View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3743_low_46 (Length: 242)
Name: NF3743_low_46
Description: NF3743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3743_low_46 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 43868293 - 43868526
Alignment:
| Q |
1 |
aatgtgtgacttggatagtttctgtgagtttgatgttgatcttgctgaatttgcagctaatgttgaaagtttacttggtgttgggagtagtgagattcaa |
100 |
Q |
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| T |
43868293 |
aatgtgtgacttggatagtttctgtgagtttgatgttgatcttgctgaatttgcagctaatgttgaaagtttacttggtgttgggagtagtgagattcaa |
43868392 |
T |
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| Q |
101 |
gagaattcatcaggacaagtgtttgattataaacaagagaatgaaatggatgcatccaaaaatgaaatgttaaaggttaaggatgaagaacttgatgatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
43868393 |
gagaattcatcaggacaagtgtttgattataaacaagagaatgaaatggatgcatccaaaagtgaaatgttaaaggttaaggatgaagaacttgatgatt |
43868492 |
T |
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| Q |
201 |
tggaatcagtttttgacatgacaagtgatgatgt |
234 |
Q |
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| T |
43868493 |
tggaatcagtttttgacatgacaagtgatgatgt |
43868526 |
T |
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