View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3762_high_18 (Length: 446)

Name: NF3762_high_18
Description: NF3762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3762_high_18
NF3762_high_18
[»] chr4 (72 HSPs)
chr4 (204-433)||(38974964-38975193)
chr4 (41-137)||(38975260-38975356)
chr4 (40-120)||(30342825-30342907)
chr4 (40-121)||(51436138-51436221)
chr4 (40-120)||(3716325-3716407)
chr4 (40-120)||(27538915-27538997)
chr4 (40-120)||(41759985-41760067)
chr4 (38-116)||(36592357-36592437)
chr4 (40-122)||(53389171-53389255)
chr4 (40-120)||(14802712-14802794)
chr4 (40-120)||(28037685-28037767)
chr4 (40-120)||(30539569-30539651)
chr4 (40-120)||(34280553-34280635)
chr4 (37-120)||(56361634-56361717)
chr4 (37-120)||(9858244-9858329)
chr4 (37-120)||(31908443-31908528)
chr4 (37-120)||(36091059-36091144)
chr4 (40-114)||(52589077-52589153)
chr4 (40-120)||(43137689-43137771)
chr4 (40-95)||(46041728-46041783)
chr4 (37-120)||(29646624-29646709)
chr4 (41-120)||(48579234-48579315)
chr4 (41-120)||(52809269-52809350)
chr4 (53-120)||(18425455-18425524)
chr4 (37-124)||(26117742-26117832)
chr4 (37-120)||(53936833-53936919)
chr4 (40-95)||(37855148-37855203)
chr4 (41-120)||(19842438-19842519)
chr4 (37-116)||(39162126-39162207)
chr4 (37-120)||(46216093-46216178)
chr4 (39-120)||(48647344-48647428)
chr4 (38-95)||(8256490-8256547)
chr4 (38-95)||(8269908-8269965)
chr4 (37-120)||(9356703-9356789)
chr4 (37-118)||(32570370-32570453)
chr4 (42-118)||(38835854-38835932)
chr4 (37-117)||(47302399-47302481)
chr4 (40-120)||(48066329-48066411)
chr4 (40-95)||(55722503-55722558)
chr4 (41-120)||(6807319-6807400)
chr4 (37-120)||(31681337-31681422)
chr4 (37-95)||(49625006-49625064)
chr4 (43-95)||(1414426-1414478)
chr4 (41-118)||(8749330-8749409)
chr4 (42-117)||(23059095-23059173)
chr4 (324-428)||(38955625-38955729)
chr4 (37-73)||(43363377-43363413)
chr4 (37-73)||(50383650-50383686)
chr4 (37-120)||(24566685-24566771)
chr4 (40-120)||(37519288-37519370)
chr4 (40-120)||(37523504-37523586)
chr4 (41-117)||(38961289-38961367)
chr4 (37-117)||(48262565-48262646)
chr4 (37-118)||(24980262-24980346)
chr4 (37-116)||(46004645-46004726)
chr4 (37-121)||(33491482-33491569)
chr4 (37-70)||(52607891-52607924)
chr4 (37-73)||(352793-352829)
chr4 (41-73)||(4720538-4720570)
chr4 (37-120)||(24291978-24292063)
chr4 (37-73)||(24535806-24535842)
chr4 (37-120)||(32845974-32846060)
chr4 (37-73)||(34828772-34828808)
chr4 (37-73)||(36631355-36631391)
chr4 (215-259)||(38955516-38955560)
chr4 (37-73)||(42177661-42177697)
chr4 (41-73)||(43147542-43147574)
chr4 (41-120)||(50607684-50607766)
chr4 (37-73)||(50775824-50775860)
chr4 (37-120)||(51944435-51944521)
chr4 (37-73)||(54506193-54506229)
chr4 (37-73)||(54996147-54996183)
[»] chr1 (82 HSPs)
chr1 (40-121)||(27295057-27295140)
chr1 (40-121)||(922166-922249)
chr1 (40-120)||(41073270-41073352)
chr1 (40-117)||(51781428-51781507)
chr1 (40-120)||(16482576-16482658)
chr1 (40-130)||(8461850-8461942)
chr1 (40-121)||(50905580-50905663)
chr1 (40-120)||(18641888-18641970)
chr1 (40-120)||(28493810-28493892)
chr1 (40-120)||(31931022-31931104)
chr1 (40-120)||(35305151-35305233)
chr1 (41-120)||(23304407-23304488)
chr1 (38-120)||(9166873-9166957)
chr1 (40-114)||(51519788-51519864)
chr1 (40-118)||(51984936-51985016)
chr1 (37-118)||(2247069-2247152)
chr1 (37-120)||(35874259-35874345)
chr1 (40-120)||(5956851-5956933)
chr1 (37-117)||(26102794-26102876)
chr1 (40-120)||(37498744-37498826)
chr1 (38-120)||(38717754-38717839)
chr1 (40-120)||(39190881-39190963)
chr1 (40-120)||(45423609-45423691)
chr1 (40-120)||(46771056-46771138)
chr1 (38-120)||(48760125-48760210)
chr1 (37-120)||(632969-633054)
chr1 (38-121)||(42317147-42317232)
chr1 (40-119)||(44246322-44246403)
chr1 (41-120)||(52303013-52303094)
chr1 (42-120)||(48616773-48616853)
chr1 (37-94)||(50239555-50239612)
chr1 (37-120)||(477755-477841)
chr1 (37-118)||(11778957-11779040)
chr1 (37-120)||(34038485-34038571)
chr1 (41-118)||(51184044-51184123)
chr1 (38-120)||(6965932-6966017)
chr1 (40-83)||(29106688-29106731)
chr1 (37-118)||(30263903-30263987)
chr1 (40-92)||(23056795-23056847)
chr1 (41-120)||(24381316-24381398)
chr1 (37-118)||(26011263-26011346)
chr1 (43-95)||(33098982-33099034)
chr1 (43-120)||(34256453-34256532)
chr1 (41-120)||(44263646-44263728)
chr1 (37-120)||(51787789-51787875)
chr1 (37-117)||(27352850-27352932)
chr1 (40-95)||(38262458-38262513)
chr1 (40-95)||(39971593-39971648)
chr1 (41-120)||(12227121-12227202)
chr1 (38-119)||(31530633-31530719)
chr1 (37-116)||(52260817-52260898)
chr1 (37-120)||(6234301-6234386)
chr1 (41-117)||(52345926-52346005)
chr1 (41-120)||(2249891-2249973)
chr1 (37-118)||(2620648-2620731)
chr1 (39-120)||(7121957-7122040)
chr1 (41-120)||(12105484-12105566)
chr1 (41-120)||(17554142-17554224)
chr1 (37-73)||(21072824-21072860)
chr1 (37-73)||(31821903-31821939)
chr1 (37-120)||(32144989-32145075)
chr1 (37-120)||(45622805-45622891)
chr1 (37-120)||(48977197-48977283)
chr1 (38-70)||(49616148-49616180)
chr1 (37-73)||(51056246-51056282)
chr1 (41-95)||(6520310-6520364)
chr1 (39-73)||(25702780-25702814)
chr1 (37-120)||(28791689-28791774)
chr1 (43-120)||(29953926-29954006)
chr1 (37-120)||(33985911-33985996)
chr1 (37-91)||(35910193-35910247)
chr1 (41-120)||(44978869-44978950)
chr1 (37-70)||(17525489-17525522)
chr1 (38-95)||(36275039-36275096)
chr1 (40-69)||(43306582-43306611)
chr1 (37-70)||(45809496-45809529)
chr1 (41-73)||(7227881-7227913)
chr1 (41-120)||(9223181-9223262)
chr1 (37-73)||(38260852-38260888)
chr1 (37-122)||(47209044-47209131)
chr1 (37-73)||(47693256-47693292)
chr1 (37-117)||(50631913-50631996)
[»] chr7 (45 HSPs)
chr7 (40-118)||(40941877-40941957)
chr7 (37-120)||(45857795-45857880)
chr7 (40-120)||(3909928-3910010)
chr7 (40-120)||(30624047-30624129)
chr7 (37-122)||(11485994-11486081)
chr7 (40-120)||(30862789-30862871)
chr7 (40-120)||(38129709-38129791)
chr7 (37-120)||(18990091-18990176)
chr7 (37-117)||(30936413-30936495)
chr7 (40-117)||(1691315-1691394)
chr7 (40-120)||(27956377-27956460)
chr7 (40-117)||(28326684-28326763)
chr7 (40-116)||(21699613-21699691)
chr7 (40-120)||(41381497-41381579)
chr7 (40-120)||(41913418-41913500)
chr7 (39-120)||(42974895-42974978)
chr7 (37-120)||(43750075-43750160)
chr7 (41-120)||(30076659-30076741)
chr7 (40-95)||(41331756-41331811)
chr7 (37-117)||(47748123-47748205)
chr7 (41-120)||(6791762-6791844)
chr7 (37-118)||(41809204-41809287)
chr7 (41-120)||(41968747-41968829)
chr7 (40-120)||(42710931-42711013)
chr7 (40-120)||(23331700-23331784)
chr7 (37-91)||(30317226-30317280)
chr7 (37-116)||(31482378-31482459)
chr7 (37-117)||(3214521-3214604)
chr7 (37-120)||(15715904-15715990)
chr7 (37-120)||(24953249-24953335)
chr7 (37-73)||(28265074-28265110)
chr7 (41-120)||(30891278-30891360)
chr7 (37-120)||(35357701-35357787)
chr7 (59-123)||(45458695-45458761)
chr7 (37-71)||(1269324-1269358)
chr7 (41-95)||(8159952-8160006)
chr7 (37-95)||(32529502-32529560)
chr7 (53-120)||(44964158-44964227)
chr7 (37-117)||(1806484-1806567)
chr7 (46-120)||(8770695-8770770)
chr7 (37-73)||(18519964-18520000)
chr7 (37-120)||(23608312-23608398)
chr7 (37-73)||(35291647-35291683)
chr7 (40-120)||(43069080-43069160)
chr7 (37-120)||(47219956-47220041)
[»] chr5 (54 HSPs)
chr5 (41-118)||(21605650-21605729)
chr5 (40-118)||(6560828-6560908)
chr5 (40-120)||(1662018-1662100)
chr5 (40-120)||(43237677-43237759)
chr5 (41-120)||(34302646-34302727)
chr5 (40-120)||(6114098-6114180)
chr5 (40-120)||(6532579-6532661)
chr5 (40-119)||(3056386-3056467)
chr5 (37-117)||(13090917-13090999)
chr5 (37-120)||(9589209-9589294)
chr5 (37-120)||(28332120-28332206)
chr5 (40-120)||(42917117-42917199)
chr5 (37-120)||(4618033-4618118)
chr5 (41-117)||(14967235-14967313)
chr5 (37-120)||(35162351-35162436)
chr5 (40-114)||(18228783-18228859)
chr5 (40-92)||(2029383-2029435)
chr5 (40-117)||(13410545-13410624)
chr5 (37-110)||(35817669-35817744)
chr5 (40-95)||(2141269-2141324)
chr5 (37-117)||(27116465-27116547)
chr5 (37-120)||(12362679-12362764)
chr5 (37-120)||(21051625-21051710)
chr5 (37-120)||(41802106-41802191)
chr5 (42-95)||(2413954-2414007)
chr5 (42-95)||(9534897-9534950)
chr5 (40-118)||(24097873-24097953)
chr5 (37-120)||(29959879-29959965)
chr5 (37-117)||(13795591-13795673)
chr5 (38-120)||(33678155-33678240)
chr5 (37-95)||(479995-480053)
chr5 (38-100)||(35682119-35682181)
chr5 (39-120)||(36339169-36339253)
chr5 (37-119)||(2318747-2318831)
chr5 (38-117)||(8258395-8258477)
chr5 (37-73)||(13118851-13118887)
chr5 (41-120)||(25929560-25929642)
chr5 (37-119)||(27979014-27979099)
chr5 (37-120)||(29743895-29743981)
chr5 (37-95)||(37431670-37431731)
chr5 (42-120)||(38293623-38293704)
chr5 (37-95)||(3024483-3024541)
chr5 (38-76)||(8780127-8780165)
chr5 (41-120)||(16432976-16433057)
chr5 (41-83)||(32625607-32625649)
chr5 (37-118)||(33210372-33210456)
chr5 (45-95)||(36752539-36752589)
chr5 (37-71)||(42486926-42486960)
chr5 (41-120)||(42597801-42597882)
chr5 (38-95)||(38355038-38355095)
chr5 (38-71)||(40803371-40803404)
chr5 (37-73)||(3425841-3425877)
chr5 (39-120)||(29996510-29996593)
chr5 (40-92)||(32467073-32467125)
[»] chr3 (71 HSPs)
chr3 (40-117)||(29347584-29347663)
chr3 (40-120)||(11140247-11140329)
chr3 (40-120)||(42067579-42067661)
chr3 (40-120)||(44670582-44670664)
chr3 (40-120)||(29786921-29787003)
chr3 (40-120)||(38785406-38785488)
chr3 (40-120)||(42364251-42364333)
chr3 (37-120)||(876543-876628)
chr3 (40-120)||(27082670-27082752)
chr3 (40-120)||(35171517-35171599)
chr3 (40-120)||(45636089-45636171)
chr3 (41-120)||(31308877-31308958)
chr3 (37-120)||(26885292-26885378)
chr3 (40-120)||(39630214-39630297)
chr3 (40-95)||(40650094-40650149)
chr3 (40-120)||(44365621-44365703)
chr3 (37-120)||(4663459-4663544)
chr3 (37-120)||(27647478-27647563)
chr3 (40-120)||(42848530-42848614)
chr3 (37-117)||(7671806-7671888)
chr3 (38-120)||(9506903-9506988)
chr3 (38-120)||(9514878-9514963)
chr3 (48-120)||(27079711-27079785)
chr3 (37-121)||(28718248-28718334)
chr3 (41-121)||(47948720-47948802)
chr3 (37-120)||(19547489-19547574)
chr3 (37-120)||(21289134-21289219)
chr3 (37-120)||(25592327-25592412)
chr3 (37-118)||(40477759-40477843)
chr3 (41-120)||(26457280-26457362)
chr3 (41-120)||(29491663-29491745)
chr3 (37-73)||(36098921-36098957)
chr3 (42-120)||(42622609-42622691)
chr3 (41-120)||(44522023-44522105)
chr3 (37-95)||(25482564-25482622)
chr3 (41-95)||(34593720-34593774)
chr3 (37-95)||(40473862-40473920)
chr3 (39-120)||(42622172-42622256)
chr3 (37-120)||(43715069-43715154)
chr3 (37-120)||(53516902-53516987)
chr3 (37-111)||(32717662-32717738)
chr3 (37-73)||(10279320-10279356)
chr3 (37-73)||(23456504-23456540)
chr3 (37-120)||(26849924-26850010)
chr3 (40-117)||(31479559-31479638)
chr3 (37-73)||(45538965-45539001)
chr3 (37-73)||(51350953-51350989)
chr3 (41-117)||(3136273-3136351)
chr3 (38-120)||(7352489-7352574)
chr3 (37-123)||(16136943-16137032)
chr3 (42-120)||(40021079-40021160)
chr3 (37-71)||(15996872-15996906)
chr3 (37-71)||(33006351-33006385)
chr3 (39-73)||(46671387-46671421)
chr3 (37-118)||(50247226-50247310)
chr3 (41-95)||(50257827-50257881)
chr3 (37-83)||(51344414-51344460)
chr3 (41-83)||(52162436-52162478)
chr3 (37-117)||(1129449-1129532)
chr3 (37-121)||(29389018-29389105)
chr3 (53-94)||(47470456-47470497)
chr3 (37-70)||(50030072-50030105)
chr3 (37-70)||(54262854-54262887)
chr3 (37-73)||(4817331-4817367)
chr3 (37-120)||(8965915-8966001)
chr3 (37-73)||(41282855-41282891)
chr3 (41-73)||(46507677-46507709)
chr3 (37-73)||(47745877-47745913)
chr3 (41-118)||(51996743-51996822)
chr3 (37-73)||(54428545-54428581)
chr3 (37-73)||(54788406-54788442)
[»] chr8 (55 HSPs)
chr8 (40-120)||(37511088-37511170)
chr8 (40-120)||(945976-946058)
chr8 (40-120)||(14498627-14498709)
chr8 (40-120)||(28090192-28090274)
chr8 (40-120)||(29773445-29773527)
chr8 (40-120)||(36002356-36002438)
chr8 (41-121)||(2273009-2273091)
chr8 (37-120)||(19718672-19718757)
chr8 (37-120)||(17642074-17642159)
chr8 (40-95)||(10280587-10280642)
chr8 (40-120)||(15726214-15726296)
chr8 (40-120)||(23286565-23286647)
chr8 (40-120)||(29229501-29229583)
chr8 (40-120)||(38502184-38502266)
chr8 (37-123)||(37465681-37465769)
chr8 (40-118)||(44934901-44934981)
chr8 (40-120)||(34332112-34332194)
chr8 (37-118)||(1043060-1043144)
chr8 (37-120)||(16323559-16323644)
chr8 (37-120)||(42444539-42444624)
chr8 (37-120)||(43049537-43049621)
chr8 (37-120)||(43485362-43485447)
chr8 (37-120)||(529267-529352)
chr8 (41-95)||(23274649-23274703)
chr8 (41-120)||(37161504-37161585)
chr8 (37-120)||(26439844-26439930)
chr8 (41-120)||(29454534-29454616)
chr8 (39-117)||(40776941-40777022)
chr8 (38-121)||(4475045-4475129)
chr8 (41-120)||(6800097-6800178)
chr8 (41-118)||(34633865-34633945)
chr8 (41-120)||(39347455-39347536)
chr8 (40-118)||(12163267-12163347)
chr8 (40-118)||(12407695-12407775)
chr8 (41-117)||(29265920-29265999)
chr8 (40-122)||(29459631-29459715)
chr8 (37-120)||(4214816-4214902)
chr8 (37-120)||(6631226-6631312)
chr8 (48-84)||(11110404-11110440)
chr8 (37-73)||(36667283-36667319)
chr8 (37-120)||(37676258-37676344)
chr8 (41-120)||(5215646-5215727)
chr8 (37-71)||(15451769-15451803)
chr8 (37-95)||(17792231-17792289)
chr8 (37-118)||(26988708-26988792)
chr8 (39-73)||(39300411-39300445)
chr8 (42-120)||(13483222-13483302)
chr8 (39-95)||(34166233-34166287)
chr8 (40-73)||(40578743-40578776)
chr8 (41-117)||(41720250-41720329)
chr8 (37-120)||(2261029-2261115)
chr8 (37-73)||(26522287-26522323)
chr8 (37-73)||(27847559-27847595)
chr8 (41-120)||(36162190-36162272)
chr8 (37-73)||(45452707-45452743)
[»] chr2 (51 HSPs)
chr2 (40-124)||(6884155-6884241)
chr2 (37-120)||(12547364-12547449)
chr2 (40-118)||(34665573-34665653)
chr2 (37-120)||(6438496-6438580)
chr2 (40-117)||(11813521-11813600)
chr2 (40-120)||(58920-59002)
chr2 (40-120)||(4673926-4674008)
chr2 (40-120)||(5091997-5092079)
chr2 (40-120)||(11227627-11227709)
chr2 (40-120)||(14533146-14533228)
chr2 (37-120)||(6513585-6513670)
chr2 (40-118)||(5389525-5389605)
chr2 (40-120)||(3383511-3383593)
chr2 (40-120)||(42427895-42427977)
chr2 (37-120)||(37909379-37909464)
chr2 (37-120)||(11598114-11598200)
chr2 (37-118)||(36489360-36489443)
chr2 (41-120)||(1353507-1353586)
chr2 (37-95)||(5420254-5420312)
chr2 (37-118)||(30980882-30980966)
chr2 (41-121)||(1580566-1580649)
chr2 (37-74)||(35310153-35310190)
chr2 (40-92)||(37083238-37083290)
chr2 (37-120)||(45157530-45157616)
chr2 (40-120)||(15771634-15771716)
chr2 (37-120)||(20212475-20212559)
chr2 (41-120)||(34438511-34438592)
chr2 (41-120)||(38963389-38963470)
chr2 (41-120)||(42641176-42641257)
chr2 (37-121)||(6945339-6945426)
chr2 (40-118)||(8371890-8371970)
chr2 (37-70)||(37425535-37425568)
chr2 (41-121)||(39620190-39620273)
chr2 (37-98)||(40370489-40370550)
chr2 (37-125)||(40947084-40947175)
chr2 (37-73)||(9122477-9122513)
chr2 (40-118)||(33423338-33423420)
chr2 (41-120)||(11088216-11088297)
chr2 (206-260)||(14960031-14960085)
chr2 (37-95)||(19636419-19636477)
chr2 (37-95)||(19835012-19835070)
chr2 (39-73)||(34091745-34091779)
chr2 (38-124)||(37782170-37782259)
chr2 (37-120)||(38073427-38073512)
chr2 (42-71)||(3261014-3261043)
chr2 (37-73)||(4298222-4298258)
chr2 (37-73)||(9589163-9589199)
chr2 (37-120)||(17821531-17821617)
chr2 (55-120)||(32499150-32499217)
chr2 (41-120)||(33493930-33494012)
chr2 (37-73)||(42849648-42849684)
[»] chr6 (30 HSPs)
chr6 (40-118)||(2258905-2258985)
chr6 (40-120)||(6848510-6848592)
chr6 (40-120)||(8401740-8401822)
chr6 (37-120)||(11446736-11446821)
chr6 (41-110)||(24487612-24487683)
chr6 (40-120)||(1096221-1096303)
chr6 (40-120)||(13390385-13390467)
chr6 (40-120)||(24212912-24212994)
chr6 (40-120)||(26358877-26358959)
chr6 (40-120)||(32834098-32834180)
chr6 (40-118)||(17545607-17545687)
chr6 (37-120)||(8549875-8549961)
chr6 (37-120)||(9661752-9661838)
chr6 (40-120)||(4110551-4110633)
chr6 (37-117)||(30020679-30020761)
chr6 (37-120)||(4509430-4509516)
chr6 (37-120)||(16892903-16892989)
chr6 (37-119)||(13719112-13719197)
chr6 (37-83)||(243207-243253)
chr6 (37-120)||(6265255-6265340)
chr6 (37-120)||(15383525-15383610)
chr6 (42-95)||(4901275-4901328)
chr6 (37-90)||(17010393-17010446)
chr6 (37-120)||(9686776-9686862)
chr6 (39-73)||(529119-529153)
chr6 (37-83)||(11763494-11763540)
chr6 (37-119)||(8376345-8376429)
chr6 (41-117)||(35037559-35037636)
chr6 (37-73)||(4576435-4576471)
chr6 (37-73)||(33574048-33574084)
[»] scaffold0005 (1 HSPs)
scaffold0005 (40-120)||(36933-37015)
[»] scaffold0625 (1 HSPs)
scaffold0625 (37-120)||(6584-6669)
[»] scaffold0432 (1 HSPs)
scaffold0432 (37-122)||(3350-3438)
[»] scaffold0077 (1 HSPs)
scaffold0077 (40-95)||(48037-48092)
[»] scaffold0604 (1 HSPs)
scaffold0604 (37-118)||(2022-2105)
[»] scaffold0113 (1 HSPs)
scaffold0113 (37-110)||(29255-29330)
[»] scaffold0060 (1 HSPs)
scaffold0060 (41-120)||(45761-45843)
[»] scaffold0009 (1 HSPs)
scaffold0009 (37-119)||(214141-214225)
[»] scaffold0184 (1 HSPs)
scaffold0184 (41-120)||(16907-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (41-120)||(55855-55937)
[»] scaffold0008 (1 HSPs)
scaffold0008 (37-94)||(45136-45193)
[»] scaffold0775 (1 HSPs)
scaffold0775 (37-120)||(159-245)


Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 204 - 433
Target Start/End: Complemental strand, 38975193 - 38974964
Alignment:
Q  204 gcttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtgggcattatcttgtgtattgactcatccagaggtactagagacagc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38975193 gcttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtgggcattatcttgtgtattgactcatccagaggtactagagacggc 38975094  T
Q  304 aaggtatgaaatagaaagcaatgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacactt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38975093 aaggtatgaaatagaaagcaatgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacactt 38974994  T
