View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3749_high_5 (Length: 454)

Name: NF3749_high_5
Description: NF3749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3749_high_5
NF3749_high_5
[»] scaffold0110 (3 HSPs)
scaffold0110 (19-439)||(29632-30052)
scaffold0110 (19-433)||(12771-13189)
scaffold0110 (19-433)||(20508-20926)
[»] chr4 (17 HSPs)
chr4 (203-279)||(23719308-23719385)
chr4 (203-252)||(17534346-17534396)
chr4 (199-279)||(22638068-22638149)
chr4 (203-279)||(36157281-36157358)
chr4 (203-279)||(44801792-44801869)
chr4 (203-254)||(32319551-32319603)
chr4 (229-279)||(10062549-10062599)
chr4 (203-252)||(27579272-27579322)
chr4 (203-279)||(8459521-8459598)
chr4 (203-267)||(12759770-12759835)
chr4 (203-279)||(12886452-12886529)
chr4 (199-279)||(22529694-22529775)
chr4 (203-279)||(26629463-26629540)
chr4 (203-279)||(49487804-49487881)
chr4 (203-279)||(54682951-54683028)
chr4 (344-384)||(31639068-31639108)
chr4 (227-267)||(41376482-41376522)
[»] chr1 (10 HSPs)
chr1 (203-279)||(12857641-12857718)
chr1 (203-279)||(15608853-15608930)
chr1 (203-279)||(31730549-31730626)
chr1 (203-252)||(7065060-7065110)
chr1 (229-279)||(14091014-14091064)
chr1 (203-252)||(46136820-46136870)
chr1 (203-279)||(21091559-21091636)
chr1 (203-279)||(43684729-43684806)
chr1 (203-254)||(43741176-43741228)
chr1 (198-254)||(51549668-51549724)
[»] chr2 (12 HSPs)
chr2 (203-278)||(11723564-11723640)
chr2 (203-278)||(25900803-25900878)
chr2 (203-259)||(8846779-8846836)
chr2 (203-254)||(18479655-18479706)
chr2 (203-273)||(25903566-25903637)
chr2 (203-252)||(20892619-20892669)
chr2 (203-252)||(10300403-10300452)
chr2 (203-279)||(13500016-13500093)
chr2 (203-279)||(21099732-21099809)
chr2 (203-279)||(45194556-45194633)
chr2 (227-279)||(1598709-1598761)
chr2 (227-279)||(8846931-8846983)
[»] chr7 (16 HSPs)
chr7 (203-279)||(40081837-40081914)
chr7 (203-252)||(31857656-31857706)
chr7 (203-279)||(40934472-40934549)
chr7 (227-279)||(25513562-25513614)
chr7 (203-252)||(2285535-2285585)
chr7 (203-252)||(27689377-27689427)
chr7 (229-279)||(41506519-41506569)
chr7 (203-279)||(8238664-8238741)
chr7 (204-252)||(28387647-28387696)
chr7 (203-279)||(33253611-33253688)
chr7 (203-279)||(41541849-41541926)
chr7 (230-279)||(43073069-43073118)
chr7 (230-279)||(45150695-45150744)
chr7 (227-279)||(24838094-24838146)
chr7 (204-279)||(30071843-30071919)
chr7 (227-267)||(44157972-44158012)
[»] chr3 (15 HSPs)
chr3 (203-279)||(54767812-54767889)
chr3 (204-279)||(45953944-45954020)
chr3 (203-279)||(34785083-34785160)
chr3 (203-279)||(46175612-46175689)
chr3 (227-279)||(40593640-40593692)
chr3 (203-279)||(48128652-48128728)
chr3 (203-252)||(11194778-11194828)
chr3 (198-279)||(16852496-16852578)
chr3 (203-252)||(17605147-17605197)
chr3 (203-252)||(34784676-34784726)
chr3 (203-279)||(31270993-31271070)
chr3 (203-279)||(46799370-46799447)
chr3 (227-279)||(170938-170990)
chr3 (227-279)||(31798105-31798157)
chr3 (203-247)||(42541331-42541374)
[»] scaffold0076 (1 HSPs)
scaffold0076 (230-279)||(16326-16375)
[»] scaffold0045 (1 HSPs)
scaffold0045 (203-279)||(22002-22079)
[»] chr8 (6 HSPs)
chr8 (203-279)||(4018159-4018236)
chr8 (203-279)||(28237317-28237394)
chr8 (202-279)||(32222684-32222762)
chr8 (203-252)||(34214686-34214736)
chr8 (203-279)||(4718156-4718233)
chr8 (203-279)||(35065542-35065619)
[»] chr6 (6 HSPs)
chr6 (203-279)||(29681630-29681707)
chr6 (211-279)||(32603300-32603369)
chr6 (203-275)||(7466444-7466518)
chr6 (203-276)||(12693328-12693402)
chr6 (203-275)||(31842491-31842564)
chr6 (203-279)||(32132010-32132086)
[»] chr5 (9 HSPs)
chr5 (203-267)||(30187764-30187829)
chr5 (203-274)||(32701735-32701807)
chr5 (203-254)||(34578355-34578407)
chr5 (203-252)||(24802239-24802289)
chr5 (203-279)||(6042716-6042793)
chr5 (203-267)||(7401206-7401271)
chr5 (203-254)||(10737789-10737841)
chr5 (227-267)||(28770775-28770815)
chr5 (227-267)||(31163327-31163367)
[»] scaffold0115 (1 HSPs)
scaffold0115 (203-279)||(42880-42957)


Alignment Details
Target: scaffold0110 (Bit Score: 389; Significance: 0; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 19 - 439
Target Start/End: Original strand, 29632 - 30052
Alignment:
