 35031011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 8417879 - 8417917
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagag 85  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  8417879 ttttgttgacctaaatttctcttataaataagaccagag 8417917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 6330171 - 6330248
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  6330171 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 6330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 11572219 - 11572142
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  11572219 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 11572142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 2830391 - 2830455
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  2830391 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 2830455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 8383043 - 8382979
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  8383043 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8382979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9644752 - 9644816
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9644752 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9644816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9650769 - 9650833
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9650769 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 13853667 - 13853603
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  13853667 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 13853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22896518 - 22896582
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| |||||||||| |||| |||||||||||||| ||||    
T  22896518 tggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggacc 22896582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 26602379 - 26602443
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  26602379 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 26602443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 2830379 - 2830332
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  2830379 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 2830332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 8099574 - 8099528
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  8099574 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 8099528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 11572231 - 11572277
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  11572231 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 11572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 8383055 - 8383100
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  8383055 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 8383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 33052880 - 33052925
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  33052880 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 33052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 6330159 - 6330115
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  6330159 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 8099586 - 8099650
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||| |||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  8099586 tggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 8417867 - 8417803
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||| |||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  8417867 tggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8417803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 14936529 - 14936581
Alignment:
Q  33 ccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagag 85  Q
    ||||||| ||||| | ||||||||| |||| ||||||||||||| ||||||||    
T  14936529 ccaaatacatcaactattgttgacccaaatatctcttataaataggaccagag 14936581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 17498677 - 17498641
Alignment:
Q  36 aatatatcaatttttgttgaccaaaatttctcttata 72  Q
    |||| |||||||||||||||||||| |||||||||||    
T  17498677 aataaatcaatttttgttgaccaaactttctcttata 17498641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 17992044 - 17992108
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||| |||||| ||||| | ||| ||| ||||||||||||| ||| |||||||||||||| ||||    
T  17992044 tggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggacc 17992108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 26602367 - 26602323
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  26602367 ttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 33052868 - 33052804
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| |||| |||||| ||| |||||||||||||| ||||    
T  33052868 tggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggacc 33052804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 51264063 - 51263946
Alignment:
Q  122 gatattagacatccattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgtt 221  Q
    ||||| ||||| ||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  51264063 gatatcagacaaccactgaagatagggaagaagatcaaggcgaatgagggagaatggtgtgtggtgaatttcaagtatgagaagttaggaaccttttgtt 51263964  T
Q  222 ttgtgtgtggggtgctag 239  Q
    ||||||||||||||||||    
T  51263963 ttgtgtgtggggtgctag 51263946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 3904757 - 3904679
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatatt 95  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||| |||| |||  ||||||||    
T  3904757 tggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatatt 3904679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 5986932 - 5987007
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||| |||| |||| |||||    
T  5986932 tggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtat 5987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3993032 - 3993109
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||||||| |||  |||||||    
T  3993032 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtatat 3993109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 46797781 - 46797845
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||||||||| ||||||||||| ||| |||||||||||||| ||||    
T  46797781 tggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggacc 46797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 47838691 - 47838627
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  47838691 tggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 47838627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 51894656 - 51894592
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||||| ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  51894656 tggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggacc 51894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 6422541 - 6422584
Alignment:
Q  35 aaatatatcaatttttgttgaccaaaatttctcttataaataag 78  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  6422541 aaatatatcaatttttgttgacctaaatatctcttataaataag 6422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 6121967 - 6121903
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  6121967 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 20538760 - 20538696
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  20538760 tggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggacc 20538696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 40913263 - 40913199
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| |||||   ||||||||| ||||||||| | |||||||||||||||||| ||||    
T  40913263 tggactgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggacc 40913199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 41469840 - 41469776
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  41469840 tggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaataggacc 41469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 42797788 - 42797852
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  42797788 tggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggacc 42797852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 47833667 - 47833731
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  47833667 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 47833731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 26231621 - 26231574
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  26231621 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 26231574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 29845702 - 29845663
Alignment:
Q  34 caaatatatcaatttttgttgaccaaaatttctcttataa 73  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  29845702 caaatatattaatttttgttgacctaaatttctcttataa 29845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 33551245 - 33551198