Q  404 aggttgtacactcctgctccattgtcattg 433  Q
    ||||||||||||||||||||||||||||||    
T  38974993 aggttgtacactcctgctccattgtcattg 38974964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 38975356 - 38975260
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgccctaacattaaccattac 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38975356 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgcccaaacattaaccattac 38975260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 30342907 - 30342825
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||||||||||||| ||||||||    
T  30342907 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 51436138 - 51436221
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  51436138 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 51436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 3716407 - 3716325
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  3716407 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 27538997 - 27538915
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  27538997 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 41759985 - 41760067
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  41759985 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 36592357 - 36592437
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 116  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||  |||||||||||||||| ||||    
T  36592357 ttcaaaaaataactcatttaactattaatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 53389171 - 53389255
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||  | || | ||||||||||||||||||||    
T  53389171 caaaaaataactcatttaactattaatttaaagatttagtgtaccgatacactcaaattgtttgatgtaccatagaatttgccct 53389255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 14802794 - 14802712
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||  | ||| |||||||||||||||||||    
T  14802794 caaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 14802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 28037767 - 28037685
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||| |||||||||||||||    
T  28037767 caaaaagtaactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 28037685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 30539651 - 30539569
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  30539651 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 34280553 - 34280635
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  34280553 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 34280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 56361634 - 56361717
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| ||||||||||| |||  ||||| |||||||||||||    
T  56361634 cttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcaaatttttgtgtaacatagaatttgcc 56361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 9858329 - 9858244
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||  |||||||||| || ||||||||||| ||||||||||||    
T  9858329 cttcaaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtactatagaatttgcc 9858244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 31908528 - 31908443
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| || ||||||||||||||||||| ||||| |||||| |||||||||| || |||||||||| |||||||||||||    
T  31908528 cttcaaaaaatcacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtatcatagaatttgcc 31908443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 36091144 - 36091059
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||| ||||||||| ||||||||    
T  36091144 cttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgcc 36091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 52589153 - 52589077
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 114  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||    
T  52589153 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaa 52589077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 43137689 - 43137771
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  43137689 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 43137771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 46041783 - 46041728
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  46041783 caaaaaataactcatttaactattaatttaaagatttggtgtatcaatacactcaa 46041728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 29646709 - 29646624
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||| |||||||||  |||||| | ||||||||||||||||||    
T  29646709 cttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaaatttttgatgtaccatagaatttgcc 29646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 48579234 - 48579315
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||  | |||| ||||||||| ||||||||    
T  48579234 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcc 48579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 52809269 - 52809350
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||  |||||| |||||||||||  | |||| |||||||||| |||||||    
T  52809269 aaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgcc 52809350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 18425455 - 18425524
Alignment:
Q  53 atttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||| ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  18425455 atttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 26117832 - 26117742
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccctaa 124  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||| |||||||||   || |||| ||||||||| |||||| |||||    
T  26117832 cttcaaaaaacaactcatttaactattaatttaaagaatgagtgtactgatacactcaaatatattggatgtaccataaaatttgtcctaa 26117742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 53936833 - 53936919
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  53936833 cttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 37855203 - 37855148
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||    
T  37855203 caaaaaataactcatttaactattaatttaaggatttggtgtacctatacactcaa 37855148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 19842519 - 19842438
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||||||||| |||||||||||  |||| |||||||  |||||||||  |||||| ||||||||||||||||||    
T  19842519 aaaaaaaaactcatttaattattaatttaacaatttggtgtactggtacactcaaatttttggatgtaccatagaatttgcc 19842438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 39162126 - 39162207
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 116  Q
    |||||||||||||| ||||||||||||||||||  || || |||||| ||||||| |||  ||||| |||||||||||||||    
T  39162126 cttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaatttttgagtgtaccatagaatt 39162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 46216093 - 46216178
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||| |||||||||   ||||  |||||| |||||||||||  |||||||||||| ||||||||||||    
T  46216093 cttcaaaaaataacacatttaattattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtacaatagaatttgcc 46216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 48647344 - 48647428
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||| |||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  48647344 tcaaaaaataactcatttaactattaatctaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 48647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 8256547 - 8256490
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||| |||||||||    
T  8256547 ttcaaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaa 8256490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 8269965 - 8269908
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||| |||||||||    
T  8269965 ttcaaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaa 8269908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 9356703 - 9356789
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||||| |   | ||| |||||||| |   || |||||||||||||||||||||||    
T  9356703 cttcaaaaaacaactcatttaactattaatttaaagactgaatttaccaatacactaaaatatattgggtgtaccatagaatttgcc 9356789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 32570453 - 32570370
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttg 118  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||| ||   |||||||  |||||||| ||||||||||||||||    
T  32570453 cttcaaaaaataactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttggatgtaccatagaatttg 32570370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 38835932 - 38835854
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||| |||||||||||||||||||||||  ||||  ||||| |||||||||||  | || ||||||||||||||||||    
T  38835932 aaaaaaaactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttg 38835854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 47302481 - 47302399
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||| |||||    
T  47302481 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccataaaattt 47302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 48066329 - 48066411
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| | ||| |||||||||||||| ||||| || ||| ||||||||||| |  |||| ||||||||||||||||||    
T  48066329 caaaaaataatttattgaactattaatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcc 48066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 55722558 - 55722503
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||| ||||    
T  55722558 caaaaaataactcaattaactattaatttaaggatttagtgtaccaatacattcaa 55722503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6807319 - 6807400
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||| |||| |||||| ||||||||||| | ||| ||||||| ||||| ||  ||| |||||||||||||||||||||||    
T  6807319 aaaaaacaactaatttaattattaatttaatgttttggtgtactgatacattcaaaatgttgggtgtaccatagaatttgcc 6807400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 31681422 - 31681337
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||| ||||||||| || |||||||||||||||  ||||| |||||| |||||||  ||  |||| ||||||||||||||||||||    
T  31681422 cttcgaaaaataacacacttaactattaatttattgatttggtgtaccaatacaccaaaatttttaggtgtaccatagaatttgcc 31681337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 49625064 - 49625006
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| ||||||||||||||| ||| || ||||||||| |||||||||||| ||||    
T  49625064 cttcaaaatataactcatttaactgttacttgaaagattttatgtactaatacagtcaa 49625006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 1414426 - 1414478
Alignment:
Q  43 aaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||| ||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  1414426 aaaaaaacacatttaactattaatttaatgatttggtgtaccaatacactcaa 1414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 8749409 - 8749330
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||| | |||||| ||  |||||| | ||||||||||||||    
T  8749409 aaaaaacaactcatttaattattaatttaacgatttagtgtacgagtacacttaattttttggatataccatagaatttg 8749330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 23059095 - 23059173
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    ||||| |||||||||||| ||||||||||||| |  ||||||  |||||||||   || ||||||||||||||||||||    
T  23059095 aaaaacaactcatttaacgattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 38955625 - 38955729
Alignment:
Q  324 atgtaggtcaagaccgtttgttggatgaatctgacctaccaaaactcccttaccttaaaaatatcatctatgagacacttaggttgtacactcctgctcc 423  Q
    ||||||| ||||| |||||| | |||||||| ||||| || |||||  ||||||| | |||| | ||||| ||||| ||| | ||||| |||||||||||    
T  38955625 atgtaggacaagatcgtttggttgatgaatcagaccttccgaaactaacttacctaagaaatgttatctacgagacccttcgattgtatactcctgctcc 38955724  T
Q  424 attgt 428  Q
    |||||    
T  38955725 attgt 38955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 43363413 - 43363377
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||||||||||||||    
T  43363413 cttcaaaaaacaactcatttaactattaatttaaaga 43363377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 50383650 - 50383686
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||||||||||||||    
T  50383650 cttcaaaaaacaactcatttaactattaatttaaaga 50383686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 24566685 - 24566771
Alignment:
Q  37 cttcaaaaaat-aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| ||||||||||| ||||| |||||  | || ||||| | ||||||||||  |||| ||||||||||||||||||||    
T  24566685 cttcaaaaaatcaactcatttaattattattttaacaaattggtgtattgatacactcaaatttttaggtgtaccatagaatttgcc 24566771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 37519288 - 37519370
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||| |||||||||||||| | | | |||||| |||||| |||| |  |||||| ||||||||||||||||    
T  37519288 caaaaaataattcattgaactattaatttaatggtatggtgtaccaatacattcaaatgattgggtataccatagaatttgcc 37519370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 37523504 - 37523586
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||| |||||||||||||| | | | |||||| |||||| |||| |  |||||| ||||||||||||||||    
T  37523504 caaaaaataattcattgaactattaatttaatggtatggtgtaccaatacattcaaatgattgggtataccatagaatttgcc 37523586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 38961289 - 38961367
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||| |||||||||||   ||||||||| ||||| ||||||  ||||| ||||  ||||||||||||||||||||||    
T  38961289 aaaaaaaaactcatttaatgtttaatttaacgatttggtgtaccgatacaatcaaaattttgggtgtaccatagaattt 38961367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 48262646 - 48262565
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaattt 117  Q
    ||||||||||||||| |||||| ||||||||||| | ||| ||||||  ||||||||  ||||||  ||||||||||||||||    
T  48262646 cttcaaaaaataactaatttaattattaatttaatg-tttggtgtaccgatacactcaaaattttaagtgtaccatagaattt 48262565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 24980262 - 24980346
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||||||| ||||| |||||||||||||||||||| |  |||||    ||||||||   || |||||||||||||||||||||    
T  24980262 cttcaaaaaacaactcttttaactattaatttaaagagtgggtgtatcggtacactcaaatatattgggtgtaccatagaatttg 24980346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 46004645 - 46004726
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 116  Q
    |||||||||||||| ||||| || |||||| ||   |||| |||||| |||||||||||  |||||| ||||||||||||||    
T  46004645 cttcaaaaaataacacattttacgattaatatattaatttggtgtaccaatacactcaaatttttggatgtaccatagaatt 46004726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 33491482 - 33491569
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 121  Q
    |||||||||| |||| |||||||||||||||||||||    ||||||   ||||||||   || |||| |||||||||||||||||||    
T  33491482 cttcaaaaaacaacttatttaactattaatttaaagagcgggtgtaccggtacactcaaatatattggatgtaccatagaatttgccc 33491569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 52607891 - 52607924
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||| |||||||||||||||||||||||    
T  52607891 cttcaaaaaacaactcatttaactattaatttaa 52607924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 352793 - 352829
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||| |||||||||||||||||||||    
T  352793 cttcaaaaaagaacttatttaactattaatttaaaga 352829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 4720570 - 4720538
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||| ||||||||||    
T  4720570 aaaaaataactcatttaactatgaatttaaaga 4720538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 24292063 - 24291978
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||  ||||||||| | || || |||||| ||||||| ||| |||   |||||||||||||||||||||    
T  24292063 cttcaaaaaacaactcatttat-tattaattttacgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 24535806 - 24535842
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  24535806 cttcaaaaaacaactcatttaactatgaatttaaaga 24535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 32845974 - 32846060
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||  |||||||||||||| |  ||| || | ||||||||   || |||| ||||||||||||||||||    
T  32845974 cttcaaaaaacaactcatttatttattaatttaaagaatgagtggaccagtacactcaaatatattggatgtaccatagaatttgcc 32846060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 34828808 - 34828772
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  34828808 cttcaaaaaacaactcatttaactgttaatttaaaga 34828772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 36631355 - 36631391
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||||||||||| |||||||||||||    
T  36631355 cttcaaaaaacaactcatttaaccattaatttaaaga 36631391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 38955516 - 38955560
Alignment:
Q  215 atgcttcttgctggaacagactcatcagctgtaacattagagtgg 259  Q
    ||||| ||||||||||| |||||||| || |||||||||||||||    
T  38955516 atgctccttgctggaacggactcatctgccgtaacattagagtgg 38955560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 42177661 - 42177697
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||||||||||| |||||||||||||    
T  42177661 cttcaaaaaacaactcatttaaccattaatttaaaga 42177697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 43147574 - 43147542
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaaga 73  Q
    |||||| ||||||||||||||||||||||||||    
T  43147574 aaaaaacaactcatttaactattaatttaaaga 43147542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 50607766 - 50607684
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||||||||||||| ||||||||    
T  50607766 aaaaaacaactcatttaaccattaatttaaagagtgcgtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 50607684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 50775860 - 50775824