Q  19 gaaatactaacatagttttggaaatgtaatgttaattttaatcgcttgttgtgattttgttccttaaaccgttgcaggcattactccttacgcaaatctc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29632 gaaatactaacatagttttggaaatgtaatgttaattttaatcgctcgttgtgtttttgttccttaaaccgttgcaggcattactccttacgcaaatctc 29731  T
Q  119 taccattatgaccttcctttagctcttgagttgaaatacaacggtttattgagccataatgttgtgtaagtacttacatagacaaaaaatgctgatagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  29732 taccattatgaccttcctttagctcttgagttgaaatacaacggtttattgagccgtaatgttgtgtaagtacttacatagacaaaaaatgttgatagaa 29831  T
Q  219 aattttacgggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaatcatcaatgttttaaaattggacaggaaagattttgcgga 318  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29832 aattttacgggactaaaaaatgtgattttattttatctggactaaaaacgaaattctgaatgatcaatgttttaaaattggacagaaaagattttgcgga 29931  T
Q  319 ttatgcagatttttgttttaagacatttggagacagagttaagaattggatgaccttcaatgaaccaagagttgttgctgcacttggttatgataatggc 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29932 ttatgcagatttttgttttaagacatttggagacagagttaagaattggatgaccttcaatgaaccaagagttgttgctgcacttggttatgataatggc 30031  T
Q  419 ttttttgcccctggatgatgt 439  Q
    ||||||||||||||| |||||    
T  30032 ttttttgcccctggaagatgt 30052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 19 - 433
Target Start/End: Original strand, 12771 - 13189
Alignment:
Q  19 gaaatactaacatagttttggaaatgtaatgttaatt-ttaatcgcttgttgtgattttgttccttaaacc---gttgcaggcattactccttacgcaaa 114  Q
    |||||| ||||||||||| |||||||||||||||| | |||||  ||| ||||| ||||||||||||||||   |||||||||||||||||||| |||||    
T  12771 gaaatagtaacatagtttaggaaatgtaatgttaaatattaatttcttattgtgtttttgttccttaaacctatgttgcaggcattactccttatgcaaa 12870  T
Q  115 tctctaccattatgaccttcctttagctcttgagttgaaatacaacggtttattgagccataatgttgtgtaagtacttacatagacaaaaaatgctgat 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||| ||| ||||| | ||||    
T  12871 tctctaccattatgaccttcctctagctcttgagttgaaatacaacggtttattaaaccgtaatgttgtgtaagtacttacatcgactaaaaacgttgat 12970  T
Q  215 agaaaattttacgggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaatcatcaatgttttaaaattggacaggaaagattttg 314  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  12971 agaaaattttacaggactaaaaaatgtgattttattttatatggactaaaaacgaaattctgaatgctcaatgttttaaaattggataggaaagattttg 13070  T
Q  315 cggattatgcagatttttgttttaagacatttggagacagagttaagaattggatgaccttcaatgaaccaagagttgttgctgcacttggttatgataa 414  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||     
T  13071 cggattatgcagatttttgtttcaaaacatttggagacagagttaagaactggatgactttcaatgaaccaagagttattgctgcacttggttatgatac 13170  T
Q  415 tggcttttttgcccctgga 433  Q
    |||||||||||||||||||    
T  13171 tggcttttttgcccctgga 13189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 19 - 433
Target Start/End: Original strand, 20508 - 20926
Alignment:
Q  19 gaaatactaacatagttttggaaatgtaatgttaatt-ttaatcgcttgttgtgattttgttccttaaacc---gttgcaggcattactccttacgcaaa 114  Q
    |||||| ||||||||||| |||||||||||||||| | |||||  ||| ||||| ||||||||||||||||   |||||||||||||||||||| |||||    
T  20508 gaaatagtaacatagtttaggaaatgtaatgttaaatattaatttcttattgtgtttttgttccttaaacctatgttgcaggcattactccttatgcaaa 20607  T
Q  115 tctctaccattatgaccttcctttagctcttgagttgaaatacaacggtttattgagccataatgttgtgtaagtacttacatagacaaaaaatgctgat 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||| ||| ||||| | ||||    
T  20608 tctctaccattatgaccttcctctagctcttgagttgaaatacaacggtttattaaaccgtaatgttgtgtaagtacttacatcgactaaaaacgttgat 20707  T
Q  215 agaaaattttacgggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaatcatcaatgttttaaaattggacaggaaagattttg 314  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  20708 agaaaattttacaggactaaaaaatgtgattttattttatatggactaaaaacgaaattctgaatgctcaatgttttaaaattggataggaaagattttg 20807  T
Q  315 cggattatgcagatttttgttttaagacatttggagacagagttaagaattggatgaccttcaatgaaccaagagttgttgctgcacttggttatgataa 414  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||     
T  20808 cggattatgcagatttttgtttcaaaacatttggagacagagttaagaactggatgactttcaatgaaccaagagttattgctgcacttggttatgatac 20907  T
Q  415 tggcttttttgcccctgga 433  Q
    |||||||||||||||||||    
T  20908 tggcttttttgcccctgga 20926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 23719308 - 23719385
Alignment:
Q  203 aaaaatgctgatagaaaattttacgg-gactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||  |||||| |||| |||||| ||||    