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  33551245 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 33551198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 50430492 - 50430433
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||| |||||| ||||||| ||| ||||||||||||||||| |||| | |||||||||||    
T  50430492 tggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaata 50430433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 4780381 - 4780415
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||||||||||||||||||||||||| ||||    
T  4780381 ttttgttgaccaaaatttctcttataaataggacc 4780415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 53337426 - 53337504
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatatt 95  Q
    ||||||||||| ||||| | ||| ||||| |||| |||||| ||| |||||||||||||| |||| |||  ||||||||    
T  53337426 tggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatatt 53337504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 3372165 - 3372120
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  3372165 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 3372120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 3422119 - 3422180
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  3422119 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 3422180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 3993020 - 3992975
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  3993020 ttttgttgaccgaaatttctcttataaataggaccggaggtagtat 3992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 7579354 - 7579305
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatatta 96  Q
    ||||||| ||| |||||||||||||||||| |||| ||| ||||||||||    
T  7579354 ttttgttaacctaaatttctcttataaataggaccggaggtagtatatta 7579305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 17236862 - 17236919
Alignment:
Q  35 aaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||| ||||| ||||||||||| |||||| ||||||||||| |||| |||| |||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 44900139 - 44900090
Alignment:
Q  32 accaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||| ||||||||| |||||||||||| ||| ||||||||||||| ||||    
T  44900139 accagatatatcaacttttgttgaccagaatatctcttataaataggacc 44900090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 47833655 - 47833610
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  47833655 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 47833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 48336307 - 48336262
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  48336307 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 48336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 52756716 - 52756675
Alignment:
Q  50 tgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  52756716 tgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 1716351 - 1716311
Alignment:
Q  41 atcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  1716351 atcaacttttgttgaccaaattatctcttataaataagacc 1716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 3372177 - 3372241
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  3372177 tggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggacc 3372241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 20538772 - 20538816
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  20538772 ttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 21892219 - 21892259
Alignment:
Q  41 atcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  21892219 atcaatttttgttgacaaaaatatctctcataaataagacc 21892259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 24704414 - 24704370
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  24704414 ttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 33621852 - 33621916
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  33621852 tggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggacc 33621916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 41615750 - 41615686
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||| |||| ||||| ||||| ||||| ||||||||| | || ||||||||||||||| ||||    
T  41615750 tggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggacc 41615686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 43900605 - 43900669
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||| ||| ||| |||||||||||||| ||||    
T  43900605 tggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggacc 43900669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 48336319 - 48336383
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  48336319 tggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggacc 48336383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 52756731 - 52756795
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||| ||||||||| ||||    
T  52756731 tggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggacc 52756795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 53337414 - 53337370
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  53337414 ttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 43322454 - 43322339
Alignment:
Q  123 atattagacatccattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgttt 222  Q
    |||||| ||| ||||||||| ||||||| || ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  43322454 atattacacaaccattgaagttagggaa-aagatcaaggcgaatgggggagaatgatgtgtggtaaatttcaagtatgagaagttaggaaccttctgttt 43322356  T
Q  223 tgtgtgtggggtgctag 239  Q
    |||||||||||||||||    
T  43322355 tgtgtgtggggtgctag 43322339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 7122789 - 7122906
Alignment:
Q  122 gatattagacatccattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgtt 221  Q
    ||||| |||||  |||||||||||||||| || ||||| |||||||||||| |||||||| |||||||||||||||| |||| ||||| |||||||| ||    
T  7122789 gatatcagacagtcattgaagatagggaagaagatcaaagcgaatgggggataatggtgtttggtgaatttcaagtatgagaggttagaaaccttctatt 7122888  T
Q  222 ttgtgtgtggggtgctag 239  Q
    ||||||||||||||||||    
T  7122889 ttgtgtgtggggtgctag 7122906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 24601291 - 24601395
Alignment:
Q  135 cattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgttttgtgtgtggggt 234  Q
    ||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |  |||||| |||||||||||||||||    
T  24601291 cattgaagatagggaagtagatcaaggtgaatgggggagaatggtgtgtggtgaatttcaagtatgagaagtgaaaaaccttatgttttgtgtgtggggt 24601390  T
Q  235 gctag 239  Q
    |||||    
T  24601391 gctag 24601395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 33057662 - 33057714
Alignment:
Q  29 ttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  33057662 ttaaccagatacatcaatttttgttgaccaaactttctcttataaataagacc 33057714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 17006952 - 17007027
Alignment:
Q  2 aaaatttgttggatgtggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataa 77  Q
    |||| ||| ||||| |||||||||||||||| || ||| ||||| |||| ||||| ||||||||||||||||||||    
T  17006952 aaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaataa 17007027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 17570295 - 17570220
Alignment:
Q  2 aaaatttgttggatgtggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataa 77  Q
    |||| ||| ||||| |||||||||||||||| || ||| ||||| |||| ||||| ||||||||||||||||||||    
T  17570295 aaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaataa 17570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 12343214 - 12343150
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  12343214 tggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 12343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 27422246 - 27422310
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||||| ||| ||  ||||||||||||| |||||||||||||||||| ||||    
T  27422246 tggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggacc 27422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 32211437 - 32211373
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||||||||||||||| ||| |||||||||||||| ||||    
T  32211437 tggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggacc 32211373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 43199428 - 43199364
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  43199428 tggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 43199364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 2890236 - 2890158
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatatt 95  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  ||||||||    
T  2890236 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatatt 2890158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12763740 - 12763785
