View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3750_low_2 (Length: 349)

Name: NF3750_low_2
Description: NF3750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3750_low_2
NF3750_low_2
[»] chr4 (32 HSPs)
chr4 (45-342)||(28675195-28675492)
chr4 (5-44)||(26442422-26442461)
chr4 (1-44)||(29863551-29863594)
chr4 (1-44)||(31318753-31318796)
chr4 (1-44)||(35037609-35037652)
chr4 (1-42)||(43307397-43307438)
chr4 (1-46)||(55960698-55960743)
chr4 (6-46)||(4949267-4949307)
chr4 (7-47)||(7795022-7795062)
chr4 (7-47)||(28899238-28899278)
chr4 (5-45)||(33914369-33914409)
chr4 (5-41)||(41170776-41170812)
chr4 (1-44)||(1987741-1987784)
chr4 (1-44)||(4577557-4577600)
chr4 (1-44)||(23133565-23133608)
chr4 (7-46)||(24310544-24310583)
chr4 (1-44)||(45418067-45418110)
chr4 (6-45)||(51224871-51224910)
chr4 (6-44)||(29513729-29513767)
chr4 (6-44)||(56025256-56025294)
chr4 (7-44)||(1868916-1868953)
chr4 (1-46)||(3475867-3475912)
chr4 (1-46)||(7037512-7037557)
chr4 (7-44)||(9828006-9828043)
chr4 (5-46)||(36081797-36081838)
chr4 (7-44)||(37022272-37022309)
chr4 (7-44)||(37731926-37731963)
chr4 (6-46)||(4550332-4550372)
chr4 (5-45)||(8810570-8810610)
chr4 (4-44)||(37514163-37514203)
chr4 (4-44)||(51359821-51359861)
chr4 (4-44)||(55609197-55609236)
[»] chr2 (27 HSPs)
chr2 (1-44)||(40721771-40721814)
chr2 (1-45)||(5852473-5852517)
chr2 (1-45)||(11728149-11728193)
chr2 (7-46)||(24727424-24727463)
chr2 (1-44)||(30339993-30340036)
chr2 (1-47)||(6328664-6328710)
chr2 (1-47)||(44897623-44897669)
chr2 (3-44)||(3839410-3839451)
chr2 (3-44)||(12208442-12208483)
chr2 (1-45)||(25094351-25094395)
chr2 (7-47)||(27538939-27538979)
chr2 (1-45)||(35203777-35203821)
chr2 (1-44)||(19637229-19637272)
chr2 (1-44)||(19835822-19835865)
chr2 (1-44)||(27529529-27529572)
chr2 (1-44)||(34141442-34141485)
chr2 (6-44)||(30413759-30413797)
chr2 (1-43)||(34373006-34373048)
chr2 (7-44)||(305006-305043)
chr2 (1-46)||(18749391-18749436)
chr2 (7-44)||(27329132-27329169)
chr2 (1-45)||(11126462-11126506)
chr2 (18-50)||(12784444-12784476)
chr2 (1-41)||(17999749-17999789)
chr2 (1-41)||(28679131-28679171)
chr2 (1-45)||(30487497-30487541)
chr2 (6-46)||(35792661-35792701)
[»] chr8 (23 HSPs)
chr8 (1-44)||(5742685-5742728)
chr8 (1-46)||(27300344-27300389)
chr8 (1-45)||(21649196-21649240)
chr8 (1-44)||(22203243-22203286)
chr8 (1-44)||(28156203-28156246)
chr8 (1-44)||(32674260-32674303)
chr8 (1-44)||(35701855-35701898)
chr8 (1-44)||(37784402-37784445)
chr8 (6-52)||(29509258-29509304)
chr8 (1-46)||(34838298-34838343)
chr8 (1-41)||(18411323-18411363)
chr8 (1-44)||(4148683-4148726)
chr8 (1-44)||(23708976-23709019)
chr8 (5-44)||(34578409-34578448)
chr8 (6-45)||(36675335-36675374)
chr8 (6-44)||(43602456-43602494)
chr8 (6-44)||(45405841-45405879)
chr8 (7-44)||(13924022-13924059)
chr8 (18-47)||(25151003-25151032)
chr8 (5-46)||(35937544-35937585)
chr8 (6-47)||(38844823-38844864)
chr8 (1-46)||(40459790-40459835)
chr8 (4-44)||(10644833-10644873)
[»] chr3 (33 HSPs)
chr3 (1-44)||(42888800-42888843)
chr3 (1-42)||(38471644-38471685)
chr3 (1-44)||(2280177-2280220)
chr3 (1-44)||(14839073-14839116)
chr3 (3-45)||(14847548-14847590)
chr3 (1-47)||(16295461-16295507)
chr3 (1-47)||(17118394-17118440)
chr3 (1-43)||(44689793-44689835)
chr3 (1-46)||(11327106-11327151)
chr3 (1-46)||(42643233-42643278)
chr3 (1-46)||(54233496-54233541)
chr3 (6-46)||(7949789-7949829)
chr3 (1-45)||(30664502-30664546)
chr3 (1-45)||(38296690-38296734)
chr3 (6-46)||(41877686-41877726)
chr3 (1-45)||(47141628-47141672)
chr3 (4-43)||(3210667-3210706)
chr3 (1-44)||(9159064-9159107)
chr3 (3-42)||(25595942-25595981)
chr3 (1-44)||(50025726-50025769)
chr3 (3-42)||(52381184-52381223)
chr3 (1-47)||(1402647-1402693)
chr3 (7-44)||(29057659-29057696)
chr3 (4-45)||(29573387-29573428)
chr3 (7-44)||(29846914-29846951)
chr3 (3-44)||(45517687-45517728)
chr3 (3-44)||(48405410-48405451)
chr3 (1-46)||(55264815-55264860)
chr3 (6-46)||(462434-462474)
chr3 (5-45)||(2482706-2482746)
chr3 (4-44)||(16479632-16479671)
chr3 (1-45)||(25559703-25559747)
chr3 (1-45)||(48944738-48944782)
[»] chr7 (29 HSPs)
chr7 (1-46)||(2600562-2600607)
chr7 (1-45)||(11789719-11789763)
chr7 (1-45)||(30538625-30538669)
chr7 (1-44)||(28548249-28548292)
chr7 (1-44)||(48639411-48639454)
chr7 (1-47)||(45335859-45335905)
chr7 (1-46)||(33050181-33050226)
chr7 (7-47)||(25272599-25272639)
chr7 (1-45)||(37969930-37969974)
chr7 (1-44)||(11070228-11070271)
chr7 (1-44)||(27704435-27704478)
chr7 (7-46)||(27866560-27866599)
chr7 (3-46)||(40207830-40207873)
chr7 (1-44)||(41538482-41538525)
chr7 (1-40)||(41910213-41910252)
chr7 (5-47)||(7295447-7295489)
chr7 (1-43)||(23034341-23034383)
chr7 (6-44)||(48522156-48522194)
chr7 (1-46)||(2347087-2347132)
chr7 (6-43)||(34349060-34349097)
chr7 (1-45)||(47944981-47945026)
chr7 (1-45)||(47950411-47950456)
chr7 (1-41)||(640395-640435)
chr7 (1-45)||(29763829-29763873)
chr7 (11-47)||(33465066-33465102)
chr7 (7-47)||(37848643-37848683)
chr7 (1-45)||(41458928-41458972)
chr7 (6-46)||(42663082-42663122)
chr7 (6-46)||(48866963-48867003)
[»] chr1 (29 HSPs)
chr1 (1-46)||(6396325-6396370)
chr1 (1-44)||(41564908-41564951)
chr1 (1-47)||(23400017-23400063)
chr1 (1-47)||(41425239-41425285)
chr1 (1-46)||(12990497-12990542)
chr1 (1-46)||(28457375-28457420)
chr1 (7-47)||(30596720-30596760)
chr1 (1-41)||(48336466-48336506)
chr1 (1-44)||(1100217-1100260)
chr1 (1-44)||(8577530-8577573)
chr1 (7-46)||(16252782-16252821)
chr1 (1-44)||(21854492-21854535)
chr1 (5-44)||(22331366-22331405)
chr1 (1-44)||(24158650-24158693)
chr1 (1-43)||(5574287-5574329)
chr1 (1-35)||(11897183-11897217)
chr1 (6-44)||(26910432-26910470)
chr1 (2-44)||(27787489-27787531)
chr1 (6-44)||(43196122-43196160)
chr1 (6-44)||(49189241-49189279)
chr1 (7-44)||(10385427-10385464)
chr1 (7-44)||(19427521-19427558)
chr1 (1-46)||(26760560-26760605)
chr1 (6-47)||(37669395-37669436)
chr1 (7-44)||(43757599-43757636)
chr1 (7-44)||(46903481-46903518)
chr1 (6-39)||(49314368-49314401)
chr1 (4-44)||(21433432-21433472)
chr1 (7-43)||(50460735-50460771)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-44)||(4874-4917)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-44)||(145061-145104)