T  23719308 aaaaatgctgatagaaaattttatagagactaaaaaatgtgattttattttatagggactaaaaacaaaattcagaat 23719385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 17534346 - 17534396
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  17534346 aaaaatgctgatggaaaattttatagggactaaaaaatgtgattttatttt 17534396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 22638149 - 22638068
Alignment:
Q  199 gacaaaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| |||| ||||||||||  ||||||||||| |||||||||||||| |  ||| || |||| |||||||||||    
T  22638149 gacaaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagggattaaaaacaaaattctgaat 22638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 36157358 - 36157281
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||||| |||||||||||| |  |||||| |||| |||||||||||    
T  36157358 aaaaatgttgatggaaaattttatagggactaaaaaatatgattttattttgtagggactaaaaacaaaattctgaat 36157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 44801869 - 44801792
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| | ||||||||  ||||||||||||| |||||||||||| |  |||||| |||| |||||||||||    
T  44801869 aaaaatgctgatgggaaattttatagggactaaaaaatatgattttattttgtagggactaaaaacaaaattctgaat 44801792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 32319603 - 32319551
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttat 254  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||||||    
T  32319603 aaaaatgctgacagaaaattttatagggactaaaaagtgtgattttattttat 32319551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 10062599 - 10062549
Alignment:
Q  229 gactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||||||||||||||||||  |||||| |||| ||||| |||||    
T  10062599 gactaaaaaatgtgattttattttataaggactaaaaacaaaattgtgaat 10062549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 27579322 - 27579272
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  27579322 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 27579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 8459521 - 8459598
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| |||||| |||  ||||||||||| |||||||||||||| |  ||| || |||| |||||||||||    
T  8459521 aaaaatgctgatggaaaatcttatagggactaaaaagtgtgattttattttgtagggattaaaaacaaaattctgaat 8459598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 12759770 - 12759835
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    |||||||||||| ||||||||||   |||||||||| ||||||||||||||||  |||||| ||||    
T  12759770 aaaaatgctgatggaaaattttatatggactaaaaagtgtgattttattttattgggactaaaaac 12759835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 12886529 - 12886452
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||||  |||||||||  |||||||||||||  ||||||||||| |  |||||| |||| |||||||||||    
T  12886529 aaaaatgctgatgaaaaattttatagggactaaaaaatacgattttattttgtagggactaaaaacaaaattctgaat 12886452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 22529694 - 22529775
Alignment:
Q  199 gacaaaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||||||||  ||| |||||  ||||| ||||| |||||||||||||||   |||||| |||| |||||||||||    
T  22529694 gacaaaaaatgctgatgaaaatttttatagggaccaaaaagtgtgattttattttacaaggactaaaaacaaaattctgaat 22529775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 26629540 - 26629463
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||  |||||||| || ||||||||||| |||||||||||||| |  |||||| ||| |||||| |||||    
T  26629540 aaaaatgctgacggaaaatttcacagggactaaaaagtgtgattttattttgtagggactaaaaatgaaattttgaat 26629463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 49487881 - 49487804
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   ||||||||||||||||||||||||| |  |||||| || | |||||||||||    
T  49487881 aaaaatgttgatggaaaattttataaggactaaaaaatgtgattttattttgtagggactaaaagcaaaattctgaat 49487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 54683028 - 54682951
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| | ||| |||||||||  ||||||||||| ||| ||||||||||||  |||||| |||| |||||||||||    
T  54683028 aaaaatgttaataaaaaattttatagggactaaaaagtgtaattttattttattgggactaaaaactaaattctgaat 54682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 31639068 - 31639108
Alignment:
Q  344 tttggagacagagttaagaattggatgaccttcaatgaacc 384  Q
    |||||||||||||||||| | ||||| ||||||||||||||    
