View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3762_high_2 (Length: 783)

Name: NF3762_high_2
Description: NF3762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3762_high_2
NF3762_high_2
[»] chr4 (53 HSPs)
chr4 (1-577)||(21401675-21402255)
chr4 (577-745)||(54897328-54897495)
chr4 (576-745)||(789528-789696)
chr4 (578-745)||(32202481-32202646)
chr4 (609-739)||(28755646-28755774)
chr4 (578-745)||(7768958-7769124)
chr4 (578-745)||(29591209-29591375)
chr4 (577-744)||(43944528-43944693)
chr4 (585-747)||(50619104-50619264)
chr4 (577-737)||(12356272-12356431)
chr4 (578-745)||(16536068-16536234)
chr4 (608-735)||(37987965-37988091)
chr4 (584-739)||(54655883-54656036)
chr4 (605-739)||(24679670-24679802)
chr4 (577-745)||(4268821-4268988)
chr4 (628-745)||(15186263-15186378)
chr4 (624-741)||(39843931-39844046)
chr4 (578-745)||(18067879-18068045)
chr4 (578-745)||(32217065-32217230)
chr4 (577-739)||(6164120-6164280)
chr4 (578-744)||(33108673-33108837)
chr4 (606-739)||(4089168-4089300)
chr4 (578-734)||(4220226-4220380)
chr4 (605-737)||(19503132-19503263)
chr4 (578-745)||(43202384-43202549)
chr4 (608-739)||(42898774-42898906)
chr4 (587-745)||(47231881-47232038)
chr4 (624-739)||(54945826-54945938)
chr4 (578-735)||(36395129-36395285)
chr4 (584-708)||(30387140-30387265)
chr4 (587-738)||(53655887-53656037)
chr4 (624-738)||(31680510-31680622)
chr4 (606-731)||(46148973-46149097)
chr4 (577-748)||(5091611-5091779)
chr4 (606-745)||(30154191-30154328)
chr4 (636-739)||(54054574-54054675)
chr4 (628-738)||(52533836-52533944)
chr4 (620-739)||(49915185-49915303)
chr4 (647-742)||(42815132-42815225)
chr4 (611-744)||(3783534-3783666)
chr4 (577-699)||(39877246-39877371)
chr4 (635-744)||(55882705-55882811)
chr4 (578-698)||(16820917-16821038)
chr4 (636-739)||(46688264-46688370)
chr4 (605-738)||(50603254-50603387)
chr4 (667-739)||(50167617-50167685)
chr4 (580-739)||(1432550-1432702)
chr4 (642-721)||(53268764-53268840)
chr4 (610-734)||(52697083-52697205)
chr4 (606-701)||(31517227-31517324)
chr4 (578-684)||(53003956-53004063)
chr4 (666-708)||(41265514-41265556)
chr4 (630-688)||(8133782-8133840)
[»] chr7 (48 HSPs)
chr7 (577-745)||(29993486-29993653)
chr7 (576-739)||(24798401-24798563)
chr7 (577-745)||(24438497-24438664)
chr7 (606-746)||(23363195-23363334)
chr7 (584-739)||(1737006-1737159)
chr7 (610-744)||(5239306-5239439)
chr7 (630-745)||(30810675-30810788)
chr7 (578-744)||(34606282-34606447)
chr7 (605-742)||(8754612-8754748)
chr7 (579-737)||(11686324-11686482)
chr7 (608-744)||(47083076-47083211)
chr7 (578-745)||(34333304-34333469)
chr7 (608-738)||(28587936-28588065)
chr7 (584-745)||(18485981-18486141)
chr7 (576-739)||(4628592-4628754)
chr7 (606-745)||(12218464-12218602)
chr7 (606-745)||(43594064-43594202)
chr7 (576-738)||(525074-525234)
chr7 (606-736)||(45045799-45045928)
chr7 (628-746)||(47839511-47839627)
chr7 (579-746)||(5729365-5729531)
chr7 (606-739)||(47657006-47657136)
chr7 (578-739)||(42044294-42044453)
chr7 (606-735)||(13064904-13065033)
chr7 (636-734)||(34546373-34546469)
chr7 (606-738)||(7689228-7689359)
chr7 (642-739)||(27456178-27456273)
chr7 (606-733)||(18117175-18117301)
chr7 (628-743)||(46716660-46716773)
chr7 (606-738)||(33636479-33636610)
chr7 (642-744)||(37631607-37631707)
chr7 (642-708)||(37674169-37674235)
chr7 (630-720)||(22739868-22739957)
chr7 (608-734)||(28262062-28262182)
chr7 (579-742)||(23357711-23357870)
chr7 (666-738)||(4087650-4087720)
chr7 (652-735)||(29835779-29835860)
chr7 (665-739)||(4100612-4100684)
chr7 (630-739)||(18469993-18470099)
chr7 (666-734)||(3021922-3021988)
chr7 (622-701)||(13556474-13556553)
chr7 (666-737)||(36437405-36437474)
chr7 (629-688)||(47118041-47118100)
chr7 (578-734)||(38128322-38128478)
chr7 (666-734)||(18220527-18220593)
chr7 (666-721)||(18220759-18220812)
chr7 (670-736)||(18220624-18220688)
chr7 (577-649)||(6097451-6097524)
[»] chr6 (36 HSPs)
chr6 (583-747)||(2350670-2350833)
chr6 (578-745)||(392116-392282)
chr6 (577-739)||(12145116-12145277)
chr6 (578-744)||(23402159-23402324)
chr6 (578-739)||(26467124-26467284)
chr6 (578-745)||(32929508-32929674)
chr6 (578-745)||(4215715-4215881)
chr6 (577-739)||(3515792-3515953)
chr6 (578-739)||(18276612-18276775)
chr6 (578-737)||(2580980-2581138)
chr6 (585-739)||(13416967-13417122)
chr6 (584-735)||(32985199-32985349)
chr6 (606-733)||(34851877-34852003)
chr6 (578-745)||(27433512-27433678)
chr6 (576-737)||(1391176-1391336)
chr6 (576-738)||(35043917-35044076)
chr6 (610-739)||(7851191-7851319)
chr6 (609-739)||(29451146-29451275)
chr6 (606-741)||(1840275-1840409)
chr6 (584-739)||(3026015-3026169)
chr6 (610-737)||(12525747-12525873)
chr6 (579-741)||(5323424-5323585)
chr6 (636-739)||(20897974-20898075)
chr6 (628-739)||(21878398-21878507)
chr6 (636-739)||(34477609-34477710)
chr6 (578-735)||(25165413-25165569)
chr6 (605-733)||(9661018-9661145)
chr6 (646-734)||(34396596-34396682)
chr6 (606-739)||(11115125-11115255)
chr6 (642-745)||(23629641-23629742)
chr6 (602-723)||(961051-961171)
chr6 (628-734)||(28225252-28225355)
chr6 (607-738)||(29978259-29978389)
chr6 (664-739)||(13529481-13529554)
chr6 (577-724)||(31280362-31280502)
chr6 (533-577)||(2516309-2516353)
[»] chr8 (47 HSPs)
chr8 (579-745)||(30675574-30675738)
chr8 (578-746)||(9063052-9063219)
chr8 (578-746)||(4648213-4648380)
chr8 (610-745)||(33357161-33357295)
chr8 (576-739)||(34228708-34228870)
chr8 (578-744)||(168487-168652)
chr8 (578-744)||(27988500-27988664)
chr8 (578-744)||(28045802-28045966)
chr8 (610-745)||(42035013-42035147)
chr8 (577-739)||(16888543-16888704)
chr8 (578-747)||(29444140-29444308)
chr8 (609-738)||(36730471-36730599)
chr8 (585-739)||(21595872-21596025)
chr8 (585-738)||(2805267-2805419)
chr8 (578-738)||(11112666-11112825)
chr8 (578-744)||(4537744-4537909)
chr8 (568-737)||(9537813-9537982)
chr8 (577-739)||(40831303-40831464)
chr8 (578-745)||(13643032-13643197)
chr8 (578-745)||(13743457-13743622)
chr8 (624-733)||(16890527-16890634)
chr8 (606-738)||(20831581-20831712)
chr8 (578-744)||(32113929-32114095)
chr8 (577-732)||(7304517-7304671)
chr8 (575-745)||(16394058-16394227)
chr8 (584-745)||(9253908-9254067)
chr8 (581-738)||(37373232-37373388)
chr8 (606-734)||(12203885-12204012)
chr8 (606-734)||(12448313-12448440)
chr8 (575-739)||(43119243-43119405)
chr8 (584-739)||(28626794-28626947)
chr8 (606-739)||(3930261-3930393)
chr8 (577-746)||(29235254-29235422)
chr8 (609-739)||(16785112-16785241)
chr8 (628-735)||(10870382-10870487)
chr8 (663-738)||(9278239-9278312)
chr8 (648-731)||(34192809-34192890)
chr8 (630-736)||(42433597-42433700)
chr8 (642-738)||(17467630-17467724)
chr8 (576-691)||(24843278-24843393)
chr8 (663-739)||(10618044-10618118)
chr8 (686-742)||(12652653-12652707)
chr8 (628-700)||(39406905-39406977)
chr8 (628-707)||(22956761-22956840)
chr8 (630-700)||(22451847-22451916)
chr8 (642-708)||(30933387-30933452)
chr8 (705-739)||(36923789-36923823)
[»] chr5 (27 HSPs)
chr5 (578-745)||(13661828-13661994)
chr5 (578-739)||(34650833-34650993)
chr5 (578-738)||(35504241-35504399)
chr5 (577-734)||(21547393-21547549)
chr5 (578-738)||(35132549-35132707)
chr5 (578-745)||(8787359-8787525)
chr5 (578-732)||(40564404-40564557)
chr5 (606-742)||(12506319-12506454)
chr5 (610-738)||(20175254-20175381)
chr5 (581-744)||(6283583-6283745)
chr5 (578-745)||(11957967-11958133)
chr5 (624-745)||(10054400-10054518)
chr5 (626-739)||(13470177-13470288)
chr5 (606-731)||(11846106-11846230)
chr5 (578-702)||(10956013-10956137)
chr5 (636-744)||(19647717-19647823)
chr5 (628-737)||(9721658-9721765)
chr5 (636-745)||(10069989-10070095)
chr5 (629-738)||(39066987-39067095)
chr5 (597-737)||(31909659-31909793)
chr5 (577-732)||(40057340-40057494)
chr5 (663-745)||(4837277-4837357)
chr5 (578-702)||(4268623-4268747)
chr5 (615-739)||(39069407-39069527)
chr5 (655-738)||(2619635-2619716)
chr5 (629-738)||(19436890-19436995)
chr5 (666-738)||(6284822-6284892)
[»] chr1 (57 HSPs)
chr1 (578-739)||(15227765-15227925)
chr1 (578-744)||(47010014-47010179)
chr1 (585-739)||(3784720-3784873)
chr1 (578-733)||(19031815-19031969)
chr1 (578-745)||(29657791-29657957)
chr1 (578-745)||(14350279-14350443)
chr1 (579-744)||(38162871-38163035)
chr1 (609-745)||(30294412-30294547)
chr1 (578-738)||(51065748-51065907)
chr1 (578-744)||(5694342-5694507)
chr1 (578-744)||(18043183-18043348)
chr1 (584-745)||(12072068-12072228)
chr1 (576-745)||(24178461-24178629)
chr1 (584-745)||(42769996-42770156)
chr1 (605-745)||(3097679-3097818)
chr1 (577-739)||(9266727-9266888)
chr1 (606-745)||(35985649-35985787)
chr1 (602-732)||(6770370-6770499)
chr1 (609-737)||(48071510-48071637)
chr1 (578-739)||(17333284-17333442)
chr1 (578-747)||(38701937-38702101)
chr1 (606-732)||(45431311-45431436)
chr1 (578-732)||(50128172-50128325)
chr1 (636-744)||(29210434-29210540)
chr1 (606-737)||(51368813-51368943)
chr1 (606-739)||(36446353-36446484)
chr1 (609-735)||(23473495-23473620)
chr1 (606-738)||(43286749-43286880)
chr1 (577-747)||(30657626-30657789)
chr1 (577-739)||(41730331-41730495)
chr1 (576-733)||(47532669-47532824)
chr1 (606-733)||(12306950-12307075)
chr1 (606-745)||(29683215-29683354)
chr1 (629-738)||(38335196-38335303)
chr1 (606-745)||(13961232-13961369)
chr1 (606-735)||(8472942-8473070)
chr1 (608-747)||(48383141-48383279)
chr1 (624-735)||(52749632-52749741)
chr1 (606-735)||(45449272-45449400)
chr1 (654-737)||(15282591-15282672)
chr1 (663-745)||(26228213-26228293)
chr1 (642-746)||(39497326-39497428)
chr1 (580-708)||(52431636-52431765)
chr1 (606-737)||(35700680-35700808)
chr1 (578-738)||(3838777-3838936)
chr1 (624-721)||(37315315-37315409)
chr1 (575-739)||(39081827-39081989)
chr1 (666-739)||(39912368-39912439)
chr1 (624-739)||(30217786-30217901)
chr1 (689-746)||(19011108-19011163)
chr1 (663-736)||(28481873-28481940)
chr1 (666-719)||(37503260-37503311)
chr1 (667-702)||(19011057-19011092)
chr1 (683-739)||(10976008-10976062)
chr1 (705-737)||(14881092-14881124)
chr1 (634-684)||(14881036-14881086)
chr1 (577-618)||(38595751-38595792)
[»] chr3 (49 HSPs)
chr3 (578-745)||(52520701-52520867)
chr3 (577-745)||(272240-272407)
chr3 (577-745)||(46352654-46352821)
chr3 (576-738)||(10617282-10617443)
chr3 (585-745)||(49893351-49893510)
chr3 (578-737)||(4168211-4168369)
chr3 (578-745)||(39074439-39074604)
chr3 (585-739)||(858615-858768)
chr3 (630-745)||(41553993-41554106)
chr3 (578-744)||(43786892-43787057)
chr3 (606-739)||(48725297-48725429)
chr3 (578-744)||(42964249-42964414)
chr3 (622-739)||(2119457-2119571)
chr3 (578-745)||(18014692-18014858)
chr3 (606-745)||(49529294-49529435)
chr3 (576-738)||(7468438-7468597)
chr3 (578-743)||(43269739-43269903)
chr3 (608-745)||(53489854-53489990)
chr3 (578-737)||(2938040-2938198)
chr3 (584-739)||(22248912-22249066)
chr3 (606-744)||(20924013-20924150)
chr3 (606-744)||(40362608-40362745)
chr3 (584-744)||(41304026-41304183)
chr3 (606-739)||(42548121-42548253)
chr3 (606-735)||(2505379-2505507)
chr3 (584-733)||(13159929-13160076)
chr3 (579-708)||(33140940-33141070)
chr3 (587-739)||(50359195-50359346)
chr3 (578-738)||(50395563-50395721)
chr3 (577-701)||(6842681-6842806)
chr3 (611-733)||(29241669-29241790)
chr3 (584-742)||(41993626-41993782)
chr3 (608-738)||(11308241-11308369)
chr3 (628-738)||(28139336-28139444)
chr3 (648-744)||(52246603-52246697)
chr3 (609-733)||(38852246-38852372)
chr3 (614-739)||(24488392-24488516)
chr3 (605-737)||(50298972-50299103)
chr3 (600-727)||(31514829-31514954)
chr3 (682-739)||(2391633-2391688)
chr3 (682-739)||(2393394-2393449)
chr3 (678-747)||(52718186-52718252)
chr3 (576-721)||(21010041-21010181)
chr3 (664-702)||(6842604-6842642)
chr3 (577-688)||(52552549-52552659)
chr3 (704-747)||(2362819-2362862)
chr3 (636-717)||(2362880-2362958)
chr3 (531-577)||(20402466-20402512)
chr3 (668-701)||(6842641-6842674)
[»] chr2 (42 HSPs)
chr2 (575-745)||(30486230-30486399)
chr2 (584-745)||(561524-561684)
chr2 (578-739)||(20552957-20553117)
chr2 (578-747)||(31438664-31438832)
chr2 (606-745)||(4381815-4381953)
chr2 (577-744)||(22887771-22887937)
chr2 (578-738)||(3668113-3668272)
chr2 (606-733)||(26387092-26387218)
chr2 (578-745)||(27856396-27856562)
chr2 (578-738)||(22567629-22567788)
chr2 (579-746)||(2898090-2898256)
chr2 (578-745)||(44587922-44588088)
chr2 (606-739)||(6580215-6580347)
chr2 (609-738)||(43637191-43637319)
chr2 (584-739)||(8969413-8969567)
chr2 (578-745)||(22068320-22068485)
chr2 (609-744)||(31390033-31390167)
chr2 (606-733)||(34442560-34442686)
chr2 (575-745)||(32360866-32361035)
chr2 (622-743)||(5093583-5093703)
chr2 (606-739)||(32860128-32860259)
chr2 (628-743)||(11021273-11021386)
chr2 (606-735)||(1859192-1859320)
chr2 (606-739)||(28600993-28601124)
chr2 (586-739)||(38590883-38591034)
chr2 (585-738)||(25782840-25782989)
chr2 (579-737)||(4022480-4022636)
chr2 (636-738)||(26891722-26891822)
chr2 (609-737)||(13574060-13574187)
chr2 (629-734)||(27584769-27584872)
chr2 (630-739)||(38296203-38296310)
chr2 (608-739)||(35851781-35851911)
chr2 (577-721)||(39531868-39532009)
chr2 (630-746)||(5881236-5881354)
chr2 (630-721)||(15079012-15079100)
chr2 (603-738)||(25772137-25772272)
chr2 (608-735)||(29102313-29102439)
chr2 (610-721)||(34123057-34123166)
chr2 (599-701)||(15146694-15146796)
chr2 (630-701)||(10820546-10820615)
chr2 (705-739)||(43993180-43993214)
chr2 (706-748)||(44854467-44854509)
[»] scaffold0524 (1 HSPs)
scaffold0524 (606-744)||(846-983)
[»] scaffold0014 (1 HSPs)
scaffold0014 (576-745)||(68288-68456)
[»] scaffold0264 (1 HSPs)
scaffold0264 (606-745)||(22981-23119)
[»] scaffold0190 (1 HSPs)
scaffold0190 (577-745)||(14916-15083)
[»] scaffold0113 (1 HSPs)
scaffold0113 (577-744)||(40940-41106)
[»] scaffold0003 (1 HSPs)
scaffold0003 (578-745)||(53685-53851)
[»] scaffold0188 (1 HSPs)
scaffold0188 (578-739)||(6110-6270)
[»] scaffold1266 (1 HSPs)
scaffold1266 (577-739)||(318-479)
[»] scaffold1152 (1 HSPs)
scaffold1152 (575-741)||(702-866)
[»] scaffold0674 (1 HSPs)
scaffold0674 (636-739)||(7956-8057)
[»] scaffold0549 (1 HSPs)
scaffold0549 (636-739)||(7314-7415)
[»] scaffold0045 (2 HSPs)
scaffold0045 (606-744)||(50569-50706)
scaffold0045 (648-738)||(53417-53505)
[»] scaffold0002 (1 HSPs)
scaffold0002 (584-733)||(146912-147059)
[»] scaffold0021 (1 HSPs)
scaffold0021 (628-745)||(116224-116339)
[»] scaffold0206 (1 HSPs)
scaffold0206 (636-738)||(11029-11129)
[»] scaffold0038 (1 HSPs)
scaffold0038 (628-734)||(25750-25853)
[»] scaffold0425 (1 HSPs)
scaffold0425 (577-702)||(10771-10897)
[»] scaffold0050 (2 HSPs)
scaffold0050 (606-739)||(69252-69383)
scaffold0050 (666-743)||(33770-33845)
[»] scaffold0325 (1 HSPs)
scaffold0325 (624-739)||(17518-17630)
[»] scaffold0263 (1 HSPs)
scaffold0263 (577-734)||(19584-19740)
[»] scaffold0034 (1 HSPs)
scaffold0034 (602-737)||(95609-95742)
[»] scaffold0007 (1 HSPs)
scaffold0007 (565-698)||(233918-234052)
[»] scaffold0533 (1 HSPs)
scaffold0533 (666-734)||(5070-5136)


