View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3764_low_9 (Length: 446)

Name: NF3764_low_9
Description: NF3764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3764_low_9
NF3764_low_9
[»] chr2 (62 HSPs)
chr2 (169-430)||(8396152-8396426)
chr2 (11-104)||(8396524-8396617)
chr2 (11-104)||(19915960-19916053)
chr2 (11-104)||(37654183-37654281)
chr2 (11-56)||(921097-921142)
chr2 (11-56)||(771996-772041)
chr2 (11-56)||(1106580-1106625)
chr2 (11-56)||(2456085-2456130)
chr2 (11-56)||(3430645-3430690)
chr2 (11-56)||(9276649-9276694)
chr2 (11-56)||(16246214-16246259)
chr2 (11-56)||(17134304-17134349)
chr2 (11-56)||(27328659-27328704)
chr2 (11-56)||(29737823-29737868)
chr2 (11-56)||(40854684-40854729)
chr2 (64-104)||(771929-771969)
chr2 (64-104)||(772183-772223)
chr2 (64-104)||(17484503-17484543)
chr2 (64-104)||(27328480-27328520)
chr2 (64-104)||(27328732-27328772)
chr2 (64-104)||(42629849-42629889)
chr2 (62-101)||(37838443-37838482)
chr2 (64-102)||(7297189-7297227)
chr2 (11-53)||(36444252-36444294)
chr2 (11-56)||(2057001-2057046)
chr2 (64-101)||(2094366-2094403)
chr2 (19-56)||(2094431-2094468)
chr2 (11-56)||(2314996-2315041)
chr2 (64-101)||(2456158-2456195)
chr2 (64-101)||(3358106-3358143)
chr2 (64-101)||(7297440-7297477)
chr2 (11-56)||(8899757-8899802)
chr2 (64-101)||(9276470-9276507)
chr2 (64-101)||(9276722-9276759)
chr2 (64-101)||(9331661-9331698)
chr2 (64-101)||(9331904-9331941)
chr2 (11-56)||(11949447-11949492)
chr2 (64-101)||(12759706-12759743)
chr2 (11-56)||(14630689-14630734)
chr2 (64-101)||(16246149-16246186)
chr2 (11-56)||(17484571-17484616)
chr2 (64-101)||(23673081-23673118)
chr2 (11-56)||(28650447-28650492)
chr2 (64-101)||(33106925-33106962)
chr2 (11-56)||(33106990-33107035)
chr2 (11-56)||(33865288-33865333)
chr2 (11-56)||(34253217-34253262)
chr2 (64-97)||(36210946-36210979)
chr2 (64-101)||(36444184-36444221)
chr2 (11-56)||(37838372-37838417)
chr2 (67-104)||(41500455-41500492)
chr2 (11-56)||(41500523-41500568)
chr2 (11-52)||(42630037-42630078)
chr2 (64-101)||(45124015-45124052)
chr2 (64-104)||(8396759-8396799)
chr2 (64-104)||(11949637-11949677)
chr2 (64-100)||(14630762-14630798)
chr2 (64-100)||(17484758-17484794)
chr2 (64-104)||(28216917-28216957)
chr2 (64-104)||(37654001-37654041)
chr2 (64-104)||(40854502-40854542)
chr2 (64-104)||(42630110-42630150)
[»] chr4 (78 HSPs)
chr4 (11-104)||(19168768-19168861)
chr4 (11-104)||(24623223-24623316)
chr4 (11-56)||(40988708-40988753)
chr4 (64-104)||(14564689-14564729)
chr4 (64-104)||(23553212-23553252)
chr4 (64-104)||(25734431-25734471)
chr4 (19-99)||(42549600-42549680)
chr4 (64-104)||(50276343-50276383)
chr4 (62-104)||(40988775-40988817)
chr4 (11-56)||(17847117-17847162)
chr4 (11-56)||(26017498-26017543)
chr4 (11-56)||(28264718-28264763)
chr4 (11-56)||(31208819-31208864)
chr4 (11-56)||(31591150-31591195)
chr4 (11-56)||(31973666-31973711)
chr4 (11-56)||(42273877-42273922)
chr4 (11-56)||(48707754-48707799)
chr4 (11-56)||(50276159-50276204)
chr4 (64-104)||(8881966-8882006)
chr4 (64-104)||(11795107-11795147)
chr4 (64-104)||(15985158-15985198)
chr4 (64-104)||(22298666-22298706)
chr4 (11-55)||(23553139-23553183)
chr4 (64-104)||(30466956-30466996)
chr4 (11-55)||(33693355-33693399)
chr4 (64-104)||(35929933-35929973)
chr4 (64-104)||(39995120-39995160)
chr4 (66-102)||(42273666-42273702)
chr4 (64-104)||(48551954-48551994)
chr4 (64-104)||(50542307-50542347)
chr4 (17-56)||(5227471-5227510)
chr4 (17-56)||(10588661-10588700)
chr4 (66-101)||(12196345-12196380)
chr4 (17-56)||(12196550-12196589)
chr4 (62-104)||(10588726-10588768)
chr4 (64-102)||(19496353-19496391)
chr4 (62-100)||(20534311-20534349)
chr4 (67-101)||(26017574-26017608)
chr4 (66-104)||(30141316-30141354)
chr4 (66-104)||(32118578-32118616)
chr4 (11-56)||(2055353-2055398)
chr4 (11-52)||(8882038-8882079)
chr4 (64-101)||(8882221-8882258)
chr4 (64-101)||(9339334-9339371)
chr4 (64-101)||(11795362-11795399)
chr4 (64-101)||(12196374-12196411)
chr4 (67-104)||(17847049-17847086)
chr4 (64-101)||(17993225-17993262)
chr4 (11-56)||(19496123-19496168)
chr4 (11-56)||(23135027-23135072)
chr4 (64-101)||(23135214-23135251)
chr4 (11-56)||(24458652-24458697)
chr4 (11-56)||(25730315-25730360)
chr4 (64-101)||(25730388-25730425)
chr4 (64-101)||(26017319-26017356)
chr4 (64-101)||(28160161-28160198)
chr4 (64-101)||(28264791-28264828)
chr4 (11-56)||(28812308-28812353)
chr4 (11-56)||(30467024-30467069)
chr4 (11-56)||(32118789-32118834)
chr4 (11-56)||(33807801-33807846)
chr4 (64-101)||(42273696-42273733)
chr4 (64-101)||(44490106-44490143)
chr4 (64-101)||(44490467-44490504)
chr4 (64-101)||(48707941-48707978)
chr4 (64-101)||(49118507-49118544)
chr4 (11-56)||(49118686-49118731)
chr4 (64-101)||(49118759-49118796)
chr4 (11-56)||(50542375-50542420)
chr4 (11-56)||(51371068-51371113)
chr4 (11-56)||(55517206-55517251)
chr4 (64-104)||(11795391-11795431)
chr4 (184-244)||(23775174-23775234)
chr4 (62-98)||(28264542-28264578)
chr4 (64-100)||(28812244-28812280)
chr4 (64-104)||(48149647-48149687)
chr4 (64-104)||(48551717-48551757)
chr4 (64-104)||(50276091-50276131)
[»] chr8 (47 HSPs)
chr8 (12-104)||(23935309-23935401)
chr8 (11-97)||(6016280-6016366)
chr8 (11-97)||(29485361-29485447)
chr8 (11-104)||(7434961-7435050)
chr8 (64-104)||(440733-440773)
chr8 (11-56)||(260052-260097)
chr8 (11-56)||(513382-513427)
chr8 (11-56)||(655824-655869)
chr8 (11-56)||(841559-841604)
chr8 (11-56)||(15847187-15847232)
chr8 (63-104)||(35443174-35443215)
chr8 (11-56)||(35443386-35443431)
chr8 (11-56)||(36400091-36400136)
chr8 (11-56)||(38107174-38107219)
chr8 (11-56)||(43806554-43806599)
chr8 (64-104)||(1293634-1293674)
chr8 (64-104)||(24193083-24193123)
chr8 (64-104)||(29485180-29485220)
chr8 (64-104)||(43806486-43806526)
chr8 (62-101)||(1293382-1293421)
chr8 (185-255)||(3039098-3039169)
chr8 (65-104)||(35443460-35443499)
chr8 (11-54)||(38633733-38633776)
chr8 (11-53)||(37933717-37933759)
chr8 (64-101)||(259874-259911)
chr8 (64-101)||(440988-441025)
chr8 (64-101)||(656010-656047)
chr8 (64-101)||(841745-841782)
chr8 (11-56)||(2533347-2533392)
chr8 (11-56)||(3875983-3876028)
chr8 (63-104)||(15847002-15847043)
chr8 (64-101)||(22683944-22683981)
chr8 (64-101)||(22684196-22684233)
chr8 (11-56)||(28496376-28496421)
chr8 (11-56)||(28707467-28707512)
chr8 (11-56)||(35884451-35884496)
chr8 (64-101)||(36400026-36400063)
chr8 (64-101)||(37933538-37933575)
chr8 (64-101)||(37933790-37933827)
chr8 (11-55)||(1293561-1293605)
chr8 (64-100)||(6016102-6016138)
chr8 (64-100)||(8137070-8137106)
chr8 (64-104)||(8137280-8137320)
chr8 (64-104)||(12010700-12010740)
chr8 (64-104)||(23972248-23972288)
chr8 (12-56)||(24193151-24193195)
chr8 (64-104)||(28496562-28496602)
[»] chr6 (37 HSPs)
chr6 (11-104)||(26936682-26936775)
chr6 (184-255)||(8438876-8438947)
chr6 (11-56)||(1915364-1915409)
chr6 (64-101)||(8178205-8178242)
chr6 (11-56)||(10256312-10256357)
chr6 (11-56)||(26393030-26393075)
chr6 (11-56)||(29050347-29050392)
chr6 (11-56)||(30379092-30379137)
chr6 (11-56)||(35223920-35223965)
chr6 (11-55)||(1077312-1077356)
chr6 (64-104)||(10931359-10931399)
chr6 (64-104)||(12612801-12612841)
chr6 (64-104)||(12626784-12626824)
chr6 (64-104)||(29050420-29050460)
chr6 (17-56)||(8178270-8178309)
chr6 (64-103)||(16193458-16193497)
chr6 (66-104)||(1077098-1077136)
chr6 (63-101)||(8178486-8178524)
chr6 (66-104)||(12626500-12626538)
chr6 (11-56)||(2390340-2390385)
chr6 (64-101)||(2707607-2707644)
chr6 (64-101)||(6503866-6503903)
chr6 (19-56)||(12612992-12613029)
chr6 (64-101)||(12626532-12626569)
chr6 (63-100)||(16193177-16193214)
chr6 (11-56)||(17428293-17428338)
chr6 (64-101)||(17942934-17942971)
chr6 (64-101)||(29050168-29050205)
chr6 (19-56)||(31376000-31376037)
chr6 (64-104)||(1077385-1077425)
chr6 (64-104)||(3258760-3258800)
chr6 (64-104)||(3408337-3408377)
chr6 (64-104)||(9382667-9382707)
chr6 (64-104)||(17943184-17943224)
chr6 (64-100)||(26393217-26393253)
chr6 (64-104)||(30379165-30379205)
chr6 (64-100)||(31376065-31376101)
[»] chr3 (64 HSPs)
chr3 (11-104)||(51475219-51475312)
chr3 (16-96)||(34019540-34019620)
chr3 (11-100)||(50977939-50978028)
chr3 (11-100)||(51081071-51081160)
chr3 (11-104)||(28699760-28699853)
chr3 (11-104)||(50364860-50364953)
chr3 (11-98)||(42641157-42641244)
chr3 (184-264)||(47895819-47895899)
chr3 (11-104)||(12748466-12748548)
chr3 (62-104)||(47329128-47329170)
chr3 (11-56)||(1017119-1017164)
chr3 (64-101)||(1448940-1448977)
chr3 (11-56)||(1687726-1687771)
chr3 (11-56)||(19664616-19664661)
chr3 (11-56)||(20760092-20760137)
chr3 (11-56)||(20913775-20913820)
chr3 (11-56)||(20921893-20921938)
chr3 (11-56)||(21564571-21564616)
chr3 (11-56)||(22852071-22852116)
chr3 (11-56)||(27070760-27070805)
chr3 (11-56)||(31122737-31122782)
chr3 (11-56)||(35346492-35346537)
chr3 (11-56)||(38446551-38446596)
chr3 (64-101)||(42107055-42107092)
chr3 (11-56)||(55164136-55164181)
chr3 (64-104)||(10618688-10618728)
chr3 (64-104)||(21656666-21656706)
chr3 (11-55)||(26455657-26455701)
chr3 (64-104)||(35346424-35346464)
chr3 (12-56)||(36314993-36315037)