T  31639068 tttggagacagagttaagcactggattaccttcaatgaacc 31639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 41376482 - 41376522
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    |||||||||||||||||||||||||| | ||||||| ||||    
T  41376482 gggactaaaaaatgtgattttattttgtatggactaaaaac 41376522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 12857718 - 12857641
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  ||||||||||| |||||||||||||| | ||||||| |||| |||||||||||    
T  12857718 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgtatggactaaaaacaaaattctgaat 12857641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 15608853 - 15608930
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||| |  |||||| |||  |||||||||||    
T  15608853 aaaaatgctgatagaaaattttatagggactaaaaagtgtgattttattttgtagggactaaaaataaaattctgaat 15608930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 31730626 - 31730549
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  31730626 aaaaatgttgatggaaaattttatagggactaaaaattgtgattttattttgtagggactaaaaacaaaattctgaat 31730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 7065110 - 7065060
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  7065110 aaaaatgctgatggaaaattttatagggactaaaaactgtgattttatttt 7065060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 14091064 - 14091014
Alignment:
Q  229 gactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  14091064 gactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 14091014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 46136820 - 46136870
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  46136820 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 46136870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 21091559 - 21091636
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   ||| |||||| |||||||||||||| | ||||||| |||| |||||||||||    
T  21091559 aaaaatgttgatggaaaattttaaatggattaaaaagtgtgattttattttgtatggactaaaaacaaaattctgaat 21091636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 43684806 - 43684729
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||| |  |||||||||  ||||||||||| ||||||||||||||||  |||||| |||| ||||| |||||    
T  43684806 aaaaatgctgctgaaaaattttatagggactaaaaagtgtgattttattttatagggactaaaaacaaaattgtgaat 43684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 43741228 - 43741176
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttat 254  Q
    ||||||||||||  ||| |||||| ||||||||||| ||||||||||||||||    
T  43741228 aaaaatgctgatgaaaatttttacagggactaaaaagtgtgattttattttat 43741176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 51549724 - 51549668
Alignment:
Q  198 agacaaaaaatgctgatagaaaattttacgggactaaaaaatgtgattttattttat 254  Q
    |||| ||||||||||||  ||| ||||| ||| ||||||| ||||||||||||||||    
T  51549724 agactaaaaatgctgatgaaaatttttatggggctaaaaagtgtgattttattttat 51549668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 11723564 - 11723640
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaa 278  Q
    ||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||  |||||| |||| ||||||||||    
T  11723564 aaaaatgttgatggaaaattttacagggactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaa 11723640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 25900878 - 25900803
Alignment:
Q  203 aaaaatgctgatagaaaattttacgggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaa 278  Q
    ||||||| |||| ||||||||||  |||||||||| | ||||||||||||||  |||||| |||| ||||||||||    
T  25900878 aaaaatgttgatggaaaattttataggactaaaaagtatgattttattttatagggactaaaaacaaaattctgaa 25900803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 8846836 - 8846779
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctgga 259  Q
    ||||||||| || ||||||||||  |||||||||||||||||||||||||||| ||||    
T  8846836 aaaaatgctaatggaaaattttatagggactaaaaaatgtgattttattttatatgga 8846779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 18479655 - 18479706
Alignment:
Q  203 aaaaatgctgatagaaaattttacgggactaaaaaatgtgattttattttat 254  Q
    |||| ||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  18479655 aaaagtgctgatggaaaattttataggactaaaaaatttgattttattttat 18479706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 25903566 - 25903637
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaatt 273  Q