Alignment Details
Target: chr4 (Bit Score: 485; Significance: 0; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 1 - 577
Target Start/End: Original strand, 21401675 - 21402255
Alignment:
1 agaggtgagtattgttttattattgta----ttctatctcgctctgaacatataatgaaattatttcatcaaaagattcaaaacacaaaagtaaagtaaa 96  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21401675 agaggtgagtattgttttattattgtagttattctatctcgctctgaacatataatgaaattatttcatcaaaagattcaaaacacaaaagtaaagtaaa 21401774  T
97 attagttttatatattgttaacaaaagatagttttagnnnnnnnnnnnnnnnnntaatgtcatatataatatcaaaatagtttttcttagagataatatc 196  Q
    |||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||    
21401775 attagttttatatattgttaacaaaagatagttttagaaaaaacttcaaaaaaataatgtcatatataatatcaaaatagtttttcttagagataatatc 21401874  T
197 aaaatagttaaaattgtactatctccctgttgaaataacatttttaattaaattacatcagagataagtagagtttcaatttcttatcttgtgggagttt 296  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
21401875 aaaatagttaaaattatactatctccctgttgaaataacatttttaattaaattatatcagagataagtagagtttcaatttcttatcttgtgagagttt 21401974  T
297 cttttgtctaaagagatgcaaattcgtctatggtttatgttcgggaagtgcaacaaccggtaaatttgaattctatgttaaagatctttttgattcatga 396  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21401975 cttttgtctaaagagatgtaaattcgtctatggtttatgttcgggaagtgcaacaaccggtaaatttgaattctatgttaaagatctttttgattcatga 21402074  T
397 aaaaagttcacaaacgaataaagaagacatttcatcatattttggtccctagatagtggtcaaaaggcataataagcgggagcaattgagtggtgcactc 496  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21402075 aaaaagttcacaaacgaataaagaagacattccatcatattttggtccctagatagtggtcaaaaggcataataagcgggagcaattgagtggtgcactc 21402174  T
497 aatcgaaatttcaagagcaggaaaatcacgaagatgcaagtaaatttattaatattgatgaagtcattataaataaagatt 577  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
21402175 aatcaaaatttcaagagcaggaaaatcacgaaaatgcaagtaaatttattaatattgatgaagtcattataaataaagatt 21402255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 577 - 745
Target Start/End: Complemental strand, 54897495 - 54897328
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||||| ||| ||||||||| ||||  |||||||||| ||||||||| ||||||||||||||||| || |||||||||||||    
54897495 tgggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaatta 54897396  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||    
54897395 attatacaatttcaatgcattaactac--tatataatttcctttctcatatccttaaccagtgccccggg 54897328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 576 - 745
Target Start/End: Original strand, 789528 - 789696
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    |||||||  |||||||||||||||  || |||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||    
789528 ttgggtcccgctaaccggtgcctctgggctactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatt 789627  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||| |||||    
789628 aattacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaacccgtgccccggg 789696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 32202481 - 32202646
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    ||||| || |||| ||||||||  ||| | || |||||||||| |||||||||||||||| || ||||||||| ||||||| || |||||||||||||||    
32202481 gggtcctgttaactggtgcctctgggacattgattaagcatatcataaaaggaattattatcataaaaggaaactgtttttgactttattataaattaat 32202580  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||| |||||    
32202581 tacacaatttcaatgcattaactac--tatataatttccttttttatatccttaacccgtgccccggg 32202646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 609 - 739
Target Start/End: Complemental strand, 28755774 - 28755646
Alignment:
609 ggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||| ||||||||||| ||||| || ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||  ||||    
28755774 ggttaagcatactataaaaggaagtattatcataaaaggaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactac--tata 28755677  T
709 taatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||||||    
28755676 taatttcctttttcatatccttaaccagtgc 28755646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 7769124 - 7768958
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || ||||||| ||   ||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||    
7769124 gggtcctgctaaccggtgcccccggggcacgggttaagtatgccataaaagagaattattaccataaaaggaaactgtttttaacattattataaattaa 7769025  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
7769024 ttacacaatttcaatacattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 7768958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 29591375 - 29591209
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||| ||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
29591375 gggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaa 29591276  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
     |||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||||| |||||    
29591275 gtacacaatttcaatgcattaactac--tatataatttccttattcatattcttaaccagtgccccggg 29591209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 577 - 744
Target Start/End: Complemental strand, 43944693 - 43944528
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||  | ||  ||||||||||||||  ||| |||| ||||||||||| ||||||||| ||||||| || |||||||||||||    
43944693 tgggtcttgctaaccggtgccctcgggc-actggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaatta 43944595  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||    
43944594 attacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccgg 43944528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 585 - 747
Target Start/End: Complemental strand, 50619264 - 50619104
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||||||||| |||||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||||||||| ||||||    
50619264 gctaaccggtgcc-cctgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagtacaca 50619166  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||||||||||||||||  |||||||||| ||||||||||| ||||| |||||| |||||||    
50619165 atttcaatgcattaactac--tatataattttctttttcatattcttaatcagtgccccgggag 50619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 577 - 737
Target Start/End: Complemental strand, 12356431 - 12356272
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||||| || | | ||||||||||||||  ||||||| ||||||||| || ||||||||| ||||||| || |||||||||||||    
12356431 tgggtcctgctaaccggtgcccccggaacactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaatta 12356332  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||| | |||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
12356331 attatataatttcaatgtattaactac--tatataatttcctttttcatatccttaaccagt 12356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 16536234 - 16536068
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  |||||||||| |||  ||||||  |||||||||||| ||||||||| ||||||| || ||||||||||||||    
16536234 gggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 16536135  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| | |||| |||||    
16536134 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaatccgtgccccggg 16536068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 608 - 735
Target Start/End: Complemental strand, 37988091 - 37987965
Alignment:
608 tggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    |||||||||||| |||||||| |||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||    
37988091 tggttaagcatactataaaagagaattattacaataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactac--ta 37987994  T
707 tataatttcctttttcatatccttaacca 735  Q
    ||||||||||||||||||| |||||||||    
37987993 tataatttcctttttcatacccttaacca 37987965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 584 - 739
Target Start/End: Original strand, 54655883 - 54656036
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| || ||| ||||||||||||||| |||| || ||||||||| |  ||||| ||||||||||| || ||||||||||||||||||||    
54655883 tgctaaccggtgcc-ccgggacactggttaagcatatcataagagagaattattatcctaaaagaaaattgtttttgactttattataaattaattacac 54655981  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
54655982 aatttcaatacattaactac--tatataatttccttttttatatccttaaccagtgc 54656036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 605 - 739
Target Start/End: Original strand, 24679670 - 24679802
Alignment:
605 tactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    ||||| |||||||||  ||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||     
24679670 tactgattaagcataccataaaagagaattattaccataaa-ggaaattgtttttaactttattataaattaattacacaatttcaatacattaactac- 24679767  T
704 atatataatttcctttttcatatccttaaccagtgc 739  Q
     ||||||||||| |||||||||||||||||||||||    
24679768 -tatataatttcttttttcatatccttaaccagtgc 24679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 577 - 745
Target Start/End: Original strand, 4268821 - 4268988
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||  | ||  ||||||||| ||||  |||||||| ||||||||||| |||| |||| ||||||| || |||||||||||||    
4268821 tgggtcctgctaaccggtgccctcggggcactggttaatcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaatta 4268920  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||    
4268921 attacataatttcaatgcattaactac--tatatagtttcctttttcatacccttaaccagtgccccggg 4268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 628 - 745
Target Start/End: Complemental strand, 15186378 - 15186263
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |    
15186378 ggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatggattaactac--tatataatttcctttttcatacc 15186281  T
728 cttaaccagtgctccggg 745  Q
    |||||||||||| |||||    
15186280 cttaaccagtgccccggg 15186263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 624 - 741
Target Start/End: Complemental strand, 39844046 - 39843931
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||    
39844046 aaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatgcattaactac--tatataatttcatttttca 39843949  T
724 tatccttaaccagtgctc 741  Q
    |||||||||||| |||||    
39843948 tatccttaaccaatgctc 39843931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 18067879 - 18068045
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||| ||||  |||||||| ||||||||||| ||||||||| | ||||| || |||| |||||||||    
18067879 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 18067978  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
18067979 ttacacaattttaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 18068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 32217230 - 32217065
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| || |||||||||||||| ||  || |||||||||||  |||||||| |||||||| || ||||  ||| ||||||| || ||||||||||||||    
32217230 gggtcctgttaaccggtgcctccggggcacaggttaagcataccataaaagggaattattatcataaaaa-aaactgtttttgactttattataaattaa 32217132  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||    
32217131 ttacacaatttcaatgcattaactac--tatataatttccttttttatatccttaaccagtgccccggg 32217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 577 - 739
Target Start/End: Complemental strand, 6164280 - 6164120
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||| |  | || |||||||||||||||  ||||||| |||||||||||| ||||||||| |||||||  | |||||||||||||    
6164280 tgggtcctgctaaccggtgtcctcggggtactggttaagcataccataaaagagaattattaccataaaaggaaactgttttttgctttattataaatta 6164181  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||  |||||||||| | |||| |||||||||||||||||    
6164180 attacacaatttcaatgcattaactac--tatataattttc-ttttgatatccttaaccagtgc 6164120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 578 - 744
Target Start/End: Original strand, 33108673 - 33108837
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  || |||||||||||  |||||| ||||||||||||| ||||||||| ||||||| || ||||||| ||||||    
33108673 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaa 33108772  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||| || ||||||||||||||||||   |||||||||||||||||||||| |||||||||||| ||||    
33108773 ttatactatttcaatgcattaacta--ttatataatttcctttttcatat-cttaaccagtgccccgg 33108837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 4089300 - 4089168
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  ||||||| |||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
4089300 actggttaaacataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac-- 4089203  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||| |||||||||| |||||| ||||||    
4089202 tatataattttctttttcatacccttaatcagtgc 4089168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 578 - 734
Target Start/End: Complemental strand, 4220380 - 4220226
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||||||||||||||||||| | |   ||  ||||||||||  |||||||| ||||||||| | ||||| ||||||||||| || ||||||||||||||    
4220380 gggtcatgctaaccggtgcctacggagcacatgttaagcataccataaaagggaattattac-ataaaagaaaattgtttttgactttattataaattaa 4220282  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
4220281 ttacacaatttcaatacattaactac--tatataatttcctttttcatatccttaacc 4220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 605 - 737
Target Start/End: Original strand, 19503132 - 19503263
Alignment:
605 tactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    |||| ||||||||||  |||||||| ||||||||| | ||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||      
19503132 tactagttaagcataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaacta-- 19503229  T
704 atatataatttcctttttcatatccttaaccagt 737  Q
     |||||||||||||||||||||||||||||||||    
19503230 gtatataatttcctttttcatatccttaaccagt 19503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 43202384 - 43202549
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||| ||  ||||||| |||||||||||| ||||| ||| ||||||| || ||||||||||||||    
43202384 gggtcctgctaaccggtgcccccgggc-actggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaa 43202482  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||| |||||||||| |||  ||||||||||||||||||||| ||||||| ||||| |||||    
43202483 ttacacaattttaatgcattaattac--tatataatttcctttttcatacccttaactagtgccccggg 43202549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 608 - 739
Target Start/End: Original strand, 42898774 - 42898906
Alignment:
608 tggttaagcatattataaaag-gaattattaccaca--aaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||  ||||||| ||||||||||||||  ||| |||| | ||||| || ||||||||||||||||||||||||||||||||||||||||      
42898774 tggttaagcataccataaaagagaattattaccacataaaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactac-- 42898871  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |||||||||||||||||    
42898872 tatataatttccttttttatatccttaaccagtgc 42898906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 745
Target Start/End: Original strand, 47231881 - 47232038
Alignment:
587 taaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaat 685  Q
    |||||||||| ||| || || ||||||| ||||  |||||||| |||||||| || ||||||||| ||||||| || ||||||| |||||||||||  ||    
47231881 taaccggtgcttccggggtattggttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattatcaattaattacattat 47231980  T
686 ttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||    
47231981 ttcaatgcattaacta--ttatataatttcctttttcacatccttaaccagtgctccggg 47232038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 624 - 739
Target Start/End: Original strand, 54945826 - 54945938
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    |||||||||||| |||| |||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||  | |||||||||||||||||||    
54945826 aaaaggaattat-accataaaacgaaattgtttttgactttattataaattaattacacaatttcaatacattaact--gctatataatttcctttttca 54945922  T
724 tatccttaaccagtgc 739  Q
    ||||||||||||||||    
54945923 tatccttaaccagtgc 54945938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 578 - 735
Target Start/End: Complemental strand, 36395285 - 36395129
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||| |||||| || ||  ||||||||||||||  |||||||| |||||||| || ||||| ||| || |||| || ||||||||||||||    
36395285 gggtcctgctaactggtgcccccagggcactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaa 36395186  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||  |||||||    
36395185 ttacacaatttcaatgcattaactac--tatataatttcctttttcatatttttaacca 36395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 584 - 708
Target Start/End: Original strand, 30387140 - 30387265
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||  ||| || || || |||||||||| |||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||    
30387140 tgctaaccggtgtttccagggtattgattaagcatatcataaaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacac 30387239  T
683 aatttcaatgcattaactacgatata 708  Q
    |||||||||||||||||||| |||||    
30387240 aatttcaatgcattaactactatata 30387265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 587 - 738
Target Start/End: Original strand, 53655887 - 53656037
Alignment:
587 taaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaat 685  Q
    ||||||||||||||  |  |||| |||||||||  |||||| ||| ||||||||| ||||  ||||| |||||||| |||||||||||||||||||||||    
53655887 taaccggtgcctccgaggcactgattaagcataccataaaatgaaattattaccataaaataaaattatttttaactttattataaattaattacacaat 53655986  T
686 ttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||| |||||||||   ||||||||||| ||||||||||||||||| ||||    
53655987 ttcaatacattaacta--ttatataatttcttttttcatatccttaacaagtg 53656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 738
Target Start/End: Original strand, 31680510 - 31680622
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    |||| |||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||   ||| ||| || ||||||||    
31680510 aaaatgaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaacta--ttatgtaactttctttttca 31680607  T
724 tatccttaaccagtg 738  Q
    || ||||||||||||    
31680608 tacccttaaccagtg 31680622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 606 - 731
Target Start/End: Complemental strand, 46149097 - 46148973
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  ||||||| |||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||| ||||| ||       
46149097 actggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaatta--t 46149000  T
705 tatataatttcctttttcatatcctta 731  Q
    |||||||||||||||||||||| ||||    
46148999 tatataatttcctttttcatattctta 46148973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 577 - 748
Target Start/End: Original strand, 5091611 - 5091779
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||  |||||||| ||||||||| | ||||||||| ||||| | || |||||||||||||    
5091611 tgggtcctgctaaccggtgc-tcccggacactggttaagcatac-ataaaagggaattattactataaaaggaaactgtttatgactttattataaatta 5091708  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggagt 748  Q
    |||||||||||| |||  ||||| ||   ||||||||||  |||||||||| |||||||||||| ||||||||    
5091709 attacacaattttaatatattaatta--ttatataattttatttttcatattcttaaccagtgccccgggagt 5091779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 606 - 745
Target Start/End: Original strand, 30154191 - 30154328
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||||| |  ||||||| ||||||||| || | ||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||      
30154191 actggttaagcacaccataaaagagaattattatcatataaggaaattgtttttgattttattataaattaattacataatttcaatacattaactac-- 30154288  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||| |||||| ||||| |||||    
30154289 tatataatttcctttttcatat-cttaactagtgccccggg 30154328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 636 - 739
Target Start/End: Complemental strand, 54054675 - 54054574
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||||||||||     
54054675 taccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaacta--ttatataatttcttttttcatatccttaaccg 54054578  T
736 gtgc 739  Q
    ||||    
54054577 gtgc 54054574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 628 - 738
Target Start/End: Original strand, 52533836 - 52533944
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||||||| ||||||  || ||||||| |||||||||  |||||||| ||||||||||||  ||||||||||||||||||||||     
52533836 ggaattattaccataaaaggaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactac--tatataatttcctttttcatatt 52533933  T
728 cttaaccagtg 738  Q
    |||||||||||    
52533934 cttaaccagtg 52533944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 620 - 739
Target Start/End: Complemental strand, 49915303 - 49915185
Alignment:
620 ttataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctt 718  Q
    |||||||||||| ||||||  | ||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||| |||  ||||||| || |||    
49915303 ttataaaaggaaattattattataaaaggaaactgttttttactttattataaattaattacacaatttcaatacattaattac--tatataaatttctt 49915206  T
719 tttcatatccttaaccagtgc 739  Q
    |||||||||||||| ||||||    
49915205 tttcatatccttaatcagtgc 49915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 647 - 742
Target Start/End: Complemental strand, 42815225 - 42815132
Alignment:
647 gaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctcc 742  Q
    |||| ||||||| || ||||||||||||||||||| ||||||||| ||||||||| |  |||||||||||||||||||||||||||||||| ||||    
42815225 gaaactgtttttgactttattataaattaattacataatttcaatacattaactatg--atataatttcctttttcatatccttaaccagtactcc 42815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 611 - 744
Target Start/End: Original strand, 3783534 - 3783666
Alignment:
611 ttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatat 709  Q
    |||||||||  |||||||| ||||||||||| ||||| ||| ||||||| || ||||||| ||||||||| ||||||| ||||||||||||||  |||||    
3783534 ttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactac--tatat 3783631  T
710 aatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||| ||||||||||  |||||| |||| ||||    
3783632 aatttcatttttcatatgtttaaccggtgccccgg 3783666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 577 - 699
Target Start/End: Original strand, 39877246 - 39877371
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatatt--ataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||| |||||||| |||||||| ||  |||||||||||||||   ||||||| |||||||||| | |||| |||| ||||||| || |||||||||||    
39877246 tgggtcctgctaacccgtgcctccggggcactggttaagcatataccataaaagagaattattactataaaatgaaactgtttttgactttattataaat 39877345  T
674 taattacacaatttcaatgcattaac 699  Q
    |||||||||||||||||| |||||||    
39877346 taattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 635 - 744
Target Start/End: Complemental strand, 55882811 - 55882705
Alignment:
635 ttaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    |||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||||  |||||||||||||||||     
55882811 ttaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattac--tatataattt-ttttttcatatccttaacg 55882715  T
735 agtgctccgg 744  Q
    ||||| ||||    
55882714 agtgccccgg 55882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 578 - 698
Target Start/End: Complemental strand, 16821038 - 16820917
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||||| ||||||||| ||||||||| ||  | | || ||||||||| ||||    
16821038 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaa 16820939  T
677 ttacacaatttcaatgcattaa 698  Q
    ||||| ||||||||||||||||    
16820938 ttacagaatttcaatgcattaa 16820917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 636 - 739
Target Start/End: Original strand, 46688264 - 46688370
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcc-----tttttcatatcctt 730  Q
    ||||| ||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||||  | |||||||| |     ||||||||||||||    
46688264 taccataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactac--tgtataattttctttaatttttcatatcctt 46688361  T
731 aaccagtgc 739  Q
    |||||||||    
46688362 aaccagtgc 46688370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 738
Target Start/End: Complemental strand, 50603387 - 50603254
Alignment:
605 tactggttaagcatattataaaag-gaattattaccacaaaaggaaat-tgtttttaaccttattataaattaattacacaatttcaatgcattaactac 702  Q
    |||||||||||||||  ||||||| ||||||||| || ||||  |||  ||||||| || |||||||||||||||||||||||||||||||||||| ||     
50603387 tactggttaagcataccataaaagagaattattatcataaaaaaaaaactgtttttgacattattataaattaattacacaatttcaatgcattaatta- 50603289  T
703 gatatataatttcctttttcatatccttaaccagtg 738  Q
      |||| ||||||||||| || | ||||||||||||    
50603288 -ttatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 667 - 739
Target Start/End: Complemental strand, 50167685 - 50167617
Alignment:
667 tataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||||||||||||    |||||||| |||||||||||| |||||||||||    
50167685 tataaattaattacacaatttcaatgcattaactac----tataattttctttttcatatctttaaccagtgc 50167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 739
Target Start/End: Original strand, 1432550 - 1432702
Alignment:
580 gtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaatt--attaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||||||||||||||| ||   | |||||||||||||||||||||||| |||||  |||| || ||||| ||| ||||||| |  ||||||||||||||    
1432550 gtcatgctaaccggtgcttctgaggtactggttaagcatattataaaagagaattttattatcataaaag-aaactgttttttattttattataaattaa 1432648  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||   ||    ||||| ||||||||   |||||||||||||||||||||||||||||||||||    
1432649 tt---ca----caatgtattaactat--tatataatttcctttttcatatccttaaccagtgc 1432702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 642 - 721
Target Start/End: Complemental strand, 53268840 - 53268764
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||| ||||||||||| || || |||||||||||||||||||||| |||||||||||||  |||||||||||| |||||    
53268840 aaaagaaaattgtttttgacttt-ttataaattaattacacaattttaatgcattaacta--atatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 610 - 734
Target Start/End: Complemental strand, 52697205 - 52697083
Alignment:
610 gttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||| ||||| ||||||| |||||||||| | ||| | ||||| ||||| || ||||||||||||| ||| | ||||| |||| |||||||||  ||||    
52697205 gttaaacatatcataaaagagaattattacaataaaggaaaattatttttgactttattataaatta-ttatataattttaatgtattaactac--tata 52697109  T
709 taatttcctttttcatatccttaacc 734  Q
    ||||||  ||||||||||||||||||    
52697108 taattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 701
Target Start/End: Complemental strand, 31517324 - 31517227
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaa-attgtttttaaccttattataaattaattacacaatttcaatgcattaacta 701  Q
    ||||||||||||||  ||| ||| |||||||||||| ||||  || ||| ||||| || ||||||| |||||||||||| ||||||||||||||||||    
31517324 actggttaagcataccatataagagaattattaccataaaaaaaacattatttttgactttattatcaattaattacactatttcaatgcattaacta 31517227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 684
Target Start/End: Original strand, 53003956 - 53004063
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||| | |  ||| |||| |||||||||| ||||||| |||||||||    ||||||||||| ||||| || |||||||| |||||    
53003956 gggtcctgctaaccggtgtcccggggacactgattaagcatatcataaaagagaattattattttaaaaggaaattatttttgactttattatacattaa 53004055  T
677 ttacacaa 684  Q
    ||||||||    
53004056 ttacacaa 53004063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 708
Target Start/End: Complemental strand, 41265556 - 41265514
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatata 708  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
41265556 ttataaattaattacacaatttcactgcattaactactatata 41265514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 630 - 688
Target Start/End: Complemental strand, 8133840 - 8133782
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttc 688  Q
    ||||||||||| ||||| ||| | ||||| || ||||||||||||||||||||| ||||    
8133840 aattattaccataaaagaaaactatttttgactttattataaattaattacacattttc 8133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 8e-51; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 577 - 745
Target Start/End: Original strand, 29993486 - 29993653
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||| ||||||| ||| ||||||||||||||  |||||||| ||||||||||| |||||||||||| |||| || |||||||||||||    
29993486 tgggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaatta 29993585  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||||    
29993586 attacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccggtgccccggg 29993653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 576 - 739
Target Start/End: Original strand, 24798401 - 24798563
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| ||||||| |||||| || ||  |||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||    
24798401 ttgggtcctgctaactggtgcccccggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaatt 24798500  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||    
24798501 aattacacaatttcaatgcattaactac--tatataatttcctttttcatatcctcaacaagtgc 24798563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 577 - 745
Target Start/End: Complemental strand, 24438664 - 24438497
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||||||||    
24438664 tgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 24438565  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||| ||||||| ||||| |||||    
24438564 attacataatttcaatgcattaactac--tatatagtttcctttttcatacccttaactagtgccccggg 24438497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 606 - 746
Target Start/End: Original strand, 23363195 - 23363334
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  ||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||      
23363195 actggttaaacataccataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatgcattaactac-- 23363292  T
705 tatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    |||| ||||||||||||| |||||||||| ||||||||||||    
23363293 tatacaatttcctttttcttatccttaacgagtgctccggga 23363334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 584 - 739
Target Start/End: Complemental strand, 1737159 - 1737006
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||||||||| ||| ||  ||||||||||||||  |||||| ||||||||| || ||| ||||| |||||||||| ||||||| ||||||||||||     
1737159 tgctaaccggtgcttccggggcactggttaagcataccataaaatgaattattatcataaatggaaaatgtttttaactttattatcaattaattacact 1737060  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||||    
1737059 atttcaatgcattaacta--ttatataatttcatttttcatatccttaaccagtgc 1737006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 610 - 744
Target Start/End: Complemental strand, 5239439 - 5239306
Alignment:
610 gttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||  |||||||| ||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||    
5239439 gttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac--tata 5239342  T
709 taatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||| | ||||||||||||||||    
5239341 taatttcctttttcataccattaaccagtgctccgg 5239306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 630 - 745
Target Start/End: Complemental strand, 30810788 - 30810675
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcct 729  Q
    ||||||||||| ||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
30810788 aattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatcct 30810691  T
730 taaccagtgctccggg 745  Q
    |||||||||| |||||    
30810690 taaccagtgccccggg 30810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 34606447 - 34606282
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||  || ||  || |||||||||||  |||||||| ||||||||||| ||||||||| || |||| || ||||||||||||||    
34606447 gggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaa 34606348  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    || ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||    
34606347 tttcacaatttcaatgcattaattac--tatataatttcctttttcatatccttaaccagtgccccgg 34606282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 605 - 742
Target Start/End: Original strand, 8754612 - 8754748
Alignment:
605 tactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    |||| ||||||||||  |||||||||| ||||||||| ||||  ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||     
8754612 tactagttaagcataccataaaaggaaattattaccataaaacaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac- 8754710  T
704 atatataatttcctttttcatatccttaaccagtgctcc 742  Q
     ||||||||||| ||||||||||||||||||||||||||    
8754711 -tatataatttcatttttcatatccttaaccagtgctcc 8754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 579 - 737
Target Start/End: Original strand, 11686324 - 11686482
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaat--tgtttttaaccttattataaatta 675  Q
    |||| ||||||||||||||||| || ||| |||||||||||| ||||||| |||||||||||| ||||  |||   ||||||| || |||||||||||||    
11686324 ggtcctgctaaccggtgcctccggg-tacaggttaagcatatcataaaagagaattattaccataaaaaaaaaaactgtttttgactttattataaatta 11686422  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
11686423 attacacaatttcaatgcattaactac--tatataatttccttttttatatccttaaccagt 11686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 608 - 744
Target Start/End: Complemental strand, 47083211 - 47083076
Alignment:
608 tggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||| ||||| |||||||| ||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||  ||    
47083211 tggttaaacatatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaattacacaatttcaatacattaactac--ta 47083114  T
707 tataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||| |||||||||||||||||| ||| |||||    
47083113 tataatttcttttttcatatccttaaccggtgttccgg 47083076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 34333469 - 34333304
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||| ||||  |||||| ||||||||||||| ||||||||| |||||| | | ||||||||||||||    
34333469 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgttttga-cattattataaattaa 34333371  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||| |||||    
34333370 ttacacaatttcaatgcattaattac--tatataatttcctttttcatacccttaaccagtgccccggg 34333304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 608 - 738
Target Start/End: Complemental strand, 28588065 - 28587936
Alignment:
608 tggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||| ||||  |||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||| |||||  ||    
28588065 tggttaaacataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactac--ta 28587968  T
707 tataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||||||||    
28587967 tataatttcctttttcatatccttaaccagtg 28587936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 584 - 745
Target Start/End: Complemental strand, 18486141 - 18485981
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||| || | ||  || |||||||||||  |||||| ||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
18486141 tgctaaccggtgtcttcggggcacgggttaagcataccataaaatgaaattattaccataaaaggaaactgtttttaactttattataaattaattacac 18486042  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||| |||||| |||  ||||||||||||||||  ||||||||||||||||| |||||    
18486041 aatttcaatacattaattac--tatataatttccttttcaatatccttaaccagtgccccggg 18485981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 576 - 739
Target Start/End: Complemental strand, 4628754 - 4628592
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| |||||||||||||| |   |  ||||||||||||||  |||||||| ||||||||||| ||||| ||| ||||| | || ||||||||||||    
4628754 ttgggtcctgctaaccggtgcccctaaggcactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaatt 4628655  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||    
4628654 aattaaacaatttcaatgtattaactac--tatataatttcctttttcatatccttaaccggtgc 4628592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 606 - 745
Target Start/End: Original strand, 12218464 - 12218602