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||||||||||| |||||||||||||    
T  50775860 cttcaaaaaacaactcatttaaccattaatttaaaga 50775824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 51944521 - 51944435
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||  ||| || ||||||| || |||||| | ||||||||| |   ||||||||||| |||||||||||    
T  51944521 cttcaaaaaacaactcatttacatataaaattaaagaattggtgtaccagtacactcaaatatgttgggtgtaccgtagaatttgcc 51944435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 54506193 - 54506229
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  54506193 cttcaaaaaacaactcatttaactatgaatttaaaga 54506229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 54996183 - 54996147
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  54996183 cttcaaaaaacaactcatttaattattaatttaaaga 54996147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 27295140 - 27295057
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  27295140 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 27295057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 922166 - 922249
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||||||    
T  922166 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccc 922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 41073352 - 41073270
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  41073352 caaaaaataattcatttaactattaatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 41073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 51781428 - 51781507
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  51781428 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 16482658 - 16482576
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||||||||||||    
T  16482658 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 8461850 - 8461942
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgccctaacattaa 130  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| |||||||||||| ||||| ||| |||||    
T  8461850 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgccataaaattaa 8461942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 50905663 - 50905580
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||  | ||||||||||||||||| ||||||    
T  50905663 caaaaaataactcatttaactattaatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgccc 50905580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 18641970 - 18641888
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  18641970 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 18641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 28493892 - 28493810
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||  | |||||||||||||||||||||||    
T  28493892 caaaaaataactcatttaactattaatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgcc 28493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 31931022 - 31931104
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||| ||||||||||||||||||    
T  31931022 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgcc 31931104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 35305233 - 35305151
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  35305233 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 35305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 23304488 - 23304407
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||||||||  |  ||||||||||||||||| ||||||    
T  23304488 aaaaaataacacatttaactattaatttaatgattttgtgtaccaatacactcgtatctttgggtgtaccatagattttgcc 23304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 9166957 - 9166873
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||| ||||||||||||||||||  ||||| |||||| |||||||||||  |||||||||||| ||| ||||||||    
T  9166957 ttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgcc 9166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 51519864 - 51519788
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 114  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||    
T  51519864 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 51519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 51985016 - 51984936
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||  | ||| |||||||||||||||||    
T  51985016 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 2247152 - 2247069
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||| | ||||||||||||||||||| ||||| |||||| |||||||||||   ||| ||||||||||||||||||    
T  2247152 cttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 35874259 - 35874345
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| ||||||||||||||||||||| |  |||||| ||||||||||   || |||||||||||||||||||||||    
T  35874259 cttcaaaaaacaacttatttaactattaatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcc 35874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 5956851 - 5956933
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||| |||  |||||| |||||||| ||  | |||||||||||||| ||||||||    
T  5956851 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 5956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 26102794 - 26102876
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||  | ||| ||||||||||||||||    
T  26102794 cttcaaaaaataactcatttaactattaatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 37498826 - 37498744
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  37498826 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 37498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 38717839 - 38717754
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  38717839 ttcaaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 38717754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 39190881 - 39190963
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| |||||||||||| |||||    
T  39190881 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcc 39190963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 45423691 - 45423609
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||| |||||||||||| |||||    
T  45423691 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcc 45423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 46771056 - 46771138
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||  | || |||||||||||||| |||||    
T  46771056 caaaaaataactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgcc 46771138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 48760210 - 48760125
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||| | ||||||||||||| |||||||||| || |||||||||||||||||   ||  ||||||||||||||||||||||    
T  48760210 ttcaaaaaacagctcatttaactatgaatttaaagagttagtgtactaatacactcaaatatagtgggtgtaccatagaatttgcc 48760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 632969 - 633054
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  632969 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 633054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 42317147 - 42317232
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgccc 121  Q
    ||||||||||||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| |||||||||| |||||||||    
T  42317147 ttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatataatttgccc 42317232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 44246322 - 44246403
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgc 119  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||  | |||||| | |||||||||||||||    
T  44246322 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 52303094 - 52303013
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||  ||||  ||||| |||||||||||  | ||||||||| |||||||||||||    
T  52303094 aaaaaataactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcc 52303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 48616773 - 48616853
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||| ||||||||||||||||||  ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  48616773 aaaaataacacatttaactattaatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 48616853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 50239555 - 50239612
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca 94  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||    
T  50239555 cttcaaaaaataacacatttaactattaatttaatgatttagtgtaccaatacactca 50239612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 477755 - 477841
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  477755 cttcaaaaaacaactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 11778957 - 11779040
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||  ||||||||||||||||||| |||||  ||||| |||||||||||   ||||||||||||||| ||||||    
T  11778957 cttcaaaaaataaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 34038485 - 34038571
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||| | |  |||||| ||||||||||   || |||| ||||||||||||||||||    
T  34038485 cttcaaaaaacaactcatttaactattaatttaaaaagtgagtgtaccaatacactcaaatatattggatgtaccatagaatttgcc 34038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 51184123 - 51184044
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||  ||||||||||||||||||| |||||  ||||| |||||||||||   ||||||||||||||||||||||    
T  51184123 aaaaaataaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 6966017 - 6965932
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||| ||||||||||||||| || ||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  6966017 ttcaaaaaacaactcatttaactatgaaattaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 6965932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 29106688 - 29106731
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  29106688 caaaaaataactcatttaactattaatttaaagatttggtgtac 29106731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 30263903 - 30263987
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||||||| |||||||||||||||||||||||||| || |||||    ||||||||   || |||||||||||||||||||||    
T  30263903 cttcaaaaaacaactcatttaactattaatttaaagaattggtgtatgggtacactcaaatatattgggtgtaccatagaatttg 30263987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 23056847 - 23056795
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacact 92  Q
    |||||||||||||||||||||||||||||||| |||  |||||| ||||||||    
T  23056847 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacact 23056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 24381398 - 24381316
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||| |  ||||||   |||||||||   | || ||||||||||||||||||||    
T  24381398 aaaaaataactcatttaactattaatttaaagagtgagtgtaccggtacactcaaatctattaggtgtaccatagaatttgcc 24381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 26011263 - 26011346
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||  |||||||||||  |||||||||||||||| ||||||    
T  26011263 cttcaaaaaataacacatttaactattaatttgttgattgggtgtatcaatacactcaaatttttgggtgtaccataaaatttg 26011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 33098982 - 33099034
Alignment:
Q  43 aaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| ||||||||||||||||||  |||||||||||| |||||||||||    
T  33098982 aaaataacacatttaactattaatttattgattttgtgtaccaatacactcaa 33099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 34256532 - 34256453
Alignment:
Q  43 aaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||| |||||||||||  |||| ||||||  ||||||||||  | |||||||||||||||||||||||    
T  34256532 aaaataactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcc 34256453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 44263728 - 44263646
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||||||||||||||||||||||||    |||||  ||||||||||   || |||||||||||||||||||||||    
T  44263728 aaaaaacaactcatttaactattaatttaaagagcgagtgtatcaatacactcaaatatattgggtgtaccatagaatttgcc 44263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 51787789 - 51787875
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||| ||||||||||||||||||    
T  51787789 cttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 51787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 27352932 - 27352850
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||| |||| |||||||||||||||| ||  ||||||||||  |||||||||||   ||||| |||||||||||||||    
T  27352932 cttcaaaaactaacacatttaactattaattcaataattttgtgtatcaatacactcaaatctttggatgtaccatagaattt 27352850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 38262458 - 38262513
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||| ||||||||||  |||| |||||| |||||||||||    
T  38262458 caaaaaataactcatttaacaattaatttaagaatttggtgtaccaatacactcaa 38262513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 39971593 - 39971648
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||||||||||||  |||| || ||| |||||||||||    
T  39971593 caaaaaataactcatttaactattaatttaagaatttggtataccaatacactcaa 39971648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 12227202 - 12227121
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| |||| |||||| ||||||||||| | ||| |||||||  |||||||||  | |||||||||||||||||||||||    
T  12227202 aaaaaacaactaatttaattattaatttaatgctttggtgtactggtacactcaaaatgttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 31530633 - 31530719
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-----attttgggtgtaccatagaatttgc 119  Q
    ||||||||||||||| |||||||||||||||||||| |  ||||||   ||||||||     ||||||||||||||||| |||||||    
T  31530633 ttcaaaaaataactcttttaactattaatttaaagagtgagtgtaccgttacactcaaatatattttgggtgtaccataaaatttgc 31530719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 52260898 - 52260817
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaat--tttgggtgtaccatagaatt 116  Q
    |||||||| ||||| ||||||||||||||||||  ||||| |||||| |||||| |||||  |||| |||||||||| ||||    
T  52260898 cttcaaaagataacacatttaactattaatttattgatttggtgtaccaatacattcaattctttgagtgtaccatataatt 52260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6234301 - 6234386
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacac-tcaatttt-gggtgtaccatagaatttgcc 120  Q
    |||||||||| |||  |||||  ||||||||||||||||| |||||  ||||||| ||||||||  ||||||||||||||||||||    
T  6234301 cttcaaaaaacaacatatttacatattaatttaaagatttggtgtagcaatacacttcaattttcaggtgtaccatagaatttgcc 6234386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 52345926 - 52346005
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    |||||| |||||||||||||||||||||||||| |  |||||||  ||||||||   || |||||||||| |||||||||    
T  52345926 aaaaaacaactcatttaactattaatttaaagagtgggtgtactggtacactcaaatatattgggtgtacaatagaattt 52346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 2249891 - 2249973
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||| |||||||||| |  || ||| ||||||||||| | |   || ||||||||||||||||||    
T  2249891 aaaaaataactcatttaactatgaatttaaagagtgagtataccaatacactcaaatatagtggatgtaccatagaatttgcc 2249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 2620731 - 2620648
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| |||| |  |||  |||| | ||||||||||||||||    
T  2620731 cttcaaaaaataacacatttaactattaatttattgatttagtgtaccaatatatccaaatttttagatgtaccatagaatttg 2620648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 7122040 - 7121957
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||| ||  ||||||||||||||||||| |||||  ||||| |||||||||||   ||| ||| ||||||||||||||||    
T  7122040 tcaaaaaacaaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgcc 7121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 12105484 - 12105566
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||| |||||||||||||||||||| |  ||||| |  ||||||||   || |||||||||||||||||||||||    
T  12105484 aaaaaacaactcttttaactattaatttaaagagtgggtgtattggtacactcaaatatattgggtgtaccatagaatttgcc 12105566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 17554142 - 17554224
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  17554142 aaaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 17554224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 21072860 - 21072824
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  21072860 cttcaaaaaataacttatttaactattaatttaaaga 21072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 31821903 - 31821939
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31821903 cttcaaaaaataactcatttaactatgaatttaaaga 31821939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 32144989 - 32145075
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc---aattttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||   |||||||   ||| ||||||||||  |||||||||||    
T  32144989 cttcaaaaaataactcatttaactataaatttaaggatttgatgtaccggtacactcaaaaatgttgggtgtacggtagaatttgcc 32145075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 45622805 - 45622891
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    ||||||||||||||| |||||||||| |||||||||| |  |||||||  ||||||||| | |   || ||||||||||||||||||    
T  45622805 cttcaaaaaataacttatttaactatgaatttaaagagtgagtgtactggtacactcaaatatagtggatgtaccatagaatttgcc 45622891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 48977197 - 48977283
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| ||||||||||||||||||||| |  ||||||   ||||||||   || ||| |||||||||||||||||||    
T  48977197 cttcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 48977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 49616148 - 49616180
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||||||||||||||||||||||||||    
T  49616148 ttcaaaaaataactcatttaactattaatttaa 49616180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 51056282 - 51056246