[»] chr5 (18 HSPs)
chr5 (1-44)||(3031834-3031877)
chr5 (1-44)||(18729317-18729360)
chr5 (1-44)||(25585484-25585527)
chr5 (1-44)||(29765830-29765873)
chr5 (1-44)||(39032632-39032675)
chr5 (1-44)||(12891124-12891167)
chr5 (1-44)||(14522992-14523035)
chr5 (9-44)||(14716193-14716228)
chr5 (1-44)||(24330010-24330053)
chr5 (1-47)||(1107978-1108024)
chr5 (6-44)||(7077375-7077413)
chr5 (7-45)||(38387609-38387647)
chr5 (7-44)||(12203158-12203195)
chr5 (1-46)||(30574405-30574450)
chr5 (1-45)||(3263536-3263580)
chr5 (1-45)||(9599756-9599800)
chr5 (4-44)||(18695318-18695358)
chr5 (6-46)||(42699055-42699095)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-47)||(1873-1919)
[»] chr6 (9 HSPs)
chr6 (6-47)||(25924897-25924938)
chr6 (1-46)||(27790263-27790308)
chr6 (7-47)||(16121160-16121200)
chr6 (1-44)||(3339527-3339570)
chr6 (1-44)||(34792022-34792065)
chr6 (6-44)||(28965873-28965911)
chr6 (7-44)||(2165323-2165360)
chr6 (7-44)||(2176956-2176993)
chr6 (4-44)||(25127864-25127904)
[»] scaffold0532 (1 HSPs)
scaffold0532 (4-46)||(10962-11004)
[»] scaffold0286 (1 HSPs)
scaffold0286 (7-44)||(17049-17086)
[»] scaffold0172 (1 HSPs)
scaffold0172 (6-46)||(16973-17013)
[»] scaffold0115 (1 HSPs)
scaffold0115 (6-46)||(35531-35571)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 45 - 342
Target Start/End: Complemental strand, 28675492 - 28675195
Alignment:
Q  45 atacattatgttcttcgggttcctctttcccaacgaaatgaaaacaaataatgttggcaatctcaatcttaaaatgaaccacctgtaaaatataactcat 144  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675492 atacattctgttcttaaggttcctctttcccaacgaaatgaaaacaaataatgttggcaatctcaatcttaaaatgaaccacctgtaaaatataactcat 28675393  T
Q  145 gtcatctccacttttcttctcaaacacttctaccaaatgctaccttgatttgtttagtttaataataatgttagatgtggattttgacatctaaaataag 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675392 gtcatctccacttttcttctcaaacacttctaccaaatgctaccttgatttgtttagtttaataataatgttagatgtggattttgacatctaaaataag 28675293  T
Q  245 taaataaccaaaatcaaaacttcaaaatttggtcctatatcatgcttcatcaatcacagaaaagacatgaacttattctaacaactttgagatgatgt 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28675292 taaataaccaaaatcaaaacttcaaaatttggtcctatatcatgcttcatcaatcacataaaagacatgaacttattctaacaactttgagatgatgt 28675195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 26442422 - 26442461
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26442422 caaaagttgtaccaaaatggttgtacaaatatcatttctc 26442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29863594 - 29863551
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  29863594 tgtacaaaagttataccaaaatggttgtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31318796 - 31318753
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  31318796 tgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 31318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35037652 - 35037609
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  35037652 tgtacaaaagttgtatcaaaatggttgtacaaatatcatttctc 35037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43307397 - 43307438
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttc 42  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  43307397 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttc 43307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55960743 - 55960698
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||    
T  55960743 tgtacaaaagttataccaaaatggttatacaaatatcatttctcat 55960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 4949267 - 4949307
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  4949267 aaaagttgtaccaaaatagttgtacaaatatcatttctcat 4949307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 7795062 - 7795022
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  7795062 aaagttgtacaaaaatggttgtacaaatatcatttctcata 7795022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 28899238 - 28899278
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  28899238 aaagttgtaccaaaatgattgtacaaatatcatttctcata 28899278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 33914369 - 33914409
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  33914369 caaaagttgtaccaaaatggttatacaaatatcatttctca 33914409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 41170812 - 41170776
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41170812 caaaagttgtaccaaaatggttgtacaaatatcattt 41170776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1987741 - 1987784
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  1987741 tgtacaaaaattgtactaaaatggttgtacaaatatcatttctc 1987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4577600 - 4577557
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  4577600 tgtacaaaaattgtacgaaaatggttgtacaaatatcatttctc 4577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23133565 - 23133608
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||    
T  23133565 tgtacaaaagttgtacaaaaatggttgtacaaatataatttctc 23133608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 24310544 - 24310583
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  24310544 aaagttgtacaaaaatggttgtacaaatatcatttctcat 24310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45418110 - 45418067
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||| ||||||||||||||||||| | |||||||||||||||||    
T  45418110 tgtagaaaagttgtaccaaaatggttatacaaatatcatttctc 45418067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 51224871 - 51224910
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  51224871 aaaagttgtagcaaaatggttgtacaaatatcatttctca 51224910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 29513729 - 29513767
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  29513729 aaaagttgtagcaaaatggttgtacaaatatcatttctc 29513767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 56025294 - 56025256
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  56025294 aaaagttgtagcaaaatggttgtacaaatatcatttctc 56025256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 1868916 - 1868953
