View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3764_low_20 (Length: 293)

Name: NF3764_low_20
Description: NF3764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3764_low_20
NF3764_low_20
[»] chr8 (22 HSPs)
chr8 (81-277)||(25500413-25500609)
chr8 (81-277)||(24890999-24891195)
chr8 (126-243)||(2620556-2620673)
chr8 (155-277)||(25419620-25419744)
chr8 (155-277)||(25427960-25428084)
chr8 (126-277)||(19643110-19643262)
chr8 (127-277)||(3616464-3616614)
chr8 (127-245)||(2472049-2472167)
chr8 (127-245)||(6110018-6110136)
chr8 (127-245)||(26560831-26560949)
chr8 (129-277)||(24789877-24790025)
chr8 (127-211)||(1667584-1667668)
chr8 (131-277)||(30801611-30801757)
chr8 (127-277)||(1376552-1376702)
chr8 (137-222)||(7057988-7058073)
chr8 (127-211)||(7583766-7583850)
chr8 (127-215)||(20216645-20216733)
chr8 (127-215)||(20236243-20236331)
chr8 (127-244)||(15542613-15542730)
chr8 (127-215)||(29527794-29527882)
chr8 (126-194)||(25178571-25178639)
chr8 (154-198)||(45553477-45553521)
[»] chr5 (26 HSPs)
chr5 (127-277)||(7978395-7978545)
chr5 (127-277)||(31149296-31149446)
chr5 (127-277)||(29456154-29456304)
chr5 (127-277)||(14645680-14645830)
chr5 (127-277)||(18595724-18595874)
chr5 (161-277)||(22631874-22631990)
chr5 (143-277)||(14088027-14088161)
chr5 (127-277)||(14088632-14088782)
chr5 (127-277)||(41616940-41617090)
chr5 (126-277)||(34718364-34718515)
chr5 (128-231)||(10937845-10937948)
chr5 (126-222)||(19254028-19254124)
chr5 (126-222)||(41692048-41692144)
chr5 (127-214)||(4898353-4898440)
chr5 (127-277)||(15718791-15718935)
chr5 (171-270)||(41983605-41983704)
chr5 (189-243)||(6224503-6224557)
chr5 (126-245)||(1061356-1061475)
chr5 (127-231)||(15673469-15673573)
chr5 (127-222)||(6277394-6277489)
chr5 (176-242)||(36470144-36470210)
chr5 (121-245)||(6311366-6311490)
chr5 (127-213)||(24488681-24488767)
chr5 (172-277)||(4572632-4572737)
chr5 (126-222)||(38310208-38310304)
chr5 (127-211)||(32302857-32302940)
[»] chr1 (46 HSPs)
chr1 (125-277)||(28221330-28221482)
chr1 (126-277)||(32835105-32835256)
chr1 (127-243)||(19506780-19506896)
chr1 (127-277)||(945843-945993)
chr1 (131-277)||(38491784-38491930)
chr1 (126-277)||(9222606-9222757)
chr1 (127-277)||(2978780-2978930)
chr1 (127-277)||(13313098-13313248)
chr1 (128-277)||(236878-237027)
chr1 (126-277)||(25059464-25059615)
chr1 (128-277)||(21260345-21260494)
chr1 (127-275)||(44327527-44327674)
chr1 (130-245)||(19996278-19996393)
chr1 (127-277)||(25814927-25815077)
chr1 (127-277)||(43634132-43634281)
chr1 (127-277)||(29054199-29054349)
chr1 (127-277)||(35978103-35978253)
chr1 (127-277)||(424931-425081)
chr1 (127-277)||(2433574-2433724)
chr1 (127-243)||(2974841-2974957)
chr1 (126-277)||(27783863-27784014)
chr1 (126-277)||(42068720-42068871)
chr1 (127-277)||(7842918-7843068)
chr1 (126-222)||(4892874-4892970)
chr1 (126-222)||(29185517-29185613)
chr1 (131-222)||(33794012-33794103)
chr1 (126-222)||(20415397-20415493)
chr1 (127-211)||(28192036-28192120)
chr1 (126-222)||(33362477-33362573)
chr1 (127-201)||(7815339-7815413)
chr1 (127-277)||(35659895-35660045)
chr1 (126-211)||(32133948-32134033)
chr1 (127-277)||(48963968-48964112)
chr1 (127-244)||(30490056-30490173)
chr1 (127-243)||(14106709-14106826)
chr1 (127-231)||(40093859-40093963)
chr1 (127-234)||(10786606-10786713)
chr1 (129-231)||(19494807-19494908)
chr1 (127-211)||(39027201-39027285)
chr1 (127-194)||(12560251-12560318)
chr1 (130-240)||(13796671-13796781)
chr1 (128-231)||(29425790-29425893)
chr1 (125-215)||(9473431-9473521)
chr1 (127-209)||(35738552-35738634)
chr1 (183-245)||(611116-611178)
chr1 (127-195)||(16176603-16176671)
[»] chr3 (36 HSPs)
chr3 (127-277)||(25467849-25467999)
chr3 (127-277)||(11672089-11672239)
chr3 (127-277)||(5040653-5040803)
chr3 (127-277)||(23297926-23298076)
chr3 (126-275)||(48080404-48080553)
chr3 (127-277)||(19619045-19619195)
chr3 (127-277)||(41924329-41924479)
chr3 (127-277)||(44792236-44792386)
chr3 (127-277)||(24987005-24987155)
chr3 (127-277)||(49360311-49360461)
chr3 (154-277)||(39352819-39352942)
chr3 (131-277)||(50480671-50480817)
chr3 (129-277)||(30247644-30247791)
chr3 (127-215)||(50508489-50508576)
chr3 (131-245)||(13735246-13735360)
chr3 (136-222)||(39952919-39953004)
chr3 (127-243)||(45078793-45078908)
chr3 (182-277)||(6408934-6409029)
chr3 (178-277)||(40564293-40564392)
chr3 (127-277)||(50809164-50809314)
chr3 (127-277)||(50866548-50866698)
chr3 (126-211)||(32995710-32995795)
chr3 (127-231)||(35688791-35688895)
chr3 (126-242)||(46819504-46819620)
chr3 (126-208)||(14418641-14418723)
chr3 (128-222)||(41409846-41409940)
chr3 (127-195)||(8340455-8340523)
chr3 (190-277)||(22844798-22844885)
chr3 (126-244)||(26787125-26787244)
chr3 (132-195)||(28956435-28956498)
chr3 (127-277)||(42096330-42096479)
chr3 (127-208)||(5908710-5908791)
chr3 (127-243)||(26291326-26291443)
chr3 (127-211)||(36678654-36678738)
chr3 (126-231)||(19455271-19455376)
chr3 (127-211)||(38694389-38694473)
[»] chr7 (33 HSPs)
chr7 (126-277)||(33067075-33067226)
chr7 (127-277)||(43224688-43224838)
chr7 (127-277)||(43702004-43702154)
chr7 (129-277)||(46181583-46181731)
chr7 (127-277)||(3551135-3551285)
chr7 (127-277)||(12920592-12920742)
chr7 (127-277)||(16567937-16568087)
chr7 (127-277)||(16597575-16597725)
chr7 (127-277)||(31455262-31455412)
chr7 (127-277)||(42284875-42285025)
chr7 (127-221)||(9477988-9478082)
chr7 (127-277)||(39414935-39415085)
chr7 (127-277)||(35092333-35092483)
chr7 (125-277)||(5022781-5022933)
chr7 (127-240)||(10065851-10065964)
chr7 (127-277)||(27398959-27399109)
chr7 (127-277)||(46783438-46783588)
chr7 (126-222)||(17171800-17171896)
chr7 (127-210)||(40787892-40787975)
chr7 (130-245)||(19805428-19805543)
chr7 (126-208)||(25047391-25047473)
chr7 (128-245)||(25309112-25309229)
chr7 (127-215)||(44301157-44301245)
chr7 (127-231)||(45116281-45116385)
chr7 (126-211)||(28066812-28066897)
chr7 (127-200)||(36073633-36073706)
chr7 (159-277)||(3363331-3363449)
chr7 (130-215)||(12499151-12499236)
chr7 (127-210)||(26299870-26299953)
chr7 (127-193)||(7378099-7378165)
chr7 (125-245)||(36073120-36073241)
chr7 (127-211)||(31330698-31330782)
chr7 (127-231)||(40341797-40341901)
[»] chr4 (52 HSPs)
chr4 (127-277)||(34459218-34459368)
chr4 (130-277)||(33983510-33983657)
chr4 (127-277)||(29148603-29148753)
chr4 (126-277)||(42052853-42053004)
chr4 (127-277)||(1730639-1730788)
chr4 (127-277)||(52180361-52180511)
chr4 (126-277)||(28928206-28928357)
chr4 (127-277)||(652608-652758)
chr4 (127-277)||(32655106-32655256)
chr4 (127-277)||(42755714-42755864)
chr4 (128-277)||(2073220-2073363)
chr4 (131-277)||(7250189-7250335)
chr4 (127-277)||(25938730-25938880)
chr4 (126-277)||(38444250-38444399)
chr4 (127-277)||(3094564-3094714)
chr4 (130-267)||(21076209-21076346)
chr4 (128-277)||(52595918-52596067)
chr4 (127-215)||(22312955-22313043)
chr4 (130-277)||(23147778-23147925)
chr4 (126-277)||(38000969-38001120)
chr4 (127-275)||(12186148-12186296)
chr4 (125-231)||(23349102-23349208)
chr4 (132-277)||(41003696-41003842)
chr4 (159-277)||(54978777-54978894)
chr4 (127-275)||(8066333-8066480)
chr4 (126-201)||(45098022-45098097)
chr4 (127-222)||(53141051-53141146)
chr4 (127-242)||(1757622-1757733)
chr4 (127-277)||(14577161-14577311)
chr4 (127-265)||(54932332-54932470)
chr4 (125-210)||(3386811-3386896)
chr4 (127-275)||(2720822-2720970)
chr4 (127-215)||(13082592-13082680)
chr4 (126-222)||(52801798-52801894)
chr4 (136-275)||(21246214-21246352)
chr4 (127-275)||(12188142-12188290)
chr4 (127-242)||(46030611-46030724)
chr4 (128-222)||(29405455-29405549)
chr4 (127-231)||(22830270-22830374)
chr4 (126-277)||(46081103-46081254)
chr4 (125-215)||(39804743-39804833)
chr4 (127-215)||(22306277-22306365)
chr4 (127-211)||(26337198-26337282)
chr4 (127-242)||(46257733-46257846)
chr4 (130-220)||(22248303-22248392)
chr4 (127-206)||(8589414-8589493)
chr4 (125-215)||(2224548-2224638)
chr4 (127-177)||(19444344-19444394)
chr4 (130-236)||(27586168-27586274)
chr4 (126-231)||(31713140-31713245)
chr4 (127-195)||(33733842-33733910)
chr4 (183-215)||(56444740-56444772)
[»] chr2 (29 HSPs)
chr2 (127-277)||(667576-667726)
chr2 (127-277)||(4481417-4481567)
chr2 (127-277)||(33867139-33867289)
chr2 (127-277)||(25425117-25425267)
chr2 (127-234)||(15149826-15149933)
chr2 (128-277)||(29155681-29155830)
chr2 (126-277)||(3329524-3329675)
chr2 (127-277)||(38620752-38620902)
chr2 (128-277)||(31440239-31440388)
chr2 (126-277)||(23232096-23232247)
chr2 (127-277)||(13142173-13142323)
chr2 (127-276)||(20937420-20937569)
chr2 (127-277)||(17961056-17961206)
chr2 (126-222)||(4290065-4290161)
chr2 (127-243)||(4591796-4591911)
chr2 (127-222)||(10391228-10391323)
chr2 (127-211)||(8027051-8027135)
chr2 (130-222)||(30241838-30241930)
chr2 (128-194)||(17249281-17249347)
chr2 (125-194)||(15162436-15162505)
chr2 (131-231)||(18975224-18975324)
chr2 (205-277)||(32422414-32422486)
chr2 (127-201)||(9205570-9205644)
chr2 (127-208)||(41935054-41935135)
chr2 (127-211)||(12345095-12345179)
chr2 (127-215)||(29545575-29545663)
chr2 (127-177)||(7819819-7819869)
chr2 (131-211)||(42970712-42970792)
chr2 (130-194)||(44070050-44070114)
[»] chr6 (17 HSPs)
chr6 (126-277)||(13532529-13532680)
chr6 (126-277)||(33328959-33329110)
chr6 (127-277)||(33331971-33332121)
chr6 (126-277)||(7808126-7808277)
chr6 (127-277)||(31071152-31071302)
chr6 (127-277)||(6337556-6337706)
chr6 (127-277)||(1329158-1329308)
chr6 (127-277)||(31783600-31783749)
chr6 (136-245)||(6938426-6938535)
chr6 (130-270)||(29640361-29640502)
chr6 (126-222)||(1221294-1221390)
chr6 (126-222)||(24446701-24446797)
chr6 (127-243)||(28770187-28770303)
chr6 (127-277)||(20691177-20691327)
chr6 (130-270)||(31510531-31510672)
chr6 (127-211)||(9061692-9061776)
chr6 (130-245)||(12429815-12429930)
[»] scaffold0164 (2 HSPs)
scaffold0164 (126-277)||(6705-6856)
scaffold0164 (126-277)||(14586-14737)
[»] scaffold0312 (1 HSPs)
scaffold0312 (127-277)||(5469-5619)
[»] scaffold0011 (1 HSPs)
scaffold0011 (127-215)||(250643-250731)
[»] scaffold0230 (1 HSPs)
scaffold0230 (126-222)||(27066-27162)
[»] scaffold0005 (1 HSPs)
scaffold0005 (127-277)||(240064-240214)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 81 - 277
Target Start/End: Complemental strand, 25500609 - 25500413
Alignment:
Q  81 ttatccgaagcatgattctatcgtttccctaaacttggagaatctgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25500609 ttatccgaagcatgattctatcgtttccctaaacttggagaatctgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaa 25500510  T
Q  181 taggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25500509 taggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacgaatttaattgaagatgggcacaggtaagggtattatact 25500413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 81 - 277
Target Start/End: Original strand, 24890999 - 24891195
Alignment:
Q  81 ttatccgaagcatgattctatcgtttccctaaacttggagaatctgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaa 180  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24890999 ttatctgaagcatgattctatcgttttcctaaacttggagaatctttaggcatgacaattggacccaggcccaacggatacccgcataaaatacccacaa 24891098  T
Q  181 taggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24891099 tgggtagggtaaaaccccgctatcatgggtctggggatgggtccgggtaatacccacaaatttaattgaagatgggcacgggtaagggtattatact 24891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 2620556 - 2620673
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  2620556 gtagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccg 2620655  T
Q  226 ggtaatacccacaaattt 243  Q
    |||||||||||| |||||    
T  2620656 ggtaatacccacgaattt 2620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 25419744 - 25419620
Alignment:
Q  155 tggatacccgcataaaa--tacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaaga 252  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  25419744 tggatacccgcataaaaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaaga 25419645  T
Q  253 tgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||||||||||    
T  25419644 tgggcacaggtaagggtattatact 25419620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 25428084 - 25427960
Alignment:
Q  155 tggatacccgcataaaa--tacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaaga 252  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  25428084 tggatacccgcataaaaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaaga 25427985  T
Q  253 tgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||||||||||    
T  25427984 tgggcacaggtaagggtattatact 25427960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 19643110 - 19643262
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa-ctccgctatcatgggtctggggacgggtcc 224  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  19643110 gtagggatggcaattggacccatgcccaatggatacccgcataaaatatccacaatgggtagggtaaaacccccgctatcatgggtctggggacgtgtcc 19643209  T
Q  225 gggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||||||| ||   |||||||  |||||||||| ||||||    
T  19643210 gggtaatacccacaaatttaaatgggtatgggcaatggtaagggtactatact 19643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 3616464 - 3616614
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  3616464 tagggatggcaattggacccagacccaatgggtacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 3616563  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  3616564 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 3616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 2472049 - 2472167
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||| | ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  2472049 tagggataagaattggatccaggtccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctatcatgggtctggggaagggtccgg 2472148  T
Q  227 gtaatacccacaaatttaa 245  Q
    ||||||||||| |||||||    
T  2472149 gtaatacccacgaatttaa 2472167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 6110136 - 6110018
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||| |  ||||||||||| |||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||| ||    
T  6110136 tagggatggcaattggacccatgttcaatggatacctgcataaaatacccacaatgggtagggtaaaatcccactatcatgggtctggggacgggtctgg 6110037  T
Q  227 gtaatacccacaaatttaa 245  Q
    ||||||||||| |||||||    
T  6110036 gtaatacccacgaatttaa 6110018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 26560831 - 26560949
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| |   ||||||||||||| |||||||| ||||||||||||||||||| || || |||||| |||||||||||||||||    
T  26560831 tagggatgtcaattggacccagacttgatggatacccgcaaaaaatacctacaataggtagggtaaaacccccctttcatggatctggggacgggtccgg 26560930  T
Q  227 gtaatacccacaaatttaa 245  Q
    |||||||||||||||||||    
T  26560931 gtaatacccacaaatttaa 26560949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 277
Target Start/End: Complemental strand, 24790025 - 24789877
Alignment:
Q  129 gggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggt 228  Q
    |||||| ||||||||||||| ||||||| ||||||||| |||||| ||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||||    
T  24790025 gggatggcaattggacccagacccaatgaatacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggt 24789926  T