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  51056282 cttcaaaaaataacttatttaactattaatttaaaga 51056246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 6520310 - 6520364
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||| ||||||||||||||||||||| |||   ||||| |||||||||||    
T  6520310 aaaaaataattcatttaactattaatttaaaaattcgatgtaccaatacactcaa 6520364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 25702780 - 25702814
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||||| ||||||    
T  25702780 tcaaaaaataactcatttaactattaatctaaaga 25702814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 28791689 - 28791774
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   || || |||||| ||||||| |||  ||||| ||||||| || ||||||||    
T  28791689 cttcaaaaaataacacatttaactattaatttgttgacttggtgtaccaatacacccaaatttttgagtgtaccgtaaaatttgcc 28791774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 29953926 - 29954006
Alignment:
Q  43 aaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||   ||||||||   ||||||| |||||||||| |||||||    
T  29953926 aaaaaaactcatttaactattaatataaggatttggtgtaccggtacactcaaatattttggatgtaccatagtatttgcc 29954006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 33985996 - 33985911
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| |||||| |||||||||||| |||| ||| || | |||||||  |||||||  ||||||||| ||||||||    
T  33985996 cttcaaaaaacaactaatttaattattaatttaaatatttggtgcaccagtacactcaaaattttgaatgtaccataaaatttgcc 33985911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 35910247 - 35910193
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacac 91  Q
    |||||||||||||| ||||||||||||||||||  || || |||||| |||||||    
T  35910247 cttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacac 35910193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 44978950 - 44978869
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttgcc 120  Q
    |||||| ||||| ||||| |||||||||||  |||| ||||||   ||||||||| ||  ||||||||||||||||||||||    
T  44978950 aaaaaaaaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 17525522 - 17525489
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||||||||||||||||||| |||||||    
T  17525522 cttcaaaaaataactcatttaactataaatttaa 17525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 36275039 - 36275096
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||| |||||||||| |||||||  ||||| || || ||||||||||||    
T  36275039 ttcaaaaaataacacatttaactactaatttattgatttggtatattaatacactcaa 36275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 43306611 - 43306582
Alignment:
Q  40 caaaaaataactcatttaactattaattta 69  Q
    ||||||||||||||||||||||||||||||    
T  43306611 caaaaaataactcatttaactattaattta 43306582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 45809529 - 45809496
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||||||||||||||||||| |||||||    
T  45809529 cttcaaaaaataactcatttaactataaatttaa 45809496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 7227881 - 7227913
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||||||| |||||||||||||    
T  7227881 aaaaaataactcatttaaccattaatttaaaga 7227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 9223181 - 9223262
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||  ||||||||| | ||||| ||||||  |||||| ||| |||   |||||||||||||||||||||    
T  9223181 aaaaaataactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 38260888 - 38260852
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||| |||||||||||||||||||||    
T  38260888 cttcaaaaaacaacttatttaactattaatttaaaga 38260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 47209131 - 47209044
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 122  Q
    |||||||||  |||| |||||| ||||| |||||  | || ||||| | ||||||||||  |||||||||||||||||||||| ||||    
T  47209131 cttcaaaaatcaacttatttaattattattttaacaaattggtgtattgatacactcaaatttttgggtgtaccatagaattttccct 47209044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 47693292 - 47693256
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  47693292 cttcaaaaaacaactcttttaactattaatttaaaga 47693256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 50631913 - 50631996
Alignment:
Q  37 cttcaaaaaat-aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||||| ||||||||||| ||||||||||| | ||| ||||||   |||||||||  | ||||||||||||| ||||||    
T  50631913 cttcaaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaattattgggtgtaccatggaattt 50631996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 40941957 - 40941877
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||| |||||||||||||||||    
T  40941957 caaaaaataactcatttaactattaatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaatttg 40941877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 45857795 - 45857880
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  45857795 cttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 45857880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 3910010 - 3909928
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||| |||  |||||| |||||||||||  | |||||||||||||||||||||||    
T  3910010 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 3909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 30624047 - 30624129
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  30624047 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgcc 30624129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 11486081 - 11485994
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 122  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| || ||   ||||||||||||||||||||||||||    
T  11486081 cttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatactcttaaatctttgggtgtaccatagaatttgccct 11485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 30862871 - 30862789
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  30862871 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 38129709 - 38129791
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  | |||||| |||||||||| |||||    
T  38129709 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcc 38129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 18990176 - 18990091
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||||||||||||    
T  18990176 cttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 30936413 - 30936495
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 117  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||| ||||||||||    
T  30936413 cttcaaaaaatcacacatttaactattaatttaatgattttgtgtaccaatacactcatatctttgggtgtatcatagaattt 30936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 1691315 - 1691394
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaattt 117  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||| |  |||| |||||||||||||||    
T  1691315 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 27956460 - 27956377
Alignment:
Q  40 caaaaaataactcatttaactattaa-tttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||  | || ||||||||||||||||||||    
T  27956460 caaaaaataactcatttaactattaattttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcc 27956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 28326763 - 28326684
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||| |||||||||    
T  28326763 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 21699613 - 21699691
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 116  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||||||||    
T  21699613 caaaaaatgactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaatt 21699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 41381579 - 41381497
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||  | || ||||||||||| ||||||||    
T  41381579 caaaaaataactcatttaactattactttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgcc 41381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 41913418 - 41913500
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||| ||||||||    
T  41913418 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgcc 41913500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 42974978 - 42974895
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||| |||||||| ||||| |||||| ||| |||||| || ||||||||||||||||||||||||    
T  42974978 tcaaaaaataacacatttaactactaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 43750160 - 43750075
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  43750160 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 43750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 30076741 - 30076659
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||||||||||||| |||||||||| || |||||||| ||||||||   ||  ||||||||||||||||||||||    
T  30076741 aaaaaaaaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 30076659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 41331811 - 41331756
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| |||||||||||    
T  41331811 caaaaaataactcatttaactattgatttaaggatttggtgtaccaatacactcaa 41331756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 47748123 - 47748205
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||||||||||||||||||||||| || || || ||| |||||| ||||  |||| ||||||||||| |||||    
T  47748123 cttcaaaaaataactcatttaactattaatttaaggacttggtataccaatacattcaaatttttaggtgtaccataaaattt 47748205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6791762 - 6791844
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  6791762 aaaaaacaactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 41809287 - 41809204
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttg 118  Q
    |||||||||||||  |||||||||| |||||||| ||||| |||||| |||||||||  ||||||  ||||||| |||||||||    
T  41809287 cttcaaaaaataatacatttaactactaatttaatgatttggtgtaccaatacactcaaaatttttagtgtaccgtagaatttg 41809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 41968747 - 41968829
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||  |||||||||   || || ||||||||||||||||||||    
T  41968747 aaaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattaggtgtaccatagaatttgcc 41968829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 42711013 - 42710931
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| ||| |||| ||  | || | ||||||||||||||||||    
T  42711013 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgcc 42710931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 23331784 - 23331700
Alignment:
Q  40 caaaaaataactcatttaactatta--atttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||  |||||| ||||| |||||| |||||||||||  | ||  |||||||||||||||||||    
T  23331784 caaaaaataattcatttaactattataatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcc 23331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 30317280 - 30317226
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacac 91  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| |||||||    
T  30317280 cttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacac 30317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 31482459 - 31482378
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatt 116  Q
    ||||||||| |||  |||||||||||||||| || ||||| |||||| |||||||||||   |||| |||||||||||||||    
T  31482459 cttcaaaaactaatacatttaactattaattcaatgatttggtgtaccaatacactcaaatatttgagtgtaccatagaatt 31482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 3214604 - 3214521
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    ||||||||||||||| ||||||||||||||||||||| |  |||||||  |||||| |   || |||||||||||||| |||||    
T  3214604 cttcaaaaaataacttatttaactattaatttaaagagtaggtgtactggtacacttaaatatattgggtgtaccatataattt 3214521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 15715990 - 15715904
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  ||||||||||||||||||||||    
T  15715990 cttcaaaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 15715904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 24953249 - 24953335
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  ||||||||||||||||||||||    
T  24953249 cttcaaaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 24953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 28265074 - 28265110
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28265074 cttcaaaaaataactcatttaactatgaatttaaaga 28265110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 30891360 - 30891278
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||||||||| ||||||||||||| |  |||||| | ||||||||   || |||| ||||||||||||||||||    
T  30891360 aaaaaacaactcatttaaccattaatttaaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaatttgcc 30891278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 35357787 - 35357701
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||| ||||||||||||||||||    
T  35357787 cttcaaaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 35357701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 45458761 - 45458695
Alignment:
Q  59 ctattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttgcccta 123  Q
    |||||||||||| ||||| |||||| |||||||| || ||  |||||||| ||||||||||||||||    
T  45458761 ctattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgcccta 45458695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 1269324 - 1269358
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa 71  Q
    |||||||||| ||||||||||||||||||||||||    
T  1269324 cttcaaaaaacaactcatttaactattaatttaaa 1269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 8159952 - 8160006
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||| |||||| |||||||||| || ||| | |||||||||    
T  8159952 aaaaaataactcatttaattattaaattaaagatttggtataccagtacactcaa 8160006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 32529502 - 32529560
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| | |||||||||||| ||||||||||||| |  ||||||| ||||||||||    
T  32529502 cttcaaaatacaactcatttaaccattaatttaaagagtaggtgtactgatacactcaa 32529560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 44964158 - 44964227
Alignment:
Q  53 atttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||| |||||  ||||| |||||||||||   ||| ||||||||||| ||||||||    
T  44964158 atttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 1806567 - 1806484
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    |||||||||| |||| ||||||||||||||||||||| |  ||||||   ||||||||   || ||| ||||||||||||||||    
T  1806567 cttcaaaaaacaacttatttaactattaatttaaagagtaggtgtaccggtacactcaaatatattgagtgtaccatagaattt 1806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 8770695 - 8770770
Alignment:
Q  46 ataactcatttaactattaatttaaagattttgtgtactaatacactcaat--tttgggtgtaccatagaatttgcc 120  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||| | |||  |||| ||||| |||||||||||||    
T  8770695 ataacacatttaactattaatttaatgatttggtgtaccaatacagttaattctttgtgtgta-catagaatttgcc 8770770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18520000 - 18519964
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  18520000 cttcaaaaaacaactcatttaactatgaatttaaaga 18519964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 23608312 - 23608398
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||| |||| || ||||||  || |||||| | ||||||||| |   ||||||||||| |||||||||||    
T  23608312 cttcaaaaaacaactcatttatctataaaattaaagggttagtgtaccagtacactcaaatatgttgggtgtaccgtagaatttgcc 23608398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 35291647 - 35291683
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||||||||||| |||||||||||||    
T  35291647 cttcaaaaaacaactcatttaaccattaatttaaaga 35291683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 43069160 - 43069080
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| |||||  ||||||||||||  |||| |||||| |||||||||||   ||| ||||||||||| ||||||||    
T  43069160 caaaaaataacacattt--ctattaatttaataatttggtgtaccaatacactcaagtctttaggtgtaccataaaatttgcc 43069080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 47220041 - 47219956
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||  ||||||||| | ||||| ||||||  |||||| ||| |||   |||||||||||||||||||||    
T  47220041 cttcaaaaaaaaactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 21605729 - 21605650
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  21605729 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 6560908 - 6560828
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  6560908 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 1662018 - 1662100
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||  | ||||||||||||||||| |||||    
T  1662018 caaaaaataacccatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 1662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 43237677 - 43237759
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  43237677 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 34302727 - 34302646
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||||||||||||||||||||||    
T  34302727 aaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 6114098 - 6114180
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||  | |||| ||||||||||||||||||    
T  6114098 caaaaaataactcatttaactattaatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcc 6114180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 6532661 - 6532579
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||  | |||||||||||||||||||||||    
T  6532661 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgcc 6532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 3056467 - 3056386
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgc 119  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||  | ||||||||||||||||| ||||    