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  1868916 aaagttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3475912 - 3475867
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||   ||||||| |||||||||||||||||||||    
T  3475912 tgtacaaaagttgtcataaaatggttgtacaaatatcatttctcat 3475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7037512 - 7037557
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||  |||| ||| |||||||||||||||||||||    
T  7037512 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctcat 7037557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 9828006 - 9828043
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  9828006 aaagttgtactaaaatggttgtacaaatatcatttctc 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 36081838 - 36081797
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||| |||||||||| ||| |||||||||||||||    
T  36081838 caaaagttgtagcaaaatggctatacgaatatcatttctcat 36081797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 37022309 - 37022272
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  37022309 aaagttgtatcaaaatggttgtacaaatatcatttctc 37022272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 37731963 - 37731926
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||  |||||||||||||||||||    
T  37731963 aaagttgtaccaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 4550372 - 4550332
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  4550372 aaaagttgtagcaaaatgattgtacaaatatcatttctcat 4550332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 8810610 - 8810570
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  8810610 caaaagttgtaagaaaatggttgtacaaatatcatttctca 8810570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37514163 - 37514203
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  37514163 acaaaagttgttacaaaatggatgtacaaatatcatttctc 37514203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 51359821 - 51359861
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 55609197 - 55609236
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  55609197 acaaaagttgtac-aaaatggttgtacaaatatcatttctc 55609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40721814 - 40721771
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40721814 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 40721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5852517 - 5852473
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  5852517 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctca 5852473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11728149 - 11728193
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  11728149 tgtacaaaagttgtaccaaaatggttgtacaaacatcatttctca 11728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 24727463 - 24727424
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  24727463 aaagttgtaccaaaatggttgtacaaatatcatttctcat 24727424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30340036 - 30339993
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  30340036 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6328710 - 6328664
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||    
T  6328710 tgtacaaaaattataccaaaatggttgtacaaatatcatttctcata 6328664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44897669 - 44897623
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  44897669 tgtacgaaagttgtacaaaaatggttgtacaaatatcatttctcata 44897623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 3839451 - 3839410
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  3839451 tacaaaagttataccaaaatggttgtacaaatatcatttctc 3839410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 12208483 - 12208442
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  12208483 tacaaaagttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25094395 - 25094351
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||    
T  25094395 tgtacaaaaattgtaccaaaatggttatacaaatatcatttctca 25094351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 27538939 - 27538979
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  27538939 aaagttgtacaaaaatggttgtacaaatatcatttctcata 27538979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35203777 - 35203821
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  35203777 tgtacaaaagttgaacaaaaatggttgtacaaatatcatttctca 35203821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19637272 - 19637229
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  19637272 tgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19835865 - 19835822
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  19835865 tgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19835822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27529572 - 27529529
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| | |||||||||||||||||    
T  27529572 tgtacaaaagttgtacaaaaatggttctacaaatatcatttctc 27529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34141485 - 34141442
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||  |||||||||||||||||||    
T  34141485 tgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 34141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 30413759 - 30413797
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  30413759 aaaagttgtagcaaaatggttgtacaaatatcatttctc 30413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34373048 - 34373006
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    ||||||||| || ||||||||||| ||||||||||||||||||    
T  34373048 tgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 305006 - 305043
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  305006 aaagttgtaccaaaatggttgtacaaatataatttctc 305043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18749391 - 18749436
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||    
T  18749391 tgtacaaaaattatacaaaaatggttgtacaaatatcatttctcat 18749436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 27329132 - 27329169
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||  |||||||||||||||||||    