Q  229 aatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| |||| || | |||||||| ||||||| || ||||||    
T  24789925 aatacccacaaaattaaatggatatgggcacgggtaaggatactatact 24789877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 1667668 - 1667584
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  1667668 tagggatggcaattggacccaggcccaatggatacccgcataaattacccacaatgggtagggtaaaaccccgctatcataggtc 1667584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 277
Target Start/End: Complemental strand, 30801757 - 30801611
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    |||| |||||| ||||||| || |||||||| |||| |||||| ||||||| |||| ||||||| |||||| |||||||| |||| ||||||| ||||||    
T  30801757 gatggcaattgaacccaggtccgatggatactcgcaaaaaatatccacaatgggtacggtaaaattccgctttcatgggtttgggcacgggtctgggtaa 30801658  T
Q  231 tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| |||||||| ||   |||||||| |||||||||| ||||||    
T  30801657 tacccataaatttaaatgggtatgggcacgggtaagggtactatact 30801611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 1376702 - 1376552
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||||   |||||| |||||||| |||||||| ||  | ||||||||||||| ||||| | |||||| |||| |||| |  ||    
T  1376702 tagggatgacaattggacccagattcaatgggtacccgcaaaaaatacctacggtgggtagggtaaaaccccgcttttatgggtttgggcacggatatgg 1376603  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| || |||| ||   |||||||| |||||||||| ||||||    
T  1376602 gtaatacccaccaaattaaatgggtatgggcacgggtaagggtactatact 1376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 7058073 - 7057988
Alignment:
Q  137 aattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||||||| || |||| |||||||| |||||||||||||||||||||||||||   |||| |||||||| |||| ||||||    
T  7058073 aattggacccaggtccgatgggtacccgcaaaaaatacccacaataggtagggtaaaatctcgctttcatgggtttgggcacgggt 7057988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 7583850 - 7583766
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||| || ||||||||||||||||| |||||||||| || |||| |||| |||| ||||||||||||| ||||| |||||||||    
T  7583850 taggggtggcaattggacccaggcccgatggatacccacaaaaaaaacccgcaatgggtagggtaaaaccccgctttcatgggtc 7583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 20216733 - 20216645
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||| ||||||||||||| ||| ||||  ||| ||| |||||||||||||| ||||||||||||| || || |||||||| ||||    
T  20216733 tagggatggcaattggacccagacccgatgggcacctgcaaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatggg 20216645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 20236331 - 20236243
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||| ||||||||||||| ||| ||||  ||| ||| |||||||||||||| ||||||||||||| || || |||||||| ||||    
T  20236331 tagggatggcaattggacccagacccgatgggcacctgcaaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatggg 20236243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 15542730 - 15542613
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||||| | ||||  ||||||| ||||||||| |||||| || |||||||| ||||| | |||||| |||    ||||||||    
T  15542730 tagggatgacaattggacccaggctcgatgggcacccgcaaaaaatacccgcaatagata-ggtaaaaccccgcttttatgggtatggccttgggtccgg 15542632  T
Q  227 gtaa-tacccacaaattta 244  Q
    |||| ||||| ||||||||    
T  15542631 gtaattacccgcaaattta 15542613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 29527794 - 29527882
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||  ||||| ||||||||  | ||||||||||||| ||||||| |  ||| ||||||||||||||||| | |||||||||||||    
T  29527794 tagggatagcaattagacccaggttcgatggatacccgcaaaaaatactcgtaatgggtagggtaaaactccgttttcatgggtctggg 29527882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 25178571 - 25178639
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa 194  Q
    ||||||||||||||| ||| |||| | ||||  |||||||| |||||||||| ||| ||||||||||||    
T  25178571 gtagggatgacaattagactcaggtctaatgagtacccgcaaaaaatacccataatgggtagggtaaaa 25178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 45553521 - 45553477
Alignment:
Q  154 atggatacccgcataaaatacccacaataggtagggtaaaactcc 198  Q
    ||||||| ||||| |||||| ||||||| ||||||||||||||||    
T  45553521 atggatatccgcaaaaaatatccacaatgggtagggtaaaactcc 45553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 7978545 - 7978395
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  7978545 tagggatgacaattggacccaggcccaattgatacccgcataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgagtccgg 7978446  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||||| || | |||||||| | |||||||| ||||||    
T  7978445 gtaatacccacaaatttaaatggatatgggcacggataagggtactatact 7978395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 31149296 - 31149446
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||||| | | ||||||    
T  31149296 tagggatgacaattggacccagacccaatggatacccgtataaaatacccacaatggatagggtaaaaccctgctatcatgggtctgggaatgagtccgg 31149395  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||||| |||  |||||||| |||||||||| ||||||    
T  31149396 gtaatacccacaaatttaaatgagtatgggcacgggtaagggtactatact 31149446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 29456304 - 29456154
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||| |||||||||||||||||    
T  29456304 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaatcccgctatcatggatctggggacgggtccgg 29456205  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||| | || | |||||||| | ||||| || ||||||    
T  29456204 gtaatacccacgaattttaatggatatgggcacggataaggatactatact 29456154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 14645830 - 14645680
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  14645830 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 14645731  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  14645730 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 14645680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 18595874 - 18595724
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||  ||||||||||||||||||||||||||||||    
T  18595874 tagggatggcaattggacccaggcccaatggatacccgcataaaatactcacaatgggtaggataaaatcccgctatcatgggtctggggacgggtccgg 18595775  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     ||||| |||| ||||||| ||   ||| |||| |||||||||| ||||||    
T  18595774 ataatatccacgaatttaaatgggtatgagcacgggtaagggtactatact 18595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 22631874 - 22631990
Alignment:
Q  161 cccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcaca 260  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||   |||||||||    
T  22631874 cccgcataaaatatccacaatgggtagggtaaaactccgctatcatgtgtctggggacgggtctgggtaatacccacgaatttaaatgggtatgggcaca 22631973  T
Q  261 ggtaagggtattatact 277  Q
    |||||||||| ||||||    
T  22631974 ggtaagggtactatact 22631990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 143 - 277
Target Start/End: Complemental strand, 14088161 - 14088027
Alignment:
Q  143 acccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatt 242  Q
    |||||| |||||||||| |||||||||||||||||| || | ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  14088161 acccagacccaatggatgcccgcataaaatacccacgatggatagggtaaaaccccgctatcatgggtatggggacgggtccgggtaatacccacgaatt 14088062  T
Q  243 taattgaagatgggcacaggtaagggtattatact 277  Q
    ||| ||   ||||| || |||||||||| ||||||    
T  14088061 taaatgggtatgggtacgggtaagggtactatact 14088027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 14088782 - 14088632
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||| || ||||| ||||||| |||||||| |||||||| ||||| |||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  14088782 tagggttggcaatttgacccagacccaatgggtacccgcaaaaaatgcccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 14088683  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  14088682 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 14088632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 41617090 - 41616940
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||| |||| ||||||||||||||||| |||||||||||||| |||||| |||||| ||||| | ||||||||||  |||||| |||    
T  41617090 tagggatggcaattggatccagacccaatggatacccgcaaaaaatacccacaatgggtaggataaaaccccgcttttatgggtctggtcacgggtacgg 41616991  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||| | |||| |||| ||   |||||||| |||||||||| ||||||    
T  41616990 gtaatactcgcaaaattaaatgggtatgggcacgggtaagggtactatact 41616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 34718364 - 34718515
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||  |    
T  34718364 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt-ag 34718462  T
Q  226 ggtaa-tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||| ||||| ||||||| | ||   |||| ||| |||||||||||||||||    
T  34718463 ggtaattacccgcaaattttaatgggtatggacacgggtaagggtattatact 34718515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 10937948 - 10937845
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||| ||||| | |||||| ||||   |||||||||    
T  10937948 agggatggcaattgaacccaggcccgatgggtacccgcaaaaaatacccacaataggtagggtaaaaccccgcttttatgggtatgggcttgggtccggg 10937849  T
Q  228 taat 231  Q
    ||||    
T  10937848 taat 10937845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 19254028 - 19254124
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||||||||||||||||| ||| ||||  ||| ||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| ||||||    
T  19254028 gtagggatgacaattggacccagacccgatgggcaccagcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggtacgggt 19254124  T

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Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 41692048 - 41692144
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  41692048 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 41692144  T

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Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 4898353 - 4898440
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctgg 214  Q
    |||||||| ||||||||||||| ||| |||||||||| || |||| |||| |||| ||||||||||||| ||||| ||||||||||||    
T  4898353 tagggatggcaattggacccagacccgatggatacccacaaaaaaaacccgcaatgggtagggtaaaaccccgctttcatgggtctgg 4898440  T

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Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 15718791 - 15718935
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||| ||   ||||||||||||||| |||||||||||||| ||||||||||||| || || | |||||||      ||||| |||    
T  15718791 tagggatggcaattggacctagattcaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccacttttatgggtc------cgggtacgg 15718884  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||| ||| |||||||||| ||||||    
T  15718885 gtaatacccacaaaattaaatgggtatggacacgggtaagggtactatact 15718935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 41983704 - 41983605
Alignment:
Q  171 atacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggta 270  Q
    ||||| ||||| ||||||||||||| |||||||||| ||||||||||||||  ||||||||| |||| ||||||| ||   |||| ||||||||||||||    
T  41983704 atacctacaatgggtagggtaaaaccccgctatcataggtctggggacggggacgggtaatatccacgaatttaaatgggtatggacacaggtaagggta 41983605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 6224503 - 6224557
Alignment:
Q  189 gtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaattt 243  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  6224503 gtaaaaccccgctatcatgggtctggggaagggtccgggtaatacccacaaattt 6224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 1061475 - 1061356
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||||   |||| | |||||||| |||||||||||||| |||||| |||||| || || | ||| ||||| | |||||| ||    
T  1061475 gtagggatggcaattggacccagattcaataggtacccgcaaaaaatacccacaatgggtaggataaaaccccacttttatgagtctgagcacgggtacg 1061376  T
Q  226 ggtaatacccacaaatttaa 245  Q
    ||||||||| ||||| ||||    
T  1061375 ggtaatacctacaaaattaa 1061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 15673469 - 15673573
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| ||||||||||| ||||  |||| || ||||||||| |||| ||||||||||||| ||||| | |||| | |||| | ||||||||    
T  15673469 tagggatggcaattagacccaggcccgatgggcacccacaaaaaatacccgcaatgggtagggtaaaaccccgctttaatggatatgggcatgggtccgg 15673568  T
Q  227 gtaat 231  Q
    |||||    
T  15673569 gtaat 15673573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 6277394 - 6277489
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||||||| ||||| ||| |||  || ||||  ||||||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| ||||||    
T  6277394 tagggatggcaatttgactcagatccgatgggcacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggt 6277489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 36470144 - 36470210
Alignment:
Q  176 cacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatt 242  Q
    |||||| | ||||||||||||||||| || ||||| |||  ||||||||||||||||||||||||||    
T  36470144 cacaatggatagggtaaaactccgctttcttgggtatggacacgggtccgggtaatacccacaaatt 36470210  T

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Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 6311490 - 6311366
Alignment:
Q  121 aatctgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgg 220  Q
    ||||| || ||||||||||||||||  || || ||||||||||||| |||||  || |||| ||||||||||||| ||||| |||||||| || | ||||    
T  6311490 aatctctaaggatgacaattggaccttggtccgatggatacccgca-aaaattgcctcaatgggtagggtaaaaccccgctttcatgggtttgtgcacgg 6311392  T
Q  221 gtccgggtaa-tacccacaaatttaa 245  Q
    |||   |||| |||||||||||||||    
T  6311391 gtctatgtaattacccacaaatttaa 6311366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 24488681 - 24488767
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctg 213  Q
    |||||||||||||||  ||||||| | ||||||  ||||| ||||||| |||||| |||||| |||||  ||||| |||||||||||    
T  24488681 tagggatgacaattgagcccaggctcgatggatcaccgcaaaaaatactcacaattggtaggataaaatcccgctttcatgggtctg 24488767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 4572737 - 4572632
Alignment:
Q  172 tacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtat 271  Q
    |||||||||| |||||| ||||||   ||| | |||||| |||| | |||| ||||||||||||||||| |||| || | |||||||| |||||  ||||    
T  4572737 tacccacaatgggtaggataaaaccatgcttttatgggtatgggcatgggtacgggtaatacccacaaaattaaatggatatgggcacgggtaaaagtat 4572638  T
Q  272 tatact 277  Q
    ||||||    
T  4572637 tatact 4572632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 38310304 - 38310208
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||||| ||||||||||||||||  || ||||||| ||||| |||||| | | ||| |||| |||||||| ||||| |||| ||| |||| ||||||    
T  38310304 gtagggttgacaattggacccagatccgatggatatccgcaaaaaatatctataatgggtatggtaaaaccccgctttcataggtatgggcacgggt 38310208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 32302940 - 32302857
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||| ||  ||||| ||| | | ||||||||||| || |||| |||||||| ||||| |||||||||    
T  32302940 tagggatggcaattggacccagaccttatggacacctgtaaaaaatacccactatgggta-ggtaaaaccccgctttcatgggtc 32302857  T

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Target: chr1 (Bit Score: 109; Significance: 7e-55; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 125 - 277
Target Start/End: Complemental strand, 28221482 - 28221330