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  12763740 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 54686 - 54622
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  54686 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 54622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 6552711 - 6552775
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  6552711 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6552775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 7785852 - 7785788
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  7785852 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7785788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 32114549 - 32114485
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||||||||||||||| ||| || ||||||||||| ||||    
T  32114549 tggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggacc 32114485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 33289335 - 33289271
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  33289335 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 33289271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 39571277 - 39571213
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  39571277 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 39571213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 27293846 - 27293877
Alignment:
Q  51 gttgaccaaaatttctcttataaataagacca 82  Q
    ||||||||||||||||||||||||||||||||    
T  27293846 gttgaccaaaatttctcttataaataagacca 27293877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 27775602 - 27775563
Alignment:
Q  37 atatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  27775602 atatattaatttttgttgacaaaaatttctcttataaata 27775563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 32211447 - 32211494
Alignment:
Q  45 atttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  32211447 atttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 8587226 - 8587180
Alignment:
Q  35 aaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  8587226 aaatacatcaacttttgttgaccaaactttctcttataaataggacc 8587180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 43199440 - 43199486
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  43199440 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 43199486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 54698 - 54743
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  54698 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 54743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 2890248 - 2890293
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  2890248 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 2890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 4245667 - 4245712
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  4245667 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 4245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 7785864 - 7785909
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  7785864 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 7785909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 7805785 - 7805830
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  7805785 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 7805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 24692049 - 24691989
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||||||| ||| ||||| ||||    
T  24692049 actgaatt-ttaaccagatatatcaacttttgttgacccaaatttcttttaaaaataggacc 24691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 25601074 - 25600997
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| || || ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  25601074 tggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 25600997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 3304352 - 3304288
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  3304352 tggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggacc 3304288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 3304364 - 3304408
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  3304364 ttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 6552699 - 6552655
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  6552699 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 7012227 - 7012291
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||| | ||| |||||||||||||| ||||    
T  7012227 tggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggacc 7012291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 7805773 - 7805709
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||| ||||| ||| |||||||||||||| ||||    
T  7805773 tggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggacc 7805709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 12343226 - 12343270
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  12343226 ttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 12763728 - 12763664
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  12763728 tggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggacc 12763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 13578916 - 13578972
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  13578916 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 15888438 - 15888482
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  15888438 ttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 25601086 - 25601134
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatatt 95  Q
    ||||||||||| |||||||||||||||||| || | ||| |||||||||    
T  25601086 ttttgttgacctaaatttctcttataaataggatcggaggtagtatatt 25601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 28463669 - 28463621
Alignment:
Q  33 ccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||| ||||| ||||||||||| || ||||||||||||||| ||||    
T  28463669 ccaaatacatcaacttttgttgacccaactttctcttataaataggacc 28463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 28999128 - 28999164
Alignment:
Q  41 atcaatttttgttgaccaaaatttctcttataaataa 77  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  28999128 atcaatttttgttgaccaaactttcttttataaataa 28999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 31654669 - 31654733
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||| ||||||||| ||||    
T  31654669 tggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggacc 31654733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 32114561 - 32114605
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  32114561 ttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 44498261 - 44498197
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| |||| |||||| ||| |||||||||||||| ||||    
T  44498261 tggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggacc 44498197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 44498273 - 44498317
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  44498273 ttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 27259525 - 27259642
Alignment:
Q  122 gatattagacatccattgaagatagggaataaaatcaaggcgaatgggggagaatggtgtgtggtgaatttcaagtacgagaagttaggaaccttctgtt 221  Q
    ||||| |||||  |||||||||||||||| || || |||| ||||||||||||||||||  ||| |||||| ||||| ||||||||||||||||| ||||    
T  27259525 gatatcagacaaacattgaagatagggaagaagatgaaggtgaatgggggagaatggtgcatggcgaatttaaagtatgagaagttaggaaccttttgtt 27259624  T
Q  222 ttgtgtgtggggtgctag 239  Q
    ||||||||||||||||||    
T  27259625 ttgtgtgtggggtgctag 27259642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 12170473 - 12170411
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataaga 79  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  12170473 tggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaataaga 12170411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 29866577 - 29866627
Alignment:
Q  29 ttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataaga 79  Q
    |||||||||||||||||||| |||||||  | |||||||||||||||||||    
T  29866577 ttaaccaaatatatcaatttatgttgacgcagatttctcttataaataaga 29866627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 44398742 - 44398819
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  44398742 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 44398819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 3055614 - 3055678
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  3055614 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 3055678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 6648593 - 6648529
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  6648593 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6648529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 9047829 - 9047765