T  27329132 aaagttgtaccaaaatgattgtacaaatatcatttctc 27329169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11126506 - 11126462
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||| | | ||||||| ||||||||||||||||||||    
T  11126506 tgtacaaaagttatgcaaaaatggttgtacaaatatcatttctca 11126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 12784444 - 12784476
Alignment:
Q  18 aaaatggctgtacaaatatcatttctcatacat 50  Q
    ||||||| |||||||||||||||||||||||||    
T  12784444 aaaatggttgtacaaatatcatttctcatacat 12784476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17999789 - 17999749
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  17999789 tgtacaaaagttgtacacaaatggttgtacaaatatcattt 17999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28679171 - 28679131
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  28679171 tgtacaaaagttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30487497 - 30487541
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||||  |||| ||| ||||||||||||||||||||    
T  30487497 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 30487541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 35792661 - 35792701
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  35792661 aaaaattgtaacaaaatggttgtacaaatatcatttctcat 35792701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5742685 - 5742728
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  5742685 tgtacaaaagttgtaccaaaatggttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27300389 - 27300344
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  27300389 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctcat 27300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21649196 - 21649240
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  21649196 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctca 21649240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22203243 - 22203286
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  22203243 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 22203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28156246 - 28156203
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  28156246 tgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 28156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32674260 - 32674303
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  32674260 tgtacaaaagttataccaaaatggttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35701855 - 35701898
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  35701855 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37784402 - 37784445
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  37784402 tgtacaaaagttataccaaaatggttgtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 29509304 - 29509258
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcatacatta 52  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||    
T  29509304 aaaagttgtagcaaaatggttgtacaaatatcatttctcataaatta 29509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34838298 - 34838343
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34838298 tgtacaaaagttgtacaaaattggatgtacaaatatcatttctcat 34838343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18411323 - 18411363
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  18411323 tgtacaaaagttgtaccaaaattgttgtacaaatatcattt 18411363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4148683 - 4148726
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| | |||||||||||||||||    
T  4148683 tgtacaaaagttgtacaaaaatggttatacaaatatcatttctc 4148726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23709019 - 23708976
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  23709019 tgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 23708976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 34578409 - 34578448
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  34578409 caaaagttgtacaaaaatggttgtacaaatatcatttctc 34578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 36675374 - 36675335
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  36675374 aaaagttgtacaaaaatggttgtacaaatatcatttctca 36675335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 43602456 - 43602494
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  43602456 aaaagttgtagcaaaatggttgtacaaatatcatttctc 43602494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 45405841 - 45405879
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  45405841 aaaagttgtatcaaaatggttgtacaaatatcatttctc 45405879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 13924059 - 13924022
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  13924059 aaagttgtacaaaaatggttgtacaaatatcatttctc 13924022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 25151003 - 25151032
Alignment:
Q  18 aaaatggctgtacaaatatcatttctcata 47  Q
    ||||||||||||||||||||||||||||||    
T  25151003 aaaatggctgtacaaatatcatttctcata 25151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 35937544 - 35937585
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||  |||||||| |||||||||||||||||||||    
T  35937544 caaaagttgttacaaaatggttgtacaaatatcatttctcat 35937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 38844823 - 38844864
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  38844823 aaaagttgtcacaaaatggttgtacaaatatcatttctcata 38844864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40459790 - 40459835
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||| ||||||||| | ||||||||| |||||||||||    
T  40459790 tgtacaaaagttataccaaaatagttgtacaaatttcatttctcat 40459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10644833 - 10644873
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  10644833 acaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42888800 - 42888843
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  42888800 tgtacaaaagttgtacaaaaatggctgtacaaatatcatttctc 42888843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38471685 - 38471644
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  38471685 tgtacaaaagttgtaccaaaatggttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2280220 - 2280177