chr3 (64-104)||(50977757-50977797)
chr3 (64-104)||(51080889-51080929)
chr3 (11-54)||(20813464-20813507)
chr3 (62-101)||(35346671-35346710)
chr3 (66-104)||(19664405-19664443)
chr3 (66-104)||(32651059-32651097)
chr3 (11-53)||(47329199-47329241)
chr3 (64-101)||(1016940-1016977)
chr3 (11-52)||(20086339-20086380)
chr3 (64-101)||(20760279-20760316)
chr3 (11-56)||(21656593-21656638)
chr3 (64-101)||(21890066-21890103)
chr3 (11-52)||(21890245-21890286)
chr3 (64-101)||(27070695-27070732)
chr3 (11-52)||(32650845-32650886)
chr3 (64-101)||(33151844-33151881)
chr3 (11-56)||(35608152-35608197)
chr3 (64-101)||(39069623-39069660)
chr3 (11-56)||(40922186-40922231)
chr3 (11-56)||(41250961-41251006)
chr3 (11-56)||(44798342-44798387)
chr3 (64-100)||(3697294-3697330)
chr3 (64-104)||(12748284-12748324)
chr3 (64-104)||(20086267-20086307)
chr3 (64-104)||(20813394-20813434)
chr3 (64-104)||(21564644-21564684)
chr3 (64-104)||(26455730-26455770)
chr3 (64-104)||(28699578-28699618)
chr3 (64-104)||(37248104-37248144)
chr3 (64-104)||(40922118-40922158)
chr3 (64-104)||(47473123-47473163)
chr3 (64-100)||(50365095-50365131)
chr3 (64-104)||(51475456-51475496)
chr3 (64-104)||(53196161-53196201)
[»] chr7 (58 HSPs)
chr7 (11-104)||(3797495-3797589)
chr7 (11-101)||(37354239-37354329)
chr7 (17-62)||(27774189-27774234)
chr7 (17-56)||(7336141-7336180)
chr7 (11-56)||(1469514-1469559)
chr7 (11-56)||(8162733-8162778)
chr7 (11-56)||(11050282-11050327)
chr7 (11-56)||(11476577-11476622)
chr7 (11-56)||(23842380-23842425)
chr7 (11-56)||(30798389-30798434)
chr7 (11-56)||(33884394-33884439)
chr7 (11-56)||(35600143-35600188)
chr7 (11-56)||(43752797-43752842)
chr7 (11-56)||(44544484-44544529)
chr7 (11-56)||(47219220-47219265)
chr7 (64-104)||(1469701-1469741)
chr7 (64-104)||(11476509-11476549)
chr7 (64-104)||(30876152-30876192)
chr7 (64-104)||(30876407-30876447)
chr7 (64-104)||(31684087-31684127)
chr7 (64-104)||(31684342-31684382)
chr7 (64-104)||(37393951-37393991)
chr7 (64-104)||(43968467-43968507)
chr7 (64-104)||(47119884-47119924)
chr7 (17-56)||(41113458-41113497)
chr7 (64-103)||(43752730-43752769)
chr7 (66-104)||(11050214-11050252)
chr7 (66-104)||(11476795-11476833)
chr7 (66-104)||(37394236-37394274)
chr7 (64-102)||(44544304-44544342)
chr7 (11-56)||(221350-221395)
chr7 (11-56)||(2960661-2960706)
chr7 (66-103)||(11050500-11050537)
chr7 (64-101)||(11476764-11476801)
chr7 (11-56)||(29248417-29248462)
chr7 (11-56)||(31684155-31684200)
chr7 (64-101)||(31793827-31793864)
chr7 (11-56)||(37394019-37394064)
chr7 (11-52)||(38427588-38427629)
chr7 (64-101)||(40851179-40851216)
chr7 (64-101)||(42979546-42979583)
chr7 (11-56)||(43968280-43968325)
chr7 (64-101)||(45233666-45233703)
chr7 (64-101)||(47219041-47219078)
chr7 (11-56)||(47272056-47272101)
chr7 (11-56)||(47281145-47281190)
chr7 (64-101)||(47294247-47294284)
chr7 (11-56)||(47294312-47294357)
chr7 (64-101)||(48628953-48628990)
chr7 (64-104)||(2960593-2960633)
chr7 (64-100)||(2960793-2960829)
chr7 (64-104)||(25801519-25801559)
chr7 (64-104)||(27364292-27364332)
chr7 (64-104)||(35600075-35600115)
chr7 (64-104)||(40520780-40520820)
chr7 (64-104)||(41113525-41113565)
chr7 (64-104)||(43968212-43968252)
chr7 (64-104)||(44551007-44551047)
[»] chr5 (60 HSPs)
chr5 (11-104)||(16752191-16752284)
chr5 (11-104)||(26035319-26035412)
chr5 (11-104)||(445029-445122)
chr5 (11-57)||(35342255-35342301)
chr5 (169-256)||(38843993-38844082)
chr5 (11-56)||(6600157-6600202)
chr5 (11-56)||(11000749-11000794)
chr5 (11-56)||(14717680-14717725)
chr5 (63-104)||(27116330-27116371)
chr5 (11-56)||(38964135-38964180)
chr5 (11-56)||(39002046-39002091)
chr5 (11-56)||(41282417-41282462)
chr5 (11-56)||(42993593-42993638)
chr5 (64-104)||(6600089-6600129)
chr5 (64-104)||(11000681-11000721)
chr5 (64-104)||(14952217-14952257)
chr5 (64-104)||(27457150-27457190)
chr5 (64-104)||(28078358-28078398)
chr5 (64-104)||(31710430-31710470)
chr5 (64-100)||(42993415-42993451)
chr5 (17-56)||(1052614-1052653)
chr5 (17-56)||(6252053-6252092)
chr5 (17-56)||(8215981-8216020)
chr5 (62-101)||(11692353-11692392)
chr5 (17-56)||(16095981-16096020)
chr5 (64-103)||(20408681-20408720)
chr5 (17-56)||(27116120-27116159)
chr5 (11-54)||(28078428-28078471)
chr5 (66-104)||(6600375-6600413)
chr5 (66-104)||(20079496-20079534)
chr5 (66-104)||(20408397-20408435)
chr5 (11-53)||(23128937-23128979)
chr5 (66-104)||(31710146-31710184)
chr5 (66-103)||(3352240-3352277)
chr5 (11-56)||(4015895-4015940)
chr5 (64-101)||(6251889-6251926)
chr5 (64-101)||(6252120-6252157)
chr5 (64-101)||(6331273-6331310)
chr5 (64-101)||(6332924-6332961)
chr5 (64-101)||(6600344-6600381)
chr5 (11-56)||(6739976-6740021)
chr5 (64-101)||(8216048-8216085)
chr5 (11-56)||(11692168-11692213)
chr5 (64-101)||(11935593-11935630)
chr5 (64-101)||(20408429-20408466)
chr5 (11-56)||(27457218-27457263)
chr5 (11-56)||(30208423-30208468)
chr5 (11-56)||(30297770-30297815)
chr5 (64-101)||(30297957-30297994)
chr5 (64-101)||(33760678-33760715)
chr5 (64-101)||(41282238-41282275)
chr5 (11-56)||(43166290-43166335)
chr5 (64-104)||(1052681-1052721)
chr5 (64-104)||(6739908-6739948)
chr5 (64-100)||(14717502-14717538)
chr5 (11-55)||(14952399-14952443)
chr5 (64-104)||(20079211-20079251)
chr5 (64-104)||(27116052-27116092)
chr5 (64-104)||(30863146-30863186)
chr5 (64-104)||(39002202-39002242)
[»] scaffold0542 (2 HSPs)
scaffold0542 (11-104)||(1946-2039)
scaffold0542 (64-104)||(2181-2221)
[»] chr1 (83 HSPs)
chr1 (11-104)||(33194624-33194717)
chr1 (11-101)||(30281706-30281796)
chr1 (11-104)||(48319019-48319112)
chr1 (17-62)||(16506803-16506848)
chr1 (184-244)||(23646798-23646858)
chr1 (62-104)||(21929672-21929714)
chr1 (62-104)||(36781378-36781420)
chr1 (11-56)||(5400945-5400990)
chr1 (11-56)||(7651737-7651782)
chr1 (11-56)||(19315715-19315760)
chr1 (11-56)||(23228215-23228260)
chr1 (11-56)||(23767435-23767480)
chr1 (11-56)||(26549463-26549508)
chr1 (11-56)||(40721418-40721463)
chr1 (11-56)||(41106091-41106136)
chr1 (64-101)||(43396571-43396608)
chr1 (11-56)||(46825606-46825651)
chr1 (11-56)||(49094732-49094777)
chr1 (11-55)||(9962826-9962870)
chr1 (64-104)||(19315788-19315828)
chr1 (12-56)||(21929602-21929646)
chr1 (64-104)||(33325620-33325660)
chr1 (64-104)||(33325875-33325915)
chr1 (64-104)||(33673910-33673950)
chr1 (64-104)||(36781125-36781165)
chr1 (64-104)||(40721244-40721284)
chr1 (64-104)||(44978721-44978761)
chr1 (11-55)||(46051525-46051569)
chr1 (64-104)||(46051598-46051638)
chr1 (17-56)||(9974923-9974962)
chr1 (21-56)||(18917609-18917644)
chr1 (11-54)||(43396750-43396793)
chr1 (19-54)||(44978791-44978826)
chr1 (62-101)||(45350673-45350712)
chr1 (62-100)||(5400768-5400806)
chr1 (65-103)||(6711589-6711627)
chr1 (62-100)||(9878990-9879028)
chr1 (18-56)||(24204492-24204530)
chr1 (63-101)||(25988508-25988546)
chr1 (66-104)||(38473865-38473903)
chr1 (66-104)||(50099084-50099122)
chr1 (11-56)||(7553037-7553082)
chr1 (64-101)||(7651810-7651847)
chr1 (64-101)||(8141694-8141731)
chr1 (11-56)||(12143147-12143192)
chr1 (64-101)||(16508136-16508173)
chr1 (11-56)||(18892404-18892449)
chr1 (64-101)||(22351081-22351118)
chr1 (184-244)||(23615504-23615562)
chr1 (64-101)||(25800539-25800576)
chr1 (64-101)||(25800789-25800826)
chr1 (11-56)||(25988292-25988337)
chr1 (64-101)||(26549536-26549573)
chr1 (64-101)||(28425319-28425356)
chr1 (11-56)||(28425384-28425429)
chr1 (11-56)||(33714382-33714427)
chr1 (11-56)||(36781193-36781238)
chr1 (11-56)||(37216971-37217016)
chr1 (11-56)||(38473647-38473692)
chr1 (64-101)||(38473834-38473871)
chr1 (64-101)||(43396823-43396860)
chr1 (11-56)||(46095096-46095141)
chr1 (11-56)||(48669417-48669462)
chr1 (64-101)||(48802287-48802324)
chr1 (11-56)||(48802352-48802397)
chr1 (11-52)||(49814375-49814416)
chr1 (64-101)||(50533279-50533316)
chr1 (64-101)||(50690091-50690128)
chr1 (64-101)||(52350132-52350169)
chr1 (64-104)||(5401018-5401058)
chr1 (12-52)||(7608791-7608831)
chr1 (64-104)||(9962899-9962939)
chr1 (64-104)||(18917672-18917712)
chr1 (64-104)||(19315533-19315573)
chr1 (64-100)||(21965213-21965249)
chr1 (12-56)||(33674093-33674137)
chr1 (64-104)||(33674165-33674205)
chr1 (64-104)||(36157631-36157671)
chr1 (64-104)||(38473579-38473619)
chr1 (64-100)||(40721491-40721527)
chr1 (64-104)||(45670439-45670479)
chr1 (64-104)||(45670694-45670734)
chr1 (64-104)||(52146886-52146926)
[»] scaffold0727 (2 HSPs)
scaffold0727 (64-104)||(5333-5373)
scaffold0727 (11-55)||(5260-5304)
[»] scaffold0005 (1 HSPs)
scaffold0005 (64-104)||(252646-252686)
[»] scaffold0184 (2 HSPs)
scaffold0184 (11-56)||(13170-13215)
scaffold0184 (64-104)||(13243-13283)
[»] scaffold0078 (2 HSPs)
scaffold0078 (11-56)||(59629-59674)
scaffold0078 (64-104)||(59561-59601)
[»] scaffold0004 (3 HSPs)
scaffold0004 (11-56)||(218961-219006)
scaffold0004 (62-104)||(219032-219074)
scaffold0004 (64-104)||(218778-218818)
[»] scaffold0338 (1 HSPs)
scaffold0338 (64-101)||(5748-5785)
[»] scaffold0117 (1 HSPs)
scaffold0117 (64-101)||(14545-14582)
[»] scaffold0693 (1 HSPs)
scaffold0693 (64-104)||(4980-5020)
[»] scaffold0122 (1 HSPs)