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9047829 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9047765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 12338011 - 12337947
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  12338011 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 12337947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 13197784 - 13197720
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  13197784 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 13197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 15372282 - 15372346
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  15372282 tggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggacc 15372346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 15896898 - 15896962
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  15896898 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 15896962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 16243857 - 16243793
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  16243857 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 16243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 23227343 - 23227387
Alignment:
Q  32 accaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||    
T  23227343 accaaatacatcaacttttgttgaccaaaatgtctcttataaata 23227387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 37990087 - 37990023
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  37990087 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 37990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 38917596 - 38917532
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  38917596 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 38917532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 41478713 - 41478649
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  41478713 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 41478649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 41492970 - 41492906
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||| ||||| ||||| | ||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  41492970 tggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggacc 41492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 44397603 - 44397667
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  44397603 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 44397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 4553082 - 4553125
Alignment:
Q  33 ccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||    
T  4553082 ccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 4684018 - 4684065
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  4684018 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 4684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 16243869 - 16243916
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||| ||||||||||| |||| ||||||||||||    
T  16243869 ttttgttgacctaaatttttcttataaataggaccggagatagtatat 16243916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 16734839 - 16734898
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||||||||| ||||| ||||||| ||  || |||||||||||||||    
T  16734839 tggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaata 16734898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 3055602 - 3055556
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  3055602 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 3055556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 15896886 - 15896840
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  15896886 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 15896840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 36688925 - 36688887
Alignment:
Q  48 tttgttgaccaaaatttctcttataaataagaccagaga 86  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  36688925 tttgttgaccaaactttctcttataaataggaccagaga 36688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 9047841 - 9047886
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    |||| |||||| |||||||||||||||||| |||| ||||||||||    
T  9047841 tttttttgacctaaatttctcttataaatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 37990099 - 37990144
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  37990099 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 37990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 41478725 - 41478770
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  41478725 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 41478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 44397591 - 44397546
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  44397591 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 44398730 - 44398685
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  44398730 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 13197796 - 13197840
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  13197796 ttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 13344540 - 13344604
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||| | ||| |||||||||||||| ||||    
T  13344540 tggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggacc 13344604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 16044403 - 16044447
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  16044403 ttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 16561072 - 16561116
Alignment:
Q  32 accaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||||||| |||||| |||||||| |||| |||||||||||||||    
T  16561072 accaaataaatcaatctttgttgatcaaactttctcttataaata 16561116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 19274304 - 19274268
Alignment:
Q  42 tcaatttttgttgaccaaaatttctcttataaataag 78  Q
    |||||||||||||||| |||| |||||||||||||||    
T  19274304 tcaatttttgttgacccaaatatctcttataaataag 19274268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 37666696 - 37666740
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  37666696 ttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 4238650 - 4238725
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  4238650 tggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 17653768 - 17653853
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatattaaaaatt 102  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| ||| |||||| |||| ||||    
T  17653768 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattttaataatt 17653853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 51406729 - 51406806
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||||||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  51406729 tggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatat 51406806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 37508977 - 37509053
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| ||| |||||||    
T  37508977 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtata 37509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 38964448 - 38964512
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  38964448 tggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 38964512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 42170420 - 42170353
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccaga 84  Q
    |||| |||||| ||||||| ||| ||||| ||||||||||| ||| |||||||||||||| |||||||    
T  42170420 tggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccaga 42170353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 9213585 - 9213631
Alignment:
Q  30 taaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||||    
T  9213585 taaccaaatacatcaatttttgttgacctaaatttctctaataaata 9213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 2787918 - 2787963
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||    
T  2787918 ttttgttgacctaaatttctcttataaataggaccggagatagtat 2787963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 42170432 - 42170477
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  42170432 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 42170477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 8817460 - 8817396
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  8817460 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8817396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 10298035 - 10298099
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  10298035 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 10298099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 19557126 - 19557062
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  19557126 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 19557062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22721987 - 22722051