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  2280220 tgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14839073 - 14839116
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  14839073 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 14847548 - 14847590
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  14847548 tacaaaagttgtaccaaaatggttgcacaaatatcatttctca 14847590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16295507 - 16295461
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  16295507 tgtacaaaagttgtatcaaattggttgtacaaatatcatttctcata 16295461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17118440 - 17118394
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||    
T  17118440 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttttcata 17118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44689835 - 44689793
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  44689835 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11327151 - 11327106
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||    
T  11327151 tgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcat 11327106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42643278 - 42643233
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  42643278 tgtacaaaagttgttccaaattggttgtacaaatatcatttctcat 42643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54233496 - 54233541
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||    
T  54233496 tgtacaaaagttgtaaaaaaatggttgtacaaatatcatttctcat 54233541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 7949829 - 7949789
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  7949829 aaaagttgtagcaaaatggttgtacaaatatcatttctcat 7949789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30664546 - 30664502
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  30664546 tgtacaaaagttgtacaaaaatgattgtacaaatatcatttctca 30664502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38296690 - 38296734
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||    
T  38296690 tgtacaaaagttgtactaaaatggttgtacaaatattatttctca 38296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 41877726 - 41877686
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  41877726 aaaagttgtagcaaaatggttgtacaaatatcatttctcat 41877686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47141628 - 47141672
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||    
T  47141628 tgtacaaaaattataccaaaatggttgtacaaatatcatttctca 47141672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 3210667 - 3210706
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  3210667 acaaaagttgtaccaaaatggttgtacaaaaatcatttct 3210706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9159064 - 9159107
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  9159064 tgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 9159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 25595981 - 25595942
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttc 42  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  25595981 tacaaaagttgtaccaaaatagttgtacaaatatcatttc 25595942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50025726 - 50025769
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| || ||||||||||| |||||||||||||||||||    
T  50025726 tgtacaaaatttataccaaaatggttgtacaaatatcatttctc 50025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 52381223 - 52381184
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttc 42  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  52381223 tacaaaagttataccaaaatggttgtacaaatatcatttc 52381184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1402693 - 1402647
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||||||||||||   ||||||| ||||||||||||||||||||||    
T  1402693 tgtacaaaagttgtcataaaatggatgtacaaatatcatttctcata 1402647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 29057696 - 29057659
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  29057696 aaagttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 29573387 - 29573428
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  29573387 acaaaagttgttacaaaatggttgtacaaatatcatttctca 29573428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 29846914 - 29846951
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  29846914 aaagttgtacaaaaatggttgtacaaatatcatttctc 29846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 45517687 - 45517728
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  45517687 tacaaaagttatacaaaaatggttgtacaaatatcatttctc 45517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 48405451 - 48405410
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||  |||||||| |||||||||||||||||||    
T  48405451 tacaaaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55264860 - 55264815
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||| ||||||| ||| ||||||| |||||||||||||||||||||    
T  55264860 tgtataaaagttatacaaaaatggttgtacaaatatcatttctcat 55264815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 462434 - 462474
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  462434 aaaagttgtcacaaaatggttgtacaaatatcatttctcat 462474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 2482706 - 2482746
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  2482706 caaaagttgtcacaaaatggatgtacaaatatcatttctca 2482746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16479671 - 16479632
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  16479671 acaaaagttgtac-aaaatggttgtacaaatatcatttctc 16479632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25559747 - 25559703
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||| |||| || ||||||||||| ||||||||||||||||||||    
T  25559747 tgtataaaaattataccaaaatggttgtacaaatatcatttctca 25559703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48944738 - 48944782
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||||   ||||||| ||||||||||||||||||||    