scaffold0122 (64-100)||(11262-11298)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 169 - 430
Target Start/End: Complemental strand, 8396426 - 8396152
Alignment:
Q  169 taatttagtcacatcaatatcatttctcttttagattttataaatcatgtgtttgtg--taaataaattttatttggggttatgtctataaaagacttat 266  Q
    ||||||| | ||||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||     
T  8396426 taatttaattacatcaatatcatttctctctcagattttataaataatgtgtttgtgcctaaataaattttatttggggttatgtctttaaaagacttac 8396327  T
Q  267 cgaagggtccaactttgaattatttaaaggacccgtcacaaaagcacaagatatcgcaaaataaatgttgccaaaagatgtcttaatacaagatttctta 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8396326 cgaagggtccaactttgaattatttaaaggacccgtcacaaaagcacaagatctcgcaaaataaatgttgccaaaagatgtcttaatacaagatttctta 8396227  T
Q  367 ttgcatgcactctatacaaatacgcatgc-----------aagaaaaagaaaaacagaacagtaagaactagaag 430  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  8396226 ttgcatgcactctatacaaatacgcatgcaagaccagaaaaagaaaaagaaaaacagaacagtaagaactagaag 8396152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 8396617 - 8396524
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||    
T  8396617 caaagatgagttcaaggaagcaattatcaactatgctatctacaatgcgagactaaaaggacttgtttgtgatttttgaaacttaaatgaccac 8396524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 19916053 - 19915960
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  19916053 caaagatgagttcaaggaaccaattaccaactatgctatctacaatgggagactaaaaggacttgtttgagacttttgaaacttaaaggaccac 19915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 37654183 - 37654281
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaa-----aggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||| |||||| ||||||| | ||||     |||||||||||| ||||||| ||||||||||||||||    
T  37654183 caaagatgagttcaaggaagcaattaccaactatgttatctataatgcgaaactaaactaaaaggacttgtttgagacttttgaaacttaaaggaccac 37654281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 921097 - 921142
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  921097 caaagatgagttcaaggaagcaattatcaactatgctatctacaat 921142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 772041 - 771996
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  772041 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 771996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 1106625 - 1106580
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1106625 caaagatgagttcaaggaagcaattaccaattatgctatctacaat 1106580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2456085 - 2456130
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  2456085 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 2456130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 3430690 - 3430645
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  3430690 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 3430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 9276649 - 9276694
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  9276649 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 9276694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 16246259 - 16246214
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  16246259 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 16246214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17134304 - 17134349
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  17134304 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 17134349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 27328659 - 27328704
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  27328659 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 27328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 29737823 - 29737868
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||    
T  29737823 caaagatgagttcaaggaagcaattatcaactatgctatcgacaat 29737868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 40854684 - 40854729
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  40854684 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 40854729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 771969 - 771929
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  771969 taaaaggacttgtttgggacttttgaaacttaaaggaccac 771929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 772183 - 772223
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  772183 taaaaggacttgtttgagacttttgaaacttaaaggaccac 772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 17484543 - 17484503
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  17484543 taaaaggacttgtttgggacttttgaaacttaaaggaccac 17484503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 27328520 - 27328480
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  27328520 taaaaggacttgtttgagacttttgaaacttaaaggaccac 27328480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 27328732 - 27328772
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  27328732 taaaaggacttgtttgagacttttgaaacttaaaggaccac 27328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 42629889 - 42629849
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  42629889 taaaaggacttgtttgggacttttgaaacttaaaggaccac 42629849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 37838443 - 37838482
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  37838443 attaaaaggacttgtttgagacttttgaaacttaaaggac 37838482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 7297227 - 7297189
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacc 102  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  7297227 taaaaggacttgtttgagacttttgaaacttaaaggacc 7297189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 36444294 - 36444252
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctac 53  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  36444294 caaagatgagttcaaggaagcaattaccaactatgctatctac 36444252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2057001 - 2057046
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  2057001 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 2057046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 2094403 - 2094366
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  2094403 taaaaggacttgtttgagacttttgaaacttaaaggac 2094366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 2094468 - 2094431
Alignment:
Q  19 agttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  2094468 agttcaaggaagcaattaccaactatgctatctacaat 2094431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 2315041 - 2314996
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  2315041 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 2314996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 2456158 - 2456195
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  2456158 taaaaggacttgtttgagacttttgaaacttaaaggac 2456195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 3358143 - 3358106
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  3358143 taaaaggacttgtttgggacttttgaaacttaaaggac 3358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 7297440 - 7297477
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  7297440 taaaaggacttgtttgagacttttgaaacttaaaggac 7297477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 8899757 - 8899802
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  8899757 caaagatgagttcatggaagcaattaccaactatgctatctacaat 8899802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 9276507 - 9276470
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9276507 taaaaggacttgtttgggacttttgaaacttaaaggac 9276470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 9276722 - 9276759
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9276722 taaaaggacttgtttgggacttttgaaacttaaaggac 9276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 9331698 - 9331661
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9331698 taaaaggacttgtttgggacttttgaaacttaaaggac 9331661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 9331904 - 9331941
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9331904 taaaaggacttgtttgggacttttgaaacttaaaggac 9331941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11949492 - 11949447
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  11949492 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 11949447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 12759743 - 12759706
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  12759743 taaaaggacttgtttgagacttttgaaacttaaaggac 12759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 14630689 - 14630734
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  14630689 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 14630734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 16246186 - 16246149
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  16246186 taaaaggacttgtttgggacttttgaaacttaaaggac 16246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17484616 - 17484571