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtcc 224  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28221482 tgtagggatggcaattggacccaggcccaatggatacccgcataaaatagccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtcc 28221383  T
Q  225 gggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||||||| ||   ||||||||  ||||||||| ||||||    
T  28221382 gggtaatacccacaaatttaaatgggtatgggcacgagtaagggtactatact 28221330  T

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Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 32835105 - 32835256
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  32835105 gtagggatgacaattgaacctaggcccaatgaatacctgcataaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtcca 32835204  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| ||||||| || | || ||||| |||||||||| ||||||    
T  32835205 ggtaatacccacgaatttaaatggatataggcacgggtaagggtactatact 32835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 19506896 - 19506780
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  19506896 tagggatggcaattggacccaggcccaatggatacccgcataaaatacccacaatggatagggtaaaaccccgctatcatgggtctggggacgggtccgg 19506797  T
Q  227 gtaatacccacaaattt 243  Q
    ||||||||||| |||||    
T  19506796 gtaatacccacgaattt 19506780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 945993 - 945843
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  945993 tagggatgacaattgaacccaggcccaatggatacccacataaaatatccacaatgggtagagtaaaaccccgctatcatgggtctggggacgggtccgg 945894  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||| | ||   |||||||| ||||||||| |||||||    
T  945893 gtaatacccacgaattttaatgggtatgggcacgggtaagggtcttatact 945843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 277
Target Start/End: Complemental strand, 38491930 - 38491784
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  38491930 gatggcaattggacccatacccaatggatacccgcataaaatacccacaatgggtagggtaaaaccctactatcatgggtatggggaagggtccgggtaa 38491831  T
Q  231 tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||| ||||||| || | |||||||| |||||||||| ||||||    
T  38491830 tacccacgaatttaaatggatatgggcacgggtaagggtactatact 38491784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 9222757 - 9222606
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| ||    
T  9222757 gtagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacg 9222658  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  9222657 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 9222606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 2978930 - 2978780
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  2978930 tagggatggcaattggacccaggtccaatggataaccgcataaaatacccataatggatagggtaaaaccccgctatcatgggtctggggacgggtccgg 2978831  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||||| ||||| | ||   |||||||| ||||| |||| ||||||    
T  2978830 ataatacccacgaattttaatgggtatgggcacgggtaaaggtactatact 2978780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 13313248 - 13313098
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |  |||||||||| |||||| |||    
T  13313248 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttctgggtctgggcacgggtacgg 13313149  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  13313148 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 13313098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 237027 - 236878
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||||||||| |||| |||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| |||||||||||    
T  237027 agggatggcaattggacccaagcccgatggttacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtccggg 236928  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||| ||   |||||||| ||||||| || ||||||    
T  236927 taatacccacaaatttaaatgggtatgggcacgggtaaggttactatact 236878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 25059615 - 25059464
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||||| |||||||||| | ||||||||||| ||||| ||||||||||||| ||||||||||||||  ||||| ||||||     
T  25059615 gtagggatggcaattggacccaggctcaatggatactcacataaaatacctacaatgggtagggtaaaaccccgctatcatgggttcggggatgggtcca 25059516  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| ||||| | || | |||||||| |||||||||| ||||||    
T  25059515 ggtaatacccacgaattttaatggatatgggcacgggtaagggtactatact 25059464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 21260345 - 21260494
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||| || || ||||||||||||| ||| |||||||| |||||||||||||||||     
T  21260345 agggatgggaattggacccaggcccaatgaatacccgcataaaatacctacgatgggtagggtaaaaccccgttatcatggatctggggacgggtccgga 21260444  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| ||||||| ||   |||||||| ||||| |||| ||||||    
T  21260445 taatacccacgaatttaaatgggtatgggcacgggtaaaggtactatact 21260494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 44327527 - 44327674
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||||| |||||| |||    
T  44327527 tagggatggcaattgggcccagacccaatggatacc-gcaaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctgggcacgggtacgg 44327625  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    |||||||||||||| |||| ||   |||||||| ||||| |||| ||||    
T  44327626 gtaatacccacaaaattaaatgggtatgggcacgggtaatggtactata 44327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 19996278 - 19996393
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| |||||||||||| || ||||| ||||||| ||||||||  || ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19996278 ggatggcaattggacccatgctcaatgaatacccgtataaaatattcataatgggtagggtaaaactccgctatcatgggtctggggacgggttcgggta 19996377  T
Q  230 atacccacaaatttaa 245  Q
     |||||||||||||||    
T  19996378 ttacccacaaatttaa 19996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 25814927 - 25815077
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| |||||||  |||||||||||||||| |||||| ||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  25814927 tagggatggcaattagacccagatccaatggatacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacgg 25815026  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||| ||| |||||||||| ||||||    
T  25815027 gtaatacccacaaaattaaatgggtatggacacgggtaagggtactatact 25815077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 43634132 - 43634281
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  |||||||||||| ||| |||||||||||| |||| |||||||||||||||| | || |||||||  |||||| |||    
T  43634132 tagggatggcaattggacccagatccaatggatacc-gcaaaaaatacccacattaggcagggtaaaactccgcttttataggtctggacacgggtacgg 43634230  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  43634231 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 43634281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 29054199 - 29054349
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||   ||||||  |||||||| |||||||| ||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  29054199 tagggatgacaattggacccatatccaatgagtacccgcaaaaaatacctacaatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacgg 29054298  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     ||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  29054299 ataatacccacaaaattaaatgggcatgggcacgggtaagggtactatact 29054349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 35978103 - 35978253
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| |||||||| |||||||| ||||||  |||||| ||||||||||||  ||||| | ||||||||||| |||||| |||    
T  35978103 tagggatggcaattggacccagacccaatgggtacccgcaaaaaatattcacaatgggtagggtaaaatcccgcttttatgggtctgggcacgggtacgg 35978202  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| ||||| |||| ||||||    
T  35978203 gtaatacccacaaaattaaatgggtatgggcacgggtaatggtactatact 35978253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 425081 - 424931
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||| |||||||||  | ||||| |||||| | |||||| |||||||  |||||||||||  || || | ||||||||||| ||||||||||    
T  425081 tagggatgacaactggacccagatctaatgggtacccgtaaaaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgg 424982  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  424981 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 424931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 2433724 - 2433574
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||| |||||  ||| | ||||| || |||  | ||||||||    
T  2433724 tagggatgacaattggatccagacccaatggatacccgcaaaaaatacccacaatgggtaggataaaatcccgttttcatgagtatggacatgggtccgg 2433625  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||||||||||    ||   |||||||| |||||||||||||||||    
T  2433624 ataatacccacaaattgttatgggtatgggcacgggtaagggtattatact 2433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 2974841 - 2974957
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||  || ||| ||||| ||||||  ||| |||||| ||| |||||||||||||||    
T  2974841 tagggatggcaattggactcaggtccaatggatacccgcataaaatattcataatgggtagcgtaaaatcccgttatcataggtttggggacgggtccgg 2974940  T
Q  227 gtaatacccacaaattt 243  Q
    ||||||| ||| |||||    
T  2974941 gtaatacacacgaattt 2974957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 27784014 - 27783863
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||||  ||||||||||||| || |||||| ||||||| ||||||||||||| ||||| | |||| | |||  | |||| ||    
T  27784014 gtagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatttggacatgggtacg 27783915  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  27783914 ggtaatacccacaaaattaaatgggtacgggcacgggtaagggtactatact 27783863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 42068720 - 42068871
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||||| ||||| | ||||   |||| ||| || ||    
T  42068720 gtagggatggcaattggacccaaatccaatgggtacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggacttgggcacgagtacg 42068819  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| || | |||  ||| |||||||||| ||||||    
T  42068820 ggtaatacccacaaaattaaatggatatgtacacgggtaagggtactatact 42068871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 7843068 - 7842918
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||| || |  ||||||||||||||| ||||||| || ||| |||||||||||||  | |||||||||||||| |||||||| | |    
T  7843068 tagggatggcaattggactcatgttcaatggatacccgcacaaaatactcataatgggtagggtaaaacctcactatcatgggtctgaggacgggttcag 7842969  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||||| ||||||| || |  |||||||  ||||||||| ||||||    
T  7842968 ataatacccacgaatttaaatggatttgggcacgagtaagggtactatact 7842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 4892874 - 4892970
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  4892874 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 4892970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 29185613 - 29185517
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  29185613 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 29185517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 33794012 - 33794103
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||||||| | ||||||||||||||||| | |||||| |||| ||||||    
T  33794012 gatgacaattggacccagacccaatgggtacccgccaaaaatacccacaatggatagggtaaaactccgcttttatgggtatgggcacgggt 33794103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 20415493 - 20415397
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| |||||||||||||  || ||||  ||||||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| ||||||    
T  20415493 gtagggatggcaattggacccagatccgatgggcacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggt 20415397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 28192036 - 28192120
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||| ||| ||||| ||||||| ||||||||||| || ||||||||||||| ||||| |||||||||    
T  28192036 tagggatggcaattggacccagaccctatggacacccgcaaaaaatacccactatgggtagggtaaaaccccgctttcatgggtc 28192120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 33362477 - 33362573
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| |||||| |||||| ||||| |||||| | |||| ||||||    
T  33362477 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtaggataaaaccccgctttcatggatatgggcacgggt 33362573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 7815413 - 7815339
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgct 201  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||||||  |||| |||||||||||||||||||    
T  7815413 tagggatgacaattggacccagacccaatggacactcgcaaaaaatacctgcaatgggtagggtaaaactccgct 7815339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 35660045 - 35659895
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||| |||||||||||||| |   |||| | || ||| ||||||  |||||||| ||| ||||||||||||| |||||||||||   |||||| |||    
T  35660045 tagggataacaattggacccagacatgatgggtgcctgcaaaaaatattcacaatagatagagtaaaactccgctttcatgggtctgaacacgggtgcgg 35659946  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||||||||||||| |  | |||||||| | ||||||| |||||||    
T  35659945 ataatacccacaaatttaaatagatatgggcacggataagggtgttatact 35659895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 32134033 - 32133948
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||||||||||||||||||||| ||| ||||  ||||||| |||||| || |||| ||||||||||||| ||||| |||||||||    
T  32134033 gtagggatgacaattggacccagaccctatgggcacccgcaaaaaatatccgcaatgggtagggtaaaaccccgctttcatgggtc 32133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 48963968 - 48964112
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||  ||  | ||||| |||||||| |||||| ||||||  ||||||||||||| ||||| | ||||||||||| |      |||    
T  48963968 tagggatggcaattggacttagatcgaatgggtacccgcaaaaaatatccacaaagggtagggtaaaaccccgcttttatgggtctgggca------cgg 48964061  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   ||||||||||||||||||| ||||||    
T  48964062 gtaatacccacaaaattaaatgggtatgggcacaggtaagggtactatact 48964112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 30490173 - 30490056
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||||  | ||||  ||||||| ||||||||||||||||||||||| |||| ||||| | |||||| ||||   ||||||||    
T  30490173 tagggatggcaattggacccaggttcgatgggcacccgcaaaaaatacccacaataggtagggt-aaaccccgcttttatgggtatgggcttgggtccgg 30490075  T
Q  227 gtaa-tacccacaaattta 244  Q
    |||| ||||| ||||||||    
T  30490074 gtaattacccgcaaattta 30490056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 14106826 - 14106709
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||| || ||||| ||||||| ||||  ||| |||| ||||||||||||| ||||| ||||| || ||||   ||||||||    
T  14106826 tagggatggcaattggacccaggtcctatggacacccgcaaaaaaaccccgcaatgggtagggtaaaaccccgctttcatgagtatgggcttgggtccgg 14106727  T
Q  227 gtaa-tacccacaaattt 243  Q
    |||| ||||| |||||||    
T  14106726 gtaattacccgcaaattt 14106709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 40093859 - 40093963
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| | ||| ||||||||||| ||||||| ||||| ||| ||||| |||| ||||||||||| | ||||| |||||||| |||| | |||| |||    
T  40093859 tagggatggccattagacccaggcccgatggatatccgcaaaaattacccgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggttcgg 40093958  T
Q  227 gtaat 231  Q
    |||||    
T  40093959 gtaat 40093963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 10786713 - 10786606