    ||||||| |||| ||||||||||  |||| |||||||||||||||||||||||  |||||| |||| |||||    
T  25903566 aaaaatgttgatggaaaattttatagggattaaaaaatgtgattttattttatagggactaaaaacaaaatt 25903637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 20892669 - 20892619
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||||||||||    
T  20892669 aaaaatgttgatggaaaattttatagggactaaaaaatgtgattttatttt 20892619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 10300452 - 10300403
Alignment:
Q  203 aaaaatgctgatagaaaattttacgggactaaaaaatgtgattttatttt 252  Q
    |||||| || || |||||||||||  ||||||||||||||||||||||||    
T  10300452 aaaaatactaatggaaaattttacaagactaaaaaatgtgattttatttt 10300403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 13500016 - 13500093
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||| || | |||||| |||||||||||||| |  |||||| | || |||||||||||    
T  13500016 aaaaatgctgatggaaaattttacaggaattaaaaagtgtgattttattttgtagggactaaatacaaaattctgaat 13500093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 21099809 - 21099732
Alignment:
Q  203 aaaaatgctgatagaaaattttacggga-ctaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| |||| |||||  ||| |||||||||||||||||||||| |  |||||| |||| ||||| |||||    
T  21099809 aaaaatgctgatggaaatttttataggaactaaaaaatgtgattttattttgtagggactaaaaacaaaattgtgaat 21099732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 45194633 - 45194556
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   ||| |||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  45194633 aaaaatgttgatggaaaattttataaggattaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 45194556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 1598761 - 1598709
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  1598761 gggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 1598709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 8846931 - 8846983
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||| |||||    
T  8846931 gggactaaaaagtgtgattttattttatagggactaaaaacaaaattgtgaat 8846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 40081837 - 40081914
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||| |  |||||| |||  |||||||||||    
T  40081837 aaaaatgctgatggaaaattttatagggactaaaaaatgtgattttattttgtagggactaaaaataaaattctgaat 40081914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 31857656 - 31857706
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  31857656 aaaaatgttgatagaaaattttatagggactaaaaaatgtgattttatttt 31857706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 40934549 - 40934472
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| ||||||||||||||||  |||||| |||  |||||||||||    
T  40934549 aaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttatagggactaaaaataaaattctgaat 40934472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 25513562 - 25513614
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  25513562 gggactaaaaagtgtgattttattttatggggactaaaaacaaaattctgaat 25513614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 2285535 - 2285585
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  2285535 aaaaatgctgatggaaaattttatagggactaaaaattgtgattttatttt 2285585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 27689427 - 27689377
Alignment:
Q  203 aaaaatgctgatagaaaattttacggga-ctaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||||    
T  27689427 aaaaatgctgatggaaaattttataggaactaaaaaatgtgattttatttt 27689377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 41506519 - 41506569
Alignment:
Q  229 gactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  41506519 gactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 41506569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 8238741 - 8238664
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| ||||||||||||||||  |||| | |||| ||||| |||||    
T  8238741 aaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttataaggacgaaaaacaaaattgtgaat 8238664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 28387696 - 28387647
Alignment:
Q  204 aaaatgctgatagaaaattttacgg-gactaaaaaatgtgattttatttt 252  Q
    ||||||||||| ||||||||||  | ||||||||||||||||||||||||    
T  28387696 aaaatgctgatggaaaattttatagagactaaaaaatgtgattttatttt 28387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 33253688 - 33253611