T  3056467 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgc 3056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 13090999 - 13090917
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 117  Q
    |||||||||||||| |||||||||||||||||||  |||| |||||| |||||||||| || |||||||||||||||||||||    
T  13090999 cttcaaaaaataacacatttaactattaatttaataatttggtgtaccaatacactcatatctttgggtgtaccatagaattt 13090917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 9589294 - 9589209
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||| ||||| |||| | |||||||||| || ||||||||||||||||||||||||    
T  9589294 cttcaaaaaataacatatttaactattaatttaatgatttggtgtgccaatacactcatatctttgggtgtaccatagaatttgcc 9589209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 28332206 - 28332120
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||| |||||| |||||||||||   ||||| |||||||||||||||||||    
T  28332206 cttcaaaaaataacacatttaactattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 42917199 - 42917117
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||||||||||||||||||||||  |||| |||||| |||||||||||  | ||||||| |||||||||||||||    
T  42917199 caaaaagtaactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 4618033 - 4618118
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||| ||||||||    
T  4618033 cttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcc 4618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 14967313 - 14967235
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaattt 117  Q
    |||||||||| |||||||||| |||||||| ||||| |||||| |||||||||| || |||||||||||||||||||||    
T  14967313 aaaaaataacacatttaactactaatttaatgatttagtgtaccaatacactcatatctttgggtgtaccatagaattt 14967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 35162436 - 35162351
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||| | |||||| ||  |||||||||||||||| | ||||||    
T  35162436 cttcaaaaaaaaactcatttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgcc 35162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 18228783 - 18228859
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaa 114  Q
    ||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||  | || ||||||||||||||    
T  18228783 caaaaaataactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaa 18228859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 2029435 - 2029383
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacact 92  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  2029435 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacact 2029383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 13410624 - 13410545
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||| |||||    
T  13410624 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccataaaattt 13410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 35817669 - 35817744
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccat 110  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||  |||||||||||  |||||| ||||||||    
T  35817669 cttcaaaaaataactcatttaactattaatttaaaattttggtgtatcaatacactcaaatttttggatgtaccat 35817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 2141324 - 2141269
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  2141324 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaa 2141269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 27116547 - 27116465
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  |||||||||||||||| |||||    
T  27116547 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 12362679 - 12362764
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||  ||||||||||||||||||  ||||  |||||| |||||||| ||  ||||| |||||||||||||||||||    
T  12362679 cttcaaaaaataagacatttaactattaatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 12362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 21051625 - 21051710
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| |||||| ||||   ||| | ||||||||||||||||||    
T  21051625 cttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcc 21051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 41802191 - 41802106
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||| ||||| |||||| |||||||||  |  |||||||||||| || ||||||||    
T  41802191 cttcaaaaaataacatatttaactattaatttaatgatttggtgtaccaatacactcgaacctttgggtgtaccgtaaaatttgcc 41802106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 2414007 - 2413954
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  2414007 aaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaa 2413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 9534950 - 9534897
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  9534950 aaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaa 9534897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 24097953 - 24097873
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttg 118  Q
    |||||||||||||||| ||||||||||||||  |||| |||||| | ||||||||| |  |||||| ||||||||||||||    
T  24097953 caaaaaataactcattgaactattaatttaataatttggtgtaccattacactcaaatgattgggtttaccatagaatttg 24097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 29959965 - 29959879
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||| | |||||||||||| ||||||||||||| |  ||||||| |||||||||   || || ||||||||||||||||||||    
T  29959965 cttcaaaatacaactcatttaaccattaatttaaagagtgagtgtactgatacactcaaatatattaggtgtaccatagaatttgcc 29959879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 13795591 - 13795673
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||| ||||||||||||||||||  ||||  |||||| ||| |||||||  |||| | |||||||||||||||    
T  13795591 cttcaaaaaataacacatttaactattaatttattgattaggtgtaccaatgcactcaaattttttgatgtaccatagaattt 13795673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 33678240 - 33678155
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  ||||||||||||||||||||||    
T  33678240 ttcaaaaaataactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 33678155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 479995 - 480053
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||  ||||||||||    
T  479995 cttcaaaaaacaactcatttaactattaatttaaagagtgagtgtaccgatacactcaa 480053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 35682181 - 35682119
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttg 100  Q
    |||||||| ||||||||||||| |||||||||| ||| | |||||| ||||||||||| ||||    
T  35682181 ttcaaaaagtaactcatttaacaattaatttaaggatatggtgtaccaatacactcaaatttg 35682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 36339169 - 36339253
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||| |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  36339169 tcaaaaaacaactcatttaaccattaatttaaagaatgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 2318747 - 2318831
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgc 119  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  |||||| | ||||||| |||||||    
T  2318747 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttggatataccataaaatttgc 2318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 8258477 - 8258395
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    ||||||||||||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  |||||||||||||||||||    
T  8258477 ttcaaaaaataactcatttaactatgaatttaaagagtgcgtgtaccggtacactcaaatatagtgggtgtaccatagaattt 8258395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 13118887 - 13118851
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13118887 cttcaaaaaataacttatttaactattaatttaaaga 13118851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 25929642 - 25929560
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| ||||||||||||||||||||| |  || |||   ||||||||   || |||||||||||||||||||||||    
T  25929642 aaaaaataacttatttaactattaatttaaagagtgggtatacccgtacactcaaatatattgggtgtaccatagaatttgcc 25929560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 27979099 - 27979014
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgc 119  Q
    |||||||||| |||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||| |||| ||||||||||||    
T  27979099 cttcaaaaaacaactcatttaaccattaatttaaagagtaagtgtaccgatacactcaaatatattggatgtatcatagaatttgc 27979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 29743981 - 29743895
Alignment:
Q  37 cttcaaaaaataactcatttaactattaa-tttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||| |||| ||||| ||||| |||||| |||||||| ||  |||||  ||||||||| ||||||||    
T  29743981 cttcaaaaaataacacatttaactcttaattttaaggatttggtgtaccaatacacttaaatttttgaatgtaccatataatttgcc 29743895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 37431670 - 37431731
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa---gattttgtgtactaatacactcaa 95  Q
    |||||||||||||| |||||||||||||||||| |   ||||| |||||| |||||||||||    
T  37431670 cttcaaaaaataacacatttaactattaatttataattgatttggtgtaccaatacactcaa 37431731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 38293704 - 38293623
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||| |||||||||||||||||||||||||| |  ||||| | | |||||||   || |||| ||||||||||||||||||    
T  38293704 aaaaacaactcatttaactattaatttaaagagtgagtgtattgacacactcaaatatattggatgtaccatagaatttgcc 38293623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 3024483 - 3024541
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||| ||||||||||||||| |||||||||| |   ||||||| |||||||||    
T  3024483 cttcaaaaaacaactcatttaactataaatttaaagagtgaatgtactagtacactcaa 3024541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 8780165 - 8780127
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattt 76  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  8780165 ttcaaaaaataattcatttaattattaatttaaagattt 8780127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16432976 - 16433057
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||||||||| |||||| |||| ||||| |||||||  ||||||||| |  |||| ||||||||| ||||||||    
T  16432976 aaaaaacaactcatttaattattaaattaaggatttggtgtactggtacactcaaataattggatgtaccataaaatttgcc 16433057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 32625649 - 32625607
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||    
T  32625649 aaaaaataacttatttaattattaatttaaagatttggtgtac 32625607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 33210456 - 33210372
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||||| | |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||    
T  33210456 cttcaaaagacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttg 33210372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 36752539 - 36752589
Alignment:
Q  45 aataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||| |||||||||||||||||||| |||||||| ||| | |||||||||    
T  36752539 aataattcatttaactattaatttaaggattttgtataccactacactcaa 36752589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 42486926 - 42486960
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa 71  Q
    ||||||||||||||| |||||||||||||||||||    
T  42486926 cttcaaaaaataacttatttaactattaatttaaa 42486960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 42597801 - 42597882
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttg--ggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||| |||||||||| |  ||||||   ||||||||| | ||  | ||||||||||||||||||    
T  42597801 aaaaaataactcatttaactatgaatttaaagaatgagtgtaccggtacactcaaatatgatgatgtaccatagaatttgcc 42597882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 38355038 - 38355095
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||||||||||||| |||||||   ||| |||||| | |||||||||    
T  38355038 ttcaaaaaataactcatttaactataaatttaagagtttggtgtaccagtacactcaa 38355095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 40803404 - 40803371
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaa 71  Q
    ||||||||||||||||||||||||| ||||||||    
T  40803404 ttcaaaaaataactcatttaactatgaatttaaa 40803371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 3425877 - 3425841
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  3425877 cttcaaaaaacaactcttttaactattaatttaaaga 3425841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 29996593 - 29996510
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||||| ||||||||||| |||| |||||| |||||  ||||   ||||||||  | |||||| ||||||||||||||||||    
T  29996593 tcaaaaaacaactcatttaattattgatttaacgatttgatgtaacgatacactcatatttttggatgtaccatagaatttgcc 29996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 32467125 - 32467073
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacact 92  Q
    |||||||||| ||||| |||||||||||||| |||||  ||||| ||||||||    
T  32467125 caaaaaataattcattgaactattaatttaatgatttgatgtaccaatacact 32467073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 29347584 - 29347663
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  29347584 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29347663  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 11140329 - 11140247
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  11140329 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 11140247  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 42067661 - 42067579
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  42067661 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 42067579  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 44670582 - 44670664
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  | ||||||||||| |||||||||||    
T  44670582 caaaaaataactcatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgcc 44670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 29786921 - 29787003
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  29786921 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29787003  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 38785406 - 38785488
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||| ||||||||    
T  38785406 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 42364251 - 42364333
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  42364251 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 876543 - 876628
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | |||||||||||||| ||||||||    
T  876543 cttcaaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 876628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 27082670 - 27082752
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  27082670 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27082752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 35171517 - 35171599
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  35171517 caaaaaataactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 35171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 45636171 - 45636089
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||| |||  |||||| |||||||||||  | ||||||||||| |||||||||||    
T  45636171 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 31308958 - 31308877
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||| ||||| |||| | |||||||||||  | || ||||||||||||||||||||    
T  31308958 aaaaaataactcatttaactattaatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcc 31308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 26885292 - 26885378
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||  |||||||||   || |||||||||||||| ||||||||    
T  26885292 cttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 26885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 39630214 - 39630297
Alignment:
Q  40 caaaaaataactcatttaacta-ttaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||  | |||| ||||||||||||||||||    
T  39630214 caaaaaataactcatttaactatttaatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgcc 39630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 40650149 - 40650094
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  40650149 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaa 40650094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 44365703 - 44365621
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||  | ||||||||| |||||||||||||    
T  44365703 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgcc 44365621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 4663459 - 4663544
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| ||||||||||||| |||||    
T  4663459 cttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatagaacttgcc 4663544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 27647563 - 27647478
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||||    
T  27647563 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 27647478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 42848530 - 42848614
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattt--tgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||||  |||| || |||||||||||  | ||||||||||||||||| |||||    
T  42848530 caaaaaataactcatttaactattaatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcc 42848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 7671888 - 7671806
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||| |||||||||||||||||    |||  |||||| |||||||||||  ||||||||||||||||||||||    
T  7671888 cttcaaaaaataacacatttaactattaatttgtttattgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 9506988 - 9506903
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||  || ||||||   || ||||||||| |||||||||||||    
T  9506988 ttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9506903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 9514963 - 9514878
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||  || ||||||   || ||||||||| |||||||||||||    