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||| || |||| ||||||||  |||||||  |||| ||||||||||| ||| ||| ||||| ||||||| | ||||| ||    
T  10786713 tagggatggcaattggacccaggtccgatgggtacccgcaacaaatacctgcaatgggtagggtaaagctctgctttcatgagtctgggtatgggtctgg 10786614  T
Q  227 gtaatacc 234  Q
    ||| ||||    
T  10786613 gtattacc 10786606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 19494908 - 19494807
Alignment:
Q  129 gggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggt 228  Q
    |||||| |||||||||||||| || |||||||||| || |||| |||  |||| ||||||||||||  ||||| ||||||||||||  | ||||||||||    
T  19494908 gggatggcaattggacccaggtccgatggatacccacaaaaaaaaccg-caatgggtagggtaaaatcccgctttcatgggtctggacatgggtccgggt 19494810  T
Q  229 aat 231  Q
    |||    
T  19494809 aat 19494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 39027285 - 39027201
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||| | | ||||  ||||||| ||||||||| | || ||||||||||||| ||||| |||||||||    
T  39027285 tagggatggcaattggacccagactctatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtc 39027201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 12560251 - 12560318
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa 194  Q
    |||||||| |||||||||| || |||||||| |||||| | |||||| ||| ||||||||||||||||    
T  12560251 tagggatggcaattggacctagacccaatgggtacccgtaaaaaatatccataataggtagggtaaaa 12560318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 13796671 - 13796781
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaa-tacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggt 228  Q
    |||||||||||| |||||| || |||||||| ||||| |||| |||| | ||| ||||||||||| | ||||| ||| | || |||  ||||||||||||    
T  13796671 ggatgacaattgaacccagacctaatggataaccgcaaaaaaatacctataatgggtagggtaaacc-ccgctttcaggagtttggacacgggtccgggt 13796769  T
Q  229 aatacccacaaa 240  Q
    ||||||||||||    
T  13796770 aatacccacaaa 13796781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 29425790 - 29425893
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| ||||| |||| |||||| ||||| ||||||| ||||||||| |||| | ||||||||||| ||||| |||| | | |||| | || ||||||    
T  29425790 agggatggcaattagaccaaggcccgatggacacccgcaaaaaatacccgcaatggatagggtaaaaccccgctttcatagatatgggcatggctccggg 29425889  T
Q  228 taat 231  Q
    ||||    
T  29425890 taat 29425893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 9473521 - 9473431
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||||||| |||||||||||||| ||| |||   |||||||  ||||| ||||||| |||||| ||||||||| || |||||||| ||||    
T  9473521 tgtagggataacaattggacccagacccgatgagcacccgcaacaaatatccacaatgggtaggataaaactccactttcatgggtatggg 9473431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 35738552 - 35738634
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatggg 209  Q
    |||||||| ||||||||||||| ||| ||||  ||| ||| ||||||||| | || ||||||||||||| ||||| |||||||    
T  35738552 tagggatggcaattggacccagaccctatgggcacctgcaaaaaatacccgctatgggtagggtaaaaccccgctttcatggg 35738634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 611178 - 611116
Alignment:
Q  183 ggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaa 245  Q
    ||||| ||||||||||||| |||||| | |||| ||||||||||||| |||||  ||||||||    
T  611178 ggtagagtaaaactccgctttcatggatatgggcacgggtccgggtagtacccgtaaatttaa 611116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 16176603 - 16176671
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaac 195  Q
    ||||||||||||||||| |||  ||||||||| ||||||| |||||| ||  ||| ||||| |||||||    
T  16176603 tagggatgacaattggatccaaacccaatggacacccgcaaaaaatatccgtaatgggtagagtaaaac 16176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 25467999 - 25467849
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  25467999 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaatgggtagggtaaaatcccgctatcatgggtctggggacgggtccgg 25467900  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| |||| ||||||| ||   ||||||||  ||||||||| ||||||    
T  25467899 gtaatatccacgaatttaaatgggtatgggcacgagtaagggtactatact 25467849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 11672239 - 11672089
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  11672239 tagggatggcaattggacccaggcccaatggatacccacataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 11672140  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| |||| ||||| | ||   |||||||| |||||||||| ||||||    
T  11672139 gtaatatccacgaattttaatgggtatgggcacgggtaagggtactatact 11672089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 5040653 - 5040803
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||| |||||    
T  5040653 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctatcatggatctggggacggatccgg 5040752  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||| | ||   |||||||| ||||||| || ||||||    
T  5040753 gtaatacccacgaattttaatgggtatgggcacgggtaaggatactatact 5040803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 23297926 - 23298076
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||| ||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  23297926 tagggatgacaattagacccaggttcaatggataccagcataaaatacccacaatgggtagggtaaaaccccactatcatgggtctggggacgagtccgg 23298025  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||| | ||   ||| |||| |||||||||| ||||||    
T  23298026 gtaatacccacaaattttaatgggtatgagcacgggtaagggtactatact 23298076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 48080553 - 48080404
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||  | |||||||||||||    
T  48080553 gtagggatgtcaattggacctaggaccaatggataccagcataaaatacccacaattggtagggtaaaaccccgctatcaaggaaccggggacgggtccg 48080454  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    |||||||||||| ||||||| ||   |||||||| |||||||||| ||||    
T  48080453 ggtaatacccacgaatttaaatgggtatgggcacgggtaagggtactata 48080404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 19619195 - 19619045
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| |||||||| ||||| || |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  19619195 tagggatggcaattggacccagacccaatgggtacccacaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 19619096  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  19619095 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 19619045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 41924479 - 41924329
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||| ||||   ||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  41924479 tagggatggcaattggatccagattcaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggtacgggtacgg 41924380  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| |||| |||||||| |||||||||| ||||||    
T  41924379 gtaatacccacaaaattaaatgaatatgggcacgggtaagggtactatact 41924329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 44792236 - 44792386
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |  | |||||||| |||||| |||    
T  44792236 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttctaggtctgggcacgggtacgg 44792335  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  44792336 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 44792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 24987005 - 24987155
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||| ||| ||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||  |||||| |||    
T  24987005 taggaatggcaattggacccaaacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctggacacgggtacgg 24987104  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  24987105 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 24987155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 49360461 - 49360311
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||| |||||||| |||||| ||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  49360461 tagggatggcaattggacccagatccaatgggtacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 49360362  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  49360361 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactatact 49360311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 39352942 - 39352819
Alignment:
Q  154 atggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagat 253  Q
    |||| |||||||| |||||||||||||| ||||||||||||| | ||| | ||||||||||| |||||| ||||||||||||||||| |||| ||   ||    
T  39352942 atgggtacccgcaaaaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggtacgggtacgggtaatacccacaaaattaaatgggtat 39352843  T
Q  254 gggcacaggtaagggtattatact 277  Q
    |||||| |||||||||| ||||||    
T  39352842 gggcacgggtaagggtactatact 39352819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 50480671 - 50480817
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    |||| |||||||||||||  ||||||||||||| || |||||| ||||||| ||||||||||||| ||||| | |||| |||||  |||||| |||||||    
T  50480671 gatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctggacacgggtacgggtaa 50480770  T
Q  231 tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  50480771 tacccacaaaattaaatgggtacgggcacgggtaagggtactatact 50480817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 277
Target Start/End: Original strand, 30247644 - 30247791
Alignment:
Q  129 gggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggt 228  Q
    |||||| || |||||||||| ||| ||||| ||||||| |||||||||||||| ||||||||||||||||||| | |||||| |||| ||||||  ||||    
T  30247644 gggatggcagttggacccagacccgatggacacccgcaaaaaatacccacaatgggtagggtaaaactccgcttttatgggtatgggcacgggt-agggt 30247742  T
Q  229 aatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||  |||||||||| | ||   |||| |||||||||| ||| ||||||    
T  30247743 aattaccacaaattttaatgggtatggacacaggtaagagtactatact 30247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 50508489 - 50508576
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||  || |||||  |||||||||||||||||||    
T  50508489 tagggatggcaattggacccagacccaatggatacccgtataaaatacccacaatagg-gggataaaatcccgctatcatgggtctggg 50508576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 13735246 - 13735360
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    |||| |||||||||||||  ||||||| |||||||| |||||| ||||||| ||||||||||||| || || | |||| |||||| |||||| | |||||    
T  13735246 gatggcaattggacccagatccaatgggtacccgcaaaaaatatccacaatgggtagggtaaaaccccacttttatggatctgggcacgggtacaggtaa 13735345  T
Q  231 tacccacaaatttaa 245  Q
    |||||||||| ||||    
T  13735346 tacccacaaaattaa 13735360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 39953004 - 39952919
Alignment:
Q  136 caattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||||| || ||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||    
T  39953004 caattgaactcaggctcaatgaatacccgcataaaatacccacaatgggtagggtaaaac-ccgatatcatgggtctgaggacgggt 39952919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 45078793 - 45078908
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| | | |||| |||||||| |||||||||||||  ||||||||||||| ||||| |||||||| |||| ||||||  ||    
T  45078793 tagggatggcaattggacccagactcgatgggtacccgcaaaaaatacccacaacgggtagggtaaaaccccgctttcatgggtatgggcacgggt-agg 45078891  T
Q  227 gtaatacccacaaattt 243  Q
     |||||||| |||||||    
T  45078892 ataatacccgcaaattt 45078908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 6409029 - 6408934
Alignment:
Q  182 aggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||||| | ||||||||||  || ||| || |||||||||||||| |||| |||| |||||||| |||||||||| ||||||    
T  6409029 aggtagggtaaaactccgcttttatgggtctggacacaggtacgagtaatacccacaaaattaaatgaatatgggcacgggtaagggtactatact 6408934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 40564392 - 40564293
Alignment:
Q  178 caataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||||||||| ||||||| ||   |||||||| |||||||||| ||||||    
T  40564392 caatgggtagggtaaaaccccgctatcatgaatctggggacgggtttgggtaatacccactaatttaaatgggtatgggcacgggtaagggtactatact 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 50809314 - 50809164
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||   |||||| |||| ||| ||||||| |||||| |||| |||||||| ||||| | ||||||||||| ||| || |||    
T  50809314 tagggatggcaattggacccagattcaatgggtacctgcaaaaaatactcacaatgggtaaggtaaaaccccgcttttatgggtctgggtacgagtacgg 50809215  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||| |||| |||| ||   |||||||| |||||| ||| ||||||    
T  50809214 ataatacccgcaaaattaaatgggtatgggcacgggtaagagtactatact 50809164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 50866548 - 50866698
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||   |||||| |||| ||| ||||||| |||||| |||| |||||||| ||||| | ||||||||||| ||| || |||    
T  50866548 tagggatggcaattggacccagattcaatgggtacctgcaaaaaatactcacaatgggtaaggtaaaaccccgcttttatgggtctgggtacgagtacgg 50866647  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     |||||||| |||| |||| ||   |||||||| |||||| ||| ||||||    
T  50866648 ataatacccgcaaaattaaatgggtatgggcacgggtaagagtactatact 50866698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 32995795 - 32995710
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||||||| ||||||||||||| ||| ||||| |||| || ||||||||| | || ||||||||||||| ||||| |||||||||    
T  32995795 gtagggatggcaattggacccagaccctatggacacccacaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtc 32995710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 35688895 - 35688791
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| | ||| ||||||||||| ||||||| ||||| ||| |||||||||| |||||||||||   | ||| |||||||| |||| | ||||||||    
T  35688895 tagggatggccattagacccaggcccgatggatatccgcaaaaattacccacaatgggtagggtaaatacctgctttcatgggtatgggcatgggtccgg 35688796  T
Q  227 gtaat 231  Q
    |||||    
T  35688795 gtaat 35688791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 46819620 - 46819504
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||||||||||| ||||    |||||||  ||||| |||||| ||||||| ||||||||||||||||||| || ||| | ||   | |||||||    
T  46819620 gtagggatgacaattggatccagatttaatggatgtccgcaaaaaatatccacaatgggtagggtaaaactccgctttcttggatatgaacatgggtccg 46819521  T
Q  226 ggtaatacccacaaatt 242  Q
    ||||||||||| |||||    
T  46819520 ggtaatacccataaatt 46819504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 14418723 - 14418641
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgg 208  Q
    |||||||| |||||||||| |||| || || | |||||||| |||||||||| ||| ||||||||||||| ||||| ||||||    
T  14418723 gtagggataacaattggactcaggtccgatcggtacccgcaaaaaatacccataatgggtagggtaaaaccccgctttcatgg 14418641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 41409846 - 41409940
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||||||||||| ||| ||  ||||  ||||||| |||||| |||||||||||||| |||||| || || |||||||| |||| ||||||    
T  41409846 agggatgacaattggactcagacctgatgggcacccgcaaaaaatatccacaataggtaggataaaaccccactttcatgggtatgggcacgggt 41409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 8340523 - 8340455
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaac 195  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||| |||| |||  |||||||||||||    
T  8340523 tagggatggcaattggacccaggcccgatgggtacccgaataaaaaacccgcaacgggtagggtaaaac 8340455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 22844798 - 22844885
