View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3763_low_8 (Length: 280)
Name: NF3763_low_8
Description: NF3763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3763_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 1567184 - 1567446
Alignment:
| Q |
1 |
attattagcaacaaaacgttacttttttagtcctaagaaagtttcccttttcaatttaaagttttcaaaatatcaataaatatcaaagatcctagtacat |
100 |
Q |
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| T |
1567184 |
attattagcaacaaaacgttacttttttagtcctaagaaagtttcccttttcaaattaaagttttcaaaaaatcaataaatatcaaagatcctagtacat |
1567283 |
T |
|
| Q |
101 |
cttacaccagctcatttctagagacaaaaccgtaatttcacaccaaatcaaaggttcttattattcaatttacattattaaatttataaattcagttact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1567284 |
cttacaccagctcatttctagagacaaaaccgtaatttcacaccaaatcaaaggttcttattattcaatttacattattaaatttataaattcagttact |
1567383 |
T |
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| Q |
201 |
acttataatgttgatgtaacacattacacataacataacacaaaactttacaccggcaaaacc |
263 |
Q |
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| T |
1567384 |
acttataatgttgatgtaacacattacgcataacataacacaaaactttacaccggcaaaacc |
1567446 |
T |
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