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  17484616 caaagatgagttcaaagaagcaattaccaactatgctatctacaat 17484571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 23673081 - 23673118
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  23673081 taaaaggacttgtttgagacttttgaaacttaaaggac 23673118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28650492 - 28650447
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  28650492 caaagatgagttcaaggaagaaattaccaactatgctatctacaat 28650447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 33106962 - 33106925
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  33106962 taaaaggacttgtttgagacttttgaaacttaaaggac 33106925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33107035 - 33106990
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  33107035 caaagatgagttcaaggaagcaattaccaactatgatatctacaat 33106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33865333 - 33865288
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  33865333 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 33865288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 34253217 - 34253262
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  34253217 caaagatgagttcaagaaagcaattaccaactatgctatctacaat 34253262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 36210979 - 36210946
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaa 97  Q
    |||||||||||||||||||||||| |||||||||    
T  36210979 taaaaggacttgtttgtgacttttgaaacttaaa 36210946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 36444221 - 36444184
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  36444221 taaaaggacttgtttgagacttttgaaacttaaaggac 36444184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 37838372 - 37838417
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  37838372 caaagatgagttcaaagaagcaattaccaactatgctatctacaat 37838417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 41500492 - 41500455
Alignment:
Q  67 aaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  41500492 aaggacttgtttgagacttttgaaacttaaaggaccac 41500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 41500568 - 41500523
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  41500568 caaagatgagttcaaggaagcaattaccaactatgctatgtacaat 41500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 42630037 - 42630078
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||| ||||||||||||| |||||||||||    
T  42630037 caaagatgagttcaagaaagcaattatcaattatgctatcta 42630078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 45124052 - 45124015
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  45124052 taaaaggacttgtttgagacttttgaaacttaaaggac 45124015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 8396759 - 8396799
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  8396759 taaaatgacttgtttgagacttttgaaacttaaaggaccac 8396799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 11949637 - 11949677
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  11949637 taaaaggacttgttttggacttttgaaacttaaaggaccac 11949677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 14630762 - 14630798
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  14630762 taaaaggacttgtttgggacctttaaaacttaaagga 14630798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 17484758 - 17484794
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  17484758 taaaaggacttgtttgagacttttgaaacttaaagga 17484794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 28216957 - 28216917
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  28216957 taaaaggacttgtttgggacttttgaaacttaaagaaccac 28216917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 37654041 - 37654001
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  37654041 taaaaggacttgtttgagacttttgaaacttaaatgaccac 37654001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40854542 - 40854502
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  40854542 taaaatgacttgtttgagacttttaaaacttaaaagaccac 40854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 42630110 - 42630150
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  42630110 taaaaagacttgtttgagacttttgaaacttaaaggaccac 42630150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 19168861 - 19168768
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  19168861 caaagatgagttcaaggaagcaattaccaactatgctatctacaatgtgagactaaaaggacttgtttgagacttttaaaacttaaaggaccac 19168768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 24623223 - 24623316
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||| ||||||    
T  24623223 caaagatgagttcaaggaagcaattaccaactatgctatctacaatgcgagactaaaaggacttatttgagacttttgaaacttaaatgaccac 24623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 40988708 - 40988753
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  40988708 caaagatgagttcaaggaagcaattatcaactatgctatctacaat 40988753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 14564729 - 14564689
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  14564729 taaaaggacttgtttgagacttttaaaacttaaaggaccac 14564689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 23553212 - 23553252
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  23553212 taaaaggatttgtttgtgacttttaaaacttaaaggaccac 23553252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 25734431 - 25734471
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  25734431 taaaaggacttgtttgagacttttaaaacttaaaggaccac 25734471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 42549680 - 42549600
Alignment:
Q  19 agttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaagg 99  Q
    ||||||| |||||||||| ||| |||| |||||||||||| ||  ||||| |||||||||  ||||||| |||||||||||    
T  42549680 agttcaatgaagcaattaccaactatgttatctacaatgcaaggctaaaatgacttgtttaggacttttgaaacttaaagg 42549600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 50276343 - 50276383
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  50276343 taaaaggacttgtttgagacttttaaaacttaaaggaccac 50276383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 40988775 - 40988817
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  40988775 attaaaaggacttgtttgagacttttgaaacttaaaggaccac 40988817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17847162 - 17847117
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  17847162 caaagatgagttcaaggaagcaattaccaattatgctatctacaat 17847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 26017498 - 26017543
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  26017498 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 26017543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 28264718 - 28264763
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  28264718 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 28264763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31208819 - 31208864
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  31208819 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 31208864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31591150 - 31591195
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  31591150 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 31591195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31973666 - 31973711
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  31973666 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 31973711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42273877 - 42273922
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  42273877 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 42273922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 48707799 - 48707754
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  48707799 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 48707754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 50276204 - 50276159
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  50276204 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 50276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 8882006 - 8881966
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  8882006 taaaaggacttgtttgggacttttgaaacttaaaggaccac 8881966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 11795147 - 11795107
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  11795147 taaaaggacttgtttgggacttttgaaacttaaaggaccac 11795107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 15985158 - 15985198
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  15985158 taaaaggacttgtttgggacttttgaaacttaaaggaccac 15985198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 22298666 - 22298706
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  22298666 taaaaggacttgtttgagacttttgaaacttaaaggaccac 22298706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 23553139 - 23553183
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  23553139 caaagatgagttcaaggaagcaattaacaattatgctatctacaa 23553183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 30466996 - 30466956