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  ||||||| |||||||||||| ||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||||      
12218464 actggttaaacataccataaaagagaattattaccataaaaggaaactattttttattttattataaattaattacacaatttcaatgcattaactac-- 12218561  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
12218562 tatataatttcctttttcatatacttatccagtgccccggg 12218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 606 - 745
Target Start/End: Original strand, 43594064 - 43594202
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| ||||||||| || || |||||| ||||||| || ||||||||||||||||| |||||||||||||||||||||       
43594064 actggttaagcataccataaaagagaattattatcataagaggaaactgtttttgactttattataaattaattatacaatttcaatgcattaacta--t 43594161  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
43594162 tatataatttccttttttatatccttaaccagtgttccggg 43594202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 576 - 738
Target Start/End: Original strand, 525074 - 525234
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| ||||||||||||| ||| |  |||||||||| ||||| ||||||| |||||||||||| ||||||||| ||||||| |  ||||||||||||    
525074 ttgggtcctgctaaccggtgc-tccggagtactggttaaacatatcataaaagagaattattaccataaaaggaaactgtttttgattttattataaatt 525172  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||| ||||||||||||||||||||||  | |||| ||| |||||||||||| ||||||||||    
525173 aattatacaatttcaatgcattaactac--tgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 606 - 736
Target Start/End: Complemental strand, 45045928 - 45045799
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| |||||||| || ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||      
45045928 actggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaattac-- 45045831  T
705 tatataatttcctttttcatatccttaaccag 736  Q
    ||||||||||| ||||||||| ||||||||||    
45045830 tatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 628 - 746
Target Start/End: Complemental strand, 47839627 - 47839511
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||   ||||||| |||||||||||||||    
47839627 ggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaacta--ttatataaattcctttttcatatc 47839530  T
728 cttaaccagtgctccggga 746  Q
    |||||||||| | ||||||    
47839529 cttaaccagtaccccggga 47839511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 579 - 746
Target Start/End: Complemental strand, 5729531 - 5729365
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| |||||||| ||||||||  |  |||||||||||||   ||||||| |||||||||| | ||||| ||||| ||||| || ||||||| |||||||    
5729531 ggtcctgctaacctgtgcctccgaggcactggttaagcatgccataaaagagaattattactataaaagaaaattatttttgactttattatcaattaat 5729432  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    ||||  |||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||    
5729431 tacattatttcaatacattaactat--tatataatttcctttttcatatccttaaccagtgctccggga 5729365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 47657136 - 47657006
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||| |||||||||  |||||||| ||||||||||| ||||  ||| || ||||||| |||||||||||||||||||||||||||||||||||| |||      
47657136 actgattaagcataccataaaagggaattattaccataaaa--aaactgcttttaactttattataaattaattacacaatttcaatgcattaattac-- 47657041  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||| ||||||||||||||||||||||||    
47657040 tatataattttctttttcatatccttaaccagtgc 47657006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 42044294 - 42044453
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    |||||||||||||||||||| || ||  ||||||||| ||||  |||||||| ||||||||||| ||||| ||| ||||||| || ||||||||||||||    
42044294 gggtcatgctaaccggtgcc-ccggggcactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgacattattataaattaa 42044392  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||  |||||||||  ||||||||||| ||||||||| | |||||| ||||    
42044393 ttacacaatttcaatctattaactac--tatataatttcttttttcatacctttaaccggtgc 42044453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 606 - 735
Target Start/End: Original strand, 13064904 - 13065033
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgttttta-accttattataaattaattacacaatttcaatgcattaactacg 703  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||| |||||||  || |||||||||||||||||||||| |||||| |||||| ||      
13064904 actggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattacacaaattcaatacattaaatat- 13065002  T
704 atatataatttcctttttcatatccttaacca 735  Q
     |||||||||||||||||||||||||||||||    
13065003 -tatataatttcctttttcatatccttaacca 13065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 636 - 734
Target Start/End: Original strand, 34546373 - 34546469
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||||| ||||| ||| ||||||| || ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
34546373 taccataaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacc 34546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 606 - 738
Target Start/End: Original strand, 7689228 - 7689359
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| |||  ||||||| |||||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||| |||      
7689228 actggttaagtataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattac-- 7689325  T
705 tatataatttcctttttcatatccttaaccagtg 738  Q
    | || |||||||||||| |||||||||| |||||    
7689326 tgtaaaatttccttttttatatccttaatcagtg 7689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 642 - 739
Target Start/End: Original strand, 27456178 - 27456273
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||    
27456178 aaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactac--tatataatttctttttccatatccttaaccagtgc 27456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 606 - 733
Target Start/End: Complemental strand, 18117301 - 18117175
Alignment:
606 actggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||| ||| ||||||| | ||||  ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||      
18117301 actggttaagcataccataaaatgaaattattactataaaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaactac-- 18117204  T
705 tatataatttcctttttcatatccttaac 733  Q
    ||||||||||||| |||||||| ||||||    
18117203 tatataatttcctctttcatatacttaac 18117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 628 - 743
Target Start/End: Complemental strand, 46716773 - 46716660
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    |||||||||| || ||||||||| | ||||| || ||||||||||||||||||| ||||||| |||||||| ||   ||||||||||||||||| |||||    
46716773 ggaattattatcataaaaggaaaatatttttgactttattataaattaattacataatttcagtgcattaagta--ttatataatttccttttttatatc 46716676  T
728 cttaaccagtgctccg 743  Q
     ||||||| |||||||    
46716675 tttaaccaatgctccg 46716660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 738
Target Start/End: Complemental strand, 33636610 - 33636479
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||  |||||||||||| ||||  ||| | ||||| || |||||||||||||||||||||||||||||| ||||| ||       
33636610 actggttaagcataccataaaatagaattattaccataaaaataaactattttttactttattataaattaattacacaatttcaatgaattaatta--t 33636513  T
705 tatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||| ||||||||||| |||||| ||||    
33636512 tatataattttctttttcatattcttaactagtg 33636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 642 - 744
Target Start/End: Original strand, 37631607 - 37631707
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctc 741  Q
    ||||||||| ||||||| |  ||||||||||||||||||| ||||| |||||||||| ||   ||||||||||||||||| |||||||||||| |||| |    
37631607 aaaaggaaactgtttttgattttattataaattaattacataattttaatgcattaatta--ttatataatttccttttttatatccttaacccgtgccc 37631704  T
742 cgg 744  Q
    |||    
37631705 cgg 37631707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 642 - 708
Target Start/End: Original strand, 37674169 - 37674235
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||    
37674169 aaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatata 37674235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 630 - 720
Target Start/End: Complemental strand, 22739957 - 22739868
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttatt-ataaattaattacacaatttcaatgcattaactacgatatataatttcctttt 720  Q
    ||||||||||| ||||| ||| |||||||||  || || |||||||||||||||||||||||||||||||||||  |||||| |||||||||    
22739957 aattattaccataaaagaaaactgtttttaattttttttataaattaattacacaatttcaatgcattaactac--tatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 734
Target Start/End: Complemental strand, 28262182 - 28262062
Alignment:
608 tggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||||||||  ||||||  |||||||||| | ||||||||| ||||||| |  ||||||| ||||||||||| ||||||||     |||||||  ||    
28262182 tggttaagcataccataaaaaagaattattactataaaaggaaactgtttttgattttattatcaattaattacataatttcaa-----taactac--ta 28262090  T
707 tataatttcctttttcatatccttaacc 734  Q
    ||||||||||||||||||||||||||||    
28262089 tataatttcctttttcatatccttaacc 28262062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 742
Target Start/End: Original strand, 23357711 - 23357870
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| |||||| ||||| |||| ||  ||||||||||||||| ||| ||| ||||||||| || ||| ||||| ||||||| || || ||||||||||||    
23357711 ggtcttgctaatcggtgtctccggggcactggttaagcatatcatagaagagaattattatcataaatggaaactgtttttgacttttttataaattaat 23357810  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctcc 742  Q
    || ||   |  ||||||||||||||  |||| ||||| |||||||||||||||||| ||| ||||    
23357811 tatac---tgaaatgcattaactac--tatacaattttctttttcatatccttaacgagtactcc 23357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 738
Target Start/End: Complemental strand, 4087720 - 4087650
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||| |||| |||||||||||||||||||  |||||||||||||||||  ||| |||||||||||    
4087720 ttataaattaatcacactatttcaatgcattaactac--tatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 652 - 735
Target Start/End: Original strand, 29835779 - 29835860
Alignment:
652 tgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    |||||||||| |||||| ||||||||||| |||||| ||| |||||||||   ||||||| ||||||||||||||| |||||||    
29835779 tgtttttaactttattacaaattaattacgcaattttaatacattaacta--gtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 4100612 - 4100684
Alignment:
665 attataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||| ||| ||||| ||| |||||| |||  |||||||||||||||||||||||||||||| ||||    
4100612 attataaattaataacataattttaatacattaattac--tatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 739
Target Start/End: Original strand, 18469993 - 18470099
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcct 729  Q
    ||||||||||| |||| | || ||||||| || || | ||||||||||||||||||||||||| |||||||  | |||||||||||||||||  ||| ||    
18469993 aattattaccataaaatgtaactgtttttgacttt-tcataaattaattacacaatttcaatgtattaact--gctatataatttcctttttagtatgct 18470089  T
730 taaccagtgc 739  Q
    ||||| ||||    
18470090 taaccggtgc 18470099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 734
Target Start/End: Complemental strand, 3021988 - 3021922
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    |||||||||||||| |||||||||||| ||||||||   ||||||||||||||||| |||| |||||||    
3021988 ttataaattaattatacaatttcaatgtattaacta--gtatataatttcctttttaatatgcttaacc 3021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 701
Target Start/End: Complemental strand, 13556553 - 13556474
Alignment:
622 ataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaacta 701  Q
    |||||||||| ||||||||| |||| || |||||| || || || ||||||||||||||||||||||||||||||| ||||    
13556553 ataaaaggaaattattaccataaaaagatattgttattgacttt-ttataaattaattacacaatttcaatgcattgacta 13556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 666 - 737
Target Start/End: Complemental strand, 36437474 - 36437405
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||||||||||||| |||||||||||| |||| ||||  ||||||||| |||||||  ||||||||||||||    
36437474 ttataaattaattaaacaatttcaatgaattacctac--tatataattacctttttagtatccttaaccagt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 688
Target Start/End: Original strand, 47118041 - 47118100
Alignment:
629 gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttc 688  Q
    |||||||||||| ||||||||| || | || || ||||||||||||||||||||||||||    
47118041 gaattattaccataaaaggaaactgctcttgactttattataaattaattacacaatttc 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 734
Target Start/End: Complemental strand, 38128478 - 38128322
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||||||||||||||||||||| ||  ||||||||||||||  | |||||| |||| |||||| |||||||| || || || || |  ||||| |||||    
38128478 gggtcatgctaaccggtgcctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagtt-ttgttgacttatttatagattaa 38128380  T
677 ttacacaa-tttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||| |||| |||||||||| ||| ||  ||||| | ||||||||||  |||||||||||    
38128379 ttaaacaattttcaatgcaataattaacatata-attttcctttttattatccttaacc 38128322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 734
Target Start/End: Original strand, 18220527 - 18220593
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    |||||||||||||||||||||| ||| |||||| |||  |||||||||| ||||||  |||||||||||    
18220527 ttataaattaattacacaattttaatacattaattac--tatataattttctttttagtatccttaacc 18220593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 666 - 721
Target Start/End: Original strand, 18220759 - 18220812
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||||||||||||||||||||| || |||||| |||  |||||||||||||||||    
18220759 ttataaattaattacacaatttctatacattaattac--tatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 736
Target Start/End: Original strand, 18220624 - 18220688
Alignment:
670 aaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccag 736  Q
    |||||||||||||||||||||| || ||| |||  |||||||||||||||||  ||| |||||||||    
18220624 aaattaattacacaatttcaatacagtaattac--tatataatttcctttttagtattcttaaccag 18220688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 649
Target Start/End: Complemental strand, 6097524 - 6097451
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaa 649  Q
    ||||||||||||||| |||||||| ||  || |||||||||||| | |||||| |||| |||||| ||||||||    
6097524 tgggtcatgctaaccagtgcctccggggcacgggttaagcatataaaaaaaggaaattcttaccataaaaggaa 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 8e-51; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 583 - 747
Target Start/End: Complemental strand, 2350833 - 2350670
Alignment:
583 atgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattaca 681  Q
    ||||||||||||| |||| || |||||||||||||||| |||||||| ||||||||||| ||||||||| | ||||| || |||||||||||||||||||    
2350833 atgctaaccggtgtctccggggtactggttaagcatatcataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattaca 2350734  T
682 caatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||    
2350733 caatttcaatacattaactac--tatataatttcctttttcatatccttaaccagtgccccgggag 2350670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 392282 - 392116
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  ||||||| |||||||||||| ||||||||| ||||||| || ||||||||||||||    
392282 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaa 392183  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
392182 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 392116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 577 - 739
Target Start/End: Original strand, 12145116 - 12145277
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||||| |   |||||||||||||| ||||||||||| |||||| || ||||||||| ||||||| || |||||||||||||    
12145116 tgggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaatta 12145215  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
12145216 attacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacaagtgc 12145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 23402324 - 23402159
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  || |||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
23402324 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaa 23402225  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    || ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||    
23402224 tttcacaatttcaatgcattaattac--tatataatttcctttttcatatccttaaccagtgccccgg 23402159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 26467124 - 26467284
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||||||||||||||||||||| ||  ||||||||  ||||  |||||||| ||||||||||| ||||||||| | ||||| || ||||||||||||||    
26467124 gggtcatgctaaccggtgcctccggggcactggttagacataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaa 26467223  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
26467224 ttacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccggtgc 26467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 32929508 - 32929674
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
32929508 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 32929607  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||| ||| |||||    
32929608 ttacacaatttcaatgcattaatta--atatataatttcctttttcatacccttaaccattgccccggg 32929674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 4215881 - 4215715
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||| |||| || ||  ||||||||||||||  |||||||||| ||||||||| ||||||||| ||||||| || ||||||||||||||    
4215881 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 4215782  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||  |||||||||||| |||||    
4215781 ttacacaatttcaatgcattaacta--ttatataatttcctttttcatactcttaaccagtgccccggg 4215715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 577 - 739
Target Start/End: Complemental strand, 3515953 - 3515792
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||||| |  ||  || |||||| ||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||||||||    
3515953 tgggtcctgctaaccggtgcccctggggcacaggttaaacataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 3515854  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
3515853 attacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgc 3515792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 18276612 - 18276775
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatatta---taaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    ||||| |||||||||||||| |  ||  |||||||||||||| ||   ||||||||| ||||||||| ||||||||| ||||||| || |||||||||||    
18276612 gggtcctgctaaccggtgccccaggggcactggttaagcataataccataaaaggaaattattaccataaaaggaaactgtttttgactttattataaat 18276711  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
18276712 taattacacaaattcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgc 18276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 578 - 737
Target Start/End: Complemental strand, 2581138 - 2580980
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||  || || || ||||||||||||  |||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||    
2581138 gggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaa 2581039  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||||    
2581038 ttacataatttcaatgcattaactac--tatataatttccttttttatatcattaaccagt 2580980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 585 - 739
Target Start/End: Original strand, 13416967 - 13417122
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttat---tataaattaattac 680  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| || ||||   ||||||||||||||    
13416967 gctaaccggtgcctccgggc-actggttaagcatattataaaagagaattattaccataaaagaaaactgtttttgactttattattataaattaattac 13417065  T
681 acaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||    
13417066 acaatttcaatacattaacta--atatataatttcctttttcatatccttaactagtgc 13417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 584 - 735
Target Start/End: Original strand, 32985199 - 32985349
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| || ||  ||||||||||||||  |||||||| |||||||| || ||||||||| ||||||| || ||||||||||||||||||||    
32985199 tgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacac 32985298  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||||||| ||||||||||  ||||||||||||||||| |||||||||||||    
32985299 aatttcaatacattaactac--tatataatttccttttttatatccttaacca 32985349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 606 - 733
Target Start/End: Original strand, 34851877 - 34852003
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||      
34851877 actggttaagcatattataaaagagaattattactataaaaggaaattatttttgactttattataaatcaattacacaatttcaatgcattaactac-- 34851974  T
705 tatataatttcctttttcatatccttaac 733  Q
    ||||||||||||||||||||||| |||||    
34851975 tatataatttcctttttcatatctttaac 34852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 27433678 - 27433512
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||| ||||  |||||||| ||||||||||| ||||||||| | ||||| || |||| |||||||||    
27433678 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 27433579  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
27433578 ttacacaattttaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 27433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 576 - 737
Target Start/End: Original strand, 1391176 - 1391336
Alignment:
576 ttgggtcatgctaaccggtgcctcctggat-actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    ||||||| ||||||||||||  |||||||  ||||||||||||||  |||||||| |||||||| || ||||| ||| ||||||| || |||||||||||    
1391176 ttgggtcctgctaaccggtgt-tcctggaacactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaat 1391274  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
1391275 taattatacaatttcaatgcattaactac--tatataatttcctttttcatatccttaatcagt 1391336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 576 - 738
Target Start/End: Complemental strand, 35044076 - 35043917
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    |||||||||| ||||||||||| || ||  ||||||||||||||  ||||||| |||||||||||| ||||| ||| ||||||| || ||||||||||||    
35044076 ttgggtcatgttaaccggtgcc-ccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaatt 35043978  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||| |||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
35043977 aat-acacaatttcaatgaattaactac--tatataatttcttttttcatatccttaaccagtg 35043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 610 - 739
Target Start/End: Original strand, 7851191 - 7851319
Alignment:
610 gttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||| |||  ||||    
7851191 gttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaattttaatgcattaattac--tata 7851288  T
709 taatttcctttttcatatccttaaccagtgc 739  Q
    |||||| ||||||||||||||||||||||||    
7851289 taattttctttttcatatccttaaccagtgc 7851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 609 - 739
Target Start/End: Original strand, 29451146 - 29451275
Alignment:
609 ggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||||||||  |||||||| |||||||| || ||||||||| ||| ||| || ||||||||| ||||||||||||||||||||||||||||||  |||    
29451146 ggttaagcataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactac--tat 29451243  T
708 ataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||| ||||    
29451244 ataatttcctttttcatatccttaaccggtgc 29451275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 606 - 741
Target Start/End: Original strand, 1840275 - 1840409
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||| |||||||| |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||| ||       
1840275 actggttaaacatatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattacacaattttaatacattaatta--t 1840372  T
705 tatataatttcctttttcatatccttaaccagtgctc 741  Q
    ||||||||||| ||||| |||||||||||||||||||    
1840373 tatataatttctttttttatatccttaaccagtgctc 1840409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 584 - 739
Target Start/End: Original strand, 3026015 - 3026169
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||||  | ||| |||| |||||||||  ||||||| |||||||||| | ||||| ||| ||||||| || ||||||||||||||||| ||    
3026015 tgctaaccggtgccctcgggacactgattaagcataccataaaagagaattattacgataaaagaaaactgtttttgacattattataaattaattatac 3026114  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||  | ||||||||| ||||||||| |||||||||||||    
3026115 aatttcaatgcattaactac--tgtataatttcatttttcatacccttaaccagtgc 3026169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 610 - 737
Target Start/End: Complemental strand, 12525873 - 12525747
Alignment:
610 gttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||| |||||||| ||||||||||| |||| |||| ||| ||| || ||||||||||||||||||||| |||||||| |||||||||  ||||    
12525873 gttaagcatatcataaaagggaattattaccataaaatgaaactgtgtttgacattattataaattaattacacattttcaatgtattaactac--tata 12525776  T
709 taatttcctttttcatatccttaaccagt 737  Q
    ||||||||||||||||| |||||||||||    
12525775 taatttcctttttcatacccttaaccagt 12525747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 579 - 741
Target Start/End: Complemental strand, 5323585 - 5323424
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    ||||||| ||| |||||||||| ||  || ||||| |||||  |||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||    
5323585 ggtcatgttaatcggtgcctccagggcaccggttacgcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaat 5323486  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctc 741  Q
    |||| ||||| ||||| |||| |||  ||||||||||||||||| |||| ||||| ||||||||    
5323485 tacataattttaatgctttaattac--tatataatttccttttttatattcttaatcagtgctc 5323424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 636 - 739
Target Start/End: Complemental strand, 20898075 - 20897974
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
20898075 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 20897978  T
736 gtgc 739  Q
    ||||    
20897977 gtgc 20897974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 628 - 739
Target Start/End: Original strand, 21878398 - 21878507
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| |||| |||| ||||||| || ||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||    
21878398 ggaattattaccataaaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactac--tatataatttcctttttcatatc 21878495  T
728 cttaaccagtgc 739  Q
    ||||||| ||||    
21878496 cttaacccgtgc 21878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 636 - 739
Target Start/End: Original strand, 34477609 - 34477710
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
34477609 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 34477706  T
736 gtgc 739  Q
    ||||    
34477707 gtgc 34477710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 578 - 735
Target Start/End: Original strand, 25165413 - 25165569
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||  || ||  | |||||||||||||  |||||| ||||||||| || ||||| ||| ||||||| || ||||||||||||||    
25165413 gggtcctgctaaccggtgctcccagggcattggttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaa 25165512  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    |||||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||    
25165513 ttacacaatttcaatatattaactac--tatataatttcttttttcatatccttaacca 25165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 605 - 733
Target Start/End: Complemental strand, 9661145 - 9661018
Alignment:
605 tactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    ||||| |||| |||||||||||| ||||||||||||| ||||||||| || ||||||| ||||| ||||||||||| |||||||||||||||||||||      
9661145 tactgattaaacatattataaaatggaattattaccataaaaggaaactgcttttaactttattttaaattaattatacaatttcaatgcattaacta-- 9661048  T
704 atatataatttcctttttcatatccttaac 733  Q
     ||| ||||||| |||||||||||||||||    
9661047 ttatgtaatttcttttttcatatccttaac 9661018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 646 - 734
Target Start/End: Original strand, 34396596 - 34396682
Alignment:
646 ggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
34396596 ggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacc 34396682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 606 - 739
Target Start/End: Original strand, 11115125 - 11115255
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||| ||| | ||||| |  |||||||||||||||||||||||||||||| ||||||||       
11115125 actggttaaacatatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattacacaatttcaatgtattaacta--t 11115220  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |||||||||||||||||    
11115221 tatataatttccttttttatatccttaaccagtgc 11115255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 642 - 745
Target Start/End: Original strand, 23629641 - 23629742
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctc 741  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||| |||||| |    
23629641 aaaaggaaattgtttttgactttattataaagtaattacacaatttcaatacattaactac--tatataattttctttttcatatccttaatcagtgccc 23629738  T
742 cggg 745  Q
    ||||    
23629739 cggg 23629742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 602 - 723
Target Start/End: Complemental strand, 961171 - 961051
Alignment:
602 ggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaact 700  Q
    |||||| |||||||||||  ||||||| ||||||||| || ||||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||    
961171 ggatacgggttaagcataccataaaagagaattattatcataaaaggaaattgtttctgactttattatcaattaattacacaattttaatgcattaact 961072  T
701 acgatatataatttcctttttca 723  Q
    ||  |||||||||||||||||||    
961071 ac--tatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 628 - 734
Target Start/End: Complemental strand, 28225355 - 28225252
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||| |||  ||||||| |||||||||||||||    
28225355 ggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattac--tatataa-ttcctttttcatatc 28225259  T
728 cttaacc 734  Q
    |||||||    
28225258 cttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 607 - 738
Target Start/End: Complemental strand, 29978389 - 29978259
Alignment:
607 ctggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgat 705  Q
    |||||||||||||| |||||||| ||||||||||| ||||  ||| ||||||| || |||||||||||  |||||| ||||||||| |||||| |||  |    
29978389 ctggttaagcatatcataaaagggaattattaccataaaattaaactgtttttgactttattataaatatattacataatttcaatacattaaatac--t 29978292  T
706 atataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||||||||||||||| ||||    
29978291 atataatttcctttttcatatccttaactagtg 29978259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 13529554 - 13529481
Alignment:
664 tattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
13529554 tattataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcacatccttaaccagtgc 13529481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 577 - 724
Target Start/End: Complemental strand, 31280502 - 31280362
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    |||||| ||||||||||||||||| ||  ||| ||||||||||  |||    |||||||||| | |||||||||  |||||| || ||||||||||||||    
31280502 tgggtcctgctaaccggtgcctccgggc-actcgttaagcataccata----gaattattactataaaaggaaaccgtttttgacattattataaattaa 31280408  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcat 724  Q
    ||| ||||||||||||||||||||||  ||||||||||||||||||||    
31280407 ttatacaatttcaatgcattaactac--tatataatttcctttttcat 31280362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 533 - 577
Target Start/End: Original strand, 2516309 - 2516353
Alignment:
533 caagtaaatttattaatattgatgaagtcattataaataaagatt 577  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||    
2516309 caagtaaatttattaatattgataatgtcattatagataaagatt 2516353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 5e-49; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 579 - 745
Target Start/End: Original strand, 30675574 - 30675738
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaatt 678  Q
    |||| |||||||||||| | || ||  ||||||||||||||  ||||||||||||||||||| ||||||||| ||||||| || ||||||||||||||||    
30675574 ggtcctgctaaccggtgtccccggggcactggttaagcataccataaaaggaattattaccataaaaggaaactgtttttgacattattataaattaatt 30675673  T
679 acacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
30675674 acacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 30675738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 578 - 746
Target Start/End: Original strand, 9063052 - 9063219
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||| ||| ||  ||||||||||||||| | |||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||    
9063052 gggtcctgctaaccggtgcttccggggcactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaattaa 9063151  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    || ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
9063152 ttgcacgatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgctccggga 9063219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 578 - 746
Target Start/End: Complemental strand, 4648380 - 4648213
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    |||||||||||||||||||  ||  |||||||||||||||||| |||||||| |||||||||||  ||| |||| ||||||| || ||||||||||||||    
4648380 gggtcatgctaaccggtgctcccaagatactggttaagcatatcataaaagggaattattaccatcaaaagaaactgtttttgacattattataaattaa 4648281  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||||||| |||||| ||||||    
4648280 ttacacaatttcaatgtattaactac--tatataatttcctttttcatatccttaatcagtgccccggga 4648213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 610 - 745
Target Start/End: Original strand, 33357161 - 33357295
Alignment:
610 gttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||  ||||||| |||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||    
33357161 gttaagcataccataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac--tata 33357258  T
709 taatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||||||||||||    
33357259 taatttcctttttcatatccttaaccagtgctccggg 33357295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 576 - 739
Target Start/End: Complemental strand, 34228870 - 34228708
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||    
34228870 ttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatt 34228771  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
34228770 aattacacaatttcaatgcattaattac--tatataatttcctttttcatatccttaaccagtgc 34228708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 168652 - 168487
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  | ||||||||||||  |||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||||    
168652 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaa 168553  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||    
168552 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccgg 168487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 578 - 744
Target Start/End: Original strand, 27988500 - 27988664
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
27988500 gggtcctgctaaccggtgcccccgggc-actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 27988598  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||    
27988599 ttacacaatttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtgccccgg 27988664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 578 - 744
Target Start/End: Original strand, 28045802 - 28045966
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
28045802 gggtcctgctaaccggtgcccccgggc-actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 28045900  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||    
28045901 ttacacaatttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtgccccgg 28045966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 610 - 745
Target Start/End: Original strand, 42035013 - 42035147
Alignment:
610 gttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||  |||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||  ||||    
42035013 gttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactac--tata 42035110  T
709 taatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||||||||||||    
42035111 taatttcctttttcatatccttaaccagtgctccggg 42035147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 577 - 739
Target Start/End: Original strand, 16888543 - 16888704
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||||| || ||  | ||||||||||||  | ||||| |||||||||||| ||||||||| ||||||| || |||||||||||||    
16888543 tgggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaatta 16888642  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
16888643 attacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacctgtgc 16888704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 578 - 747
Target Start/End: Original strand, 29444140 - 29444308
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| || ||| |||||||||| ||| ||||||||| ||||  |||||||| ||||||||||| ||||| ||| ||||||| || ||||||||||||||    
29444140 gggtcctgttaatcggtgcctccgggacactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaa 29444239  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||| |||||||    
29444240 ttacacaatttcaatgcgttaactac--tatataatttcctttttcatatccttaatcagtgccccgggag 29444308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 609 - 738
Target Start/End: Complemental strand, 36730599 - 36730471
Alignment:
609 ggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||    
36730599 ggttaagcatactataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac--tat 36730502  T
708 ataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||||||||||||| ||||    
36730501 ataatttcctttttcatatccttaactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 585 - 739
Target Start/End: Complemental strand, 21596025 - 21595872
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||| ||| |||| ||| ||||||||||||||  |||||||| ||||| ||||| ||||||||| ||||||| || |||||||||||||||||||||    
21596025 gctaaccagtgtctccgggacactggttaagcataccataaaagggaattaataccataaaaggaaactgtttttgacattattataaattaattacaca 21595926  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
21595925 atttcaatgcattaactcc--tatataatttcctttttcatacccttaaccagtgc 21595872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 585 - 738
Target Start/End: Original strand, 2805267 - 2805419
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    |||||||||||||||| ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| || |||| || ||||||||  |||||||||||    
2805267 gctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacaca 2805366  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
2805367 atttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtg 2805419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 578 - 738
Target Start/End: Complemental strand, 11112825 - 11112666
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||| ||||| || ||  || |||||||||||  ||||||| ||||||||| || ||||| ||| ||||||| || ||||||||||||||    
11112825 gggtcctgctaaccagtgcccccagggcacaggttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaa 11112726  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
11112725 ttacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtg 11112666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 578 - 744
Target Start/End: Original strand, 4537744 - 4537909
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||  ||  || |||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
4537744 gggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 4537843  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||| ||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||| ||||    
4537844 ttacataatttcaatgcattaactac--tatataatttcctattttatatccttaaccagtgccccgg 4537909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 568 - 737
Target Start/End: Original strand, 9537813 - 9537982
Alignment:
568 aataaagat-tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaacctta 665  Q
    ||||||||| |||||| |||||||||||| |||| ||| ||||||||||||||  |||||||||| ||||||| | |||| |||| |  |||| |  |||    
9537813 aataaagatatgggtcctgctaaccggtgtctccgggacactggttaagcataccataaaaggaaattattactataaaaagaaactccttttgaattta 9537912  T
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
9537913 ttataaattaattacacaattttaatgcattaactac--tatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 577 - 739
Target Start/End: Complemental strand, 40831464 - 40831303
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||| |||| || ||| | ||| ||||| |||||||| || ||||||||| ||||| ||||||||||| || |||||||||||||    
40831464 tgggtcctgctaaccggtgtctccagggtacagattatgcatactataaaagaaaattattaccataaaagaaaattgtttttgactttattataaatta 40831365  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||| ||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||||    
40831364 attatacaatttcaatgcattaactac--tatataattttctttttcatatctttaaccagtgc 40831303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 13643197 - 13643032
Alignment:
578 gggtcatgctaaccggtgcctcct-ggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||| ||||||||||||| |||| ||  ||||||||||||||  ||||||| |||||||||||| |||||||| || ||||| || |||||||||||||    
13643197 gggtcctgctaaccggtgc-tcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaatta 13643100  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||    
13643099 attacataatttcaatgcattaactac--tatataatttcctttttcgtatccttaaccagtgccccggg 13643032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 13743622 - 13743457
Alignment:
578 gggtcatgctaaccggtgcctcct-ggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||| ||||||||||||| |||| ||  ||||||||||||||  ||||||| |||||||||||| |||||||| || ||||| || |||||||||||||    
13743622 gggtcctgctaaccggtgc-tcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaatta 13743525  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||    
13743524 attacataatttcaatgcattaactac--tatataatttcctttttcgtatccttaaccagtgccccggg 13743457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 624 - 733
Target Start/End: Original strand, 16890527 - 16890634
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
16890527 aaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttca 16890624  T
724 tatccttaac 733  Q
    ||||||||||    
16890625 tatccttaac 16890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 606 - 738
Target Start/End: Original strand, 20831581 - 20831712
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||| |||||||||  ||||||| |||||||||||| ||||||||| || |||| || ||||||||||||||||| || |||||||||||||||||||      
20831581 actgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaattaattatactatttcaatgcattaactac-- 20831678  T
705 tatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||||||||||    
20831679 tatataatttcctttttcatatccttaaccagtg 20831712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 32114095 - 32113929
Alignment:
578 gggtcatgctaaccggtgcctcctggat-actggttaagcatattataaaagg-aattattaccacaaaagg-aaattgtttttaaccttattataaatt 674  Q
    ||||| |||||||||||| ||| ||||  ||||||||| |||| ||||||||| |||||||| || |||||| ||| ||||||| || ||||||||||||    
32114095 gggtcctgctaaccggtggctc-tggagcactggttaaacatactataaaagggaattattatcataaaagggaaactgttttttactttattataaatt 32113997  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||    
32113996 aattaaacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccaatactccgg 32113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 577 - 732
Target Start/End: Original strand, 7304517 - 7304671
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| | |||||||||||| || |   ||||||||||||||  ||||||| ||||||||  || ||||||||| ||||||| || |||||||||||||    
7304517 tgggtcctactaaccggtgcccccggagcactggttaagcataccataaaagagaattattttcataaaaggaaactgtttttgactttattataaatta 7304616  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaa 732  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
7304617 attacacaatttcaatgcattaactac--tatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 575 - 745
Target Start/End: Original strand, 16394058 - 16394227
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||||| |||||||||||||| || ||  | ||||||||||||  ||||||| ||||||||| || ||||||||| ||||||| || ||||||| |||    
16394058 attgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaat 16394157  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||  ||||||||||||||||||   |||||||||| |||||||| ||||||||||||||| |||||    
16394158 taattacattatttcaatgcattaacta--ttatataattttctttttcacatccttaaccagtgccccggg 16394227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 584 - 745
Target Start/End: Original strand, 9253908 - 9254067
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| |  ||| | ||||||||||||  ||||||| |||||||||| | ||||||||| ||||||| || ||||||| | ||||||||||    
9253908 tgctaaccggtgcccctgggacattggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattatca-ttaattacac 9254006  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||| |||||    
9254007 aatttcaatgcattaactac--tataaaatttcatttttcatatccttaaccagtgccccggg 9254067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 581 - 738
Target Start/End: Complemental strand, 37373388 - 37373232
Alignment:
581 tcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaatta 679  Q
    ||||| ||| ||||| |||| ||| || |||||||||||  || ||||| ||||||||||| ||||| ||| ||||||  || ||||||| |||||||||    
37373388 tcatgttaatcggtgtctccgggacacgggttaagcataccatgaaagggaattattaccataaaagaaaactgttttcgactttattatcaattaatta 37373289  T
680 cacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
37373288 cacaatttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtg 37373232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 606 - 734
Target Start/End: Complemental strand, 12204012 - 12203885
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||| ||||||  |||||||| |||||||| || ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
12204012 actggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac-- 12203915  T
705 tatataatttcctttttcatatccttaacc 734  Q
    ||||||||||| ||||||||| ||||||||    
12203914 tatataatttcttttttcatacccttaacc 12203885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 606 - 734
Target Start/End: Complemental strand, 12448440 - 12448313
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||| ||||||  |||||||| |||||||| || ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
12448440 actggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac-- 12448343  T
705 tatataatttcctttttcatatccttaacc 734  Q
    ||||||||||| ||||||||| ||||||||    
12448342 tatataatttcttttttcatacccttaacc 12448313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 575 - 739
Target Start/End: Complemental strand, 43119405 - 43119243
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||||| |||||||||||||| || ||  | ||||||||||||  ||||||| ||||||| |||| ||||| ||| ||||||| || |||||||||||    
43119405 attgggtcctgctaaccggtgcc-ccgggccattggttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaat 43119307  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||| ||||||||||||||||||||||  |||||||||| |||||||||||| |||| ||||||    
43119306 taattatacaatttcaatgcattaactac--tatataattttctttttcatatctttaatcagtgc 43119243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 584 - 739
Target Start/End: Complemental strand, 28626947 - 28626794
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||| ||| ||| |||| |||||||||  |||||||| |||||||| || |||| |||| ||||||| || ||||||||||||||| ||||    
28626947 tgctaaccggtgc-tcccggacactgattaagcataccataaaagggaattattatcataaaaagaaactgtttttgactttattataaattaatcacac 28626849  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| ||||||||||  ||||||||||||||||||| |||||||||| ||||    
28626848 aatttcaatacattaactac--tatataatttcctttttcacatccttaaccggtgc 28626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 606 - 739
Target Start/End: Original strand, 3930261 - 3930393
Alignment:
606 actggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||| ||||||| || ||||||| |||||||||||||| |||||||||||||||||      
3930261 actggttaagcatatcataaaaggaaattattatcaaaaaaggaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactac-- 3930358  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||| ||||||||  ||||| |||||    
3930359 tatataatttcctctttcatattattaactagtgc 3930393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 577 - 746
Target Start/End: Complemental strand, 29235422 - 29235254
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||||||||||||||||   || ||| |||||||||||||  ||||||||||| |||||| || ||||||||  | ||||| |  |||||||||||||    
29235422 tgggtcatgctaaccggtgttcccgggacactggttaagcatcctataaaaggaaattattatcataaaaggaacctatttttgattttattataaatta 29235323  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    ||||||||| || ||||||||||||||  ||||||||||| ||||| |||||||||| || ||||||||||    
29235322 attacacaaatttaatgcattaactac--tatataatttctttttttatatccttaatcaatgctccggga 29235254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 609 - 739
Target Start/End: Complemental strand, 16785241 - 16785112
Alignment:
609 ggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||| ||||  ||||||| |||||||||  | ||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||  | |||    
16785241 ggttaatcataccataaaagagaattattattataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaact--gctat 16785144  T
708 ataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||| |||||||||||||||||||||||    
16785143 ataatttcttttttcatatccttaaccagtgc 16785112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 628 - 735
Target Start/End: Complemental strand, 10870487 - 10870382
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||||||| ||||||| |  |||||||||||||||||||||||||||||| ||||||||   |||||||||| |||||| |||||    
10870487 ggaattattaccataaaaggaaactgtttttgattttattataaattaattacacaatttcaatgtattaacta--ttatataattttcttttttatatc 10870390  T
728 cttaacca 735  Q
     |||||||    
10870389 attaacca 10870382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 663 - 738
Target Start/End: Complemental strand, 9278312 - 9278239
Alignment:
663 ttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||| ||||    
9278312 ttattataaattaattacacaatttcaatgcattaacta--ttatataatttcctttttcatatctttaacgagtg 9278239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 648 - 731
Target Start/End: Complemental strand, 34192890 - 34192809
Alignment:
648 aaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcctta 731  Q
    ||||| ||||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||    
34192890 aaattatttttgactttattataaattaattacacaatttcaatgcattaacta--gtatataatttcctttttcatattctta 34192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 736
Target Start/End: Original strand, 42433597 - 42433700
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcct 729  Q
    ||||||||||| ||||| ||| ||||||| || || ||||||||||||||||||||||||||||||||||||   |||||||||||||||||  ||| ||    
42433597 aattattaccataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaacta--ttatataatttcctttttagtatgct 42433693  T
730 taaccag 736  Q
    |||||||    
42433694 taaccag 42433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 642 - 738
Target Start/End: Complemental strand, 17467724 - 17467630
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||| |||  |  |||||||||||||||||||| ||||| ||||    
17467724 aaaaggaaattgtttttgattttattatcaattaattacacaatttcaatgcattaattac--tgcataatttcctttttcatatcattaactagtg 17467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 576 - 691
Target Start/End: Original strand, 24843278 - 24843393
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| ||||||||||||| ||| | |||||| |||||||||  ||||||| ||||||||  || ||||||||| || |||| || ||||||||||||    
24843278 ttgggtcctgctaaccggtgc-tcccgaatactgattaagcataccataaaagagaattattgtcataaaaggaaactgattttgactttattataaatt 24843376  T
675 aattacacaatttcaat 691  Q
    |||||||||||||||||    
24843377 aattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 10618118 - 10618044
Alignment:
663 ttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||| ||||||||||||||||| | ||||||||||||  |||||||||| ||||||||||||||||||| ||||    
10618118 ttattatcaattaattacacaatttaattgcattaactac--tatataattttctttttcatatccttaacctgtgc 10618044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 686 - 742
Target Start/End: Complemental strand, 12652707 - 12652653
Alignment:
686 ttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctcc 742  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
12652707 ttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgctcc 12652653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 700
Target Start/End: Complemental strand, 39406977 - 39406905
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaact 700  Q
    |||||||||| || ||||||||| ||||||| || ||||||||||||||||||||||||| || |||||||||    
39406977 ggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 628 - 707
Target Start/End: Complemental strand, 22956840 - 22956761
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||| |||||| ||||||||| ||||||| || ||||||||||||||||||| ||||| |||| ||||||||| ||||    
22956840 ggaatttttaccataaaaggaaactgtttttgacattattataaattaattacataattttaatgtattaactaccatat 22956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 700
Target Start/End: Complemental strand, 22451916 - 22451847
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaact 700  Q
    ||||||||||| ||||||||  | ||||| || || |||||||||||||||||||||||||||||||||||    
22451916 aattattaccataaaaggaagctatttttgacttt-ttataaattaattacacaatttcaatgcattaact 22451847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 708
Target Start/End: Original strand, 30933387 - 30933452
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||| ||| |||||    
30933387 aaaagaaaaatgtttttaacttt-ttataaattaattacacaatttcaatgcattaattactatata 30933452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 705 - 739
Target Start/End: Original strand, 36923789 - 36923823
Alignment:
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||| ||||||    
36923789 tatataatttcctttttcatatccttaatcagtgc 36923823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 7e-48; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 13661994 - 13661828
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  || |||||||||||  ||||||| |||||||||||| ||||||||| ||||| | || ||||||| ||||||    
13661994 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaa 13661895  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
13661894 ttacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgctccggg 13661828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 34650833 - 34650993
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
34650833 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 34650932  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
34650933 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgc 34650993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 578 - 738
Target Start/End: Original strand, 35504241 - 35504399
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||| || |||||||||||  |||||||| ||||||| ||| |||||| || ||||||| || ||||||||||||||    
35504241 gggtcctgctaaccggtgccccc-ggacacgggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaa 35504339  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
35504340 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtg 35504399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 577 - 734
Target Start/End: Original strand, 21547393 - 21547549
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||| |||| || |||||||||||||||  ||||| | ||||||||| |  |||| |||| ||||||| || |||||||||||||    
21547393 tgggtcctgctaaccggtgtctccggggtactggttaagcataccataaatgagaattattaacttaaaatgaaactgtttttgactttattataaatta 21547492  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
21547493 attacacaatttcaatgcattaactac--tatataatttccttttttatatccttaacc 21547549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 578 - 738
Target Start/End: Complemental strand, 35132707 - 35132549
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  | ||||||||||||  ||||||| |||||||||||| ||| | ||| ||||||| || ||||||||||||||    
35132707 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaa 35132609  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
35132608 ttacacaatttcaatgtattaactac--tatataatttcctttttcatatccttaaccagtg 35132549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 8787525 - 8787359
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||||||||  |||||| |||||||||| || ||||||||| ||||||| |  ||||||||||||||    
8787525 gggtcctgctaaccggtgcccccggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaa 8787426  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||||| ||| |||||    
8787425 ttacacaatttcaatgcattaactac--tatataatttcatttttcatacccttaaccaatgccccggg 8787359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 578 - 732
Target Start/End: Original strand, 40564404 - 40564557
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||    || || ||||||||||||  ||||||| |||||||||||| ||||  ||||||||||| || ||||||||||||||    
40564404 gggtcctgctaaccggtgcccttggggtattggttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaa 40564503  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaa 732  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||    
40564504 ttacacaatttcaatgcattaactac--tatataatttcctttttcaaatccttaa 40564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 606 - 742
Target Start/End: Complemental strand, 12506454 - 12506319
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||||||   ||||||| |||||||||| | ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
12506454 actggttaagcattccataaaagagaattattactataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac-- 12506357  T
705 tatataatttcctttttcatatccttaaccagtgctcc 742  Q
    |||||||||||||||||||||  |||||| ||||||||    
12506356 tatataatttcctttttcatactcttaacgagtgctcc 12506319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 610 - 738
Target Start/End: Complemental strand, 20175381 - 20175254
Alignment:
610 gttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    |||||||||||||||||||| |||||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||    
20175381 gttaagcatattataaaagggaattattatcataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac--tata 20175284  T
709 taatttcctttttcatatccttaaccagtg 738  Q
    ||||||| ||||| ||||  ||||||||||    
20175283 taatttctttttttatatttttaaccagtg 20175254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 581 - 744
Target Start/End: Complemental strand, 6283745 - 6283583
Alignment:
581 tcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaatta 679  Q
    ||||||||||||||||| |  ||  ||||||||||||||  ||||||  |||||||||||| ||||| ||||||||||| || |||||||||||||||||    
6283745 tcatgctaaccggtgcccctagggcactggttaagcataccataaaaatgaattattaccataaaagaaaattgtttttgactttattataaattaatta 6283646  T
680 cacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||| ||   |||||||||| |||||||||||| ||||| ||||| ||||    
6283645 cacaatttcaatgcattaatta--ttatataattttctttttcatatctttaactagtgccccgg 6283583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 11957967 - 11958133
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| |  ||  |||||||||||||   |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
11957967 gggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 11958066  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||| ||||| |||||| |||| |||||    
11958067 ttacacaatttcattgcattaactac--tatataatttccttttttatatctttaacctgtgccccggg 11958133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 624 - 745
Target Start/End: Original strand, 10054400 - 10054518
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    ||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||    
10054400 aaaaggaattattaccataaaaggaaactgttttga-cattattataaattaattacacaatttcaatgcattaatta--ttatataatttcctttttca 10054496  T
724 tatccttaaccagtgctccggg 745  Q
    || ||||||||||||| |||||    
10054497 tacccttaaccagtgccccggg 10054518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 626 - 739
Target Start/End: Complemental strand, 13470288 - 13470177
Alignment:
626 aaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcata 725  Q
    |||| |||||||||| ||||||||| ||||||| || ||||||||||||||||| |||||||||||||||| |||||  ||||| |||||||||||||||    
13470288 aaggtattattaccataaaaggaaactgtttttgactttattataaattaattatacaatttcaatgcattgactac--tatattatttcctttttcata 13470191  T
726 tccttaaccagtgc 739  Q
    ||||||||||||||    
13470190 tccttaaccagtgc 13470177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 606 - 731
Target Start/End: Complemental strand, 11846230 - 11846106
Alignment:
606 actggttaagcatattataaaaggaatt-attaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||||||| |  |||| || |||||||||||||||||||||||||||||| |||||||||      
11846230 actggttaagcatactataaaagggatttattaccataaaaggaaactacttttgactttattataaattaattacacaatttcaatgtattaactac-- 11846133  T
705 tatataatttcctttttcatatcctta 731  Q
    ||||||||||||||||| |||||||||    
11846132 tatataatttccttttttatatcctta 11846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 578 - 702
Target Start/End: Complemental strand, 10956137 - 10956013
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||| | | | || |||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| || || |||||||||||    
10956137 gggtcttgctaaccggtacattcggggtactggttaagcatatcataaaaggaaattattaccataaaaggaaattgtttttgactttgttataaattaa 10956038  T
677 ttacacaatttcaatgcattaactac 702  Q
    ||| ||||||||||||||||||||||    
10956037 tta-acaatttcaatgcattaactac 10956013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 636 - 744
Target Start/End: Original strand, 19647717 - 19647823
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||| | || ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
19647717 taccataaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 19647814  T
736 gtgctccgg 744  Q
    |||| ||||    
19647815 gtgccccgg 19647823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 628 - 737
Target Start/End: Original strand, 9721658 - 9721765
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    |||||||||| || ||||| ||| ||||||| || ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||     
9721658 ggaattattatcataaaagaaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattac--tatataatttcctttttcatatt 9721755  T
728 cttaaccagt 737  Q
    ||||||||||    
9721756 cttaaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 636 - 745
Target Start/End: Complemental strand, 10070095 - 10069989
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| |||| |||| ||||||| || ||||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
10070095 taccataaaaagaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 10069999  T
736 gtgctccggg 745  Q
    |||| |||||    
10069998 gtgccccggg 10069989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 629 - 738
Target Start/End: Original strand, 39066987 - 39067095
Alignment:
629 gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcc 728  Q
    |||||||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||||||  ||||||||   ||||||||||| ||||||||||||    
39066987 gaattattaccataaaaggatattgtttttgactttattataaattaattacataatttcaatatattaacta-attatataatttcttttttcatatcc 39067085  T
729 ttaaccagtg 738  Q
    ||||||||||    
39067086 ttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 597 - 737
Target Start/End: Complemental strand, 31909793 - 31909659
Alignment:
597 ctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcat 695  Q
    |||| ||||||||||||||||||  ||||||| || |||||| ||     ||||| ||||||| || ||||||||||| |||||||||||||||||||||    
31909793 ctccgggatactggttaagcataccataaaagaaaattattatca-----ggaaactgtttttgactttattataaatcaattacacaatttcaatgcat 31909699  T
696 taactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||||||  |||||||||||| |||| |||||||||||||||    
31909698 taactac--tatataatttcccttttaatatccttaaccagt 31909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 732
Target Start/End: Complemental strand, 40057494 - 40057340
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||||  ||  ||||||||| || || |||||||| || |||||| | ||||| ||| || |||| |  |||||||||||||    
40057494 tgggtcctgctaaccggtgcctcgaggtcactggttaaacacatcataaaagggaaatattactataaaagaaaactgcttttgattttattataaatta 40057395  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaa 732  Q
    |||| || ||||||||||| |||||||  ||||||||||||||||||||||||||||    
40057394 attatactatttcaatgcactaactac--tatataatttcctttttcatatccttaa 40057340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 663 - 745
Target Start/End: Complemental strand, 4837357 - 4837277
Alignment:
663 ttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||| |||| |||||    
4837357 ttattataaattaattacacaatttcaatgcattaattac--tatataatttcctttttcatattcttaaccggtgccccggg 4837277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 578 - 702
Target Start/End: Complemental strand, 4268747 - 4268623
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||||| |||||||||||| |||||| || |||||||||||  | ||||| || ||||||||| ||||||||| ||||||| |  || |||||||||||    
4268747 gggtcatactaaccggtgccccctggacacgggttaagcataccaaaaaagaaaattattaccataaaaggaaactgttttttatttt-ttataaattaa 4268649  T
677 ttacacaatttcaatgcattaactac 702  Q
    ||||||||||| ||||||||||||||    
4268648 ttacacaattttaatgcattaactac 4268623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 615 - 739
Target Start/End: Complemental strand, 39069527 - 39069407
Alignment:
615 gcatattataaaag-gaattattaccacaaaaggaaattgtttttaacc-ttattataaattaattacacaatttcaatgcattaactacgatatataat 712  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||| ||  ||||||||   |||||||||||||| ||||||||||||||  ||||||||    
39069527 gcatatcataaaagagaattattaccataaaaggaaattgtttttcacaattattata---taattacacaattttaatgcattaactac--tatataat 39069433  T
713 ttcctttttcatatccttaaccagtgc 739  Q
    |||| |||||||| |||||||||||||    
39069432 ttcc-ttttcatacccttaaccagtgc 39069407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 655 - 738
Target Start/End: Original strand, 2619635 - 2619716
Alignment:
655 ttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||||||| ||||    
2619635 ttttaactttattataaattaattacacaatttcaatacattaactac--taaataattttctttttcatatccttaacaagtg 2619716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 738
Target Start/End: Original strand, 19436890 - 19436995
Alignment:
629 gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcc 728  Q
    |||||||||||| ||||  ||| | |||||||| |||| |||||||||||| ||||||||||||| ||||| ||  ||||||||||||||||||||||||    
19436890 gaattattaccataaaaa-aaactatttttaactttat-ataaattaattatacaatttcaatgctttaaccac--tatataatttcctttttcatatcc 19436985  T
729 ttaaccagtg 738  Q
    ||||| ||||    
19436986 ttaacgagtg 19436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 738
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||| ||||||||||| |||||| |||  |||||||||||||||||  |||||||||||||||    
6284892 ttataaattaattatacaatttcaatacattaattac--tatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 1e-46; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 578 - 739
Target Start/End: Complemental strand, 15227925 - 15227765
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
15227925 gggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 15227826  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
15227825 ttacacaatttcaatgcattaattac--tatataatttcctttttcatatccttaaccagtgc 15227765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 47010179 - 47010014
Alignment:
578 gggtcatgctaaccggtgcctcctggat-actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||  ||||||| |||||||||||| ||||||||| ||||||| |  |||||||||||||    
47010179 gggtcctgctaaccggtgcc-cctggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaatta 47010081  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
47010080 attacacaatttcaatacattaactac--tatataatttcctttttcatatccttaaccagtgctccgg 47010014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 585 - 739
Target Start/End: Original strand, 3784720 - 3784873
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||||||||| || ||| || |||||||||||  |||||||||| ||||||||| ||||| ||||||||||| || ||||||| |||||||||||||    
3784720 gctaaccggtgcccccgggacacgggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaattaattacaca 3784819  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
3784820 atttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 578 - 733
Target Start/End: Original strand, 19031815 - 19031969
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||| |||| || ||| |||||||||||| |||||||||| ||||||||| ||||||||| ||||||| || ||||||||||||||    
19031815 gggtcctgctaaccggtgtctccggggtacgggttaagcatatcataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaa 19031914  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaac 733  Q
    ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
19031915 ttacacaatttcaatgttttaactac--tatataatttcctttttcatatccttaac 19031969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 29657957 - 29657791
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
29657957 gggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaa 29657858  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||    
29657857 ttatacaatttcaatgcattaactac--tatataatttccttttttatatccttaaccagtgccccggg 29657791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 14350279 - 14350443
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  || || ||||||||||||| ||||||||||||||||| || |||||||||||||||    
14350279 gggtcctgctaaccggtgcc-ccggggcactggttaagcataccattaagggaattattaccataaaaggaaattgtttttgacattattataaattaat 14350377  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||| ||||||||||||||   |||||||||||||||||||| |||||||| ||||||||||    
14350378 tacacaattttaatgcattaactac--aatataatttcctttttcatacccttaaccggtgctccggg 14350443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 579 - 744
Target Start/End: Complemental strand, 38163035 - 38162871
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| |||||||||||||| || ||  || |||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||||||||||    
38163035 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaat 38162936  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||| ||||    
38162935 tacacaatttcaatgcattaactac--tatataattttctttttcatacccttaaccagtgccccgg 38162871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 609 - 745
Target Start/End: Original strand, 30294412 - 30294547
Alignment:
609 ggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||||||||  |||||||| ||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||    
30294412 ggttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac--tat 30294509  T
708 ataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||| |||||||||    
30294510 ataatttcctttttcatatccttaaccaatgctccggg 30294547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 578 - 738
Target Start/End: Original strand, 51065748 - 51065907
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| |  ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
51065748 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 51065847  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||    
51065848 ttacacaatttcaatacattaactac--tatataatttactttttcatatccttaaccagtg 51065907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 5694507 - 5694342
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || |   ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