T  9514963 ttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9514878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 27079711 - 27079785
Alignment:
Q  48 aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||| ||||||||||||| |||||    
T  27079711 aactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27079785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 28718248 - 28718334
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    |||||||||| |||| |||||| ||||||||||||| ||| ||| ||   |||||||||  ||||||||||||||||||||||||||    
T  28718248 cttcaaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgccc 28718334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 47948720 - 47948802
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||| |||| ||  | ||||||||| ||||||| ||||||    
T  47948720 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgccc 47948802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 19547574 - 19547489
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  ||||||  ||||||||||  |||||| ||||||||||||||||||    
T  19547574 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 21289134 - 21289219
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  ||||||  ||||||||||  ||||| |||||||||||||||||||    
T  21289134 cttcaaaaaataacacatttaactattaatttgttgattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgcc 21289219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 25592327 - 25592412
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||| |||||||||||||  ||||| |||||  |||||||||||  |||||| ||||||||| ||||||||    
T  25592327 cttcaaaaaataacacattaaactattaatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 40477843 - 40477759
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||    
T  40477843 cttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 26457280 - 26457362
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||| ||||||||||||||||||||| | ||||||||| ||||||||   || |||| |||||| |||||||||||    
T  26457280 aaaaaacaacttatttaactattaatttaaagagtgtgtgtactagtacactcaaatatattggatgtaccgtagaatttgcc 26457362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 29491745 - 29491663
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  29491745 aaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29491663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 36098957 - 36098921
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||||||||||||||    
T  36098957 cttcaaaaaataactcatttaactattaatttaaaga 36098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 42622691 - 42622609
Alignment:
Q  42 aaaaataactcatttaact-attaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    ||||| ||||||||||| | |||||||||| ||||| |||||||  |||||||||||||   |||||||||||||||||||||    
T  42622691 aaaaacaactcatttaatttattaatttaacgatttggtgtactggtacactcaatttttttgggtgtaccatagaatttgcc 42622609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 44522105 - 44522023
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||| |   ||||| ||||||||||| |   |||  ||||||||||||||||||    
T  44522105 aaaaaataactcatttaactattaatttaaagagtgaatgtaccaatacactcaaatatattgaatgtaccatagaatttgcc 44522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 25482564 - 25482622
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||  ||||||||||    
T  25482564 cttcaaaaaacaactcatttaactattaatttaaagaataggtgtaccgatacactcaa 25482622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 34593774 - 34593720
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||| | |||||||||||||||||||||||| |||||  |||||||||||    
T  34593774 aaaaaataattaatttaactattaatttaaagatttggtgtaacaatacactcaa 34593720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 40473920 - 40473862
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| |||||| ||||||||||||||||||||| | ||||||||  |||||||||    
T  40473920 cttcaaaagataacttatttaactattaatttaaagagtatgtgtactggtacactcaa 40473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 42622172 - 42622256
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||| ||||||||    
T  42622172 tcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 42622256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 43715069 - 43715154
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||  | ||||||||||| ||||  ||||| |||||| ||||||| |||  |||||| ||||||||||||||||||    
T  43715069 cttcaaaaaataatacgtttaactattagtttattgatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 53516902 - 53516987
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||  |||||||||||||||||   ||||  |||||| |||||||||||  ||||  |||||||||||||||||||    
T  53516902 cttcaaaaaataatacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgcc 53516987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 32717738 - 32717662
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccata 111  Q
    ||||| |||||||  ||||||||||||||||||  ||||| ||||| ||||||||||||  |||| |||||||||||    
T  32717738 cttcagaaaataatacatttaactattaatttattgatttagtgtattaatacactcaaattttttggtgtaccata 32717662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 10279320 - 10279356
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10279320 cttcaaaaaacaactcatttaactattaatttaaaga 10279356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 23456540 - 23456504
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23456540 cttcaaaaaaaaactcatttaactattaatttaaaga 23456504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 26850010 - 26849924
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||| |||||||| | |  ||||||  |||||||||   ||  ||||||||||||||||||||||    
T  26850010 cttcaaaaaacaactcatttaactatgaatttaaaaagtgagtgtaccgatacactcaaatataatgggtgtaccatagaatttgcc 26849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 31479638 - 31479559
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||| ||||||||||| |||||||||||  |||| ||||||  ||||||||||  |||| ||||||||||| |||||    
T  31479638 caaaaaaaaactcatttaattattaatttaacaatttggtgtaccgatacactcaaatttttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 45538965 - 45539001
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45538965 cttcaaaaaataacttatttaactattaatttaaaga 45539001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 51350953 - 51350989
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||||||||||||||    
T  51350953 cttcaaaaaacaactcatttaactattaatttaaaga 51350989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 3136351 - 3136273
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||| ||||||||||||||||||  ||||| |||||| ||||||| |||  |||| | ||||| |||||||||    
T  3136351 aaaaaataacacatttaactattaatttattgatttggtgtaccaatacacccaaatttttagatgtacaatagaattt 3136273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 7352489 - 7352574
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatttt---gggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||| ||||||| || |  ||||||  |||||||||| | |   || ||||||||||||||||||    
T  7352489 ttcaaaaaataactcatttaactataaatttaatgagtgagtgtaccgatacactcaaatatagtggatgtaccatagaatttgcc 7352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 16136943 - 16137032
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcccta 123  Q
    |||||||||| || | ||||||||||||||||||||| |   |||||  |||||||||   || |||| |||||||||||||||||||||    
T  16136943 cttcaaaaaacaatttatttaactattaatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcccta 16137032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 40021160 - 40021079
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||| |||||||||||||||||||||||||| |   ||||| | ||||||||   || |||| ||||||||||||||||||    
T  40021160 aaaaacaactcatttaactattaatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcc 40021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 15996906 - 15996872
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa 71  Q
    |||||||||| ||||||||||||||||||||||||    
T  15996906 cttcaaaaaacaactcatttaactattaatttaaa 15996872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 33006385 - 33006351
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa 71  Q
    |||||||||| ||||||||||||||||||||||||    
T  33006385 cttcaaaaaacaactcatttaactattaatttaaa 33006351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 46671421 - 46671387
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||| ||||||||||||||||||||||||||    
T  46671421 tcaaaaaacaactcatttaactattaatttaaaga 46671387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 50247310 - 50247226
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    ||||| |||| |||||||||||||||||||||||||| |  ||||||   ||||||||   || ||||||||||||| |||||||    
T  50247310 cttcacaaaacaactcatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatggaatttg 50247226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 50257881 - 50257827
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||||||||||||| |||||||||| |  ||||||  ||||||||||    
T  50257881 aaaaaataactcatttaactataaatttaaagagtgagtgtaccgatacactcaa 50257827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 51344460 - 51344414
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    |||||||||| |||| ||||||||||||||||||||| | |||||||    
T  51344460 cttcaaaaaacaacttatttaactattaatttaaagaatgtgtgtac 51344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 52162478 - 52162436
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||    
T  52162478 aaaaaataactcatttaactataaatttaaaggtttggtgtac 52162436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 1129449 - 1129532
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaattt 117  Q
    |||||||||| |||| ||||||||||||||||||||| |  ||||||   |||||||||   | ||| ||||||||||||||||    
T  1129449 cttcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatgtattgagtgtaccatagaattt 1129532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 29389018 - 29389105
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 121  Q
    |||||||||| ||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  ||| |||||||||||||||||||    
T  29389018 cttcaaaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaatttgccc 29389105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 47470497 - 47470456
Alignment:
Q  53 atttaactattaatttaaagattttgtgtactaatacactca 94  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  47470497 atttgactattaatttaaggatttggtgtactaatacactca 47470456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 50030072 - 50030105
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||||||||||||||||||| |||||||    
T  50030072 cttcaaaaaataactcatttaactataaatttaa 50030105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 54262854 - 54262887
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    |||||||||||||||||||||||||| |||||||    
T  54262854 cttcaaaaaataactcatttaactataaatttaa 54262887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 4817331 - 4817367
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||  ||||||||||||||||||||||||||    
T  4817331 cttcaaaaatcaactcatttaactattaatttaaaga 4817367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 8966001 - 8965915
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||| |||||||| |||||||||||| ||||||| ||| | |||||| | ||||||||   || |||| |||||| |||||||||||    
T  8966001 cttctaaaaataattcatttaactataaatttaaggatctggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcc 8965915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 41282855 - 41282891
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||| |||||||||||||||||||||    
T  41282855 cttcaaaaaacaacttatttaactattaatttaaaga 41282891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 46507677 - 46507709
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||| ||||||||||    
T  46507677 aaaaaataactcatttaactatgaatttaaaga 46507709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 47745913 - 47745877
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  47745913 cttcaaaaaacaactcttttaactattaatttaaaga 47745877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 51996743 - 51996822
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||| |||| |||||| ||||||||||| | |||  ||||||  |||||||||  | |||||||||||||||||||||    
T  51996743 aaaaaacaactaatttaattattaatttaatgctttgatgtactggtacactcaaaatgttgggtgtaccatagaatttg 51996822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 54428581 - 54428545
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  54428581 cttcaaaaaacaactcatttaactatgaatttaaaga 54428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 54788442 - 54788406
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||| | ||||||||||||||||||||||||||    
T  54788442 cttcaaaatacaactcatttaactattaatttaaaga 54788406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 37511170 - 37511088
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||| |||||||||    
T  37511170 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgcc 37511088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 946058 - 945976
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||| |||||| |||||||||||    
T  946058 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgcc 945976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 14498627 - 14498709
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  14498627 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 14498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 28090274 - 28090192
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||  | |||||||||||||||||||||||    
T  28090274 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 29773527 - 29773445
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  29773527 caaaaaataaatcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29773445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 36002438 - 36002356
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  | |||| |||||||||||| |||||    
T  36002438 caaaaaataactcatttaactattaatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgcc 36002356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 2273091 - 2273009
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgccc 121  Q
    |||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || |||||||||||||||||||||||||    
T  2273091 aaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccc 2273009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 19718672 - 19718757
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||  |||||| ||||||||||||||||||    
T  19718672 cttcaaaatataacacatttaattattaatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgcc 19718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 17642159 - 17642074
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || ||||| ||||||||||||||||||    
T  17642159 cttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgcc 17642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 10280642 - 10280587
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  10280642 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaa 10280587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 15726214 - 15726296
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  15726214 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 15726296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 23286647 - 23286565
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||  | || ||||||||||||||||||||    
T  23286647 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcc 23286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 29229501 - 29229583
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||  |||| |||||| ||||||||||| |  |||||||||||||||||||||||    
T  29229501 caaaaaataactcacttaactattaatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 29229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 38502266 - 38502184
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  38502266 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 38502184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 37465769 - 37465681
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcccta 123  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||| |||||||| ||  |||||| |||||||||||||||||||||    
T  37465769 cttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcccta 37465681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 44934981 - 44934901
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||| ||||  | |||||||||||||||||||||    
T  44934981 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaatttg 44934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 34332194 - 34332112
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| ||| |||| ||  | |||||||||||||||||||||||    
T  34332194 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgcc 34332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 1043144 - 1043060
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||    
T  1043144 cttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 16323644 - 16323559
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||| |||||| ||||||||||||||||||  ||||| |||||| |||||||||||   |||||||||| |||||||||||||    
T  16323644 cttcaaataataacacatttaactattaatttattgatttggtgtaccaatacactcaaatctttgggtgtatcatagaatttgcc 16323559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 42444539 - 42444624
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| | ||||||||||||||||||| ||||| |||||| |||||||||||   ||| | ||||||||||||||||||    
T  42444539 cttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgcc 42444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 43049621 - 43049537
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||| |||||||||| ||||| |||||| |||||| ||||  |||||| ||||||||||||||||||    