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  30466996 taaaaggacttgtttgagacttttgaaacttaaaggaccac 30466956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 33693399 - 33693355
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  33693399 caaagatgagttcaaggaagcaattaccaactatgctatctacaa 33693355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 35929973 - 35929933
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35929973 taaaaggacttgtttgagacttttgaaacttaaaggaccac 35929933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 39995160 - 39995120
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  39995160 taaaaagacttgtttgagacttttaaaacttaaaggaccac 39995120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 42273702 - 42273666
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggacc 102  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42273702 aaaggacttgtttgggacttttaaaacttaaaggacc 42273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 48551954 - 48551994
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  48551954 taaaaggacttgtttgagacttttgaaacttaaaggaccac 48551994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 50542347 - 50542307
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  50542347 taaaaggacttgtttgagacttttgaaacttaaaggaccac 50542307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 5227471 - 5227510
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  5227471 tgagttcaaggaagcaattaccaactatgctatctacaat 5227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 10588661 - 10588700
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  10588661 tgagttcaaggaagcaattaccaactatgctatctacaat 10588700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 12196380 - 12196345
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||||||| |||||||||||||    
T  12196380 aaaggacttgtttgtgacttttgaaacttaaaggac 12196345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 12196550 - 12196589
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  12196550 tgagttcaaggaagcaattaccaactatgctatctacaat 12196589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 10588726 - 10588768
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||    
T  10588726 attaaaaggatttgtttgggacttttgaaacttaaaggaccac 10588768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 19496353 - 19496391
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacc 102  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  19496353 taaaaggacttgtttgagacttttgaaacttaaaggacc 19496391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 20534311 - 20534349
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  20534311 attaaaaggacttgtttgagacttttgaaacttaaagga 20534349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 26017574 - 26017608
Alignment:
Q  67 aaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||||||||||||||||||| |||||||||||||    
T  26017574 aaggacttgtttgtgacttttgaaacttaaaggac 26017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 30141316 - 30141354
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  30141316 aaaggacttgtttgtgatttttgaaacttaaaggaccac 30141354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 32118616 - 32118578
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  32118616 aaaggacttgtttgggacttttgaaacttaaaggaccac 32118578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2055353 - 2055398
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||| ||||||||||||||||| |||| ||||||||||    
T  2055353 caaagatgagtttaaggaagcaattatcaactatgttatctacaat 2055398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 8882079 - 8882038
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| ||||||||| |||||||||||||| |||||||||||    
T  8882079 caaagatgagttcaaagaagcaattatcaactatgctatcta 8882038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 8882221 - 8882258
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  8882221 taaaaggacttgtttgagacttttgaaacttaaaggac 8882258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 9339334 - 9339371
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9339334 taaaaggacttgtttgagacttttgaaacttaaaggac 9339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 11795362 - 11795399
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  11795362 taaaaggacttgtttgtgacttttgaaactaaaaggac 11795399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 12196411 - 12196374
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  12196411 taaaaggacttgtttgagacttttgaaacttaaaggac 12196374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 17847086 - 17847049
Alignment:
Q  67 aaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  17847086 aaggacttgtttgagacttttgaaacttaaaggaccac 17847049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 17993225 - 17993262
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  17993225 taaaaggacttgtttgggacttttgaaacttaaaggac 17993262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 19496168 - 19496123
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  19496168 caaagatgagttcaaggaagcaattaccaactatggtatctacaat 19496123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23135072 - 23135027
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  23135072 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 23135027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 23135214 - 23135251
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  23135214 taaaaggacttgtttgagactttttaaacttaaaggac 23135251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 24458697 - 24458652
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  24458697 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 24458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 25730315 - 25730360
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  25730315 caaagatgagttcaaggaatcaattaccaactatgctatctacaat 25730360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 25730388 - 25730425
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  25730388 taaaaggacttgtttgagacttttgaaacttaaaggac 25730425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 26017356 - 26017319
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  26017356 taaaaggacttgtttgggacttttgaaacttaaaggac 26017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 28160161 - 28160198
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  28160161 taaaaggacttgtttgagacttttgaaacttaaaggac 28160198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 28264791 - 28264828
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  28264791 taaaaggacttgtttgggacttttgaaacttaaaggac 28264828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28812353 - 28812308
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||| |||||||||||||||| ||| |||||||||||||||    
T  28812353 caaagatgacttcaaggaagcaattaccaactatgctatctacaat 28812308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30467069 - 30467024
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  30467069 caaagatgagttcaaggaagaaattaccaactatgctatctacaat 30467024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 32118789 - 32118834
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  32118789 caaagatgagttcaatgaagcaattaccaactatgctatctacaat 32118834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33807846 - 33807801
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  33807846 caaagatgagttcaaagaagcaattaccaactatgctatctacaat 33807801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 42273733 - 42273696
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  42273733 taaaaggacttgtttgggacttttgaaacttaaaggac 42273696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 44490143 - 44490106
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  44490143 taaaaggacttgtttgagacttttgaaacttaaaggac 44490106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 44490467 - 44490504
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  44490467 taaaaggacttgtttgggacttttgaaacttaaaggac 44490504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 48707941 - 48707978
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  48707941 taaaaggacttgtttgggacttttgaaacttaaaggac 48707978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 49118544 - 49118507
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  49118544 taaaaggacttgtttgagacttttgaaacttaaaggac 49118507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 49118686 - 49118731
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  49118686 caaagatgagttcaatgaagcaattaccaactatgctatctacaat 49118731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 49118759 - 49118796
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  49118759 taaaaggacttgtttgggacttttgaaacttaaaggac 49118796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 50542420 - 50542375
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  50542420 caaagatgagttcaatgaagcaattaccaactatgctatctacaat 50542375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 51371113 - 51371068