5694507 gggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 5694408  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||    
5694407 ttacacaatttcaatgcattaactac--tatataatttccctttttatatccttaaccagtgccccgg 5694342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 18043348 - 18043183
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  ||||||  |||||||||||| ||||| ||| ||||||| || ||||||||||||||    
18043348 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaa 18043249  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||| ||||    
18043248 ttacacaatttcaatgcattaactac--tatataatttccttttttatacccttaaccagtgccccgg 18043183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 584 - 745
Target Start/End: Original strand, 12072068 - 12072228
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| || ||  ||||||||||||||  |||||| ||||||||||||| ||||| ||| ||||||| || ||||||| ||||||||||||    
12072068 tgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacac 12072167  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||| |||| |||||    
12072168 aatttcaatgcattaactac--tacataatttcctttttcatatccttaaccggtgccccggg 12072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 576 - 745
Target Start/End: Original strand, 24178461 - 24178629
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    |||||||  ||||||||||||| || ||  ||||||||||||||  |||||| ||| ||||||||| ||||||||| || |||| || |||||||| |||    
24178461 ttgggtccggctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagatt 24178560  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||    
24178561 aattacacaatttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtgccccggg 24178629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 584 - 745
Target Start/End: Original strand, 42769996 - 42770156
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| || ||  ||||||||||||||  ||||||  |||||||||||| ||||||||| ||||||| |  ||||||||||||||||||||    
42769996 tgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacac 42770095  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||| |||||    
42770096 aatttcaatgcattaactac--tatataatttcctttttcataccattaaccagtgccccggg 42770156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 605 - 745
Target Start/End: Complemental strand, 3097818 - 3097679
Alignment:
605 tactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    |||||||||||||||  |||||||||| ||||||||| ||||| ||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||     
3097818 tactggttaagcataccataaaaggaaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactac- 3097720  T
704 atatataatttcctttttcatatccttaaccagtgctccggg 745  Q
     ||||||||||||||||||||||||||||||||  |||||||    
3097719 -tatataatttcctttttcatatccttaaccaggactccggg 3097679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 577 - 739
Target Start/End: Original strand, 9266727 - 9266888
Alignment:
577 tgggtcatgctaaccggtgcctcctggat-actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    |||||| ||||||||||||| || ||||  |||||||||| |||  ||||||| |||||||||||| ||||||||| ||||||| || ||||||| ||||    
9266727 tgggtcctgctaaccggtgcttc-tggagcactggttaagtataccataaaagcgaattattaccataaaaggaaactgtttttgactttattatgaatt 9266825  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
9266826 aattacacaatttcaatgcattaaatac--tatataatttcctttttcatatccttaaccagtgc 9266888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 606 - 745
Target Start/End: Original strand, 35985649 - 35985787
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| ||| |||||| || ||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
35985649 actggttaagtatactataaatgggaattattaccataaaaggaaactgtttttcactttattataaattaattacacaatttcaatgcattaactac-- 35985746  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
35985747 tatataatttccttttttatatccttaaacagtgatccggg 35985787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 602 - 732
Target Start/End: Complemental strand, 6770499 - 6770370
Alignment:
602 ggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaact 700  Q
    ||||||||||||||||||| |||||||| |||||||| || |||| |||| ||||||| || ||||||||||||||||||||||||||||| ||||||||    
6770499 ggatactggttaagcatatcataaaagggaattattatcataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaact 6770400  T
701 acgatatataatttcctttttcatatccttaa 732  Q
    ||  ||||||||||||||||||||||||||||    
6770399 ac--tatataatttcctttttcatatccttaa 6770370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 609 - 737
Target Start/End: Complemental strand, 48071637 - 48071510
Alignment:
609 ggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    ||||||||||| ||||||||  ||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||   |||    
48071637 ggttaagcatactataaaagataattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta--ttat 48071540  T
708 ataatttcctttttcatatccttaaccagt 737  Q
    ||||||||||||| ||||||||||||||||    
48071539 ataatttccttttacatatccttaaccagt 48071510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 17333284 - 17333442
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  | ||||||||  ||  |||||||| || ||||| || ||||||||| ||||||| || ||||||| ||||||    
17333284 gggtcctgctaaccggtgcctccggggcattggttaag--taccataaaagggaagtattatcataaaaggaaactgtttttgactttattatgaattaa 17333381  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
17333382 ttacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgc 17333442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 578 - 747
Target Start/End: Original strand, 38701937 - 38702101
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    ||||| ||||||||||||||  | ||  ||||||||||||||  ||||   |||||||||||| ||||| ||| ||||||| || |||||||||||||||    
38701937 gggtcctgctaaccggtgccctcggggcactggttaagcataccataa---gaattattaccataaaagaaaactgtttttgacattattataaattaat 38702033  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||| ||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||    
38702034 tacataatttcaatgcattaactac--tatatagtttcctttttcatacccttaaccagtgccccgggag 38702101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 606 - 732
Target Start/End: Complemental strand, 45431436 - 45431311
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| |||| ||||||| |||||||||||| ||||||||| | ||||| || ||||||||||||||||||||||||||||| ||||||||||      
45431436 actggttaagtatatcataaaagagaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactac-- 45431339  T
705 tatataatttcctttttcatatccttaa 732  Q
    ||||||||||||||||||||||||||||    
45431338 tatataatttcctttttcatatccttaa 45431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 578 - 732
Target Start/End: Original strand, 50128172 - 50128325
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||  ||  ||| ||||||||||||||  ||||||| |||||||||||| |||| |||| || ||||||| ||||||||||||||    
50128172 gggtcctgctaaccggtgtttctgggacactggttaagcataccataaaagagaattattaccataaaatgaaactgcttttaactttattataaattaa 50128271  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaa 732  Q
    ||||||||||||||||||||||||||  ||| |||||| |||||||||||||||||    
50128272 ttacacaatttcaatgcattaactac--tatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 636 - 744
Target Start/End: Complemental strand, 29210540 - 29210434
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
29210540 taccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaacca 29210443  T
736 gtgctccgg 744  Q
    |||| ||||    
29210442 gtgccccgg 29210434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 606 - 737
Target Start/End: Original strand, 51368813 - 51368943
Alignment:
606 actggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||| ||||||||||| | ||||||||| | ||||| || |||||||||||||| |||||||||||||||||||||||||      
51368813 actggttaagcataccataaaatggaattattactataaaaggaaactatttttgacattattataaattaactacacaatttcaatgcattaactac-- 51368910  T
705 tatataatttcctttttcatatccttaaccagt 737  Q
    ||||||||||||||||||||| |||||||||||    
51368911 tatataatttcctttttcatacccttaaccagt 51368943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 606 - 739
Target Start/End: Original strand, 36446353 - 36446484
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  |||||||| ||||||||| | ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
36446353 actggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac-- 36446450  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |||| ||||||||||||    
36446451 tatataatttccttttt-atattcttaaccagtgc 36446484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 609 - 735
Target Start/End: Original strand, 23473495 - 23473620
Alignment:
609 ggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||| || ||| ||| ||||||||||||||||| ||||||||||| ||||||||  | |||    
23473495 ggttaagcatattataaaaagaaattattaccataaaaggaaactgctttaaactttattataaattaattatacaatttcaatacattaact--gctat 23473592  T
708 ataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||||||||||||||||    
23473593 ataatctcctttttcatatccttaacca 23473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 606 - 738
Target Start/End: Complemental strand, 43286880 - 43286749
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||| | ||||||||| | ||||| || ||||||||||||||||||| ||||||||  |||||||||       
43286880 actggttaagcataccataaaagagaattattactataaaaggaaactatttttgactttattataaattaattacataatttcaaaacattaacta--t 43286783  T
705 tatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||||||||||    
43286782 tatataatttcctttttcatatccttaaccagtg 43286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 577 - 747
Target Start/End: Complemental strand, 30657789 - 30657626
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||| |||||||||| || |||||||||||||||  |||||||| |||||||| || |||       ||||||| || |||||||||||||    
30657789 tgggtcctgctaatcggtgcctccggggtactggttaagcataccataaaagggaattattatcataaac------tgtttttgactttattataaatta 30657696  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||| ||||||||||||||||||||  ||||||||||| |||||||||| |||||| ||||| |||||||    
30657695 attacataatttcaatgcattaactac--tatataatttcttttttcatatgcttaactagtgccccgggag 30657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 577 - 739
Target Start/End: Complemental strand, 41730495 - 41730331
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||| |||| ||  ||  ||| ||||||||||  |||||||| |||||||| || ||||||||| ||||||| || |||||||||||||    
41730495 tgggtcctgctaaccagtgcttctggggcacttgttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaatta 41730396  T
676 attacacaatttcaatgcattaactacga-tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||| |||||||||||||||||| ||| | ||||||||||| |||||||||| ||||||| ||||    
41730395 attaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgc 41730331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 576 - 733
Target Start/End: Original strand, 47532669 - 47532824
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| |||||||||||| || | ||  | ||||||||||||  |||||||| ||||||||  | ||||||||||| ||||| || ||||||| | ||    
47532669 ttgggtcttgctaaccggtgtcttcggggcattggttaagcataccataaaagggaattattattataaaaggaaattatttttgactttattatca-tt 47532767  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaac 733  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
47532768 aattacacaatttcaatgcattaactac--tatataattttctttttcatatccttaac 47532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 606 - 733
Target Start/End: Complemental strand, 12307075 - 12306950
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||||  ||||||| || |||||||||||||||||||||||||||||| |||||||||      
12307075 actggttaagcataccataaaagagaattattaccataaaaggaatctgtttttgactttattataaattaattacacaatttcaatgtattaactac-- 12306978  T
705 tatataatttcctttttcatatccttaac 733  Q
     ||||||||| ||||||| |||| |||||    
12306977 -atataattttctttttcgtatcattaac 12306950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 606 - 745
Target Start/End: Complemental strand, 29683354 - 29683215
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||| | |||| |||| ||||||| || ||||||||||||||||| || |||||||||||||||||||      
29683354 actggttaagcataccataaaagtgaattattactataaaatgaaactgtttttgactttattataaattaattatacgatttcaatgcattaactac-- 29683257  T
705 tatataatttcc-tttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||| ||||| ||||| ||||||||||| |||||    
29683256 tatataatttcctttttttatatctttaaccagtgccccggg 29683215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 738
Target Start/End: Complemental strand, 38335303 - 38335196
Alignment:
629 gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcc 728  Q
    ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||     
38335303 gaattattatcataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattac--tatataatttcctttttcatatct 38335206  T
729 ttaaccagtg 738  Q
    ||||||||||    
38335205 ttaaccagtg 38335196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 606 - 745
Target Start/End: Complemental strand, 13961369 - 13961232
Alignment:
606 actggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| || ||||||||| |||| |||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||      
13961369 actggttaagcataccataaaagaaaattattaccataaaatgaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactac-- 13961272  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||  ||||| |||||||||||| |||| |||||    
13961271 tatataattt-tttttttatatccttaacccgtgccccggg 13961232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 606 - 735
Target Start/End: Original strand, 8472942 - 8473070
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| |||  ||||||| |||||||||  | |||| |||| ||||||| || ||||||||||||||||||||||||| |||||||||||||       
8472942 actggttaagtataccataaaagagaattattattataaaatgaaactgtttttgactttattataaattaattacacaattttaatgcattaacta--t 8473039  T
705 tatataatttcctttttcatatccttaacca 735  Q
    ||||||||||||||||| |||||||||||||    
8473040 tatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 608 - 747
Target Start/End: Original strand, 48383141 - 48383279
Alignment:
608 tggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| |||||||||||  |||||||| ||||||||     |    
48383141 tggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacattatttcaatacattaact--ttca 48383238  T
707 tataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||||| |||||||| ||||||||||||||| |||||||    
48383239 tataattttctttttcacatccttaaccagtgccccgggag 48383279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 624 - 735
Target Start/End: Complemental strand, 52749741 - 52749632
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    ||||||||||||||||| ||||  |||||||||||||| ||||| |||||| | || ||||||||||| |||||||||   |||||||||||||||||||    
52749741 aaaaggaattattaccataaaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaacta--ttatataatttcctttttca 52749644  T
724 tatccttaacca 735  Q
    |||| |||||||    
52749643 tatctttaacca 52749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 606 - 735
Target Start/End: Original strand, 45449272 - 45449400
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  |||||||| ||||||||||| ||||||||| || |||| || ||||||||| |||||||||| |||| ||||||||||||||      
45449272 actggttaaacataccataaaaggcaattattaccataaaaggaaactgcttttgactttattataatttaattacactattttaatgcattaactac-- 45449369  T
705 tatataatttcctttttcatatccttaacca 735  Q
    |||||||||| |||||| ||||| |||||||    
45449370 tatataattttcttttttatatctttaacca 45449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 654 - 737
Target Start/End: Original strand, 15282591 - 15282672
Alignment:
654 tttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    ||||| || |||||||||||||||||||||||||||||  |||||||||  |||||||||| ||||||||||||||||||||||    
15282591 tttttgactttattataaattaattacacaatttcaatatattaactac--tatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 663 - 745
Target Start/End: Complemental strand, 26228293 - 26228213
Alignment:
663 ttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||| || ||||||||||||||| ||||    
26228293 ttattataaattaattacataatttcaatgcattaactac--tatataatttcattttttatctccttaaccagtgcttcggg 26228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 642 - 746
Target Start/End: Complemental strand, 39497428 - 39497326
Alignment:
642 aaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctc 741  Q
    ||||| ||||| ||||| || ||||||||||||||||| | ||||| ||||||||||||||  |||||||||| ||||||||||||||||| || |||||    
39497428 aaaagaaaattatttttgactttattataaattaattatataattttaatgcattaactac--tatataattttctttttcatatccttaatcaatgctc 39497331  T
742 cggga 746  Q
     ||||    
39497330 tggga 39497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 580 - 708
Target Start/End: Complemental strand, 52431765 - 52431636
Alignment:
580 gtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg--aattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||||||||||||||| | |  ||  ||||||||||||||  | |||| |  ||||||||||| ||||| |||||| |||| || || ||||||||||||    
52431765 gtcatgctaaccggtgtccctggggcactggttaagcataccaaaaaaaggaaattattaccataaaagaaaattgcttttgacatt-ttataaattaat 52431667  T
678 tacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||||||||||||||||| |||||    
52431666 tacacaatttcaatgcattaactactatata 52431636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 737
Target Start/End: Original strand, 35700680 - 35700808
Alignment:
606 actggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| |||| | |||||||| |||||| || ||||  ||||| |||||   ||| ||||||||||||||||||||||||||| |||||||||      
35700680 actggttaaggatatcaaaaaaggaagttattatcataaaa--aaatttttttttgactttttataaattaattacacaatttcaatgtattaactac-- 35700775  T
705 tatataatttcctttttcatatccttaaccagt 737  Q
    | |||||||||||||||  ||||||||||||||    
35700776 tgtataatttcctttttagtatccttaaccagt 35700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 578 - 738
Target Start/End: Original strand, 3838777 - 3838936
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg--aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||| |||||||| ||||||  | || ||||| ||||||||| || |||| |  ||||||| ||| ||||  |||||| |||| || || ||||||||||    
3838777 gggttatgctaactggtgccctcggggtactgattaagcatactaaaaaaaggaaattattgccataaaaaaaaattgcttttgacatt-ttataaatta 3838875  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||| |||||||||||||   |||||||||||||||||  ||| |||||||||||    
3838876 attacacaattttaatgcattaacta--ttatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 624 - 721
Target Start/End: Original strand, 37315315 - 37315409
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||| |||||||| || ||||| ||| ||| ||| || || |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
37315315 aaaagaaattattagcataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactac--tatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 575 - 739
Target Start/End: Complemental strand, 39081989 - 39081827
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    ||||| |||||||||||||| || ||  | ||||| |||||||||||| ||||| || |||||| || |||| |||| || ||||||  || ||||||||    
39081989 attggatcatgctaaccggtacccccgaggtactgattaagcatattaaaaaagaaaattattatcataaaatgaaactgcttttaatatt-ttataaat 39081891  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||| | ||||||||| |||||||||   ||||||||||| |||||  ||| ||||||||||||    
39081890 taattataaaatttcaatacattaacta--gtatataatttcatttttagtatgcttaaccagtgc 39081827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 739
Target Start/End: Original strand, 39912368 - 39912439
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||| |||| |||||||||| ||||||    
39912368 ttataaattaatcacacaatttcaatgcattaacta--gtatataatttccctttttatatccttaatcagtgc 39912439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 739
Target Start/End: Complemental strand, 30217901 - 30217786
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcc--ttttt 721  Q
    ||||| ||||||||||| ||||| ||| | ||||| || ||||||||||||||||| | ||||| ||||||||||||||  | | ||||| ||  |||||    
30217901 aaaagaaattattaccataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaactac--tctctaattcccttttttt 30217804  T
722 catatccttaaccagtgc 739  Q
    |||||||||| |||||||    
30217803 catatccttagccagtgc 30217786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 689 - 746
Target Start/End: Original strand, 19011108 - 19011163
Alignment:
689 aatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||||    
19011108 aatgcattaactac--tatataatttcctttttcatatccttaacccgtgccccggga 19011163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 28481940 - 28481873
Alignment:
663 ttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccag 736  Q
    ||||||||||||||||||||||||| |||||||||       | ||||||||||||||||||||||||||||||    
28481940 ttattataaattaattacacaattttaatgcatta------ctgtataatttcctttttcatatccttaaccag 28481873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 37503311 - 37503260
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttccttt 719  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||||||||    
37503311 ttataaattaattacacaatttcaatgtattaactac--tatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 667 - 702
Target Start/End: Original strand, 19011057 - 19011092
Alignment:
667 tataaattaattacacaatttcaatgcattaactac 702  Q
    ||||||||||||||||||||||||||||||||||||    
19011057 tataaattaattacacaatttcaatgcattaactac 19011092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 683 - 739
Target Start/End: Original strand, 10976008 - 10976062
Alignment:
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||| |||||    
10976008 aattttaatgcattaactac--tatataatctcctttttcatatccttaacaagtgc 10976062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 737
Target Start/End: Original strand, 14881092 - 14881124
Alignment:
705 tatataatttcctttttcatatccttaaccagt 737  Q
    |||||||||||||||||||||||||||||||||    
14881092 tatataatttcctttttcatatccttaaccagt 14881124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 14881036 - 14881086
Alignment:
634 attaccacaaaaggaaattgtttttaaccttattataaattaattacacaa 684  Q
    ||||||| ||||||||| ||||||| || ||||||||||||||||| ||||    
14881036 attaccataaaaggaaactgtttttgactttattataaattaattatacaa 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 618
Target Start/End: Original strand, 38595751 - 38595792
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcat 618  Q
    |||||||||||||||||||||||| ||  |||||||||||||    
38595751 tgggtcatgctaaccggtgcctccggggcactggttaagcat 38595792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 52520867 - 52520701
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  ||||||  |||||||||||| ||||||||| ||||||| || ||||||||||||||    
52520867 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 52520768  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
52520767 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 52520701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 577 - 745
Target Start/End: Complemental strand, 272407 - 272240
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||||||| || ||  || | |||||||||  |||||||| ||||||||||| ||||||||| | ||||| || |||||||||||||    
272407 tgggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaatta 272308  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
272307 attacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgccccggg 272240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 577 - 745
Target Start/End: Complemental strand, 46352821 - 46352654
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||||||||||| ||  || |||||||||||  |||||||| ||||||||||| ||||||||| ||||| | || ||||||| |||||    
46352821 tgggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaatta 46352722  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| |||||    
46352721 attacacaatttcaatgcattaactac--tgtataatttcctttttcatatccttaaccagtgccccggg 46352654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 576 - 738
Target Start/End: Original strand, 10617282 - 10617443
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| |||||||||||||| || ||  || |||||||||||  |||||||| ||||||||||| ||||||||||||||||| || ||||||||||||    
10617282 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaatt 10617381  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||    
10617382 aattacacaattttaatgcattaactac--tatataatttccttttttatatccttaatcagtg 10617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 585 - 745
Target Start/End: Complemental strand, 49893510 - 49893351
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||||||||| || ||  |||| |||||||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||| ||||||||||||    
49893510 gctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagattaattacaca 49893411  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||    
49893410 atttcaatgcattaacta--ttatataatttcctttttcatatccttaaccagtgccccggg 49893351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 737
Target Start/End: Complemental strand, 4168369 - 4168211
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || || ||| |||||||||||  ||||||| |||||||||||| ||||| ||| ||||||| || ||||||||||||||    
4168369 gggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaa 4168270  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||    
4168269 ttacacaatttcaatacattaactac--tatataatttccttttttatatccttaaccagt 4168211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 39074604 - 39074439
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| |  ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| |||||| | | ||||||||||||||    
39074604 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttga-cattattataaattaa 39074506  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
39074505 ttacacaatttcaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 39074439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 585 - 739
Target Start/End: Complemental strand, 858768 - 858615
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    ||||||||||||| || ||  || |||||||||||  |||||||||| ||||||||| ||||||||| ||||||| || ||||||| |||||||||||||    
858768 gctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacaca 858669  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
858668 atttcaatgcattaactac--tatataatttcctttttcatatccttaactagtgc 858615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 630 - 745
Target Start/End: Original strand, 41553993 - 41554106
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcct 729  Q
    ||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
41553993 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatcct 41554090  T
730 taaccagtgctccggg 745  Q
    |||||||||| |||||    
41554091 taaccagtgcaccggg 41554106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 578 - 744
Target Start/End: Complemental strand, 43787057 - 43786892
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  ||||||  |||||||||||| ||||||||| ||||||| |  ||||||||||||||    
43787057 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaa 43786958  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||| ||||    
43786957 ttacacaatttcaatgcattaactac--tatataatttcctttttcataccattaaccagtgccccgg 43786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 48725429 - 48725297
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| |||||||||||||||||||||||||||| |||      
48725429 actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattac-- 48725332  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||||||||||    
48725331 tatataatttcctttttcatatccttaaccagtgc 48725297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 578 - 744
Target Start/End: Original strand, 42964249 - 42964414
Alignment:
578 gggtcatgctaaccggtgcctcctg-gatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||| |||||||||||| | |||| || ||||||||||||||| ||||||| |||||||||| | ||||| ||| ||||||| || |||||||||||||    
42964249 gggtcctgctaaccggtgtc-cctgagacactggttaagcatatcataaaagtgaattattactataaaagaaaactgtttttgactttattataaatta 42964347  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||| ||||    
42964348 attacacaatttcaatgcattaactac--tataaaatttcatttttcatatccttaaccagtgccccgg 42964414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 622 - 739
Target Start/End: Complemental strand, 2119571 - 2119457
Alignment:
622 ataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||||||||||||||| | ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
2119571 ataaaaggaattattac-ataaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactac--tatataatttccttttt 2119475  T
722 catatccttaaccagtgc 739  Q
    |||||| |||||||||||    
2119474 catatctttaaccagtgc 2119457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 18014858 - 18014692
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||| |||||| || ||  |||| |||||||||  |||||||||| |||||| || ||||||||| |||||||||| ||||||||  ||||    
18014858 gggtcttgctaactggtgcccccggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtttaa 18014759  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||| |||||    
18014758 ttacacaatttcaatgcattaactac--tatataatttactttttcatatccttaatcagtgccccggg 18014692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 606 - 745
Target Start/End: Original strand, 49529294 - 49529435
Alignment:
606 actggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  |||||||||| ||||||||| ||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||| |    
49529294 actggttaaacataccataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaattacataatttcaatgcattaactacta 49529393  T
705 -tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
     |||||||||| ||||||||||||||||| |||||| |||||    
49529394 gtatataattttctttttcatatccttaatcagtgccccggg 49529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 576 - 738
Target Start/End: Complemental strand, 7468597 - 7468438
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||||| ||||||||||||| ||| ||  |||| |||||||||  |||||||| ||||||| || ||||| ||| || |||| || |||||||||||||    
7468597 ttgggtcctgctaaccggtgc-tccggggcactgattaagcataccataaaagggattattatcataaaagaaaactgcttttgactttattataaatta 7468499  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||    
7468498 attatacaatttcaatgcattaactac--tatataatttcctttttcatttccttaaccagtg 7468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 578 - 743
Target Start/End: Original strand, 43269739 - 43269903
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||||| ||  ||||||||||||||  ||||| |  ||||||||| | ||||||||| ||| ||| |  ||||||||||||||    
43269739 gggtcctgctaaccggtgcctccggggcactggttaagcataccataaaggataattattactataaaaggaaactgtgtttgattttattataaattaa 43269838  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccg 743  Q
    ||||| ||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||    
43269839 ttacataatttcaatgcattaactac--tatgtaatttcccttttcatatccttaaccagtgctccg 43269903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 608 - 745
Target Start/End: Original strand, 53489854 - 53489990
Alignment:
608 tggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||||||||  ||||||  ||||||||| || ||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||  ||    
53489854 tggttaagcataccataaaatagaattattatcataaaaggaaactgtttttgacattattataaattaattacacaattttaatgcattaactac--ta 53489951  T
707 tataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||| ||||||||||||| |||||    
53489952 tataatttcctttttcatacccttaaccagtgccccggg 53489990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 578 - 737
Target Start/End: Original strand, 2938040 - 2938198
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||  | || |||| ||||||||||  ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||    
2938040 gggtcctgctaaccggtgccctcggggtactcgttaagcataccataaaagtgaattattaccataaaatgaaattgtttttgactttattataaattaa 2938139  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    | ||||||||||| ||||||||||||  |||||||||| |||||| ||||| |||||||||    
2938140 tcacacaatttcagtgcattaactac--tatataattttcttttttatatctttaaccagt 2938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 584 - 739
Target Start/End: Complemental strand, 22249066 - 22248912
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||| ||  || || |||| ||||||| ||||||||| ||||||||||| ||||| ||| ||||||| || ||||||| ||||||||||||    
22249066 tgctaaccggtgcttctagggtattggtcaagcatactataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacac 22248967  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| || |||||||  ||||||||||||||||||||||||||||| |||||    
22248966 aatttcaatacaataactac--tatataatttcctttttcatatccttaactagtgc 22248912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 606 - 744
Target Start/End: Complemental strand, 20924150 - 20924013
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    |||||||||| |||  ||||||| |||||||||||  ||||||||| ||||||| |  |||||||||||||||||||||||||||||| |||||||||      
20924150 actggttaagtataccataaaagagaattattaccttaaaaggaaactgtttttgatattattataaattaattacacaatttcaatgaattaactac-- 20924053  T
705 tatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
20924052 tatataatttcctttttcatacccttaaccagtgccccgg 20924013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 606 - 744
Target Start/End: Original strand, 40362608 - 40362745
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||||| ||||| ||| ||||||| || ||||||| ||||||||||||||||| ||||||||||||||      
40362608 actggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatgcattaactac-- 40362705  T
705 tatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||| |||||||||||||||| |||||| ||||    
40362706 tatataatttcttttttcatatccttaatcagtgccccgg 40362745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 584 - 744
Target Start/End: Complemental strand, 41304183 - 41304026
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||| |||| ||  | ||||||||||||  |||||||||| ||||||||| ||||||||| ||||||| || ||||||| |||||||||||     
41304183 tgctaaccggtgtctccggggcattggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattaca- 41304085  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
     ||||||||||||||| |||  ||||||||||||||||||||||||||||||| ||| ||||    
41304084 -atttcaatgcattaattac--tatataatttcctttttcatatccttaaccactgccccgg 41304026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 42548253 - 42548121
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| ||||||||||| |||| |||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||      
42548253 actggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattacataatttcaatgcattaactac-- 42548156  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||| ||||||||||| |||| ||||||    
42548155 tatataatttcttttttcatatctttaagcagtgc 42548121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 606 - 735
Target Start/End: Complemental strand, 2505507 - 2505379
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  |||||||| ||||||||||| ||||||||| | ||||| || ||||||| |||||||||||||||||||||||| |||||||      
2505507 actggttaaacataccataaaagggaattattaccataaaaggaaactatttttgactttattatgaattaattacacaatttcaatgcactaactac-- 2505410  T
705 tatataatttcctttttcatatccttaacca 735  Q
    ||||||||||||||||||||||| |||||||    
2505409 tatataatttcctttttcatatctttaacca 2505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 584 - 733
Target Start/End: Complemental strand, 13160076 - 13159929
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||| || ||||||||| |||||||||  |||||| ||| ||||||||  || || ||| ||||||| || ||||||| ||||||||||||    
13160076 tgctaaccggtgc-tcgtggatactgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacac 13159978  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaac 733  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||||    
