View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3753_low_8 (Length: 250)
Name: NF3753_low_8
Description: NF3753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3753_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 56326171 - 56326405
Alignment:
| Q |
1 |
ccaaataacacacccactactgccactagcccccctccagccaactcaacagttcgttacagagtggggtgtctttttaacatctatcactggcttacaa |
100 |
Q |
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| T |
56326171 |
ccaaataacacacccactactgccactagcccccctccagccaactcaacagttcgttacagagtagggtgtctttttaacatctatcactggcttacaa |
56326270 |
T |
|
| Q |
101 |
ttccctgcatcctatccccactttattcttatgtgcacattagttattttaggggttttccagtcttgttggtttatcacctatatcttaaagcagaccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
56326271 |
ttccctgcatcctatccccactttattcttatgtgcacattagttattttaggggttttccagtcttgttggtttatcacctatatattaaagcagaccc |
56326370 |
T |
|
| Q |
201 |
tatttaatatgacaagaattaaattaagttcaatc |
235 |
Q |
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||||||||||||||| ||||||||||||||||||| |
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| T |
56326371 |
tatttaatatgacaacaattaaattaagttcaatc |
56326405 |
T |
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