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||||||| |||||||||| |  |||||| |||  |||||||||||    
T  33253688 aaaaatgttgatggaaaattttatagggactaaaaaatgtaattttattttgtagggactaaaaataaaattctgaat 33253611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 41541849 - 41541926
Alignment:
Q  203 aaaaatgctgatagaaaattttacgg-gactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  | ||||||||||| |||||||||||| | ||||||| |||  |||||||||||    
T  41541849 aaaaatgttgatggaaaattttatagagactaaaaaatatgattttattttgtatggactaaaaataaaattctgaat 41541926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 43073069 - 43073118
Alignment:
Q  230 actaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||||||||||||||||  |||||| |||| ||||| |||||    
T  43073069 actaaaaaatgtgattttattttatagggactaaaaacaaaattgtgaat 43073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 45150744 - 45150695
Alignment:
Q  230 actaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  45150744 actaaaaagtgtgattttattttataaggactaaaaacaaaattctgaat 45150695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 24838146 - 24838094
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  24838146 gggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 24838094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 30071843 - 30071919
Alignment:
Q  204 aaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||| |||| ||||||||||  ||||||||||| ||| ||||||||||||  | |||| |||| |||||||||||    
T  30071843 aaaatgatgatggaaaattttatagggactaaaaagtgttattttattttataggaactaaaaacaaaattctgaat 30071919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 44158012 - 44157972
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    ||||||||||||||||||||||||||||  |||||| ||||    
T  44158012 gggactaaaaaatgtgattttattttataaggactaaaaac 44157972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 54767812 - 54767889
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| |||||||||||||| | ||||||| |||| |||||||||||    
T  54767812 aaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtatggactaaaaacaaaattctgaat 54767889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 45954020 - 45953944
Alignment:
Q  204 aaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  45954020 aaaatgctgatggaaaattttataaggactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 45953944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 34785083 - 34785160
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  34785083 aaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 34785160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 46175689 - 46175612
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  ||||||||||||| |||||||||||| |  |||||| |||| ||||| |||||    
T  46175689 aaaaatgctgatggaaaattttatagggactaaaaaatatgattttattttgtagggactaaaaacaaaattatgaat 46175612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 40593692 - 40593640
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  40593692 gggactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 40593640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 48128652 - 48128728
Alignment:
Q  203 aaaaatgctgatagaaaattttacgggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  ||| |||||  |||||||||||||| | | ||||| |||| |||||||||||    
T  48128652 aaaaatgctgatggaaaattttataggattaaaatgtgtgattttattttgtatagactaaaaacaaaattctgaat 48128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 11194778 - 11194828
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  11194778 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 11194828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 16852496 - 16852578
Alignment:
Q  198 agacaaaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||| |||||||||||| ||||||||||   |||||||||| ||| ||||||||||||  |||||| |||| ||||| |||||    
T  16852496 agacgaaaaatgctgatggaaaattttataaggactaaaaagtgtaattttattttatagggactaaaaacaaaattttgaat 16852578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 17605147 - 17605197
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  17605147 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 17605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 34784676 - 34784726
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  34784676 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 34784726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 31270993 - 31271070