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  22721987 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 22722051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 34080104 - 34080040
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  34080104 tggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggacc 34080040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 40691070 - 40691006
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  40691070 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 40691006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 48340453 - 48340517
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  48340453 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 48340517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 49823455 - 49823391
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  49823455 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 49823391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 51406717 - 51406673
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||    
T  51406717 ttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 19557138 - 19557185
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  19557138 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 19557185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 33943006 - 33942947
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| || |||||||||||||||    
T  33943006 tggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaata 33942947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 44785470 - 44785411
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  44785470 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 44785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 49823467 - 49823514
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  49823467 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 49823514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 4238638 - 4238593
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  4238638 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 4238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 9111565 - 9111504
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9111565 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 21295412 - 21295457
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  21295412 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 21295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 22721975 - 22721930
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  22721975 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 22721930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 34080116 - 34080161
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  34080116 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 34080161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 44785482 - 44785527
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  44785482 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 2787906 - 2787842
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||| ||||| ||| |||||||||||||| ||||    
T  2787906 tggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggacc 2787842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 8437481 - 8437545
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||  ||| |||||||||||||| ||||    
T  8437481 tggactgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggacc 8437545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 10298023 - 10297979
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  10298023 ttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 21295400 - 21295336
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  21295400 tggactgaatttttaattagatacatcaacttttgttgacctaaaattctcttataaataggacc 21295336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 36095754 - 36095690
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||| | ||| ||||||| |||||||||||    
T  36095754 tggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttgtaaataagacc 36095690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 42507429 - 42507365
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| | ||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  42507429 tggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 42507365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 46208086 - 46208150
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  46208086 tggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaataggacc 46208150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 36595846 - 36595784
Alignment:
Q  19 gactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||| |||| || ||| ||||||||||||||||| || ||||||||||||||||||||    
T  36595846 gactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagacc 36595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 23359998 - 23360072
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| ||| |||||    
T  23359998 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 23359986 - 23359941
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||    
T  23359986 ttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9395406 - 9395470
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9395406 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 20848130 - 20848193
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| |||||||||||||| |||||| |||||||||||||| ||||    
T  20848130 tggactgaatttttaactagatacatcaatttttgttgcccaaaa-ttctcttataaataggacc 20848193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 36563612 - 36563548
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  36563612 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 36563548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 41989481 - 41989417
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  41989481 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 41989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 2366412 - 2366353
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||| | ||||||||||| || || | ||||||||| ||||||||||||||||||    
T  2366412 tggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaata 2366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 11574151 - 11574210
Alignment:
Q  32 accaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    |||| |||| |||||||||||||||| |||| ||||||||||||| |||| |||| ||||    
T  11574151 accagatatttcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 11795224 - 11795283
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  11795224 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 11795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 37642007 - 37642074
Alignment:
Q  14 atgtggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||||||||| ||||| | ||| ||||| |||| |||||| ||| |||||||||||||| ||||    
T  37642007 atgtggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggacc 37642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 966206 - 966263
Alignment:
Q  19 gactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||| ||||||| ||| ||  ||||||||||| | ||||||||||||||||||    
T  966206 gactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaata 966263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 17025683 - 17025744
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  17025683 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 17025744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 37149041 - 37149086
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  37149041 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 37149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 6126880 - 6126944
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||| |||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  6126880 tggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 9395394 - 9395350
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  9395394 ttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 13103080 - 13103144
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  13103080 tggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 13103144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 13539947 - 13539983
Alignment:
Q  45 atttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  13539947 atttttgttgacctaaatttctcttataaataggacc 13539983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 18167382 - 18167434
Alignment:
Q  24 aattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    |||| |||| ||||||  ||||||||||||||||||| ||| |||||||||||    