Alignment:
Q  190 taaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| ||||| |||||||| |||  |||||||| ||||||||||| |||||||| || | ||| ||||  ||||||||||||||||    
T  22844798 taaaaccccgctttcatgggtttggacacgggtccaggtaatacccataaatttaaatggatatgagcacgcgtaagggtattatact 22844885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 26787125 - 26787244
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||| |  || ||||  ||||||| ||||||||| |||| |||||| |||||||||||| | |||||| ||||   |||||||    
T  26787125 gtagggatggcaattggacccggatccgatgggcacccgcaaaaaatacccgcaatgggtaggataaaactccgcttttatgggtatgggcttgggtccg 26787224  T
Q  226 ggtaa-tacccacaaattta 244  Q
    | ||| ||||| ||||||||    
T  26787225 gataattacccgcaaattta 26787244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 28956435 - 28956498
Alignment:
Q  132 atgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaac 195  Q
    |||||||||||| |||||||| ||||| ||||| | ||||||||| |||| |||||||||||||    
T  28956435 atgacaattggatccaggcccgatggacacccgtaaaaaatacccgcaatgggtagggtaaaac 28956498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 42096330 - 42096479
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| ||||||| ||| ||||  ||||||| |||||||||||||| | |||||| |||| ||||| |||||| | |||| ||||||  ||    
T  42096330 tagggatggcaatttgacccagacccgatgggcacccgcaaaaaatacccacaatggatagggt-aaaccccgctttcatggatatgggcacgggt-agg 42096427  T
Q  227 gtaa-tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||| ||||| ||||||| | || | |||| ||| |||||||||| ||||||    
T  42096428 gtaattacccgcaaattttaatggatatggacacgggtaagggtactatact 42096479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 5908791 - 5908710
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgg 208  Q
    |||||||||||||||||||||| ||  ||||  ||||||| ||||||||| | || ||||||||||||| || || ||||||    
T  5908791 tagggatgacaattggacccagaccatatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccccactttcatgg 5908710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 26291326 - 26291443
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||| ||||||| ||||| ||||||| ||||  |||  ||| ||||||||||||||||| | ||||| || ||||   |||||||     
T  26291326 tagggatgtcaattggacacaggccctatggacacccgcaaaaaaaccccgtaatgggtagggtaaaactccgttttcatgagtatgggcttgggtccga 26291425  T
Q  227 gtaa-tacccacaaattt 243  Q
    |||| ||||| |||||||    
T  26291426 gtaattaccctcaaattt 26291443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 36678654 - 36678738
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||||||||||||||||||||  || ||||  ||||| | ||||||||| | || ||||||||||||| ||||| |||| ||||    
T  36678654 tagggatgacaattggacccagatcctatgggcacccgaaaaaaatacccgctatgggtagggtaaaaccccgctttcataggtc 36678738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 19455376 - 19455271
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||  |||| |||||||| || || | || ||||| ||| ||||  |||| ||||||||||| | ||||| |||||||| |||| | |||||||    
T  19455376 gtagggatggaaattagacccaggaccgattggtatccgcaaaaattacctgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggtccg 19455277  T
Q  226 ggtaat 231  Q
    ||||||    
T  19455276 ggtaat 19455271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 38694389 - 38694473
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||||||||||||||| |||| ||| |||   ||||||| |||||| |  | || |||||| |||||||||||| |||||||||    
T  38694389 tagggatgacaattggatccagaccctatgagcacccgcaaaaaatatctgcgatgggtaggataaaactccgctttcatgggtc 38694473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 33067075 - 33067226
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||| || |||||||||||||| |||||||||||    
T  33067075 gtagggatgacaattggacccaggtccaatgaatacccgcataaaatacccataatgggtagggtaaaacccctctatcatgggtctgaggacgggtccg 33067174  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||||| || | |||||||| | |||||||| ||||||    
T  33067175 ggtaatacccacaaatttaaatggatatgggcacggataagggtactatact 33067226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 43224838 - 43224688
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||    
T  43224838 tagggatgacaattggacccagatccaatggatacctgcataaaatacccacaatgggtagggtaaaactccactatcatgggtctggagacggattcgg 43224739  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||||| || | |||||||| | |||||||| ||||||    
T  43224738 gtaatacccacgaatttaaatggatatgggcacggataagggtactatact 43224688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 43702004 - 43702154
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| |||||| |  |||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||    
T  43702004 tagggatggcaattagacccaagttcaatggatacccgcataaaatacccacaatgggtagggtaaaaccctgctatcatgggtttggggacgggtccgg 43702103  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||||| || | |||||||| ||||| |||||||||||    
T  43702104 gtaatacccacgaatttaaatggatatgggcacgggtaaaggtattatact 43702154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 277
Target Start/End: Complemental strand, 46181731 - 46181583
Alignment:
Q  129 gggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggt 228  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||||    
T  46181731 gggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggt 46181632  T
Q  229 aatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  46181631 aatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 46181583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 3551135 - 3551285
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||||||| |||| |||| ||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| ||||||| ||    
T  3551135 tagggatgacaattggacccaggcccgatgggtacctgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtctgg 3551234  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||| ||||||||| ||   |||||||| |||||||||| ||||||    
T  3551235 gtaatacccgcaaatttaaatgggtatgggcacgggtaagggtactatact 3551285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 12920592 - 12920742
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| |||||||  |||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  12920592 tagggatggcaattagacccagatccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 12920691  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| |||  |||||||| |||||||||||||||||    
T  12920692 gtaatacccacaaaattaaatgagtatgggcacgggtaagggtattatact 12920742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 16568087 - 16567937
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  16568087 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 16567988  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  16567987 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 16567937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 16597575 - 16597725
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  16597575 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 16597674  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  16597675 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 16597725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 31455412 - 31455262
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||  |||| | |||| |||||| |||||| |||    
T  31455412 tagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatgagtagggtaaaacctcgcttttatggatctgggcacgggtacgg 31455313  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  31455312 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 31455262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 42285025 - 42284875
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||| | ||||| || || ||||||| ||||||||||||||||||||| || |||||    
T  42285025 tagggatgacatttggacccaggcccaatgaatacccacataaaatagctacaatggggagagtaaaaccccgctatcatgggtctggggatggatccgg 42284926  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||| | ||   |||||||| | |||||||| ||||||    
T  42284925 gtaatacccacaaattttaatgggcatgggcacggataagggtactatact 42284875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 9478082 - 9477988
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacggg 221  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  9478082 tagggatgacaattggacccaggcccagtggatacccacataaaatatccacaatgggtagggaaaaaccccgctatcatgggtctggggacggg 9477988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 39415085 - 39414935
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||| | ||||||||| | |||||| |||    
T  39415085 tagggatggcaattagacccagacccaatggatacccgcaaaaaatacccacaatgggtagcgtaaaaccccgcttttatgggtctgagcacgggtacgg 39414986  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| ||||||| |||| ||   |||||||| |||||||||| ||||||    
T  39414985 gtaatatccacaaaattaaatgggtatgggcacgggtaagggtactatact 39414935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 35092333 - 35092483
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||| | ||||  |||||||||||| ||| |||||| ||||||| ||||||||||||| ||||| | ||||||||||| | |||| |||    
T  35092333 tagggatggcaattgaatccagatccaatggatacctgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggaaagggtacgg 35092432  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  35092433 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 35092483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 277
Target Start/End: Original strand, 5022781 - 5022933
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtcc 224  Q
    |||| ||||| ||||| |||||||   |||||| |||||  | |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |    
T  5022781 tgtaaggatggcaattagacccagattcaatgggtaccctaaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtac 5022880  T
Q  225 gggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  5022881 gggtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 5022933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 10065851 - 10065964
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||| |||   |||| |  ||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||| |||    
T  10065851 tagggatggcaattggactcagattcaataggcacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtctgggcacgggtgcgg 10065950  T
Q  227 gtaatacccacaaa 240  Q
    ||||||||||||||    
T  10065951 gtaatacccacaaa 10065964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 27399109 - 27398959
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||| | ||||||||||||   |||||||||| ||||| |||||||||||| | ||||||||||||| ||||| | ||||||||||| |||| | |||    
T  27399109 tagggacggcaattggacccatatccaatggatatccgcaaaaaatacccacagtgggtagggtaaaaccccgcttttatgggtctgggcacggatacgg 27399010  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     ||||||||| ||| |||| ||   |||||||| |||||||||| ||||||    
T  27399009 ataatacccataaaattaaatgggtatgggcacgggtaagggtactatact 27398959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 46783588 - 46783438
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||||  ||||||| || ||||| ||||||| |||||| | |||| |||||  ||||| | ||||||||||| || ||| | |    
T  46783588 tagggatgacaattggacccagatccaatgggtatccgcaaaaaatactcacaatggataggataaaatcccgcttttatgggtctgggcacaggtacag 46783489  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| ||| |||| || | |||||||| |||||||||| ||||||    
T  46783488 gtaatacccataaaattaaatggatatgggcacgggtaagggtactatact 46783438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 17171800 - 17171896
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  17171800 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 17171896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 40787892 - 40787975
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggt 210  Q
    |||||||||||||||||| ||| ||| ||||  ||||||| |||||||||||||| ||||||||||||| ||||| ||||||||    
T  40787892 tagggatgacaattggactcagacccgatgggcacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatgggt 40787975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 19805543 - 19805428
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| ||||||||||||   ||||||| |||||||| |||||| ||||||| | ||||||||||  ||||| | |||| |||||| |||||| ||||||    
T  19805543 ggatggcaattggacccaaatccaatgggtacccgcaaaaaatatccacaatggatagggtaaaatcccgcttttatggatctgggcacgggtacgggta 19805444  T
Q  230 atacccacaaatttaa 245  Q
    ||| ||||||| ||||    
T  19805443 atatccacaaaattaa 19805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 25047473 - 25047391
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgg 208  Q
    ||||||||||| ||| || |||||||||||||  ||||||| ||||||||  |||| ||||||||||||||||||| ||||||    
T  25047473 gtagggatgacgattagatccaggcccaatgggcacccgcaaaaaatacctgcaatgggtagggtaaaactccgctttcatgg 25047391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 25309112 - 25309229
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||||||||| || | |||| || ||| | |||||||||||||| ||||| ||||||| ||||| |||||||| ||||   ||||| |||    
T  25309112 agggatggcaattggacccaagctcgatgggtatccgtaaaaaatacccacaatgggtagagtaaaaccccgctttcatgggtatgggtttgggtctggg 25309211  T
Q  228 taatacccacaaatttaa 245  Q
    || ||||| |||||||||    
T  25309212 tattacccgcaaatttaa 25309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 44301245 - 44301157
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||| ||||||||||||| ||| ||||  ||| ||| |||||||||||||| ||||||||||||| || || |||||||| ||||    
T  44301245 tagggatggcaattggacccagacccgatgggcacctgcaaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatggg 44301157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 45116385 - 45116281
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||| ||||||||||  ||||  ||||| | ||||||||| |||| | ||||||||||| ||||| |||||| | |||| | ||||||||    
T  45116385 tagggatgacaattagacccaggcctgatgggcacccgtaaaaaatacccgcaatggatagggtaaaaccccgctttcatggatatgggtatgggtccgg 45116286  T
Q  227 gtaat 231  Q
    |||||    
T  45116285 gtaat 45116281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 28066812 - 28066897
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||||||||| |||||||| ||| ||||  ||||||| ||||||||| | || ||||||||||||| ||||| |||| ||||    
T  28066812 gtagggatgacaataggacccagaccctatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccccgctttcataggtc 28066897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 36073633 - 36073706
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgc 200  Q
    |||||||| |||||  ||||||| || ||||| ||||||| |||||||||||||| ||||||||||||| ||||    
T  36073633 tagggatggcaattatacccaggtccgatggacacccgcaaaaaatacccacaatgggtagggtaaaaccccgc 36073706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 277
Target Start/End: Complemental strand, 3363449 - 3363331
Alignment:
Q  159 tacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggca 258  Q
    |||||||| ||||||  |||||| | ||||||||||||||||| | ||| ||||||| ||| || || |||| ||||| ||| |||| ||   |||||||    
T  3363449 tacccgcaaaaaatattcacaatggatagggtaaaactccgcttttatgagtctgggcacgagtacgagtaacacccaaaaaattaaatgggtatgggca 3363350  T
Q  259 caggtaagggtattatact 277  Q
    | |||||||||| ||||||    
T  3363349 cgggtaagggtactatact 3363331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 12499151 - 12499236