13159977 aatttcaatgtattaactac--tatataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 579 - 708
Target Start/End: Complemental strand, 33141070 - 33140940
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| ||||||||||||| ||| || ||||| |||||||||| |||||||| ||||||||||| ||||| ||| || |||| || |||||||||||||||    
33141070 ggtcttgctaaccggtgcttccggggtactgattaagcatatcataaaagggaattattaccataaaagaaaactgcttttgactttattataaattaat 33140971  T
678 tacacaatttcaatgcattaactacgatata 708  Q
    || |||||||||||||||||||||| |||||    
33140970 tatacaatttcaatgcattaactactatata 33140940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 587 - 739
Target Start/End: Original strand, 50359195 - 50359346
Alignment:
587 taaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaat 685  Q
    |||||||||| ||| ||| ||||||||||||||  ||| |||  ||||||||||||||||| ||| ||||||| || |||||||| ||||||||| ||||    
50359195 taaccggtgcttccgggacactggttaagcataccatagaagataattattaccacaaaagaaaactgtttttgactttattatatattaattacccaat 50359294  T
686 ttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||  ||||||||||  |||||| || |||||||||||||    
50359295 ttcaatgcattaactac--tatataattttttttttcttaaccttaaccagtgc 50359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 578 - 738
Target Start/End: Original strand, 50395563 - 50395721
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||| ||||| |||| |  ||||| |||| ||||| ||||||| |||||||||||| |||||||||||||||| | | ||||||| ||||||    
50395563 gggtcctgctaatcggtgtctccggtgtactgattaatcatatcataaaagagaattattaccataaaaggaaattgttttga-ctttattatcaattaa 50395661  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||| |||||||||||||  | |||||||| ||||||||||||| |||||||||    
50395662 ttacacaatttctatgcattaactac--tgtataattttctttttcatatccctaaccagtg 50395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 577 - 701
Target Start/End: Complemental strand, 6842806 - 6842681
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||| |||| || ||  ||||||||||||||  ||||| || ||||||||||| ||||||||| ||||||| || |||||||||||||    
6842806 tgggtcctgctaaccgctgcccccggggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 6842707  T
676 attacacaatttcaatgcattaacta 701  Q
    ||||||||||||||||||||||||||    
6842706 attacacaatttcaatgcattaacta 6842681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 611 - 733
Target Start/End: Complemental strand, 29241790 - 29241669
Alignment:
611 ttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatat 709  Q
    ||||||||| ||||||| |||||||||| || |||| |||  ||||||| || ||||||||||||||||||| ||||||||||||||||||||  |||||    
29241790 ttaagcatactataaaacggaattattatcataaaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactac--tatat 29241693  T
710 aatttcctttttcatatccttaac 733  Q
    ||||||| ||||||||||||||||    
29241692 aatttccattttcatatccttaac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 584 - 742
Target Start/End: Original strand, 41993626 - 41993782
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||||   || |||| ||||||||||  ||||||| |||||||||  | ||||||||| |||||||||| |||||||||||||||||||     
41993626 tgctaaccggtgcctttagggtactagttaagcataccataaaagagaattattat-ataaaaggaaactgtttttaactttattataaattaattacat 41993724  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctcc 742  Q
    ||||||||||||||||||||  ||||||||||| ||||| |||| |||||| | ||||||    
41993725 aatttcaatgcattaactac--tatataatttcatttttaatatacttaacgaatgctcc 41993782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 608 - 738
Target Start/End: Original strand, 11308241 - 11308369
Alignment:
608 tggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    ||||||||||||  ||||||||||||||||||| ||||||||| | ||||| |  ||||||| |||||||||||  ||||||||||||||||||   |||    
11308241 tggttaagcataccataaaaggaattattaccataaaaggaaactatttttgattttattatcaattaattacattatttcaatgcattaacta--ttat 11308338  T
708 ataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||| |||||||| |||||    
11308339 ataatttcctttttcacatccttaatcagtg 11308369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 628 - 738
Target Start/End: Complemental strand, 28139444 - 28139336
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||||||  || |||| || ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||    
28139444 ggaattattaccataaaaggaatctgcttttgactttattataaattaattatacaatttcaatgcattaactac--tatttaatttcttttttcatatc 28139347  T
728 cttaaccagtg 738  Q
    |||||||||||    
28139346 cttaaccagtg 28139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 648 - 744
Target Start/End: Complemental strand, 52246697 - 52246603
Alignment:
648 aaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||| ||||    
52246697 aaattgtttttgactttattataaattaattatacaatttcaatgcattaacaac--tatataatttcatttttcatatccttaaccagtgccccgg 52246603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 609 - 733
Target Start/End: Complemental strand, 38852372 - 38852246
Alignment:
609 ggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga-ta 706  Q
    |||||| ||||  ||||||| ||||||||| || ||||  ||| ||||||| || |||||||||||||||||||||||||||||||||||| ||| | ||    
38852372 ggttaaacataccataaaagtgaattattatcataaaataaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactacta 38852273  T
707 tataatttcctttttcatatccttaac 733  Q
    ||||||||| ||||| |||||||||||    
38852272 tataatttcattttttatatccttaac 38852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 614 - 739
Target Start/End: Complemental strand, 24488516 - 24488392
Alignment:
614 agcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataat 712  Q
    ||||||| ||||||| |||||||||||| |||| |||| ||||||| |  ||||||| |||||||||||| ||||| ||||||||||||   ||||||||    
24488516 agcatatcataaaagagaattattaccataaaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaacta--ttatataat 24488419  T
713 ttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| | || ||||||||||||    
24488418 ttccttttttacattcttaaccagtgc 24488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 605 - 737
Target Start/End: Original strand, 50298972 - 50299103
Alignment:
605 tactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacg 703  Q
    ||||||||||| |||  |||| || ||||||||| || |||| |||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||     
50298972 tactggttaagtataccataagagtgaattattatcataaaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactac- 50299070  T
704 atatataatttcctttttcatatccttaaccagt 737  Q
     |||||||||| | |||| ||||| |||| ||||    
50299071 -tatataattttcctttttatatctttaatcagt 50299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 600 - 727
Target Start/End: Complemental strand, 31514954 - 31514829
Alignment:
600 ctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaa 698  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| | ||||  ||||||||||| |  ||||||||||||||||||||||||| ||| ||||||    
31514954 ctgggtactggttaagtatactataaaaggaaattattactataaaaa-aaattgtttttgattttattataaattaattacacaattttaatacattaa 31514856  T
699 ctacgatatataatttcctttttcatatc 727  Q
    ||||  ||||||||||  |||||||||||    
31514855 ctac--tatataattttatttttcatatc 31514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 739
Target Start/End: Complemental strand, 2391688 - 2391633
Alignment:
682 caatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
2391688 caatttcaatgcattaactac--tatataatttcctttttcttatccttaaccagtgc 2391633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 739
Target Start/End: Complemental strand, 2393449 - 2393394
Alignment:
682 caatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
2393449 caatttcaatgcattaactac--tatataatttcctttttcttatccttaaccagtgc 2393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 678 - 747
Target Start/End: Complemental strand, 52718252 - 52718186
Alignment:
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||||||| |||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
52718252 tacacaattttaatgtattaactac--tatataatttcctttttcatatccttaaccagtg-tccgggag 52718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 721
Target Start/End: Complemental strand, 21010181 - 21010041
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||||||||||||||||   |  ||||| | |||||| |||||| |||||||| ||||||||| |||| |||| | |||| |  ||| |||||||||    
21010181 ttgggtcatgctaaccggtgttccagggatatttgttaaggatattaaaaaaggaagttattaccataaaaagaaacttttttga--ctttttataaatt 21010084  T
675 aattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||| ||||||||||||  ||||||||  |||||||||||||||||    
21010083 aattatacaatttcaatg--ttaactac--tatataatttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 702
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
664 tattataaattaattacacaatttcaatgcattaactac 702  Q
    |||||||||||||||||||||||||||||||||||||||    
6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 688
Target Start/End: Complemental strand, 52552659 - 52552549
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||||||||||||| || | || ||| |||||||||  |||  ||||||| |||||||||||| ||||| | | ||||||| || |||||||||||||    
52552659 tgggtcatgctaaccgatgtcccc-ggacactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaatta 52552562  T
676 attacacaatttc 688  Q
    |||||||||||||    
52552561 attacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 2362862 - 2362819
Alignment:
704 atatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
2362862 atatataatttcctttttcatatccttaaccattgcaccgggag 2362819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 717
Target Start/End: Complemental strand, 2362958 - 2362880
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcct 717  Q
    ||||| ||||| ||| ||||||| |  ||||||| |||||||||||| |||||||||||||||||   ||||||||||||||    
2362958 taccataaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaact---atatataatttcct 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 531 - 577
Target Start/End: Original strand, 20402466 - 20402512
Alignment:
531 tgcaagtaaatttattaatattgatgaagtcattataaataaagatt 577  Q
    ||||| ||||||||||||||||| ||| ||||||||| |||||||||    
20402466 tgcaattaaatttattaatattggtgaggtcattatacataaagatt 20402512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 701
Target Start/End: Complemental strand, 6842674 - 6842641
Alignment:
668 ataaattaattacacaatttcaatgcattaacta 701  Q
    ||||||||||||||||||||||||| ||||||||    
6842674 ataaattaattacacaatttcaatgaattaacta 6842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 7e-45; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 575 - 745
Target Start/End: Complemental strand, 30486399 - 30486230
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||  |    
30486399 attgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtt 30486300  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
30486299 taattacacaatttcaatacattaactac--tatataatttcctttttcatatccttaaccagtgccccggg 30486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 584 - 745
Target Start/End: Original strand, 561524 - 561684
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||||||| || ||||| |||||||||  ||||||| |||||||||  | ||||||||| || |||| || ||||||||||||||||||||    
561524 tgctaaccggtgcctccggggtactgattaagcataccataaaagagaattattattataaaaggaaactgattttgactttattataaattaattacac 561623  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
561624 aatttcaatgcattaactac--tatataatttcctttttcatatccttaaccagtgccccggg 561684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 578 - 739
Target Start/End: Complemental strand, 20553117 - 20552957
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
20553117 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 20553018  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
20553017 ttacacaatttcaatgcattaattac--tatataatttcctttttcatatccttaaccagtgc 20552957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 578 - 747
Target Start/End: Complemental strand, 31438832 - 31438664
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||| | || ||  ||||||||||||||  |||||||| |||||||| || ||||||||| ||||||| || ||||||||||||||    
31438832 gggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaa 31438733  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgggag 747  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| |||||||    
31438732 ttacacaatttcaatgcattaactac--tgtataatttcctttttcatatccttaaccagtgccccgggag 31438664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 606 - 745
Target Start/End: Complemental strand, 4381953 - 4381815
Alignment:
606 actggttaagcatattataaaa-ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
4381953 actggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac-- 4381856  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
4381855 tatataatttcctttttcatacccttaaccagtgcaccggg 4381815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 577 - 744
Target Start/End: Complemental strand, 22887937 - 22887771
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||||||||||| ||||||| || |   ||||||||||||||  ||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||    
22887937 tgggtcatgctaatcggtgcccccggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaatta 22887838  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||| ||||    
22887837 attacataatttcaatgcattaactac--tatataatttcttttttcatatccttaaccactgccccgg 22887771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 578 - 738
Target Start/End: Original strand, 3668113 - 3668272
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||||||  | ||  ||||||||| |||| ||||||||||| ||||||||| ||||||||| ||||||| || ||||||||||||||    
3668113 gggtcttgctaaccggtgccctcggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 3668212  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||    
3668213 ttacacaatttcaatgcattaactac--tatataatttccttttccatacccttaaccagtg 3668272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 606 - 733
Target Start/End: Original strand, 26387092 - 26387218
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||      
26387092 actggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac-- 26387189  T
705 tatataatttcctttttcatatccttaac 733  Q
    |||||||||||||||||||||||||||||    
26387190 tatataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 27856396 - 27856562
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||| |||| || ||  ||||||||||||||  |||||||||| ||||||||| ||||||||| ||||||| || ||||||||||||||    
27856396 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 27856495  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||  |||||||||||| |||||    
27856496 ttacacaatttcaatgcattaacta--ttatataatttcctttttcatactcttaaccagtgccccggg 27856562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 578 - 738
Target Start/End: Complemental strand, 22567788 - 22567629
Alignment:
578 gggtcatgctaaccggtgcctcctggat-actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    ||||| |||||||||||||| ||||||  || |||||||||||  ||||||| |||||||||||| ||||||||||| ||||| || |||||||||||||    
22567788 gggtcctgctaaccggtgcc-cctggagcacgggttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaatta 22567690  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    |||||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||    
22567689 attacacaatttcaatacattaactac--tatataatttcttttttcatatccttaaccagtg 22567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 579 - 746
Target Start/End: Complemental strand, 2898256 - 2898090
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| ||||||||||||||||| ||| |||| |||| ||||  ||||||| |||||||||  | | ||| ||| ||||||| || |||||||||||||||    
2898256 ggtcctgctaaccggtgcctccgggacactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttattataaattaat 2898157  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggga 746  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||    
2898156 tacacaatttcaatgcattaactac--tatataattttctttttcatatccttaaccagtgttccggga 2898090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 578 - 745
Target Start/End: Complemental strand, 44588088 - 44587922
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| ||||||||||| || || ||  ||| ||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||    
44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaa 44587989  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||| |||| |||||    
44587988 ttacacaatttcaatgtattaactac--tatataatttccttttttatatccttaaccggtgccccggg 44587922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 6580347 - 6580215
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||      
6580347 actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaactac-- 6580250  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||| |||||||||||||| |||||||||||||    
6580249 tatatagtttcctttttcatacccttaaccagtgc 6580215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 609 - 738
Target Start/End: Complemental strand, 43637319 - 43637191
Alignment:
609 ggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||| |||| | ||||||||| ||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||    
43637319 ggttaaacatactgtaaaaggaaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac--tat 43637222  T
708 ataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||| |||||||||||||||||||    
43637221 ataatttccttattcatatccttaaccagtg 43637191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 584 - 739
Target Start/End: Original strand, 8969413 - 8969567
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    |||||||||||||| |  ||  ||| |||||||||| ||||||||||| ||||||||| ||||||||| || |||| || ||||||||||||||||||||    
8969413 tgctaaccggtgccccaggggcactagttaagcatactataaaaggaaattattaccataaaaggaaactgcttttgactttattataaattaattacac 8969512  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
     |||||||||||||||||||  |||||||||| |||||||||||||||||| |||||    
8969513 tatttcaatgcattaactac--tatataattttctttttcatatccttaactagtgc 8969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 22068320 - 22068485
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||| ||||||| || ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||    
22068320 gggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 22068419  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||| |||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||| |||||    
22068420 ttatacaatttcaatgca-taactac--tatataattccctttttcatatccttaaccagtgccccggg 22068485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 609 - 744
Target Start/End: Complemental strand, 31390167 - 31390033
Alignment:
609 ggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||||||||| ||||||||| ||||||||||  |||    
31390167 ggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatacattaactac--tat 31390070  T
708 ataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||||||||||||||||||| ||||| ||||    
31390069 ataatttcctttttcatatccttaactagtgccccgg 31390033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 606 - 733
Target Start/End: Original strand, 34442560 - 34442686
Alignment:
606 actggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  |||||||| ||||||||||| ||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||      
34442560 actggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac-- 34442657  T
705 tatataatttcctttttcatatccttaac 733  Q
    |||||||| | ||||||||||||||||||    
34442658 tatataatcttctttttcatatccttaac 34442686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 575 - 745
Target Start/End: Original strand, 32360866 - 32361035
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||||| |||||||||||||| || ||  | ||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || ||||||| |||    
32360866 attgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 32360965  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||| |  ||||||||||||||||||   |||||||||| |||||||| ||||||||||||||| |||||    
32360966 taattatattatttcaatgcattaacta--ttatataattttctttttcacatccttaaccagtgccccggg 32361035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 622 - 743
Target Start/End: Original strand, 5093583 - 5093703
Alignment:
622 ataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttt 720  Q
    |||||||||| |||||| || |||||||||||| |||| || ||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||    
5093583 ataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaattacacaattttaatgcattaactac--tatttaatttcctttt 5093680  T
721 tcatatccttaaccagtgctccg 743  Q
    ||||||||||||| |||||||||    
5093681 tcatatccttaactagtgctccg 5093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 32860259 - 32860128
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||| | ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||      
32860259 actggttaagcataccataaaagagaattattac-ataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatac-- 32860163  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |||||||||||| ||||    
32860162 tatataatttccttttttatatccttaacccgtgc 32860128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 628 - 743
Target Start/End: Original strand, 11021273 - 11021386
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||||||||| ||| ||||||| || |||||||| |||||||||||||||||||||||||||||||   |||||||||| |||||||||||    
11021273 ggaattattaccacaaaagaaaactgtttttgactttattatatattaattacacaatttcaatgcattaactac--catataatttcttttttcatatc 11021370  T
728 cttaaccagtgctccg 743  Q
     |||| ||||||||||    
11021371 tttaatcagtgctccg 11021386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 606 - 735
Target Start/End: Complemental strand, 1859320 - 1859192
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||||| ||||| ||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||      
1859320 actggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactac-- 1859223  T
705 tatataatttcctttttcatatccttaacca 735  Q
    |||| |||||| ||||| |||||||||||||    
1859222 tatacaatttctttttttatatccttaacca 1859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 28601124 - 28600993
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||||| |||| |||| |||||||||| ||||||| ||||||||| |||||||||||||| |||||||      
28601124 actggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaattatacaatttcaatgca-taactac-- 28601028  T
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    | ||||||| |||||||||||||||||||||||||    
28601027 tttataattccctttttcatatccttaaccagtgc 28600993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 586 - 739
Target Start/End: Original strand, 38590883 - 38591034
Alignment:
586 ctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaa 684  Q
    ||||||||||||||  || || ||||||||||||  |||||||| ||||||||||| ||||| ||| ||||||| || ||||||| ||||||||||||||    
38590883 ctaaccggtgcctcgggg-tattggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaa 38590981  T
685 tttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||| ||| ||||||||||  | |||||||||||||||||||| ||||||||||||    
38590982 ttttaatacattaactac--tgtataatttcctttttcatattcttaaccagtgc 38591034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 585 - 738
Target Start/End: Original strand, 25782840 - 25782989
Alignment:
585 gctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacaca 683  Q
    |||||||| || | || ||| ||||||||||||||  |||||||| |||||||| || ||||| ||||||||||| || |||||||||| ||||||||||    
25782840 gctaaccgatgtccccgggacactggttaagcataccataaaagggaattattatcataaaagaaaattgtttttgactttattataaaataattacaca 25782939  T
684 atttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||||||||     |||||||||||||||||||||| |||||| ||||    
25782940 atttcaatgcattaac-----tatataatttcctttttcatattcttaactagtg 25782989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 579 - 737
Target Start/End: Original strand, 4022480 - 4022636
Alignment:
579 ggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaat 677  Q
    |||| |||||||||||||| || ||| ||||||||| ||||| |||||||||| |||||| || ||||||||| ||||| | || |||||||||||||||    
4022480 ggtcctgctaaccggtgcccccgggacactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaat 4022579  T
678 tacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagt 737  Q
    |||| ||||||||| |||||||||| ||   ||||||| |||||||||| ||||| ||||    
4022580 tacagaatttcaatacattaactactat---taatttcttttttcatattcttaatcagt 4022636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 636 - 738
Target Start/End: Original strand, 26891722 - 26891822
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||    
26891722 taccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaacta--atatataatttccttttttatatccttaatca 26891819  T
736 gtg 738  Q
    |||    
26891820 gtg 26891822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 609 - 737
Target Start/End: Original strand, 13574060 - 13574187
Alignment:
609 ggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatat 707  Q
    |||||||||||  |||||||||| ||||||||| |||| |||| ||||||| || ||||||||||||||||||||||||||||| |||||| |    |||    
13574060 ggttaagcataccataaaaggaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaatt--tttat 13574157  T
708 ataatttcctttttcatatccttaaccagt 737  Q
    ||| ||||||||||||||||||||||||||    
13574158 atattttcctttttcatatccttaaccagt 13574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 734
Target Start/End: Complemental strand, 27584872 - 27584769
Alignment:
629 gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcc 728  Q
    |||||||||||| ||||||||| || |||| |  ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||||    
27584872 gaattattaccataaaaggaaactgcttttgattttattataaattaattacacaatttcaatgctttaactac--tatataatttcccttttcatatcc 27584775  T
729 ttaacc 734  Q
    ||||||    
27584774 ttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 630 - 739
Target Start/End: Complemental strand, 38296310 - 38296203
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatcct 729  Q
    ||||||||||| |||| |||| ||||||| || |||||||||||||||||||||||||||||| ||||| |||  |||||||||| |||||||||||| |    
38296310 aattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattac--tatataattttctttttcatatctt 38296213  T
730 taaccagtgc 739  Q
    ||||||||||    
38296212 taaccagtgc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 608 - 739
Target Start/End: Original strand, 35851781 - 35851911
Alignment:
608 tggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||||||||  ||||||| |||||||||||| |||| |||| ||||||| || ||||||| |||||||||||  ||||||||||||||||||   ||    
35851781 tggttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaattaattacattatttcaatgcattaacta--tta 35851878  T
707 tataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||| |||||||||| ||||    
35851879 tataatttcctttttcacatccttaaccggtgc 35851911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 577 - 721
Target Start/End: Complemental strand, 39532009 - 39531868
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    |||||||||||||||||||||||   || |||||||||||||||   ||||| || |||||||| ||||| ||| || |||| ||  | |||||||||||    
39532009 tgggtcatgctaaccggtgcctctgagacactggttaagcatatcgaaaaagaaaatattaccataaaagaaaactggttttgactct-ttataaattaa 39531911  T
677 ttacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
39531910 ttacacaatttcaatgcattaactac--tatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 630 - 746
Target Start/End: Complemental strand, 5881354 - 5881236
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcat----taactacgatatataatttcctttttcata 725  Q
    |||||||| || ||||||||| | ||||| || ||||||| |||||||||||||||||||||||||    |||||||  |||||||||||||||||||||    
5881354 aattattatcataaaaggaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactac--tatataatttcctttttcata 5881257  T
726 tccttaaccagtgctccggga 746  Q
    ||||||||| |||||||||||    
5881256 tccttaacctgtgctccggga 5881236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 630 - 721
Target Start/End: Original strand, 15079012 - 15079100
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttccttttt 721  Q
    |||||||| || ||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
15079012 aattattatcataaaaggaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactac--tatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 603 - 738
Target Start/End: Complemental strand, 25772272 - 25772137
Alignment:
603 gatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaacta 701  Q
    ||||||| ||||| |||  |||||||| |||||||| || ||| ||||||| ||||| || ||||||||||||||||||||||||||| |||||||| ||    
25772272 gatactgattaagtataccataaaagggaattattatcataaagggaaattatttttgactttattataaattaattacacaatttcattgcattaatta 25772173  T
702 cgatatataatttcctttttcatatccttaaccagtg 738  Q
       | |||||||||||||||||||| |||||| ||||    
25772172 -tttttataatttcctttttcatattcttaactagtg 25772137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 608 - 735
Target Start/End: Original strand, 29102313 - 29102439
Alignment:
608 tggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgata 706  Q
    ||||||| ||||| |||||||  ||||||||| | ||||| ||| ||||||| || ||||||||||||||||| | |||||||||| ||||||  || ||    
29102313 tggttaaacatatcataaaagataattattactataaaagaaaactgtttttgactttattataaattaattataaaatttcaatgtattaac--cgcta 29102410  T
707 tataatttcctttttcatatccttaacca 735  Q
    |||||||| |||||| |||| ||||||||    
29102411 tataattttctttttgatattcttaacca 29102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 610 - 721
Target Start/End: Original strand, 34123057 - 34123166
Alignment:
610 gttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatata 708  Q
    ||||||||||||| ||||| || |||| |||| ||||||||| ||||||| || || ||||||||||||||||||| ||||| ||||||||||   ||||    
34123057 gttaagcatattaaaaaagaaaattatgaccataaaaggaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaacta--ttata 34123153  T
709 taatttccttttt 721  Q
    ||||||| |||||    
34123154 taatttctttttt 34123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 599 - 701
Target Start/End: Complemental strand, 15146796 - 15146694
Alignment:
599 cctggatactggttaagcatattataaaaggaa--ttattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcatt 696  Q
    |||||||||||||||| ||||  | ||||||||  |||||| || ||||||||||| ||||| || || |||||||||||||| |||||||||||| |||    
15146796 cctggatactggttaaacatacca-aaaaggaaaattattatcataaaaggaaattatttttgacttt-ttataaattaattatacaatttcaatgtatt 15146699  T
697 aacta 701  Q
    |||||    
15146698 aacta 15146694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 630 - 701
Target Start/End: Complemental strand, 10820615 - 10820546
Alignment:
630 aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaacta 701  Q
    ||||||||||| ||||||||| ||||||||| ||| |||||||||||||| ||||| |||||| ||||||||    
10820615 aattattaccataaaaggaaactgtttttaa-ctttttataaattaatta-acaatctcaatgtattaacta 10820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 705 - 739
Target Start/End: Complemental strand, 43993214 - 43993180
Alignment:
705 tatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||||||||||||||||||||||| ||||    
43993214 tatataatttcctttttcatatccttaaccggtgc 43993180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 44854467 - 44854509
Alignment:
706 atataatttcctttttcatatccttaaccagtgctccgggagt 748  Q
    ||||||||||||||||  |||||||||||||||| ||||||||    
44854467 atataatttcctttttattatccttaaccagtgccccgggagt 44854509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 606 - 744
Target Start/End: Complemental strand, 983 - 846
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||||||||  ||||||| |||||||||| | |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||      
983 actggttaagcataccataaaagagaattattactataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactac-- 886  T
705 tatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||||||| |||||||||||||||||| ||||||||||    
885 tatataattttctttttcatatccttaactagtgctccgg 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 576 - 745
Target Start/End: Original strand, 68288 - 68456
Alignment:
576 ttgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatt 674  Q
    ||||||| ||||||||| ||||| | || |||||||||||||||  |||||||| ||||||||||  ||||||||| || ||||||| ||||||||| ||    
68288 ttgggtcctgctaaccgatgccttcggggtactggttaagcataccataaaagggaattattaccttaaaaggaaactgattttaactttattataattt 68387  T
675 aattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    | ||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||    
68388 atttacacaattttaatgcattaactac--tatataatttcatttttcatatccttaaccagtgccccggg 68456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 606 - 745
Target Start/End: Complemental strand, 23119 - 22981
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| ||||  ||||||| ||||||||| || ||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||| |||      
23119 actggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaattac-- 23022  T
705 tatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    |||||||||||||||||||||||||||||||||||||||||    
23021 tatataatttcctttttcatatccttaaccagtgctccggg 22981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 577 - 745
Target Start/End: Complemental strand, 15083 - 14916
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| || ||||| |||||||| ||  ||||||||||||||  |||||||| ||||||||||| ||||||||| ||||||| || |||||||||||||    
15083 tgggtcctgttaaccagtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatta 14984  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    | |||||||||||| ||||||||||||  ||||||||||| ||||| ||||| ||||||||||| |||||    
14983 actacacaatttcagtgcattaactac--tatataatttctttttttatatctttaaccagtgccccggg 14916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 577 - 744
Target Start/End: Complemental strand, 41106 - 40940
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||| |||||||| |||| ||| ||||||||||||||| |||||||||| |||||| || ||||||||| ||||||| || | |||||||||||    
41106 tgggtcctgccaaccggtgtctccgggacactggttaagcatatcataaaaggaaattattatcataaaaggaaactgtttttgacttcattataaatta 41007  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    |||||| |||||||||||||||||||   ||||||||||| |||||||||| ||||| | |||||||||    
41006 attacataatttcaatgcattaacta--ttatataatttcatttttcatattcttaatcggtgctccgg 40940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 578 - 745
Target Start/End: Original strand, 53685 - 53851
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||| ||||  |||||||| ||||||||||| ||||||||| | ||||| || |||| |||||||||    
53685 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 53784  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccggg 745  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
53785 ttacacaattttaatgcattaactac--tatataatttcctttttcatacccttaaccagtgccccggg 53851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 578 - 739
Target Start/End: Original strand, 6110 - 6270
Alignment:
578 gggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagga-attattaccacaaaaggaaattgtttttaaccttattataaattaa 676  Q
    ||||| |||||||||||||| || ||  || |||||| ||||  ||||||||  |||||||||| ||||||||| ||||||| || ||||||||| ||||    
6110 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaggggattattaccataaaaggaaactgtttttgactttattataatttaa 6209  T
677 ttacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||||||||||||||||||||    
6210 ttacacaattccaatgcattaactac--tatatagtttcctttttcatatccttaaccagtgc 6270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 577 - 739
Target Start/End: Complemental strand, 479 - 318
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||| | |  ||| |||||||| |||| ||||| ||||||| |||||||||||  | ||||||| ||||||| || ||||||||||||     
479 tgggtcctgctaaccagagtttccaggatactgattaatcatatcataaaagagaattattaccgtagaaggaaactgtttttgactttattataaattt 380  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||||||||||||||||||||   |||||||||| ||||||||||| ||||||||||||    
379 attacacaatttcaatgcattaacta--ttatataattttctttttcatatgcttaaccagtgc 318  T

