View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3761_high_48 (Length: 235)
Name: NF3761_high_48
Description: NF3761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3761_high_48 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 51615989 - 51615776
Alignment:
| Q |
8 |
ctgcaacagtaacttatcagtacaactcaaaaccccactaagaaagtgaaacagaagcaattaattcatcattccatcaccatccaaacttggagagctt |
107 |
Q |
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| T |
51615989 |
ctgcaacagtaacttatcagtacaactcaaaaccccactaagaaagtgaaacagaagcaattaattcatcattccatcaccatccaaacttggagagctt |
51615890 |
T |
|
| Q |
108 |
tcaactcaacaacaatcaaaacgaatttccactgcacttgttacataatgatcaaggttctgaaaacctattccagcctcaatccaatttatcagcacta |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51615889 |
tcaactcaacaacaatcaaaacgaatttccactgcacttgttacataatgatcaaggttctgaaaacctattccagcctcaatccaatttatcaggacta |
51615790 |
T |
|
| Q |
208 |
tcacataaataaat |
221 |
Q |
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|||||||||||||| |
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| T |
51615789 |
tcacataaataaat |
51615776 |
T |
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