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||| ||||||||||||| ||| ||||| ||| ||| ||||||||| | || |||| |||||||  ||||| |||||||||||||    
T  12499151 ggatggcaattggacccagaccctatggacacctgcaaaaaatacccgctatgggtatggtaaaatcccgctttcatgggtctggg 12499236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 26299953 - 26299870
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggt 210  Q
    |||||||| |||||||||||||  || ||||||||| ||| ||||||||| | || |||||| |||||| || || ||||||||    
T  26299953 tagggatggcaattggacccagatcctatggatacctgcaaaaaatacccgctatgggtaggataaaaccccactttcatgggt 26299870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 7378165 - 7378099
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaa 193  Q
    |||||||| ||||||||| |||||||  |||| |||| || ||||||||  ||||||||||||||||    
T  7378165 tagggatggcaattggactcaggcccgttggacacccacaaaaaatacctgcaataggtagggtaaa 7378099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 36073241 - 36073120
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtcc 224  Q
    |||||||||| ||||| |||||||| |  ||||  | ||||| |||||||||  ||| ||||||||||||| ||||| |||||| | |||| | || | |    
T  36073241 tgtagggatggcaattagacccaggtctgatgggcatccgcaaaaaatacccgtaatgggtagggtaaaaccccgctttcatggatatgggcatggattc 36073142  T
Q  225 gggtaa-tacccacaaatttaa 245  Q
    |||||| ||||| |||||||||    
T  36073141 gggtaattacccgcaaatttaa 36073120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 31330698 - 31330782
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||| || ||||||||| ||||  | ||||| ||||||| |||||| || | |||||||||||||||| || |||||| |||||    
T  31330698 taggggtggcaattggacacaggttcgatggacacccgcaaaaaatatccgcgataggtagggtaaaaccccactatcacgggtc 31330782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 40341797 - 40341901
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| ||||||||||| || | || ||| | ||| ||| | |||| ||||||||||| |||| || |||||||| |||| |  |||||||    
T  40341797 tagggatggcaattagacccaggcccgatcggtatccgtaaaaattacacgcaatgggtagggtaaatctccactttcatgggtatgggcataggtccgg 40341896  T
Q  227 gtaat 231  Q
    |||||    
T  40341897 gtaat 40341901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 34459218 - 34459368
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  34459218 tagggatggcaattggacccaggtccaatggatacccgcataaaatacccacaattggtagggtaaaacaccgctatcatgggtatggggacgggtccgg 34459317  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||||| | ||   |||||||| |||||||||| ||||||    
T  34459318 gtaatacccacgaattttaatgggtatgggcacgggtaagggtactatact 34459368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 277
Target Start/End: Complemental strand, 33983657 - 33983510
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  33983657 ggatggcaattggacccaggcccaatggatacccgcataaaatacctacaatgggtaggataaaactccgctatcatggatctagggacgggtccgggta 33983558  T
Q  230 atacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||| ||   ||| |||| |||||||||| ||||||    
T  33983557 atacccacaaatttaaatgggtatgagcacgggtaagggtactatact 33983510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 29148603 - 29148753
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  29148603 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 29148702  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  29148703 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 29148753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 42052853 - 42053004
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| ||    
T  42052853 gtagggatggcaattgaacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacg 42052952  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  42052953 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 42053004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 1730639 - 1730788
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||| || ||||| ||||||||| || ||||||||||||||||| ||||||||||||| |||||||||||| ||| | ||||||| |||    
T  1730639 tagggatgacaattgcactcaggctcaatggatatccacataaaatacccacaatgggtagggtaaaaccccgctatcatggatct-gagacgggttcgg 1730737  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||    
T  1730738 gtaatacccacgaatttaattggagatgggtacaggtaagagtactatact 1730788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 52180361 - 52180511
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| | |||| |||    
T  52180361 tagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcatgggtacgg 52180460  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  52180461 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 52180511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 28928206 - 28928357
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||| | || ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||| ||||||| | ||||    
T  28928206 gtagggatggcaattgggcacatgcccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctattatgggtttggggacagatccg 28928305  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| ||||||| ||   |||||||| |||||||||| ||||||    
T  28928306 ggtaatacccacgaatttaaatgggtatgggcacgggtaagggtactatact 28928357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 652758 - 652608
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||| || || | ||||||||||| || ||| |||    
T  652758 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgtgtagggtaaaacccctcttttatgggtctgggcacaggtacgg 652659  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||||||||||    
T  652658 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtattatact 652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 32655106 - 32655256
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||| ||||| | |||| |||||| |||||| |||    
T  32655106 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatggatagggtaaaaccccgcttttatggatctgggcacgggtacgg 32655205  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  32655206 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 32655256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 42755864 - 42755714
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| |||||||  |||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  42755864 tagggatggcaattagacccagatccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 42755765  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||||||||||    
T  42755764 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtattatact 42755714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 2073220 - 2073363
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||     ||||||||| |||||||||||||||| |||| |||||||||    
T  2073220 agggatggcaattggacc-aggcccaatggatacgcgcataaaatacctacaat-----gggtaaaaccccgctatcatgggtctagggaggggtccggg 2073313  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||| ||   |||||||| |||||||||| ||||||    
T  2073314 taatacccacaaatttaaatgggtatgggcacgggtaagggtactatact 2073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 7250189 - 7250335
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    ||||||||||||||||||||| |||||||||   ||||||||| | ||||| ||||||||||||  ||||||| ||||||||||||| ||||||||||||    
T  7250189 gatgacaattggacccaggcctaatggatacttacataaaatatctacaatgggtagggtaaaatcccgctataatgggtctggggaagggtccgggtaa 7250288  T
Q  231 tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    || |||||||||||| ||   |||||||| ||||| |||| ||||||    
T  7250289 tatccacaaatttaaatgggtatgggcacgggtaaaggtactatact 7250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 25938880 - 25938730
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||   ||||||||||||  | |||||||||||||| ||||||||||||||||||| | ||||||||||  |||||| |||    
T  25938880 tagggatggcaattggacccagattcaatggatacccataaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacacgggtacgg 25938781  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  25938780 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 25938730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 38444399 - 38444250
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||| |||| ||||||||||||||||||||||  |||||||| ||| ||| ||||||||||||| || |||||||  ||||||||| |||||||    
T  38444399 gtagggatgataatttgacccaggcccaatggataccc--ataaaatatccataatgggtagggtaaaaccccactatcataagtctggggaagggtccg 38444302  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||| ||||||| ||   ||||| || |||||||||| ||||||    
T  38444301 ggtaatacccacgaatttaaatgggtatgggtacgggtaagggtactatact 38444250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 3094564 - 3094714
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||| |||||| |||||||| |||||||| |||||||||||||| || |||||||||| ||||| | ||||||||||| ||| || ||     
T  3094564 tagggatggcaattgaacccagacccaatgggtacccgcaaaaaatacccacaatgggaagggtaaaaccccgcttttatgggtctgggcacgagtacga 3094663  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  3094664 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 3094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 21076346 - 21076209
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| ||||||||||||| |||||||| |||||||| |||||| ||||||| | ||||||||||| ||||| | ||||||||||| |||||| ||||||    
T  21076346 ggatggcaattggacccagacccaatgggtacccgcaaaaaatatccacaatggatagggtaaaaccccgcttttatgggtctgggcacgggtacgggta 21076247  T
Q  230 atacccacaaatttaattgaagatgggcacaggtaagg 267  Q
    ||||||||||| |||| ||   |||||||| |||||||    
T  21076246 atacccacaaaattaaatgggtatgggcacgggtaagg 21076209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 52596067 - 52595918
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||||||||||  |||||||||||||||| ||||||| |||||||| ||||||||||| ||||| | || | |||||| |||||| ||||    
T  52596067 agggatggcaattggacccagatccaatggatacccgcaaaaaatactcacaatagatagggtaaaaccccgcttttatagatctgggcacgggtacggg 52595968  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||| | || ||   |||||||| |||||||||| ||||||    
T  52595967 taatacccacaaaataaaatgggtatgggcacgggtaagggtactatact 52595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 22312955 - 22313043
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  22312955 tagggatgataattggatccaggcctaatggatacccgcataaaatatccacaatgggtagggtaaaattccgctatcatgggtctggg 22313043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 277
Target Start/End: Complemental strand, 23147925 - 23147778
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| ||||||||||||  ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||| | |||| ||| || |||||| ||||||    
T  23147925 ggatggcaattggacccaaacccaatggatacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctaggcacgggtacgggta 23147826  T
Q  230 atacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| |||| ||   |||||||| ||||| |||| ||||||    
T  23147825 atacccacaaaattaaatgggtatgggcacgggtaaaggtactatact 23147778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 38001120 - 38000969
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||| |||||||| ||| |||| |||||||| | ||| ||||||||||||| ||| | | |||||| |||| |||||| ||    
T  38001120 gtagggatggcaattggacccagacccaatgggtactcgcaaaaaatacctataatgggtagggtaaaaccccgtttttatgggtatgggcacgggtacg 38001021  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| || | ||||||||  ||||||||| ||||||    
T  38001020 ggtaatacccacaaaattaaatggatatgggcacgagtaagggtactatact 38000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 12186296 - 12186148
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||||||||| || |||||| ||||||| ||||||||||||  ||||| | |||| |||||  |||||| |||    
T  12186296 tagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacacgggtacgg 12186197  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||    
T  12186196 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactata 12186148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 23349102 - 23349208
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtcc 224  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||| | ||  ||| ||||||||||||||||||| || ||||| |||| | ||||||    
T  23349102 tgtagggatgacaattggacccaggcccgatagatacccacataaaaaatccgtaatgggtagggtaaaactccgctttcgtgggtatgggcatgggtcc 23349201  T
Q  225 gggtaat 231  Q
    |||||||    
T  23349202 gggtaat 23349208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 41003842 - 41003696
Alignment:
Q  132 atgacaattggacccaggcccaatggatacccgcataaaa-tacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    ||||||||||||||||| || |||||||||| ||| |||| |||| ||||| |||| |||||||| ||||| | ||||||||||| ||| || || ||||    
T  41003842 atgacaattggacccagacctaatggatacctgcaaaaaaatacctacaatgggtatggtaaaaccccgcttttatgggtctgggcacgagtacgagtaa 41003743  T
Q  231 tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| |||| ||   |||| ||| |||||||||||||||||    
T  41003742 tacccacaaaattaaatgggtatggacacgggtaagggtattatact 41003696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 54978777 - 54978894
Alignment:
Q  159 tacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggca 258  Q
    |||||||| |||||||||||||| |||||| |||||| ||||| | ||||||||||| || ||| ||||||||||||||||| |||| ||   |||||||    
T  54978777 tacccgcaaaaaatacccacaatgggtagg-taaaaccccgcttttatgggtctgggcacaggtacgggtaatacccacaaaattaaatgggtatgggca 54978875  T
Q  259 caggtaagggtattatact 277  Q
    | |||||||||||||||||    
T  54978876 cgggtaagggtattatact 54978894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 8066480 - 8066333
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||| ||||  | ||||| |||||||| |||||||||||||| | ||||||||||  ||||| | ||||||||| | |||||| |||    
T  8066480 tagggatgacaattggatccagatctaatgggtacccgcaaaaaatacccacaatggatagggtaaaatcccgct-ttatgggtctgagcacgggtacgg 8066382  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    ||||||||||||||  ||| ||   |||||||| |||||||||| ||||    
T  8066381 gtaatacccacaaaactaaatgggtatgggcacgggtaagggtactata 8066333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 45098097 - 45098022
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgct 201  Q
    ||||||||||||||||||||||| ||  ||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  45098097 gtagggatgacaattggacccagacctgatggacacctgcaaaaaatacccacaataggtagggtaaaactccgct 45098022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 53141146 - 53141051
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  53141146 tagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 53141051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 1757622 - 1757733
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||| ||| |||||||||| ||| ||||||||||||| ||||| |||||    |||  ||| ||||||    
T  1757622 tagggatggcaattggacccagacccaatggatacctgcaaaaaatacccataatgggtagggtaaaaccccgctttcatg----tggacacgagtccgg 1757717  T
Q  227 gtaatacccacaaatt 242  Q
     |||||||||||||||    
T  1757718 ataatacccacaaatt 1757733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 14577311 - 14577161
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||||||||| || |||||| ||||||| | ||||||||||  ||||| |  ||| |||||  |||||| |||    
T  14577311 tagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgg 14577212  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  14577211 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactatact 14577161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 54932332 - 54932470