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Target: scaffold1152 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 575 - 741
Target Start/End: Complemental strand, 866 - 702
Alignment:
575 attgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaat 673  Q
    |||||||| | |||||||||||| || || || | ||||||||||  ||||||| ||||||| |||| ||||| |||  |||||| || |||||||||||    
866 attgggtcctactaaccggtgcc-ccgggctattagttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaat 768  T
674 taattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctc 741  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||| ||||||    
767 taattacacaatttcaatggattaactac--tatataatttcctttttcatatctttaacccgtgctc 702  T

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Target: scaffold0674 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 636 - 739
Target Start/End: Original strand, 7956 - 8057
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
7956 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 8053  T
736 gtgc 739  Q
    ||||    
8054 gtgc 8057  T

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Target: scaffold0549 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 636 - 739
Target Start/End: Complemental strand, 7415 - 7314
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
7415 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatccttaacca 7318  T
736 gtgc 739  Q
    ||||    
7317 gtgc 7314  T

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Target: scaffold0045 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 606 - 744
Target Start/End: Complemental strand, 50706 - 50569
Alignment:
606 actggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacga 704  Q
    ||||||||| |||| |||||||| ||||||||| || ||||| |||||| |||| || ||||||||||||||||| ||||||||||  ||||||||||      
50706 actggttaaacatactataaaagagaattattatcataaaagaaaattgattttgactttattataaattaattatacaatttcaaaacattaactac-- 50609  T
705 tatataatttcctttttcatatccttaaccagtgctccgg 744  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
50608 tatataatttcctttttcatatctttaaccagtgccccgg 50569  T