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||| |||||||||||||||| ||| |||||||||||||||    
T  51371113 caaagatgaattcaaggaagcaattaccaactatgctatctacaat 51371068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 55517251 - 55517206
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  55517251 caaagatgagttcaaagaagcaattaccaactatgctatctacaat 55517206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 11795391 - 11795431
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  11795391 taaaaggacttgtttgagacttttgatacttaaaggaccac 11795431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 23775234 - 23775174
Alignment:
Q  184 aatatcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggg 244  Q
    |||||||||| ||||||| ||||||| |||||||||| ||   ||||| ||||||||||||    
T  23775234 aatatcatttatcttttaaattttatcaatcatgtgtgtgctcaaatatattttatttggg 23775174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 28264578 - 28264542
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaag 98  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  28264578 attaaaaggacttgtttgggacttttgaaacttaaag 28264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 28812280 - 28812244
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  28812280 taaaaggacttgtttgagacttttgaaacttaaagga 28812244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 48149647 - 48149687
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  48149647 taaaaggacttgtttgggacttttgaaacttaaagaaccac 48149687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 48551757 - 48551717
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  48551757 taaaatgacttgtttgagacttttgaaacttaaaggaccac 48551717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 50276131 - 50276091
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||| ||||||||    
T  50276131 taaaaggacttgtttgggacttttgaaacttacaggaccac 50276091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 23935309 - 23935401
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||    
T  23935309 aaagatgagttcaaggaagcaattatcaactatgctatctacaatgcgagactaaaaggatttgtttgagacttttgaaacttaaaggaccac 23935401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 6016280 - 6016366
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaa 97  Q
    ||||| |||||| || |||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  6016280 caaagatgagtttaaagaagcaattaccaactatgctatctacaatgcgagactaaaaggacttgtttgagacttttgaaacttaaa 6016366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 29485361 - 29485447
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaa 97  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||||||||| || || |||||||||| | |||||||||||||||    
T  29485361 caaagatgagttcaaggaagcaattaccaactatgttatctacaatgcgagactagaatgacttgtttgagccttttaaaacttaaa 29485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 7434961 - 7435050
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||| |||| ||||||||||||     ||||||| ||||||||||||||||    
T  7434961 caaagatgagttcaaggaagcaattaccaactatgttatctacaatgtgagactaaaaggacttga----gacttttgaaacttaaaggaccac 7435050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 440773 - 440733
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  440773 taaaaggacttgtttgagacttttaaaacttaaaggaccac 440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 260052 - 260097
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  260052 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 260097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 513382 - 513427
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  513382 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 513427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 655869 - 655824
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  655869 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 655824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 841604 - 841559
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  841604 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 841559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 15847187 - 15847232
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  15847187 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 15847232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 35443215 - 35443174
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  35443215 ttaaaaggacttgtttgggacttttgaaacttaaaggaccac 35443174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 35443386 - 35443431
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  35443386 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 35443431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 36400136 - 36400091
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  36400136 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 36400091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 38107174 - 38107219
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  38107174 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 38107219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 43806599 - 43806554
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  43806599 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 43806554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1293634 - 1293674
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  1293634 taaaaggacttgtttgagacttttaaaatttaaaggaccac 1293674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 24193123 - 24193083
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  24193123 taaaaggacttgtttgagacttttaaaatttaaaggaccac 24193083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 29485220 - 29485180
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  29485220 taaaaggacttgtttgtgacttttgaaacttaaaagaccac 29485180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 43806526 - 43806486
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  43806526 taaaaggacttgtttgcgacttttgaaacttaaaggaccac 43806486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 1293421 - 1293382
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  1293421 attaaaaggacttgtttgtgatttttgaaacttaaaggac 1293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 3039098 - 3039169
Alignment:
Q  185 atatcatttctcttttagattttataaatcatg-tgtttgtgtaaataaattttatttggggttatgtctat 255  Q
    |||| |||||||||||| ||||||| ||||||| |||  |  ||||||||||||||||| ||||||||||||    
T  3039098 atataatttctcttttaaattttattaatcatggtgtacgcctaaataaattttatttgaggttatgtctat 3039169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 35443460 - 35443499
Alignment:
Q  65 aaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  35443460 aaaaggacttgtttgggacttttgaaacttaaaggaccac 35443499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 38633776 - 38633733
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctaca 54  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  38633776 caaagatgagttcaaggaagcaattaccaactatgctatctaca 38633733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 37933717 - 37933759
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctac 53  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  37933717 caaagatgagttcaaggaagcaattaccaactatgctatctac 37933759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 259911 - 259874
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  259911 taaaaggacttgtttgggacttttgaaacttaaaggac 259874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 440988 - 441025
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  440988 taaaaggacttgtttgggacttttgaaacttaaaggac 441025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 656010 - 656047
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  656010 taaaaggacttgtttgggacttttgaaacttaaaggac 656047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 841745 - 841782
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  841745 taaaaggacttgtttgggacttttgaaacttaaaggac 841782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2533347 - 2533392
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  2533347 caaagatgagttcaaggaagcaattaccaactatgatatctacaat 2533392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 3875983 - 3876028
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  3875983 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 3876028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 15847043 - 15847002
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  15847043 ttaaaaggacttgtttggaacttttgaaacttaaaggaccac 15847002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 22683981 - 22683944
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  22683981 taaaaggacttgtttgggacttttgaaacttaaaggac 22683944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 22684196 - 22684233
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  22684196 taaaaggacttgtttgggacttttgaaacttaaaggac 22684233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28496421 - 28496376
