View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3764_low_7 (Length: 453)
Name: NF3764_low_7
Description: NF3764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3764_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 18 - 440
Target Start/End: Original strand, 43343979 - 43344401
Alignment:
| Q |
18 |
caacttccgctgtgcttcctaatggtaagatttgggttagtggaagcaacacacatgaaacttataaagataatgataagtatccaactgagactagagt |
117 |
Q |
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| T |
43343979 |
caacttcggctgtgcttcctaatggtaagatttgggttagtggaagcaacacacatgaaacttataaagataatgataagtatccaactgagactagagt |
43344078 |
T |
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| Q |
118 |
tgaagcattctctcctccttatttggacgaggctttttataagtataggccacaaattaatcaagatgcaactaaaaaagagttaaagtatggaaataca |
217 |
Q |
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| T |
43344079 |
tgaagcattctctcctccttatttggacgaggcttttaataagtataggccacaaattaatcaaggtgcaactaaaaaagagttaaagtatggaaataca |
43344178 |
T |
|
| Q |
218 |
tttgaaacaaatttttcagtggaagatggggctgggttgacagctaatgatataaaggtgacaatgtatgcaccacctttcactactcatggtttctcca |
317 |
Q |
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| T |
43344179 |
tttgaaacaaatttttcagtggaagatggggctgggttgacagctaatgatataaaggtgacaatgtatgcaccacctttcactactcatggtttctcca |
43344278 |
T |
|
| Q |
318 |
tgggtcagaggcttataattctcaagatcgatgagctcgttgcacaagaacctggaagttacaccgttaggatggcggcgccaccatctggggccattgc |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43344279 |
tgggtcagaggcttataattctcaagatcgatgagctcgttgcacaagaacctggaagttacaccgttaggatggcggcgccaccatctggggccattgc |
43344378 |
T |
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| Q |
418 |
tcctccaggatactacttgctct |
440 |
Q |
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| T |
43344379 |
tcctccaggatactacttgctct |
43344401 |
T |
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