Alignment:
Q  203 aaaaatgctgatagaaaattttacggga-ctaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  ||| ||||||| |||||||||||||| |  |||||| |||| |||||| ||||    
T  31270993 aaaaatgctgatggaaaattttataggaactaaaaagtgtgattttattttgtagggactaaaaacaaaattcggaat 31271070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 46799447 - 46799370
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   |||||||||| |||||||||||||| | ||||||| |||| ||| |||||||    
T  46799447 aaaaatgttgatggaaaattttatatggactaaaaagtgtgattttattttgtatggactaaaaacaaaactctgaat 46799370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 170938 - 170990
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| | |||||||||||| | ||||||| |||| |||||||||||    
T  170938 gggactaaaaagtatgattttattttgtatggactaaaaacaaaattctgaat 170990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 31798157 - 31798105
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  31798157 gggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 31798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 42541374 - 42541331
Alignment:
Q  203 aaaaatgctgatagaaaattttacgggactaaaaaatgtgatttt 247  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||    
T  42541374 aaaaatgctgat-gaaaattttatgggactaaaaagtgtgatttt 42541331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 16375 - 16326
Alignment:
Q  230 actaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||||||||||||||||  |||||| |||| |||||||||||    
T  16375 actaaaaaatgtgattttattttatagggactaaaaacaaaattctgaat 16326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 22079 - 22002
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   ||||||||||||||||||||||||| |  |||||| |||| |||||||||||    
T  22079 aaaaatgttgatggaaaattttataaggactaaaaaatgtgattttattttgtggggactaaaaacaaaattctgaat 22002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 4018159 - 4018236
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||| ||| ||||||||||   |||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  4018159 aaaaatgccgatggaaaattttataaggactaaaaagtgtgattttattttatagggactaaaaacaaaattctgaat 4018236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 28237394 - 28237317
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||  ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  28237394 aaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 28237317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 32222762 - 32222684
Alignment:
Q  202 aaaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||| |||| |||||||||||  ||||||||||||| ||||||||||||    || || ||||||||||||||||    
T  32222762 aaaaaatgatgatggaaaattttacaaggactaaaaaatgcgattttattttacagagaataaaaacgaaattctgaat 32222684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 34214686 - 34214736
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  34214686 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 34214736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 4718156 - 4718233
Alignment:
Q  203 aaaaatgctgatagaaaattttacggga-ctaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||  ||| ||||||| |||||||||||||| |  |||||| |||| ||||| |||||    
T  4718156 aaaaatgctgatggaaaattttataggaactaaaaagtgtgattttattttgtagggactaaaaacaaaattatgaat 4718233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 35065619 - 35065542
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| ||||  |||||||||  ||||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  35065619 aaaaatgttgatgaaaaattttatagggactaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaat 35065542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 29681707 - 29681630
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||   |||||||||| ||| ||||||||||||  |||||| |||| |||||||||||    
T  29681707 aaaaatgctgatggaaaattttataaggactaaaaagtgtaattttattttatagggactaaaaacaaaattctgaat 29681630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 32603369 - 32603300
Alignment:
Q  211 tgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||| ||||||||| | |||||||||||||||||||||||||| |  ||||||||||  |||||||||||    
T  32603369 tgatggaaaattttgcagggactaaaaaatgtgattttattttgtagggactacaaataaaattctgaat 32603300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 7466444 - 7466518
