View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3764_high_26 (Length: 227)
Name: NF3764_high_26
Description: NF3764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3764_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 42243292 - 42243079
Alignment:
| Q |
1 |
ttgattactgtataagtataaggattgatcgcactaaataaagcaggacacaaagtcaaggtagatgcttaacatgtctgaagtgaaatagtactccata |
100 |
Q |
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| T |
42243292 |
ttgattactgtataagtataaggattgatcgcactaaataaagcaggacacaaagtcaaggtagatgcttaacatgtctgaagtgaaatagtactccata |
42243193 |
T |
|
| Q |
101 |
tggcacctactctttgaaggtgaaatattccaaaaagcattatatgattatcaacacaatccagcggtggcatctggcaagcaataaattgaacaattaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
42243192 |
tggcacctactctttgaaggtgaaatattccaaaaagcattatatgattatcaacacaatccagcggtggcatctggcaagcaataaatggaacaattaa |
42243093 |
T |
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| Q |
201 |
tagtttcacctcct |
214 |
Q |
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|| ||||||||||| |
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| T |
42243092 |
taatttcacctcct |
42243079 |
T |
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