T  48944738 tgtacaaaagttgttagaaaatggttgtacaaatatcatttctca 48944782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2600562 - 2600607
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  2600562 tgtacaaaagttgtactaaaatggttgtacaaatatcatttctcat 2600607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11789719 - 11789763
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  11789719 tgtacaaaagttgtactaaaatggttgtacaaatatcatttctca 11789763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30538669 - 30538625
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  30538669 tgtacaaaagttgtaccaaaattgttgtacaaatatcatttctca 30538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28548249 - 28548292
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  28548249 tgtacaaaagttgtaccaaaatagttgtacaaatatcatttctc 28548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48639411 - 48639454
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  48639411 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45335905 - 45335859
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||    
T  45335905 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttttcata 45335859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33050226 - 33050181
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||    
T  33050226 tgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcat 33050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 25272639 - 25272599
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  25272639 aaagttgtacaaaaatggttgtacaaatatcatttctcata 25272599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37969974 - 37969930
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||    
T  37969974 tgtacaaaagttgtatcaaaatagttgtacaaatatcatttctca 37969930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11070271 - 11070228
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  11070271 tgtacaaaagttatactaaaatggttgtacaaatatcatttctc 11070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27704478 - 27704435
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||| | |||||||||||||||||||    
T  27704478 tgtacaaaagttgtacaaaaatagttgtacaaatatcatttctc 27704435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 27866560 - 27866599
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  27866560 aaagttgtacaaaaatggttgtacaaatatcatttctcat 27866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 40207830 - 40207873
Alignment:
Q  3 tacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||| ||||| | |||||||||||||||||||||    
T  40207830 tacaaaagttgtacaaaaatagttgtacaaatatcatttctcat 40207873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41538525 - 41538482
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  41538525 tgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 41538482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41910213 - 41910252
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatt 40  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  41910213 tgtacaaaagttgtacaaaaatggttgtacaaatatcatt 41910252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 7295489 - 7295447
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||    
T  7295489 caaaaattgtactaaaatggttgtacaaatatcatttctcata 7295447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23034341 - 23034383
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||    
T  23034341 tgtacaaaaattgtacaaaaatggttgtacaaatatcatttct 23034383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 48522194 - 48522156
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  48522194 aaaagttgtacaaaaatggttgtacaaatatcatttctc 48522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2347087 - 2347132
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||| ||||||||  |||||||| |||||||||||||||||||||    
T  2347087 tgtaccaaagttgtcacaaaatggttgtacaaatatcatttctcat 2347132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 34349060 - 34349097
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  34349060 aaaagttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47945026 - 47944981
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggct-gtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||    
T  47945026 tgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctca 47944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47950456 - 47950411
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggct-gtacaaatatcatttctca 45  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||    
T  47950456 tgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctca 47950411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 640435 - 640395
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    ||||||||| |||||| ||||||| ||||||||||||||||    
T  640435 tgtacaaaaattgtacaaaaatggttgtacaaatatcattt 640395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29763873 - 29763829
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||    
T  29763873 tgtacaaaagttatcacaaaatggttgtacaaatatcatttctca 29763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 33465066 - 33465102
Alignment:
Q  11 ttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  33465066 ttgtacaaaaatggttgtacaaatatcatttctcata 33465102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37848643 - 37848683
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  37848643 aaagttgtacaaaaatgattgtacaaatatcatttctcata 37848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41458928 - 41458972
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  41458928 tgtacaaaaattgtactaaaatggttgtacaaatattatttctca 41458972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42663122 - 42663082
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  42663122 aaaagttgtcacaaaatggatgtacaaatatcatttctcat 42663082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 48866963 - 48867003
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||  |||| |||||||||||||||||||||||||    
T  48866963 aaaagttgtcacaaagtggctgtacaaatatcatttctcat 48867003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6396370 - 6396325