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  28496421 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 28496376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28707512 - 28707467
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  28707512 caaagatgagttcaaggaagcaattaccaattatgatatctacaat 28707467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35884496 - 35884451
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  35884496 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 35884451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 36400063 - 36400026
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  36400063 taaaaggacttgtttgggacttttgaaacttaaaggac 36400026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 37933575 - 37933538
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  37933575 taaaaggacttgtttgggacttttgaaacttaaaggac 37933538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 37933790 - 37933827
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  37933790 taaaaggacttgtttgagacttttgaaacttaaaggac 37933827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 1293561 - 1293605
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||    
T  1293561 caaagatgagttcaaggaagcaattaccaactatgttatctacaa 1293605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 6016138 - 6016102
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  6016138 taaaaagacttgtttgtgacttttgaaacttaaagga 6016102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 8137106 - 8137070
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  8137106 taaaaggacttgtttgagacttttgaaacttaaagga 8137070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 8137280 - 8137320
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||| ||| ||||||||||||||||    
T  8137280 taaaaggacttgtttgggacctttgaaacttaaaggaccac 8137320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 12010700 - 12010740
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  12010700 taaaatgacttgtttgggacttttgaaacttaaaggaccac 12010740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 23972288 - 23972248
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||| ||| ||||||||||||||||    
T  23972288 taaaaggacttgtttgggacctttgaaacttaaaggaccac 23972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 24193195 - 24193151
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||| |||||||||||||||||||| ||| |||| ||||||||||    
T  24193195 aaagatgagttcaaggaagcaattaccaactatgttatctacaat 24193151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 28496562 - 28496602
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||| ||||||| ||||||| ||||||||||||||||    
T  28496562 taaaaggatttgtttgagacttttgaaacttaaaggaccac 28496602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 26936682 - 26936775
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  26936682 caaagatgagttcaaggaaacaattatcaactatgctatctacaatgcgagactaaaaggacttgtctgggacttttgaaacttaaaggaccac 26936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 8438947 - 8438876
Alignment:
Q  184 aatatcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggggttatgtctat 255  Q
    |||||||| ||||||||| ||||||| |||||||||| ||  |||||||||||||| |||| || |||||||    
T  8438947 aatatcatctctcttttaaattttatcaatcatgtgtgtgcctaaataaattttatatgggtttgtgtctat 8438876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 1915409 - 1915364
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1915409 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 1915364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 8178242 - 8178205
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8178242 taaaaggacttgtttgggacttttaaaacttaaaggac 8178205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 10256312 - 10256357
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  10256312 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 10256357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 26393075 - 26393030
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  26393075 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 26393030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 29050347 - 29050392
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  29050347 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 29050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 30379092 - 30379137
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  30379092 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 30379137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35223965 - 35223920
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  35223965 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 35223920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 1077312 - 1077356
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  1077312 caaagatgagttcaaggaagcaattaccaactatgctatctacaa 1077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 10931359 - 10931399
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  10931359 taaaaggatttgtttgtgacttttgaaacttaaaggaccac 10931399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 12612841 - 12612801
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  12612841 taaaaggacttgtttgagacttttgaaacttaaaggaccac 12612801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 12626784 - 12626824
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  12626784 taaaaggacttgtttgggacttttgaaacttaaaggaccac 12626824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 29050420 - 29050460
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  29050420 taaaaggacttgtttgggacttttgaaacttaaaggaccac 29050460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 8178309 - 8178270
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  8178309 tgagttcaaggaagcaattaccaactatgctatctacaat 8178270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 16193458 - 16193497
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  16193458 taaaaggacttgtttgggacttttgaaacttaaaggacca 16193497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 1077136 - 1077098
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  1077136 aaaggacttgtttgggacttttgaaacttaaaggaccac 1077098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 8178486 - 8178524
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  8178486 ttaaaaggacttgtttgggacttttgaaacttaaaggac 8178524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 12626538 - 12626500
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  12626538 aaaggacttgtttgggacttttgaaacttaaaggaccac 12626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2390340 - 2390385
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  2390340 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 2390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 2707607 - 2707644
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  2707607 taaaaggacttgtttgagacttttgaaacttaaaggac 2707644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 6503866 - 6503903
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6503866 taaaaggacttgtttgagacttttgaaacttaaaggac 6503903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 12613029 - 12612992
Alignment:
Q  19 agttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  12613029 agttcaaggaagcaattaccaactatgctatctacaat 12612992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 12626569 - 12626532
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  12626569 taaaaggacttgtttgggacttttgaaacttaaaggac 12626532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 16193214 - 16193177
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  16193214 ttaaaaggacttgtttgggacttttgaaacttaaagga 16193177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17428338 - 17428293
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  17428338 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 17428293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 17942971 - 17942934
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  17942971 taaaaggacttgtttgagacttttgaaacttaaaggac 17942934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 29050205 - 29050168
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  29050205 taaaaggacttgtttgggacttttgaaacttaaaggac 29050168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 31376000 - 31376037
Alignment:
Q  19 agttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  31376000 agttcaaggaagcaattaacaactatgctatctacaat 31376037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1077385 - 1077425
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  1077385 taaaaggacttgtttgagacttttgaaacttaaatgaccac 1077425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 3258800 - 3258760
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  3258800 taaaaagacttgtttgggacttttgaaacttaaaggaccac 3258760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 3408337 - 3408377