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Target: scaffold0045; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 648 - 738
Target Start/End: Original strand, 53417 - 53505
Alignment:
648 aaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtg 738  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
53417 aaattgtttttgactttattataaattaattatacaatttcaatgcattaactac--tatataatttccttttttatatccttaaccagtg 53505  T

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Target: scaffold0002 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 584 - 733
Target Start/End: Original strand, 146912 - 147059
Alignment:
584 tgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaaccttattataaattaattacac 682  Q
    ||||||||||||| || ||||||||| |||||||||  |||||| ||| ||||||||  || || ||| ||||||| || ||||||| ||||||||||||    
146912 tgctaaccggtgc-tcgtggatactgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacac 147010  T
683 aatttcaatgcattaactacgatatataatttcctttttcatatccttaac 733  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||||    
147011 aatttcaatgtattaactac--tatataatttcctttttcatatccttaac 147059  T

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Target: scaffold0021 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 628 - 745
Target Start/End: Complemental strand, 116339 - 116224
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    |||||||||| || ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
116339 ggaattattatcataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactac--tatataatttcctttttcatatc 116242  T
728 cttaaccagtgctccggg 745  Q
     |||||| |||| |||||    
116241 tttaacctgtgccccggg 116224  T

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Target: scaffold0206 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 636 - 738
Target Start/End: Original strand, 11029 - 11129
Alignment:
636 taccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacca 735  Q
    ||||| |||| |||| ||||||| || ||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
11029 taccataaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaacta--atatataatttcctttttcatatccttaacca 11126  T
736 gtg 738  Q
    |||    
11127 gtg 11129  T

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Target: scaffold0038 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 628 - 734
Target Start/End: Complemental strand, 25853 - 25750
Alignment:
628 ggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatc 727  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||| |||  ||||||| |||||||||||||||    
25853 ggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattac--tatataa-ttcctttttcatatc 25757  T
728 cttaacc 734  Q
    |||||||    
25756 cttaacc 25750  T

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Target: scaffold0425 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 577 - 702
Target Start/End: Complemental strand, 10897 - 10771
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| ||||||||| |||| ||  |  ||||||||||||||  ||||| || ||||||||||| ||||||||| ||||||| || |||||||||||||    
10897 tgggtcctgctaaccgctgcccccgaggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 10798  T
676 attacacaatttcaatgcattaactac 702  Q
    |||||||||||||||||||||||||||    
10797 attacacaatttcaatgcattaactac 10771  T

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Target: scaffold0050 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 606 - 739
Target Start/End: Complemental strand, 69383 - 69252
Alignment:
606 actggttaagcatattataaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgat 705  Q
    ||||||||||||||  ||||||| ||||||||||  ||||  ||| || |||| || ||||||||||||||||||| ||||| |||| |||||||||  |    
69383 actggttaagcataccataaaagaaattattaccttaaaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaactac--t 69286  T
706 atataatttcctttttcatatccttaaccagtgc 739  Q
    ||||||||| |||||||||||||||||| |||||    
69285 atataatttactttttcatatccttaacgagtgc 69252  T

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Target: scaffold0050; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 743
Target Start/End: Original strand, 33770 - 33845
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaaccagtgctccg 743  Q
    ||||||||||||||||||||||||||| ||||||||   |||||||||||| |||| |||| |||||| |||||||||    
33770 ttataaattaattacacaatttcaatgtattaacta--ttatataatttccattttaatatacttaacaagtgctccg 33845  T

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Target: scaffold0325 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 624 - 739
Target Start/End: Original strand, 17518 - 17630
Alignment:
624 aaaaggaattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaactacgatatataatttcctttttca 723  Q
    |||||||||||||| || ||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||| ||||  |||||||||| ||||||||    
17518 aaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctac--tatataattttctttttca 17614  T
724 tatccttaaccagtgc 739  Q
    ||||| ||| ||||||    
17615 tatccgtaaacagtgc 17630  T

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Target: scaffold0263 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 577 - 734
Target Start/End: Original strand, 19584 - 19740
Alignment:
577 tgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaag-gaattattaccacaaaaggaaattgtttttaaccttattataaatta 675  Q
    |||||| |||||||||| |  ||| ||| |||| |||| ||||| ||||||| ||| ||||| |  ||||||||| ||||||| || ||||||||||||     
19584 tgggtcctgctaaccggagtttccgggacactgattaatcatatcataaaagagaactattatcgtaaaaggaaactgtttttgactttattataaattc 19683  T
676 attacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||||||||||||||||||||||| ||   ||||||||||| |||||||||| |||||||    
19684 attacacaatttcaatgcattaatta--ttatataatttcttttttcatatgcttaacc 19740  T

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Target: scaffold0034 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 602 - 737
Target Start/End: Original strand, 95609 - 95742
Alignment:
602 ggatactggttaagcatattataaaagg-aattattaccacaaaaggaaattgtttttaaccttattataaattaattacacaatttcaatgcattaact 700  Q
    |||||| |||||| ||||  |||||||| ||||||||||| ||||| ||| |||||| | | ||||||||||||||||||| ||||||||| |||||| |    
95609 ggataccggttaaacataccataaaagggaattattaccataaaagaaaactgttttga-ctttattataaattaattacataatttcaattcattaatt 95707  T
701 acgatatataatttcctttttcatatccttaaccagt 737  Q
    |   |||||||||||||||||||||| ||||||||||    
95708 at--tatataatttcctttttcatattcttaaccagt 95742  T

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Target: scaffold0007 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 565 - 698
Target Start/End: Complemental strand, 234052 - 233918
Alignment:
565 ataaataaagattgggtcatgctaaccggtgcctcctggatactggttaagcatattataaaaggaa-ttattaccacaaaaggaaattgtttttaacct 663  Q
    ||||||||| |  ||||| |||||||||||||| || |  ||| |||||| ||||  |||||||||| |||||  || ||||||||| || |||| || |    
234052 ataaataaataaggggtcctgctaaccggtgcccccggagtaccggttaaacataccataaaaggaaattattttcataaaaggaaactgcttttgactt 233953  T
664 tattataaattaattacacaatttcaatgcattaa 698  Q
    ||||||||||||||||||||||||||||| |||||    
233952 tattataaattaattacacaatttcaatgaattaa 233918  T

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Target: scaffold0533 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 734
Target Start/End: Complemental strand, 5136 - 5070
Alignment:
666 ttataaattaattacacaatttcaatgcattaactacgatatataatttcctttttcatatccttaacc 734  Q
    ||||||||||||||||||||||||||  |||||||||  ||||||||||  ||||| |||| |||||||    
5136 ttataaattaattacacaatttcaataaattaactac--tatataattttttttttaatattcttaacc 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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