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||| ||| | || |||||||| ||||| |||||| |||||  ||||| | ||||||||||| || ||| |||    
T  54932332 tagggatggcaattggacccagatccaatgggtacactcaaaaaatacctacaatgggtaggataaaatcccgcttttatgggtctgggcactggtacgg 54932431  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaa 265  Q
    |||||||||||||| |||| || | |||||||| |||||    
T  54932432 gtaatacccacaaaattaaatggacatgggcacgggtaa 54932470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 3386811 - 3386896
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggt 210  Q
    |||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||    
T  3386811 tgtagggatggcaattggacacaaacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggt 3386896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 2720822 - 2720970
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||||||||| || |||||| ||||||| ||||||||||||  ||||| | |||| |||||    |||| |||    
T  2720822 tagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacttgggtacgg 2720921  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||    
T  2720922 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactata 2720970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 13082680 - 13082592
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||| |||  |||| ||||||||||||| ||||| | |||||||||||    
T  13082680 tagggatgacaattgaacccaggcccgatggatacccgcaaaaaaaacctgcaatgggtagggtaaaaccccgcttttatgggtctggg 13082592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 52801798 - 52801894
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| | |||| ||||||    
T  52801798 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatatgggcacgggt 52801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 275
Target Start/End: Complemental strand, 21246352 - 21246214
Alignment:
Q  136 caattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaataccc 235  Q
    |||||||||||||| ||||||| |||||| | |||||||||||||| ||||||||||||  ||||| | |||||| |||  |||||| ||| ||||||||    
T  21246352 caattggacccaggtccaatgggtacccgaa-aaaatacccacaatgggtagggtaaaatcccgcttttatgggtatggacacgggtacggataataccc 21246254  T
Q  236 acaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    ||| | |||| || | || ||||| |||||||||| ||||    
T  21246253 acagaattaaatggatattggcacgggtaagggtactata 21246214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 12188290 - 12188142
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||| | |||||||||||||  ||||||||||||| || |||||| ||||||| ||||||||||||  ||||| | |||| |||||    |||| |||    
T  12188290 tagggacggcaattggacccagatccaatggatacccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacttgggtacgg 12188191  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattata 275  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||    
T  12188190 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactata 12188142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 46030724 - 46030611
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||   ||||||||||||||  |||| ||||||||||| ||  ||||||||||||| | |||| | |||| ||||||||      
T  46030724 tagggatggcaattggacccagattcaatggatacccgctaaaaaaacccacaatagataatgtaaaactccgcttttatggatatgggtacgggtcc-- 46030627  T
Q  227 gtaatacccacaaatt 242  Q
    ||||||||||||||||    
T  46030626 gtaatacccacaaatt 46030611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 29405455 - 29405549
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||| ||||||||||||| ||  ||||  ||||||| |||||||||| ||| |||||| |||||||||||| |||||||| |||| ||||||    
T  29405455 agggatggcaattggacccagacctgatgggcacccgcaaaaaatacccataattggtaggataaaactccgctttcatgggtatgggcacgggt 29405549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 22830374 - 22830270
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||| |||||||| || |||| || ||| | ||| ||||| |||| ||||||||||| | |||||||||||||| |||| | ||||||||    
T  22830374 tagggatggcaattagacccaggtccgatgggtatccgtaaaaattacccgcaatgggtagggtaaatccccgctatcatgggtatgggcatgggtccgg 22830275  T
Q  227 gtaat 231  Q
    |||||    
T  22830274 gtaat 22830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 46081254 - 46081103
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    |||||||||||||||||||||||   | |||   | ||||| |||||| ||||||| ||||||||||||| ||||| |||||||| |||| ||||||  |    
T  46081254 gtagggatgacaattggacccagattcgatgagcatccgcaaaaaatatccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggt-ag 46081156  T
Q  226 ggtaa-tacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||| ||| | ||||||| | || | |||| ||| |||||||||||||||||    
T  46081155 ggtaattacgcgcaaattttaatggatatggacacgggtaagggtattatact 46081103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 39804833 - 39804743
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||| | || |||||| ||||||  |||| | |||||||||||    
T  39804833 tgtagggatgacaattggacccagaccctatgggcacccgcaaaaaatacccgctatgggtaggataaaacctcgcttttatgggtctggg 39804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 22306277 - 22306365
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||||||||| ||||||||||| |||| || ||||| ||| ||||  |||| ||||||||||| | ||||| |||||||| ||||    
T  22306277 tagggatgacaattagacccaggcccgatgggtatccgcaaaaattacctgcaatgggtagggtaaatccccgctttcatgggtatggg 22306365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 26337198 - 26337282
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||| ||| ||||  ||||||| ||||||||| | || ||||||||||||| | ||| |||||||||    
T  26337198 tagggatggcaattggacccagaccctatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccctgctttcatgggtc 26337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 46257733 - 46257846
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||   ||||||||||| ||  |||| | | ||||| | ||| ||||||||| ||| |||||||| |||| ||||||||      
T  46257733 tagggatggcaattggacccagattcaatggatacctgctaaaaaaatctacaatggatagtgtaaaactctgctttcatgggtatgggcacgggtcc-- 46257830  T
Q  227 gtaatacccacaaatt 242  Q
    ||||||||||||||||    
T  46257831 gtaatacccacaaatt 46257846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 22248392 - 22248303
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgg 220  Q
    ||||| ||||||||||||| ||| ||||  ||||||| |||||||||||||| ||||| ||||||| ||||| ||||| || |||| ||||    
T  22248392 ggatggcaattggacccagacccgatgggcacccgca-aaaatacccacaatgggtagagtaaaaccccgctttcatgagtatgggtacgg 22248303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 8589414 - 8589493
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcat 206  Q
    ||||| || ||||| ||||||||| | ||||| ||||||| |||||| || |||| ||||||||||||| ||||| ||||    
T  8589414 taggggtggcaattagacccaggctcgatggacacccgcaaaaaatagccgcaatgggtagggtaaaaccccgctttcat 8589493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 2224548 - 2224638
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||||||||  ||||| ||||||  ||||||| ||| |||| |||||| ||||||| | ||||||||||| || || | |||||||||||    
T  2224548 tgtagggatggtaattgaacccagatccaatgggtactcgcaaaaaatatccacaatggatagggtaaaacccctcttttatgggtctggg 2224638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 19444344 - 19444394
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaataccca 177  Q
    |||||||||||||||||||||  |||| |||| ||||||| ||||||||||    
T  19444344 tagggatgacaattggacccaaacccagtggacacccgcaaaaaataccca 19444394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 27586168 - 27586274
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| |||||||||| || ||| |||| ||  || |||||||||| | |||| |||| ||||||||||| | ||||| || ||||  ||||| ||||||    
T  27586168 ggatggcaattggacctagacccgatgggtattcgtataaaataccaataataagtagagtaaaactccgttttcatgagtttgggcgcgggttcgggta 27586267  T
Q  230 ataccca 236  Q
    |||||||    
T  27586268 ataccca 27586274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 31713140 - 31713245
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||| ||||||||| | ||||  | ||||| ||| ||| | |||| ||||||||||| | ||||| |||||||| |||| | |||||||    
T  31713140 gtagggatggcaattagacccaggctcgatgggcatccgcaaaaattactcgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggtccg 31713239  T
Q  226 ggtaat 231  Q
     |||||    
T  31713240 agtaat 31713245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 33733910 - 33733842
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaac 195  Q
    |||| ||| |||||||||| || | | ||||||||||||| ||||||  |||||| |||||||||||||    
T  33733910 taggaatggcaattggacctagactcgatggatacccgcaaaaaatattcacaatgggtagggtaaaac 33733842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 56444740 - 56444772
Alignment:
Q  183 ggtagggtaaaactccgctatcatgggtctggg 215  Q
    ||||||||||||||||||| |||||||||||||    
T  56444740 ggtagggtaaaactccgctttcatgggtctggg 56444772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 667576 - 667726
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  667576 tagggatggcaattggactcaggcccaatggatactcgcataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 667675  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||| |||| ||||||| ||   |||||||| |||||||||| ||||||    
T  667676 gtaatatccacgaatttaaatgggtatgggcacgggtaagggtactatact 667726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 4481567 - 4481417
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  4481567 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 4481468  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  4481467 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 4481417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 33867139 - 33867289
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  33867139 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 33867238  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  33867239 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 33867289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 25425267 - 25425117
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | |||| |||||| |||||| |||    
T  25425267 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 25425168  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  25425167 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 25425117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 15149826 - 15149933
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||| |||||||| |||| |||||||||||| |||||||||||||||||    
T  15149826 tagggatgacaattggactcagacccaatggatacccgcataaaatatccataatgggtagggtgaaaccccgctatcatggatctggggacgggtccgg 15149925  T
Q  227 gtaatacc 234  Q
    ||||||||    
T  15149926 gtaatacc 15149933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 29155830 - 29155681
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| ||||| ||||||| ||| |||| | |||||| ||||||||||  |||||||||||||||| ||||| |||||||| |||| |||||||||||    
T  29155830 agggatggcaattagacccagacccgatgggtgcccgcaaaaaatacccatgataggtagggtaaaaccccgctttcatgggtttgggcacgggtccggg 29155731  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||||||| ||   |||||||| |||||||||| ||||||    
T  29155730 taatacccacaaatttaaatgggtatgggcacgggtaagggtactatact 29155681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 3329675 - 3329524
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||| |||||| || ||||| |||||||| |||||| ||||||| ||||||||||||  ||| | | ||||||||||| |||||| ||    
T  3329675 gtagggatggcaattgaacccagacctaatgggtacccgcaaaaaatatccacaatgggtagggtaaaatcccgtttttatgggtctgggcacgggtacg 3329576  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   |||||||| |||||||||||||||||    
T  3329575 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtattatact 3329524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 38620902 - 38620752
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  |||||||||| ||||| |||||| ||| ||| ||||||||||||| ||||| | ||||||||||  |||||| |||    
T  38620902 tagggatggcaattggacccagatccaatggatatccgcaaaaaatatccataatgggtagggtaaaacaccgcttttatgggtctggacacgggtacgg 38620803  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
     ||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  38620802 ataatacccacaaaattaaatggatatgggcacgggtaagggtactatact 38620752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 31440239 - 31440388
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccggg 227  Q
    ||||||| |||||||||| || || |||| ||||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||||  | |||| ||||    
T  31440239 agggatggcaattggacctagaccaaatgaatacctgcaaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacatgggtacggg 31440338  T
Q  228 taatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  31440339 taatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 31440388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 23232247 - 23232096
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||||||||| ||||| | |||| | |||  | |||| ||    
T  23232247 gtagggatggcaattggacccagacccaatggatacccgcaacaaatatccacaatgggtagggtaaaaccccgcttttatggttttggacatgggtacg 23232148  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| || | ||| |||| |||||||||| ||||||    
T  23232147 ggtaatacccacaaaattaaatggatatgagcacgggtaagggtactatact 23232096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 13142173 - 13142323
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| | |||| ||||||| || |||||||||||||| |||||| |||||| ||||| | ||||||||||| |||||| | |    
T  13142173 tagggatggcaattggacccagactcaatagatacccacaaaaaatacccacaatgggtaggataaaaccccgcttttatgggtctgggcacgggtacag 13142272  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  13142273 gtaatacccacaaaattaaatgggcaagggcacgggtaagggtactatact 13142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 276
Target Start/End: Complemental strand, 20937569 - 20937420
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||| |  |||||| || ||||| |||||| ||||||| |||| |||||||| ||||| ||||||||||||  |||||||||     
T  20937569 tagggatggcaattggacccacgttcaatgggtatccgcaaaaaatatccacaatgggtaaggtaaaaccccgctttcatgggtctggacacgggtccga 20937470  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatac 276  Q
    ||||||||||||||||| | ||   |||  |||||||||||||| |||||    
T  20937469 gtaatacccacaaattttaatgggtatgaacacaggtaagggtactatac 20937420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 17961056 - 17961206
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||  ||||||||||||| | ||||||||| ||||| |||||||||| ||||||||||||||||| ||||| | ||||||||| | |||| | ||     
T  17961056 tagggattgcaattggacccagactcaatggatatccgcaaaaaatacccataataggtagggtaaaaccccgcttttatgggtctgagcacggatacgc 17961155  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| ||| |||| ||   | |||||| |||||||||| ||||||    
T  17961156 gtaatacccataaaattaaatgggtacgggcacgggtaagggtactatact 17961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 4290161 - 4290065
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  4290161 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 4290065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 4591796 - 4591911
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||||||| |||| |||| |||| | | |||||||||||||||||||  ||||||||| ||| | ||||||||||| ||| || |      
T  4591796 tagggatgacaattggacccaagcccgatgggtacctgtaaaaaatacccacaataggta-cgtaaaactctgcttttatgggtctgggcacgagtacat 4591894  T