T  18167382 aatttttaatcaaatacgtcaatttttgttgaccaaactttttcttataaata 18167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 37149029 - 37148965
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||| ||||||||| ||||    
T  37149029 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggacc 37148965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 958505 - 958550
Alignment:
Q  34 caaatatatcaatttttgttgaccaaaatttctcttataaataaga 79  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  958505 caaatatatcaatttttgttgacctaaatatctcttataaataaga 958550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 23314213 - 23314149
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||||||||| ||||||||||| ||| |||||||||||||| ||||    
T  23314213 tggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggacc 23314149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 38063987 - 38063919
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagag 85  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||||||    
T  38063987 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccagag 38063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 40840193 - 40840129
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| || || ||||| |||||||||| ||||||||||||||||||| ||||    
T  40840193 tggactgaatttttaactaagtacatcaacttttgttgacaaaaatttctcttataaataggacc 40840129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 9575467 - 9575529
Alignment:
Q  19 gactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||| ||||| | ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  9575467 gactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggacc 9575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 9268800 - 9268755
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||    
T  9268800 ttttgttgacctaaatttctcttataaataggaccagaggtagtat 9268755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 9268812 - 9268889
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  9268812 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 9268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 94404 - 94448
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||    
T  94404 ttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 1738521 - 1738457
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  1738521 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 1738457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 7240805 - 7240869
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  7240805 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7240869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 46840916 - 46840980
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  46840916 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 46840980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 1565803 - 1565744
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  1565803 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 31319473 - 31319414
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  31319473 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 31319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 36016270 - 36016203
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccaga 84  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| |||||||    
T  36016270 tggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccaga 36016203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 38063999 - 38064046
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  38063999 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 38064046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 7482269 - 7482223
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  7482269 ttttgttgacctaaatttctcttataaataggaccggaggtagtata 7482223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 1565815 - 1565860
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  1565815 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 1565860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 1738533 - 1738578
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  1738533 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 1738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 7240793 - 7240748
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  7240793 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 7240748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 7482284 - 7482345
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  7482284 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7482345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 28536837 - 28536882
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  28536837 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 38441519 - 38441580
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  38441519 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 38441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 46840904 - 46840859
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  46840904 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 46840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 7269485 - 7269525
Alignment:
Q  41 atcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||||||||| || ||| ||||||||||||||||    
T  7269485 atcaatttttgttgacccaactttttcttataaataagacc 7269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22285755 - 22285819
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  22285755 tggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 22285819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 23314225 - 23314269
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  23314225 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 31319485 - 31319529
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  31319485 ttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 33418432 - 33418496
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  33418432 tggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 33418496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 36583439 - 36583395
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  36583439 ttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 47588423 - 47588468
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  47588423 ttttgttgacctaaatttctcttataaataagaccagaggtagtat 47588468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 11989837 - 11989901
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||||||||| |||||||||| |||||  |||||||| ||||||||| ||||    
T  11989837 tggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaataggacc 11989901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 37552197 - 37552261
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||||| ||| ||  ||||||||||||| |||||||||||||||||| ||||    
T  37552197 tggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggacc 37552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 12213543 - 12213480
Alignment:
Q  22 tgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagag 85  Q
    |||||| ||||| ||||| ||||||||||||||||| || ||||||| ||||||| ||||||||    
T  12213543 tgaatttttaactaaataaatcaatttttgttgacccaagtttctctaataaataggaccagag 12213480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 11897113 - 11897174
Alignment:
Q  20 actgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||| ||||||  ||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  11897113 actgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggacc 11897174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 14984881 - 14984836
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||    
T  14984881 ttttgttgacctaaatttctcttataaataggaccggagatagtat 14984836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9981703 - 9981767
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  9981703 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9981767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 11795989 - 11796053
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  11795989 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 11796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 14984893 - 14984957
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  14984893 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 14984957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 17556809 - 17556873
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| || ||||||||||||||| ||||    
T  17556809 tggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggacc 17556873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27159432 - 27159368
