View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3762_high_45 (Length: 242)
Name: NF3762_high_45
Description: NF3762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3762_high_45 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 45362766 - 45362540
Alignment:
| Q |
1 |
atcaatcaatataagcaaacaactattagtaaaaaataattaaaagaaacctttttctggagagacattcaatttaacatcagaaacaagggaatcactt |
100 |
Q |
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| T |
45362766 |
atcaatcaatataagcaaacaactattagtaaaaaataattaaaagaaacctttttctggagagacattcaatttaacatcagaaacaagggaatcactt |
45362667 |
T |
|
| Q |
101 |
gaactccnnnnnnncatatcaagatccttcgttttcttagcagcagcaacgttttttggagagaacatttcggggtttggcgcagggtaattcccctttg |
200 |
Q |
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||||||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45362666 |
gaactccaaaaaaacatatgaagatcctccgttttcttagcagcaacaacgttttttggagagaacatttcggggtttggcgcagggtaattcccctttg |
45362567 |
T |
|
| Q |
201 |
tcgtagacactgaattatcataattac |
227 |
Q |
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||||||||| ||||||||||||||||| |
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| T |
45362566 |
tcgtagacattgaattatcataattac |
45362540 |
T |
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