T  43049621 cttcaaaaaataacacatttaac-attaatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 43485362 - 43485447
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  |||||  ||||| |||||||||  ||||||| |||||||||| ||||||||    
T  43485362 cttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccataaaatttgcc 43485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 529352 - 529267
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  || || |||||| ||||||| |||  ||||  |||||||||||||||||||    
T  529352 cttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaattttttagtgtaccatagaatttgcc 529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 23274703 - 23274649
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||| ||||||||||||||||||||||| ||| || |||||||||||    
T  23274703 aaaaaataactcctttaactattaatttaaagatttggtgcaccaatacactcaa 23274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 37161585 - 37161504
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||| |||||  |||||  ||||||||||  | ||||||||| ||||||| |||||    
T  37161585 aaaaaataactcatttaactattaatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcc 37161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 26439844 - 26439930
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| ||| |||||||   ||||| |||||||||||||||||||    
T  26439844 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatgcactcaaattttttgagtgtaccatagaatttgcc 26439930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 29454534 - 29454616
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||| ||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  29454534 aaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29454616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 40776941 - 40777022
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    |||||||| |||| ||||||||||||||||||| | |   ||||| ||||||||||   |||||||||||||||||||||||    
T  40776941 tcaaaaaacaacttatttaactattaatttaaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaattt 40777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 4475129 - 4475045
Alignment:
Q  38 ttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccc 121  Q
    ||||||||||||   ||||||||||||||||   ||||| |||||| |||||||||||  ||||||||| ||||||||||||||||    
T  4475129 ttcaaaaaataatagatttaactattaatttgttgatttggtgtaccaatacactcaaatttttgggtg-accatagaatttgccc 4475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6800097 - 6800178
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| ||| |||||||||||||||| || ||||| |||||| |||||||||||   |||| |||||||||| ||||||||    
T  6800097 aaaaaaaaacacatttaactattaattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgcc 6800178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 34633945 - 34633865
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||| |||||||||||||||||||||||||| |  ||||||  |||||||||   || ||||||||| |||||||||||    
T  34633945 aaaaaacaactcatttaactattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtatcatagaatttg 34633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 39347455 - 39347536
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||||||  |||||  ||||| |||||||||||  |||| | ||||||||| ||||||||    
T  39347455 aaaaaataacacatttaactattaatttattgatttaatgtaccaatacactcaaattttttgatgtaccataaaatttgcc 39347536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 12163267 - 12163347
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||||||||||  ||||  ||||| ||| || |||| |  ||||||| |||||||||||||    
T  12163267 caaaaaataactcatttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaatttg 12163347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 12407695 - 12407775
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||||||||||  ||||  ||||| ||| || |||| |  ||||||| |||||||||||||    
T  12407695 caaaaaataactcatttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaatttg 12407775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 29265920 - 29265999
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    |||||||||| |||||||||||||||||||||| |  || |||| |||||||||   || |||||||||||||| |||||    
T  29265920 aaaaaataacacatttaactattaatttaaagagtgggtatactgatacactcaaatatattgggtgtaccatataattt 29265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 29459715 - 29459631
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccct 122  Q
    |||||||||||||||||||||||||||||||  ||||  |  |  |||||||||||  | |||||||||||||| ||||||||||    
T  29459715 caaaaaataactcatttaactattaatttaagaatttgatagatcaatacactcaaattgttgggtgtaccataaaatttgccct 29459631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 4214816 - 4214902
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||| | ||||||||||||||||||||| |  || |||   ||||||||   || |||||||||||||||||||||||    
T  4214816 cttcaaaaaataatttatttaactattaatttaaagagtgggtataccggtacactcaaatatattgggtgtaccatagaatttgcc 4214902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6631226 - 6631312
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| ||||||||||||||||||||| |  || |||   ||||||||   || |||||||||||||||||||||||    
T  6631226 cttcaaaaaacaactaatttaactattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcc 6631312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 11110440 - 11110404
Alignment:
Q  48 aactcatttaactattaatttaaagattttgtgtact 84  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11110440 aactcatttaactattaatttaaagatttagtgtact 11110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 36667319 - 36667283
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||| ||||||||||    
T  36667319 cttcaaaaaataactcatttaactatgaatttaaaga 36667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 37676258 - 37676344
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||| |||||||||| |  ||||||   ||||||||   ||  ||||||||||||||||||||||    
T  37676258 cttcaaaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 37676344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 5215646 - 5215727
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactc--aattttgggtgtaccatagaatttgcc 120  Q
    |||||| |||| |||||| ||||||||||| | ||||||||||  ||||||||  ||| ||| |||||||||| ||||||||    
T  5215646 aaaaaacaactaatttaattattaatttaatgtttttgtgtaccgatacactcaaaatattgagtgtaccataaaatttgcc 5215727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 15451769 - 15451803
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaa 71  Q
    ||||||| |||||||||||||||||||||||||||    
T  15451769 cttcaaagaataactcatttaactattaatttaaa 15451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 17792289 - 17792231
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||| |||||||||||||||| ||||||| | ||| |||||| | |||||||||    
T  17792289 cttcaaaaagtaactcatttaactataaatttaagggtttggtgtaccagtacactcaa 17792231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 26988708 - 26988792
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||||||  |||| ||||||||||||||||||||| |  ||||||  |||||||||   || |||||||||||||| ||||||    
T  26988708 cttcaaaaagcaacttatttaactattaatttaaagaatgagtgtaccgatacactcaaatatattgggtgtaccatataatttg 26988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 39300411 - 39300445
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||| ||||||||||||||||||||||||||    
T  39300411 tcaaaaaacaactcatttaactattaatttaaaga 39300445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 13483222 - 13483302
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||| |||||| |||||||||||  |||||  ||| | ||||||| |||  ||||| |||||||||||||||||||    
T  13483222 aaaaataacacatttatctattaatttattgatttgatgtcccaatacacccaaaattttgagtgtaccatagaatttgcc 13483302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 34166233 - 34166287
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| ||||||||||| ||||||||||||||   ||||||| |||||||||||    
T  34166233 tcaaaaaacaactcatttaattattaatttaaaga--gtgtgtaccaatacactcaa 34166287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 40578776 - 40578743
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||||||||||| ||||||||||    
T  40578776 caaaaaataactcatttaactatgaatttaaaga 40578743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 41720329 - 41720250
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaattt 117  Q
    |||||| ||||||||||||||| |||||||||| |  ||||||  |||||||||   ||  |||||||||||||||||||    
T  41720329 aaaaaacaactcatttaactatgaatttaaagagtgggtgtaccgatacactcaaatatagtgggtgtaccatagaattt 41720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 2261115 - 2261029
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| |||||| |||||||||||||| |  ||||||   ||||||||   || ||| |||||||||||||||||||    
T  2261115 cttcaaaaaacaacttatttaattattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 26522287 - 26522323
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  26522287 cttcaaaaaacaactcatttaactatgaatttaaaga 26522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 27847595 - 27847559
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  27847595 cttcaaaaaacaactcatttaactatgaatttaaaga 27847559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 36162272 - 36162190
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| ||| |||||||||||||||||||||| |   ||||||  ||||||||   || |||||||||| ||||||||||||    
T  36162272 aaaaaacaacacatttaactattaatttaaagagtggatgtactggtacactcaaatatattgggtgtactatagaatttgcc 36162190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 45452707 - 45452743
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  45452707 cttcaaaaaataacttatttaactactaatttaaaga 45452743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 6884241 - 6884155
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccctaa 124  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||| |||||    
T  6884241 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgtcctaa 6884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 12547449 - 12547364
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||  |||||||||| || ||||||||||||||||||||||||    
T  12547449 cttcaaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgcc 12547364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 34665653 - 34665573
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||| ||||||||||||||    
T  34665653 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaatttg 34665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6438496 - 6438580
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaat-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||  || |||| |||||||||||||||||||    
T  6438496 cttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactatatctttgagtgtaccatagaatttgcc 6438580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 11813521 - 11813600
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||||    
T  11813521 caaaaaataacacatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 59002 - 58920
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||  | |||||||||||||||| ||||||    
T  59002 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagattttgcc 58920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 4673926 - 4674008
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||||||||||||||||||  |||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  4673926 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 4674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 5092079 - 5091997
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | || | ||||||||||||||||||    
T  5092079 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgcc 5091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 11227709 - 11227627
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||||||||||    
T  11227709 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 14533146 - 14533228
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||| | ||  | |||||||||||||||||||||||    
T  14533146 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcc 14533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6513585 - 6513670
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| |||||||||||   ||| ||||||||||||||||||||    
T  6513585 cttcaaaaaataacacatttaactattaatttattgatttagtgtaccaatacactcaaatctttaggtgtaccatagaatttgcc 6513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 5389525 - 5389605
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattt--tgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||||||||||  |||| |||||| ||||||||||| ||  ||| ||||||||||||||||    
T  5389525 caaaaaataactcatttaactattaatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 3383511 - 3383593
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| ||||||||| ||||||||    
T  3383511 caaaaaatcactcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgcc 3383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 42427895 - 42427977
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  42427895 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 42427977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 37909464 - 37909379
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  ||||||||||||||||||  ||||| |||||| ||||||||||||    
T  37909464 cttcaaaaaataacacatttaactattaatttgttgattgggtgtactaatacactcaaatttttgagtgtactatagaatttgcc 37909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 11598200 - 11598114
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||   ||||| |||||||||||||||||||    
T  11598200 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 11598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 36489443 - 36489360
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||  ||||||||||||||||||  ||||| |||||| |||||||||||   ||||||||||| ||||||||||    
T  36489443 cttcaaaaaataatacatttaactattaatttattgatttagtgtaccaatacactcaaatctttgggtgtacaatagaatttg 36489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 1353586 - 1353507
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-att-ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||  |||||| ||||| |||||| |||||||||| ||| |||||||||||||||||||||||    
T  1353586 aaaaaataacccatttaactat--atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgcc 1353507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 5420312 - 5420254
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||||| | ||||||||||||||||||| ||||| |||||| |||||||||||    
T  5420312 cttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaa 5420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 30980966 - 30980882
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttg 118  Q
    |||||||||| |||||||||||||||||||||||||| |   ||||| |||||||| |   || |||||||||||||||||||||    
T  30980966 cttcaaaaaacaactcatttaactattaatttaaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaatttg 30980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 1580566 - 1580649
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 121  Q
    |||||||||||||||||||| |||||||||||| |  ||||||   ||||||||   || ||||||||||||||||||||||||    
T  1580566 aaaaaataactcatttaactgttaatttaaagagtaagtgtaccggtacactcaaatatattgggtgtaccatagaatttgccc 1580649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 35310153 - 35310190
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagat 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35310153 cttcaaaaaataactcatttaactattaatttaaagat 35310190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 37083290 - 37083238
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacact 92  Q
    |||||||||||||||||||||||||||||||| |||  |||||| ||||||||    
T  37083290 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacact 37083238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 45157616 - 45157530
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||| ||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  45157616 cttcaaaaaacaactcatttaaccattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 15771634 - 15771716
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||||||| ||| |||||||||||||| ||||  |||||| |||||||| || |  |||||||||| ||||||||||||    
T  15771634 caaaaaataacttattgaactattaatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgcc 15771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 20212475 - 20212559
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||||||||||||||||   || || |||||| |||||||| ||  ||||| |||||||||||||||||||    
T  20212475 cttcaaaaaataacacatttaactattaatttgttga-ttggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 20212559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 34438511 - 34438592
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||||||  ||||| |||| | |||||||||||  | |||| ||||||||| ||||||||    
T  34438511 aaaaaataacacatttaactattaatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgcc 34438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 38963389 - 38963470
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| ||||||||||||||||||| |||||  ||||| |||||| ||||  | |||| ||||||||| ||||||||    
T  38963389 aaaaaataacccatttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgcc 38963470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 42641176 - 42641257
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||| |||| |||||| ||||||||||||| ||| ||| ||   |||||||||  |||||||||||||||||||||||||    
T  42641176 aaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgcc 42641257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 6945426 - 6945339
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 121  Q
    |||||||||| |||||||||||||||||||||||| | |  ||||||   ||||||||   || |||| |||||||||||||||||||    