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  27159432 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 27159368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 31842869 - 31842805
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  31842869 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 31842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 34042742 - 34042694
Alignment:
Q  45 atttttgttgaccaaaatttctcttataaataagaccagagatagtata 93  Q
    ||||||||||||| |||||||||||||||||| |||| ||| |||||||    
T  34042742 atttttgttgacctaaatttctcttataaataggaccggaggtagtata 34042694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 39402040 - 39401976
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  39402040 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 39401976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 44668167 - 44668103
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  44668167 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 44668103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 44955280 - 44955216
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  44955280 tggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggacc 44955216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 9981691 - 9981644
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  9981691 ttttgttgacctaaatttctcttataaataggaccggaggtagtatat 9981644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 11989839 - 11989788
Alignment:
Q  33 ccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccaga 84  Q
    |||||||||| | |||||||||||| || |||||||||||||||||| ||||    
T  11989839 ccaaatatattagtttttgttgacccaactttctcttataaataagatcaga 11989788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 17556796 - 17556745
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtatattaaa 98  Q
    ||||||||||| || ||||||||||||||| ||||||||  |||||||||||    
T  17556796 ttttgttgacctaactttctcttataaataggaccagagggagtatattaaa 17556745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 34042752 - 34042811
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  34042752 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 34042811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 47216773 - 47216714
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  47216773 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 47216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12483700 - 12483638
Alignment:
Q  19 gactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||| | ||| ||||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  12483700 gactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggacc 12483638  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 23278085 - 23278131
Alignment:
Q  45 atttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||||| |||||||||||||||||| |||| ||| |||||    
T  23278085 atttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 40676845 - 40676799
Alignment:
Q  35 aaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||||||    
T  40676845 aaatacatccatttttgttgaccaaaatgtttcttataaataagacc 40676799  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 11795977 - 11795932
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  11795977 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 11795932  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12483714 - 12483759
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  12483714 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 12483759  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 25694375 - 25694452
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagaccagagatagtatat 94  Q
    |||| |||||| ||||| | ||| ||||| ||||||||||| ||| |||||||||||||| |||| |||  |||||||    
T  25694375 tggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 25694452  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 26471151 - 26471196
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  26471151 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 26471196  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 27159444 - 27159489
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  27159444 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 27159489  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 44668179 - 44668224
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  44668179 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44668224  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 1050932 - 1050888
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  1050932 ttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 1050944 - 1051008
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||| ||||||| ||| |||||||||||||| ||||    
T  1050944 tggactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggacc 1051008  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 26471139 - 26471075
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||| | ||| |||||||||||||| ||||    
T  26471139 tggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggacc 26471075  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 31842881 - 31842925
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  31842881 ttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 39402052 - 39402096
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  39402052 ttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 47216785 - 47216829
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  47216785 ttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 47588411 - 47588351
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataa 77  Q
    ||||||||||| ||||  | ||| ||||| ||||||||||| ||| |||||||||||||||    
T  47588411 tggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataa 47588351  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 47777555 - 47777491
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| | ||| | ||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  47777555 tggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 47777491  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 49561 - 49625
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||| ||||    
T  49561 tggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggacc 49625  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 49549 - 49504
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  49549 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 49504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1391 - 1450
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaata 76  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| ||||||||||||||    
T  1391 tggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1450  T

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Target: scaffold0464 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 6208 - 6141
Alignment:
Q  14 atgtggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    |||||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  6208 atgtggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggacc 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 6217 - 6261
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagta 91  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||||    
T  6217 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 13799 - 13838
Alignment:
Q  34 caaatatatcaatttttgttgaccaaaatttctcttataa 73  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  13799 caaatatattaatttttgttgacctaaatttctcttataa 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 12904 - 12859
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  12904 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 12916 - 12980
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||| ||||| ||| |||||||||||||| ||||    
T  12916 tggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggacc 12980  T

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Target: scaffold0204 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 23829 - 23784
Alignment:
Q  47 ttttgttgaccaaaatttctcttataaataagaccagagatagtat 92  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||||    
T  23829 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 23784  T

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Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 23841 - 23905
Alignment:
Q  17 tggactgaattgttaaccaaatatatcaatttttgttgaccaaaatttctcttataaataagacc 81  Q
    ||||||||||| ||||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||    
T  23841 tggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggacc 23905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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