View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3755_high_8 (Length: 396)
Name: NF3755_high_8
Description: NF3755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3755_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 40359764 - 40359471
Alignment:
| Q |
1 |
taaactagttgttgagccatttactacatatagggcatgacccaaatcataacaaatgtttgttgtctgttaattaattgtaatgtatatagtttgtaag |
100 |
Q |
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| T |
40359764 |
taaactagttgttgagccatttactacatatagggcatgatccaaatcataacaaatgtttgttgtctgttaattaattgtaatgtatatagtttgtcag |
40359665 |
T |
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| Q |
101 |
aatgaaaatcataccacatt-catggtttgtggttctagctttgatccttcaaacaactaaattacagaacagacgaactcattatcctcacagaaaatc |
199 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40359664 |
aatgaaaatcataccacatttcatggtttgtggttctagctttgatccttcaaacaactaaattacagaacagacgaactcattatcctcacagaaaatc |
40359565 |
T |
|
| Q |
200 |
tctaaatcattcattatctttatcaaacttcagcagcaaacccagagattagttagacaactttatcaccagttgctttgcttgttgattgctt |
293 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40359564 |
tctaaatcattcattatccttatcaaacttcagcagcaaacccagagattagttagacaactttatcaccagttgctttgcttgttgattgctt |
40359471 |
T |
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