Q  227 gtaatacccacaaattt 243  Q
    |||||||||||||||||    
T  4591895 gtaatacccacaaattt 4591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 10391228 - 10391323
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    |||| ||| |||||||||||||  || ||||| || |||| |||||||||||||||||||  ||||||||||||| |||||||| |||| ||||||    
T  10391228 taggcatggcaattggacccagatcctatggacactcgcaaaaaatacccacaataggtaacgtaaaactccgctttcatgggtatgggcacgggt 10391323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 8027051 - 8027135
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| |||||||||||||  || ||||| |||| || ||||||||| | || ||||||||||||||||||| |||||||||    
T  8027051 tagggatggcaattggacccagatcctatggacacccacaaaaaatacccgctatgggtagggtaaaactccgctttcatgggtc 8027135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 30241930 - 30241838
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||| ||||||||||||| | |||||| |||||||| |||||| ||||||| | ||||||||||| ||||| | |||||| |||| ||||||    
T  30241930 ggatggcaattggacccagactcaatgggtacccgcaaaaaatagccacaatggatagggtaaaaccccgcttttatgggtttgggtacgggt 30241838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 17249347 - 17249281
Alignment:
Q  128 agggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa 194  Q
    |||||||||||||| ||||| | ||||||| |||||||| |||||||||||||| |||||| |||||    
T  17249347 agggatgacaattgaacccaagtccaatgggtacccgcaaaaaatacccacaatgggtaggataaaa 17249281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 15162505 - 15162436
Alignment:
Q  125 tgtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa 194  Q
    ||||||||||||||||||||||||  || ||||| ||||||| ||||||||| | || ||||||||||||    
T  15162505 tgtagggatgacaattggacccagatcctatggacacccgcaaaaaatacccgctatgggtagggtaaaa 15162436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 18975324 - 18975224
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaa 230  Q
    |||| ||||| ||||| ||||||||||||| ||||| ||| ||||| |||| ||||||||||| | ||||| |||||||| |||  | |||||||| |||    
T  18975324 gatggcaattagaccctggcccaatggatatccgcaaaaattacccgcaatgggtagggtaaatccccgctttcatgggtatggacatgggtccggataa 18975225  T
Q  231 t 231  Q
    |    
T  18975224 t 18975224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 32422414 - 32422486
Alignment:
Q  205 atgggtctggggacgggtccgggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| |||||| ||||||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  32422414 atgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 32422486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 9205644 - 9205570
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgct 201  Q
    |||||||| ||||||| | |||  ||||||| || | ||| |||||||||||||||||||||||||||| |||||    
T  9205644 tagggatggcaattgggctcagatccaatgggtatctgcaaaaaatacccacaataggtagggtaaaaccccgct 9205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 41935054 - 41935135
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgg 208  Q
    |||||||||||||| ||||||||||  ||||  ||||||| ||||||||  |||| |||||||||| || ||||| ||||||    
T  41935054 tagggatgacaattagacccaggcctgatgggcacccgcaaaaaatacctgcaatgggtagggtaagaccccgctttcatgg 41935135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 12345095 - 12345179
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| ||||||||||||  | | ||||  ||||||| ||||||||| | || ||||||||||||| ||||| |||||||||    
T  12345095 tagggatggcaattggacccaaactctatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtc 12345179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 29545575 - 29545663
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||| ||||| ||||||||||| |||| || ||||| ||| ||||| |||| ||||||||||| | || || |||||||| ||||    
T  29545575 tagggatggcaattagacccaggcccgatgggtatccgcaaaaattacccgcaatgggtagggtaaatccccactttcatgggtatggg 29545663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 7819869 - 7819819
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaataccca 177  Q
    ||||||||||||||||||||| | |||||||  ||||||| ||||||||||    
T  7819869 tagggatgacaattggacccaagtccaatgggcacccgcaaaaaataccca 7819819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 42970792 - 42970712
Alignment:
Q  131 gatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    ||||||||||||||||||  || ||||  || |||| ||||||||| | || ||||||||||||| | ||| |||||||||    
T  42970792 gatgacaattggacccagatcctatgggcactcgcaaaaaatacccgctatgggtagggtaaaaccctgctttcatgggtc 42970712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 44070050 - 44070114
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaa 194  Q
    ||||| ||||||||||||| | |||||| |||||||| ||||||  || ||| ||||||||||||    
T  44070050 ggatggcaattggacccagacacaatgggtacccgcaaaaaatattcataatgggtagggtaaaa 44070114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 13532529 - 13532680
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| | || |||||||| |||||| ||    
T  13532529 gtagggatgacaattagacccagacccaatggatacccgcaaaaaatacccacaattggtagggtaaaaccccgcttttataggtctgggcacgggtacg 13532628  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    | ||||| ||||||| |||| || | |||||||| |||||||||| ||||||    
T  13532629 gataatatccacaaaattaaatggatatgggcacgggtaagggtactatact 13532680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 33329110 - 33328959
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||| ||||| | ||||||||||| |||||| ||    
T  33329110 gtagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacg 33329011  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||| ||| |||| ||   |||||||| |||||||||| ||||||    
T  33329010 ggtaatacccaaaaaattaaatgggtatgggcacgggtaagggtactatact 33328959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 33332121 - 33331971
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||| ||||| | ||||||||||| |||||| |||    
T  33332121 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 33332022  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| ||| |||| ||   |||||||| |||||||||| ||||||    
T  33332021 gtaatacccaaaaaattaaatgggtatgggcacgggtaagggtactatact 33331971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 277
Target Start/End: Complemental strand, 7808277 - 7808126
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||| |  ||||| |||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||| ||||||| ||    
T  7808277 gtagggatggcaattggacccatgttcaatgaatacccgcataaaatatccacaatgggtagggtaaaatcccgctatcatgggtctggagacgggttcg 7808178  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    | |||||||||| ||||||| ||   |||||||| |||||||||| ||||||    
T  7808177 gataatacccacgaatttaaatgggtatgggcacgggtaagggtactatact 7808126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 31071302 - 31071152
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||  |||||||| |||||||| |||||||||||||| ||||||||||||| ||||| |  |||||||||| |||||| |||    
T  31071302 tagggatggcaattggacccaaacccaatgggtacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttgtgggtctgggcacgggtacgg 31071203  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  31071202 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 31071152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 6337706 - 6337556
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| ||||||||||||| ||||| |||||||| |||  | ||||| ||    
T  6337706 tagggatgacaattggatccagacccaatggatacccgcaaaaaaaacccacaatgggtagggtaaaaccccgctttcatgggtatggacatgggtctgg 6337607  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||||    ||   |||||||| |||||||||||||||||    
T  6337606 gtaatacccacaaattgttatgggtatgggcacgggtaagggtattatact 6337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 1329158 - 1329308
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||| |||||  | ||||||||||||||| |||||||||||||| ||||||||||||| || || | ||||||||||  |||||| |||    
T  1329158 tagggatggcaattgaacccatactcaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccacttttatgggtctggacacgggtacgg 1329257  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||| ||| |||| ||   |||||||| |||||||||| ||||||    
T  1329258 gtaatacccataaaattaaatgggtatgggcacgggtaagggtactatact 1329308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 31783600 - 31783749
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    ||||||||||||||||| ||||  ||||||| ||| |||| ||||||||||||||  |||||||||||| ||||| | ||||||||||| | |||| |||    
T  31783600 tagggatgacaattggatccagatccaatgggtactcgca-aaaatacccacaattagtagggtaaaaccccgcttttatgggtctgggcatgggtacgg 31783698  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  31783699 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 31783749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 6938535 - 6938426
Alignment:
Q  136 caattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggtaataccc 235  Q
    |||||||||| ||| | |||||||||||||||||| || ||| ||| |||||| |||||| ||||||| |||||||||||||||||||| | ||||||||    
T  6938535 caattggacctaggtctaatggatacccgcataaattatccataatgggtaggataaaaccccgctataatgggtctggggacgggtccagataataccc 6938436  T
Q  236 acaaatttaa 245  Q
    || |||||||    
T  6938435 acgaatttaa 6938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 29640361 - 29640502
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| |||||||| |||| |||||||| |||||||| |||||| ||||||| ||||||||||||| ||||| | || |||||| | |||||| ||| ||    
T  29640361 ggatggcaattggatccagacccaatgggtacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttataggtctgagcacgggtacggata 29640460  T
Q  230 atacccac-aaatttaattgaagatgggcacaggtaagggta 270  Q
    |||||||| |||||||| ||   |||||||| ||||||||||    
T  29640461 atacccacaaaatttaaatgggtatgggcacgggtaagggta 29640502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 1221294 - 1221390
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  1221294 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 1221390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 24446701 - 24446797
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  24446701 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 24446797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 28770303 - 28770187
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| ||||||||||||  ||||||| ||||||||| |||||| ||||||| |||| |||||||  ||||| |||| ||| |||  || |||||||    
T  28770303 tagggatggcaattggacccaaacccaatgaatacccgcaaaaaatatccacaatgggtatggtaaaatcccgctttcataggtatggacacaggtccgg 28770204  T
Q  227 gtaatacccacaaattt 243  Q
    |||||||||||||||||    
T  28770203 gtaatacccacaaattt 28770187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 20691177 - 20691327
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||||||||| |||  |||||||  | || || |||||||||||||| ||||||||||||| | ||| | ||||||||||| |||||| |||    
T  20691177 tagggatgacaattggactcagatccaatgggcatccacaaaaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggcacgggtgcgg 20691276  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||  |||||| | || ||   |||||||| |||||||||| ||||||    
T  20691277 gtaataaacacaaaataaaatgggtatgggcacgggtaagggtactatact 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 31510531 - 31510672
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||| |||||| |||||| | |||||| |||||||| |||||| ||||||| ||||||||||||| ||||| | || |||||| | |||||| | | ||    
T  31510531 ggatggcaattgtacccagacgcaatgggtacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttataggtctgagcacgggtacagata 31510630  T
Q  230 atacccac-aaatttaattgaagatgggcacaggtaagggta 270  Q
    |||||||| |||||||| ||   |||||||| ||||||||||    
T  31510631 atacccacaaaatttaaatgggtatgggcacgggtaagggta 31510672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 9061692 - 9061776
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtc 211  Q
    |||||||| |||||||||||||  || ||||  ||||||| ||||||||| | || ||||||||||||| ||||| |||||||||    
T  9061692 tagggatggcaattggacccagatcctatgggcacccgcaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtc 9061776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 12429930 - 12429815
Alignment:
Q  130 ggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgggta 229  Q
    ||||||||||| |||||| |  ||||||||||| |||||||||| |||||||  |||| ||||||    |||| ||||||||||| || || || |||||    
T  12429930 ggatgacaattcgacccatgttcaatggatacctgcataaaatatccacaatgagtagagtaaaatcatgctaccatgggtctggagatggatctgggta 12429831  T
Q  230 atacccacaaatttaa 245  Q
    ||||| || |||||||    
T  12429830 ataccaacgaatttaa 12429815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 6705 - 6856
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||||  ||||||| |||||||| |||||| ||||||| ||||||||||||||||| | | ||||||||||  |||||| ||    
T  6705 gtagggatggcaattggacccagctccaatgggtacccgcaaaaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacg 6804  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  6805 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 14586 - 14737
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccg 225  Q
    ||||||||| |||||||||||||  ||||||| |||||||| |||||| ||||||| ||||||||||||||||| | | ||||||||||  |||||| ||    
T  14586 gtagggatggcaattggacccagctccaatgggtacccgcaaaaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacg 14685  T
Q  226 ggtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    ||||||||||||||| |||| ||   |||||||| |||||||||| ||||||    
T  14686 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatact 14737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 5469 - 5619
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||||||| |||||||||  | ||||| |||||| | |||||| |||||||  |||||||||||  || || | ||||||||||| ||||||||||    
T  5469 tagggatgacaactggacccagatctaatgggtacccgtaaaaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgg 5568  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| || | |||||||| |||||||||| ||||||    
T  5569 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatact 5619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 250731 - 250643
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggg 215  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||| |||||||| ||||| |||||||| ||||    
T  250731 tagggatgacaattggacccaggcccaatggacacccgcaaaaaatacccgcaattggtatggtaaaaccccgctttcatgggtatggg 250643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 27162 - 27066
Alignment:
Q  126 gtagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggt 222  Q
    ||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| | |||| ||||||    
T  27162 gtagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggt 27066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 240064 - 240214
Alignment:
Q  127 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 226  Q
    |||||||| |||||||||||||  ||||||||||||| || |||||| ||||||| | ||||||||||  ||||| |  ||| |||||  |||||| |||    
T  240064 tagggatggcaattggacccagatccaatggatacccacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgg 240163  T
Q  227 gtaatacccacaaatttaattgaagatgggcacaggtaagggtattatact 277  Q
    |||||||||||||| |||| ||   | |||||| |||||||||| ||||||    
T  240164 gtaatacccacaaaattaaatgggtacgggcacgggtaagggtactatact 240214  T

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