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  6396370 tgtacaaaagttgtaccaaaatggttgtaccaatatcatttctcat 6396325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41564908 - 41564951
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  41564908 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 41564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23400017 - 23400063
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  23400017 tgtacaaaagttgtataaaaatggttgtacaaatatcatttctcata 23400063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41425285 - 41425239
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    
T  41425285 tgtacgaaagttgtaccaaaatagttgtacaaatatcatttctcata 41425239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12990497 - 12990542
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||    
T  12990497 tgtacgaaagttgtacaaaaatggttgtacaaatatcatttctcat 12990542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28457375 - 28457420
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||    
T  28457375 tgtataaaagttgtaccaaaatgattgtacaaatatcatttctcat 28457420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 30596760 - 30596720
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  30596760 aaagttgtaccaaaatggttgtacatatatcatttctcata 30596720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48336466 - 48336506
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcattt 41  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  48336466 tgtacaaaagttgtatcaaaatggttgtacaaatatcattt 48336506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1100260 - 1100217
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  1100260 tgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8577530 - 8577573
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  8577530 tgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 8577573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 16252782 - 16252821
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  16252782 aaagttgtacaaaaatggttgtacaaatatcatttctcat 16252821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21854492 - 21854535
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  21854492 tgtacaaaagttgtaccaaaataattgtacaaatatcatttctc 21854535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 22331405 - 22331366
Alignment:
Q  5 caaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  22331405 caaaaattgtaccaaaatggttgtacaaatatcatttctc 22331366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24158693 - 24158650
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  24158693 tgtataaaagttgtaccgaaatggttgtacaaatatcatttctc 24158650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5574287 - 5574329
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    |||||||||||||||| ||||||  ||||||||||||||||||    
T  5574287 tgtacaaaagttgtacaaaaatgattgtacaaatatcatttct 5574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11897217 - 11897183
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaata 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11897217 tgtacaaaagttgtaccaaaatggttgtacaaata 11897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 26910470 - 26910432
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  26910470 aaaagttgtgccaaaatggttgtacaaatatcatttctc 26910432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 27787531 - 27787489
Alignment:
Q  2 gtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||    
T  27787531 gtacaaaagttgtaccaaattggttgtataaatatcatttctc 27787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 43196122 - 43196160
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  43196122 aaaagttgtagcaaaatggatgtacaaatatcatttctc 43196160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 49189241 - 49189279
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  49189241 aaaagttgtagcaaaatggttgtacaaatatcatttctc 49189279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 10385464 - 10385427
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  10385464 aaagttgtagcaaaatggttgtacaaatatcatttctc 10385427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 19427558 - 19427521
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  19427558 aaagttgtaccaaaatggttgtataaatatcatttctc 19427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26760605 - 26760560
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  26760605 tgtacaaaaattgtacaaaaatggttgtacaaatatcaattctcat 26760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 37669436 - 37669395
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  37669436 aaaagttgtatcaaaatgattgtacaaatatcatttctcata 37669395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 43757636 - 43757599
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  43757636 aaagttgtatcaaaatggttgtacaaatatcatttctc 43757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 46903518 - 46903481
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  46903518 aaagttgtatcaaaatggttgtacaaatatcatttctc 46903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 49314401 - 49314368
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcat 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  49314401 aaaagttgtaccaaaatggttgtacaaatatcat 49314368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21433432 - 21433472
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  21433432 acaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 50460735 - 50460771
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttct 43  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  50460735 aaagttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4874 - 4917
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  4874 tgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 145104 - 145061
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  145104 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 145061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3031877 - 3031834
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  3031877 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18729317 - 18729360