T  6945426 cttcaaaaaacaactcatttaactattaatttaaaaaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgccc 6945339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 8371890 - 8371970
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||| | ||||||||||||||||||| |||| |||||  |||||||| ||  | |||| ||||||||||||||||    
T  8371890 caaaaaataatttatttaactattaatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaatttg 8371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 37425535 - 37425568
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaa 70  Q
    ||||||||||||||||||||||||||||||||||    
T  37425535 cttcaaaaaataactcatttaactattaatttaa 37425568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 39620273 - 39620190
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccc 121  Q
    |||||| |||| ||||||||||||||||||||| |  ||||||  |||||||||   || |||||||||||||| |||||||||    
T  39620273 aaaaaacaacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgccc 39620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 40370550 - 40370489
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattt 98  Q
    |||||||||||||| ||||||||||||||||||  ||||| || ||| ||||||||| ||||    
T  40370550 cttcaaaaaataacacatttaactattaatttattgatttggtttaccaatacactctattt 40370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 40947084 - 40947175
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccctaac 125  Q
    |||||||||| |||| ||||||||||||||||||||| |  ||||||   ||||||||   || ||||||| ||||||||||||||| ||||    
T  40947084 cttcaaaaaacaacttatttaactattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgcaccatagaatttgccttaac 40947175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 9122477 - 9122513
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9122477 cttcaaaaaataactcatttaactataaatttaaaga 9122513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 33423338 - 33423420
Alignment:
Q  40 caaaaaataactcatttaactat--taatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||| |||||| ||||  | || | ||||||||||||||||    
T  33423338 caaaaaataactcatttaactattataatttaaggatttggtgtaccaatacattcaaattgttagatgtaccatagaatttg 33423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 11088297 - 11088216
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||| ||||| ||||| |||||||||||  |||| ||||||   ||||||||| |  |||||||||||||||||||||||    
T  11088297 aaaaaacaactcttttaattattaatttaacaatttggtgtaccggtacactcaaatatttgggtgtaccatagaatttgcc 11088216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 14960031 - 14960085
Alignment:
Q  206 ttgtagggtatgcttcttgctggaacagactcatcagctgtaacattagagtggg 260  Q
    |||||||||||||||||||| ||||||||| ||||||| || ||| |||| ||||    
T  14960031 ttgtagggtatgcttcttgcgggaacagacacatcagcagtgacaatagaatggg 14960085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 19636419 - 19636477
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||  |||||||||||||||||  ||| | |||||| |||||||||||    
T  19636419 cttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaa 19636477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 19835012 - 19835070
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    ||||||||||||||  |||||||||||||||||  ||| | |||||| |||||||||||    
T  19835012 cttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaa 19835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 34091779 - 34091745
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||| ||||||||||||||||||||||||||    
T  34091779 tcaaaaaacaactcatttaactattaatttaaaga 34091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 37782170 - 37782259
Alignment:
Q  38 ttcaaaaaat-aactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgccctaa 124  Q
    |||||||||| ||||||||||| ||||||||||| | ||| ||||||    ||||||||  |||||| |||| |||||||||||||||||    
T  37782170 ttcaaaaaatcaactcatttaattattaatttaacgttttggtgtaccggcacactcaaatttttggatgtaacatagaatttgccctaa 37782259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 38073427 - 38073512
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| |||| | ||||||||||||| ||| ||| ||   |||||||||  |||||| ||||||||||||||||||    
T  38073427 cttcaaaaaacaactaatttgattattaatttaaaggtttggtgcaccggtacactcaaaattttggatgtaccatagaatttgcc 38073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 3261043 - 3261014
Alignment:
Q  42 aaaaataactcatttaactattaatttaaa 71  Q
    ||||||||||||||||||||||||||||||    
T  3261043 aaaaataactcatttaactattaatttaaa 3261014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 4298222 - 4298258
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  4298222 cttcaaaaaacaactcatgtaactattaatttaaaga 4298258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 9589199 - 9589163
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  9589199 cttcaaaaaacaactcatttaactatgaatttaaaga 9589163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 17821617 - 17821531
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||| |||||||| |||||||||||| ||||||||| | | |||||| || |||||||   || |||| |||||| |||||||||||    
T  17821617 cttctaaaaataattcatttaactataaatttaaaggtctggtgtaccaagacactcaaatatgttggatgtaccgtagaatttgcc 17821531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 32499217 - 32499150
Alignment:
Q  55 ttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||  ||||| |||||  |||||||||||  | || ||||||||||||||||||||    
T  32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcc 32499150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 33494012 - 33493930
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| || |||||||||||||||||||| | |||||| |||  |||||||||   || ||| ||||||| |||||||||||    
T  33494012 aaaaaaaaattcatttaactattaatttaagggttttgtctaccgatacactcaaatatgttgtgtgtaccgtagaatttgcc 33493930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 42849648 - 42849684
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  42849648 cttcaaaaaacaactcttttaactattaatttaaaga 42849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 2258985 - 2258905
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||    
T  2258985 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 6848592 - 6848510
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||||  | |||||||||||||||||||||||    
T  6848592 caaaaaataactcatttaactattaatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgcc 6848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 8401740 - 8401822
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  |||| ||||||||| ||||||||    
T  8401740 caaaaaataactcatttaactattaatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcc 8401822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 11446821 - 11446736
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca-at-tttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||| |||||||||| || ||||||||||||||||||||||||    
T  11446821 cttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 11446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 24487612 - 24487683
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccat 110  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||    
T  24487612 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 1096303 - 1096221
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacact--caattttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |   ||| ||||||||||||||||| |||||    
T  1096303 caaaaaataactcatttaactattaatttaaagatttagtgtaccaatacaataaaaatattgggtgtaccatagaacttgcc 1096221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 13390467 - 13390385
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||  | ||||||||||||||||| |||||    
T  13390467 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 13390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 24212994 - 24212912
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt--ttgggtgtaccatagaatttgcc 120  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||| |  |||| ||||||||||||||||||    
T  24212994 caaaaaatcactcatttaactattaatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgcc 24212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 26358877 - 26358959
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||  | ||||||||||||||||| |||||    
T  26358877 caaaaaataactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 26358959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 32834098 - 32834180
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||  | || ||||||||||||||||||||    
T  32834098 caaaaaataactcattgaactattaatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgcc 32834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 17545687 - 17545607
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||| ||||||||||||||||||  |||| |||||| |||||||||||  | |||||||||||||||||||||    
T  17545687 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 8549875 - 8549961
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  8549875 cttcaaaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 9661838 - 9661752
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||   ||||||||   || |||||||||||||||||||||||    
T  9661838 cttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 4110633 - 4110551
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||| | | ||  | ||||||||||||||||| |||||    
T  4110633 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatatatttaaattattgggtgtaccatagaacttgcc 4110551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 30020679 - 30020761
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaattt 117  Q
    |||||||||||||| ||||||||||||||||||  ||||| || ||  |||||||||||  |||||| |||||||||||||||    
T  30020679 cttcaaaaaataacacatttaactattaatttattgatttggtatatcaatacactcaaacttttggatgtaccatagaattt 30020761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 4509516 - 4509430
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||||||   ||||||||   || || ||||||||||||||||||||    
T  4509516 cttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattaggtgtaccatagaatttgcc 4509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 16892989 - 16892903
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa---ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||| |||||| ||||||||||||| ||| ||| ||   |||||||||   |||||||||||||||||||||||||    
T  16892989 cttcaaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaaattttgggtgtaccatagaatttgcc 16892903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 13719197 - 13719112
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgc 119  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||||||   ||||||||   || ||||||||||| ||||||||||    
T  13719197 cttcaaaaaataactcatttaactataaatttaaggatctagtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgc 13719112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 243207 - 243253
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||    
T  243207 cttcaaaaaacaactcatttaactattaatttaaagaatgtgtgtac 243253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6265255 - 6265340
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    |||||||||||||| |||| |||||||||||||  ||||| | |||  |||||||||||  |||| | ||||||||||||||||||    
T  6265255 cttcaaaaaataacacattaaactattaatttattgatttggggtatcaatacactcaaatttttagatgtaccatagaatttgcc 6265340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 15383525 - 15383610
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  ||||||||| |||||||  ||||| || ||| |||||||||||  |||||| ||||||||| ||||||||    
T  15383525 cttcaaaaaataacatatttaactaataatttactgatttggtataccaatacactcaaatttttggatgtaccatataatttgcc 15383610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 4901275 - 4901328
Alignment:
Q  42 aaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||| |||||||||||||||||||| |||||  ||||| |||||||||||    
T  4901275 aaaaataattcatttaactattaatttaaggatttaatgtaccaatacactcaa 4901328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 17010446 - 17010393
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaataca 90  Q
    |||||||||||||| ||||||||||||||||||  || || |||||||||||||    
T  17010446 cttcaaaaaataacacatttaactattaatttattgaattggtgtactaataca 17010393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 9686862 - 9686776
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||||||  ||||||||||||  |||||||||||| |  ||||||| |||||||||   || ||| |||||||||||||||||||    
T  9686862 cttcaaaaagcaactcatttaaccgttaatttaaagagtgagtgtactgatacactcaaatatattgagtgtaccatagaatttgcc 9686776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 529119 - 529153
Alignment:
Q  39 tcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||||||||||||||||||||| ||||||    
T  529119 tcaaaaaataactcatttaactattaatctaaaga 529153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 11763494 - 11763540
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtac 83  Q
    |||||||||| |||| ||||||||||||||||||||| | |||||||    
T  11763494 cttcaaaaaacaacttatttaactattaatttaaagagtgtgtgtac 11763540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 8376345 - 8376429
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaattttg--ggtgtaccatagaatttgc 119  Q
    |||||||||||||| |||||||||| |||||||  || || |||||| |||||| |||| ||||  | ||||||||| |||||||    
T  8376345 cttcaaaaaataacacatttaactaataatttattgacttggtgtaccaatacattcaaatttgtagatgtaccataaaatttgc 8376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 35037636 - 35037559
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt-ttgggtgtaccatagaattt 117  Q
    |||||| |||||||||||||||||||||||  ||||  ||||  | | ||||||||| ||| ||||||||||||||||    
T  35037636 aaaaaacaactcatttaactattaatttaagtatttgttgtatcagtgcactcaattattgagtgtaccatagaattt 35037559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 4576471 - 4576435
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||||||||||| |||||||||||||    
T  4576471 cttcaaaaaacaactcatttaaccattaatttaaaga 4576435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 33574084 - 33574048
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaaga 73  Q
    |||||||||| |||| |||||||||||||||||||||    
T  33574084 cttcaaaaaaaaacttatttaactattaatttaaaga 33574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 36933 - 37015
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||  | ||| |||||||||||||||||||    
T  36933 caaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 37015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 6584 - 6669
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 120  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||| |||||||||||  |||| ||||||||||||||||||||    
T  6584 cttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 3350 - 3438
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgccct 122  Q
    ||||||||||||||| ||||||||||||||||||||| |  |||||||  ||||||||   || |||||||||||||||||||||||||    
T  3350 cttcaaaaaataacttatttaactattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgccct 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 48092 - 48037
Alignment:
Q  40 caaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa 95  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||    
T  48092 caaaaaataaatcatttaactattaatttaaggatttggtgtaccaatacactcaa 48037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 2105 - 2022
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttg 118  Q
    |||||||||||||  |||||||||||||||||   ||||  |||||| |||||||||||  ||||| |||||||||||||||||    
T  2105 cttcaaaaaataagacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 29330 - 29255
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccat 110  Q
    |||||||||||||| |||||||||||||||||   ||||  |||||| |||||||||||  |||||||||||||||    
T  29330 cttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccat 29255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 45843 - 45761
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| |||||| ||||||||||||||||||||||  ||||   |||||||||   ||||||| ||||||||||||||||||    
T  45843 aaaaaacaactcacttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgcc 45761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 214225 - 214141
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgc 119  Q
    |||| ||||||||||| ||| | ||| ||||| | |||||||||||| | |||||||||  ||||| ||||||||||||||||||    
T  214225 cttcgaaaaataactcgtttcaatatgaatttgatgattttgtgtaccagtacactcaaatttttgagtgtaccatagaatttgc 214141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16907 - 16989
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca---attttgggtgtaccatagaatttgcc 120  Q
    |||||| | |||||||||| ||||||||||||| |  ||||||  |||||||||   || |||||||||||||||||||||||    
T  16907 aaaaaacatctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 55937 - 55855
Alignment:
Q  41 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 120  Q
    |||||| | |||||||||| ||||||||||||| |  ||||||  |||||||||| |   |||||||||||||||||||||||    
T  55937 aaaaaacatctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 45193 - 45136
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactca 94  Q
    |||||||||| ||||||||||||||| ||||| ||| ||| |||||||  ||||||||    
T  45193 cttcaaaaaacaactcatttaactataaattttaaggtttggtgtactggtacactca 45136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 159 - 245
Alignment:
Q  37 cttcaaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaatt---ttgggtgtaccatagaatttgcc 120  Q
    |||||||||| |||||||||| |||| || ||||||  || ||||||   ||||||||| |   |||||||||||||||||||||||    
T  159 cttcaaaaaacaactcatttacctataaaattaaagggttggtgtaccggtacactcaaatatgttgggtgtaccatagaatttgcc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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