Alignment:
Q  203 aaaaatgctgatagaaaattttac--gggactaaaaaatgtgattttattttatctggactacaaacgaaattct 275  Q
    |||||||||||| |||||||||    ||||||||||| ||||||||||||||||  |||||| |||| |||||||    
T  7466444 aaaaatgctgattgaaaatttttatagggactaaaaagtgtgattttattttataaggactaaaaacaaaattct 7466518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 12693402 - 12693328
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctg 276  Q
    ||||||||||||  |||||||||  ||||||||||| |||||||||||||| | |||| || |||| ||||||||    
T  12693402 aaaaatgctgatgcaaaattttatagggactaaaaagtgtgattttattttgtatggattaaaaacaaaattctg 12693328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 31842564 - 31842491
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattct 275  Q
    ||||||| |||||||||||||||  ||||||||||| || ||||||||||| |  |||||| |||| |||||||    
T  31842564 aaaaatgttgatagaaaattttatagggactaaaaagtgcgattttattttgtagggactaaaaacaaaattct 31842491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 32132086 - 32132010
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||||||| ||||||||||| | ||||||| | || ||||||||||||| ||||||| || | |||||||||||    
T  32132086 aaaaatgctgatggaaaattttacagagactaaatagtgcgattttattttatatggacta-aaccaaaattctgaat 32132010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 30187829 - 30187764
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    |||||||||| | ||||||||||  ||||||||||||||||||||||||||||  |||||| ||||    
T  30187829 aaaaatgctgctggaaaattttatagggactaaaaaatgtgattttattttatagggactaaaaac 30187764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 32701807 - 32701735
Alignment:
Q  203 aaaaatgctgatagaaaattttacgg-gactaaaaaatgtgattttattttatctggactacaaacgaaattc 274  Q
    |||||| ||||| ||||||||||  | |||||||||||||||||||||||||| || |||| |||| ||||||    
T  32701807 aaaaatactgatggaaaattttatagagactaaaaaatgtgattttattttatatgaactaaaaacaaaattc 32701735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 34578407 - 34578355
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttat 254  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||||    
T  34578407 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttat 34578355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 24802239 - 24802289
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttatttt 252  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||    
T  24802239 aaaaatgctgatggaaaattttatagggactaaaaagtgtgattttatttt 24802289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 6042716 - 6042793
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    |||||||| |||  |||||||||  ||||||||||| ||||||||||||||||  |||||| |||| ||||| |||||    
T  6042716 aaaaatgcggatgaaaaattttatagggactaaaaagtgtgattttattttatagggactaaaaacaaaattgtgaat 6042793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 7401271 - 7401206
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    |||||||||||| ||||||||||  ||||||||||| |||| |||||||||||  |||||| ||||    
T  7401271 aaaaatgctgatggaaaattttatagggactaaaaagtgtggttttattttatagggactaaaaac 7401206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 10737789 - 10737841
Alignment:
Q  203 aaaaatgctgatagaaaattttac-gggactaaaaaatgtgattttattttat 254  Q
    ||||||| |||| |||||||||   ||||||||||||||||||||||||||||    
T  10737789 aaaaatgttgatggaaaattttgtagggactaaaaaatgtgattttattttat 10737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 28770775 - 28770815
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    ||||||||||||||||||||||||||||  |||||| ||||    
T  28770775 gggactaaaaaatgtgattttattttatagggactaaaaac 28770815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 31163327 - 31163367
Alignment:
Q  227 gggactaaaaaatgtgattttattttatctggactacaaac 267  Q
    ||||||||||||||||||||||||||||  |||||| ||||    
T  31163327 gggactaaaaaatgtgattttattttataaggactaaaaac 31163367  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 42957 - 42880
Alignment:
Q  203 aaaaatgctgatagaaaattttacg-ggactaaaaaatgtgattttattttatctggactacaaacgaaattctgaat 279  Q
    ||||||| |||| ||||||||||   |||||||||| |||||||||||||| |  |||||| |||| |||||||||||    
T  42957 aaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtggggactaaaaacaaaattctgaat 42880  T

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