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  18729317 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25585484 - 25585527
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  25585484 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29765873 - 29765830
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  29765873 tgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39032632 - 39032675
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  39032632 tgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12891124 - 12891167
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||| | ||||||| |||||||||||||||||||    
T  12891124 tgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctc 12891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14522992 - 14523035
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||    
T  14522992 tgtaaaaaagttgtacaaaaatggttgtacaaatatcatttctc 14523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 14716193 - 14716228
Alignment:
Q  9 agttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||| |||||||||||||||||||||||||||||    
T  14716193 agttgtcccaaaatggctgtacaaatatcatttctc 14716228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24330010 - 24330053
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  24330010 tgtacaaaagttgtaccaaaataattgtacaaatatcatttctc 24330053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1108024 - 1107978
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    ||||||||||||||| |||||| |  |||||||||||||||||||||    
T  1108024 tgtacaaaagttgtaacaaaatagtcgtacaaatatcatttctcata 1107978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 7077375 - 7077413
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  7077375 aaaagttgtaacaaaatggttgtacaaatatcatttctc 7077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 38387647 - 38387609
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  38387647 aaagttgtacaaaaatggttgtacaaatatcatttctca 38387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 12203195 - 12203158
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  12203195 aaagttgtacaaaaatggttgtacaaatatcatttctc 12203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30574405 - 30574450
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||||||  |||| ||| |||||||||||||||||||||    
T  30574405 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctcat 30574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3263536 - 3263580
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||||  |||| ||| ||||||||||||||||||||    
T  3263536 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 3263580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9599756 - 9599800
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctca 45  Q
    ||||||||||||||  |||| ||| ||||||||||||||||||||    
T  9599756 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 9599800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18695358 - 18695318
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  18695358 acaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42699095 - 42699055
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  42699095 aaaagttgtcacaaaatggttgtacaaatatcatttctcat 42699055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1873 - 1919
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  1873 tgtacaaaagttatacaaaaatggttgtacaaatatcatttctcata 1919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 25924897 - 25924938
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  25924897 aaaagttgtagcaaaatggttgtacaaatatcatttctcata 25924938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27790263 - 27790308
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||    
T  27790263 tgtataaaagttgtacaaaaatggttgtacaaatatcatttctcat 27790308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 16121200 - 16121160
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctcata 47  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  16121200 aaagttgtacaaaaatggttgtacaaatatcatttctcata 16121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3339527 - 3339570
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  3339527 tgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34792065 - 34792022
Alignment:
Q  1 tgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||||||| ||||||  |||||||||||||||||||    
T  34792065 tgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 34792022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28965873 - 28965911
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  28965873 aaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 2165323 - 2165360
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  2165323 aaagttgtacaaaaatggttgtacaaatatcatttctc 2165360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 2176956 - 2176993
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  2176956 aaagttgtacaaaaatggttgtacaaatatcatttctc 2176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25127864 - 25127904
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  25127864 acaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 11004 - 10962
Alignment:
Q  4 acaaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||    
T  11004 acaaaagttgtcccaaaatggatgttcaaatatcatttctcat 10962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 17086 - 17049
Alignment:
Q  7 aaagttgtaccaaaatggctgtacaaatatcatttctc 44  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  17086 aaagttgtacaaaaatggttgtacaaatatcatttctc 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 17013 - 16973
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  17013 aaaagttgtagtaaaatggttgtacaaatatcatttctcat 16973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 35531 - 35571
Alignment:
Q  6 aaaagttgtaccaaaatggctgtacaaatatcatttctcat 46  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  35531 aaaagttgtagcaaaatgattgtacaaatatcatttctcat 35571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University