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  3408337 taaaagaacttgtttgagacttttgaaacttaaaggaccac 3408377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 9382667 - 9382707
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  9382667 taaaaggacttgtttggaacttttgaaacttaaaggaccac 9382707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 17943184 - 17943224
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  17943184 taaaatgacttgtttgggacttttgaaacttaaaggaccac 17943224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 26393217 - 26393253
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  26393217 taaaaggacttgtttgagacttttgaaacttaaagga 26393253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 30379165 - 30379205
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  30379165 taaaaggacttgtttgggacttttgaaacttaaatgaccac 30379205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 31376065 - 31376101
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  31376065 taaaaggacttgtttgagacttttgaaacttaaagga 31376101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 51475312 - 51475219
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||    
T  51475312 caaagatgagttcaaggaagcaattaccaactatgctatctacaatgctagactaaaaggacttgtttgagacttttgaaacttaaaggaccac 51475219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 34019540 - 34019620
Alignment:
Q  16 gtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaa 96  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  34019540 gtgagttcaagtaagcaattatcaactatgctatctacaatgcgagactaaaaggacttgtttgagacttttgaaacttaa 34019620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 50977939 - 50978028
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    ||||| ||||||||||||||||| || ||| ||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||    
T  50977939 caaagatgagttcaaggaagcaactaccaactatgctatctacaatgcgagactaaaatgacttgtttgagacttttgaaacttaaagga 50978028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 51081071 - 51081160
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    ||||| ||||||||||||||||| || ||| ||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||    
T  51081071 caaagatgagttcaaggaagcaactaccaactatgctatctacaatgcgagactaaaatgacttgtttgagacttttgaaacttaaagga 51081160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 28699760 - 28699853
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||||| | || ||||| | |||||||||| ||||| |||||||||| ||||||| ||||||||||||||||    
T  28699760 caaagatgagttcaaggaagcaattatctactaagctatttgcaatgcgagactaaaaagacttgtttgggacttttgaaacttaaaggaccac 28699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 50364953 - 50364860
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||||| |||  ||||||||||||||| ||||||| ||||||||| ||||||    
T  50364953 caaagatgagttcaaggaagcaattaccaactatgttatctacaatgcaagacaaaaaggacttgtttgagacttttgaaacttaaatgaccac 50364860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 42641244 - 42641157
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaag 98  Q
    ||||| |||||||||||||||||||| ||| |  ||||| |||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  42641244 caaagatgagttcaaggaagcaattaccaacttggctatatacaatgcgagactaaaaggatttgtttgagacttttaaaacttaaag 42641157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 47895899 - 47895819
Alignment:
Q  184 aatatcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggggttatgtctataaaagactt 264  Q
    |||||||||||||||||| ||||||| |||||||||| |||  ||||||||||||||| ||||| ||| |||  |||||||    
T  47895899 aatatcatttctcttttaaattttatcaatcatgtgtgtgttcaaataaattttatttagggttgtgtttatgcaagactt 47895819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 12748466 - 12748548
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||           |||||||||||| ||||||| ||||||||||||||||    
T  12748466 caaagatgagttcaaggaagcaattaccaactatgctatctacaat-----------aggacttgtttgagacttttgaaacttaaaggaccac 12748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 47329170 - 47329128
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  47329170 attaaaaggacttgtttgagacttttgaaacttaaaggaccac 47329128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1017119 - 1017164
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1017119 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 1017164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 1448940 - 1448977
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| |||||||||||||||||||||    
T  1448940 taaaaggacttgtttgagacttttaaaacttaaaggac 1448977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1687726 - 1687771
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1687726 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 1687771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19664616 - 19664661
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  19664616 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 19664661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 20760137 - 20760092
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  20760137 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 20760092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 20913820 - 20913775
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||    
T  20913820 caaagatgagttcaaagaagcaattatcaactatgctatctacaat 20913775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 20921938 - 20921893
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||    
T  20921938 caaagatgagttcaaagaagcaattatcaactatgctatctacaat 20921893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21564571 - 21564616
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  21564571 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 21564616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 22852071 - 22852116
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  22852071 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 22852116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 27070805 - 27070760
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  27070805 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 27070760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31122737 - 31122782
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  31122737 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 31122782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35346537 - 35346492
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  35346537 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 35346492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 38446551 - 38446596
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  38446551 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 38446596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 42107092 - 42107055
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42107092 taaaaggacttgtttgtgacttttgaaacttaaaggac 42107055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 55164181 - 55164136
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  55164181 caaagatgagttcaaggaagcaattagcaactatgctatctacaat 55164136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 10618688 - 10618728
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  10618688 taaaaggacttgtttgggacttttgaaacttaaaggaccac 10618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 21656666 - 21656706
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  21656666 taaaaggacttgtttgggacttttgaaacttaaaggaccac 21656706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 26455657 - 26455701
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  26455657 caaagatgagttcaaggaagcaattaccaactatgctatctacaa 26455701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 35346464 - 35346424
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35346464 taaaaggacttgtttgggacttttgaaacttaaaggaccac 35346424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 36315037 - 36314993
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||    
T  36315037 aaagatgagttcaaggaagcaattaccaactatgctatctacaat 36314993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 50977797 - 50977757
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  50977797 taaaaggacttgtttgagacttttgaaacttaaaggaccac 50977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 51080929 - 51080889
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  51080929 taaaaggacttgtttgagacttttgaaacttaaaggaccac 51080889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 20813507 - 20813464
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctaca 54  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  20813507 caaagatgagttcaaggaagcaattaccaattatgctatctaca 20813464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 35346671 - 35346710
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  35346671 attaaaaggacttgtttgggacttttgaaacttaaaggac 35346710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 19664443 - 19664405
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  19664443 aaaggacttgtttgggacttttgaaacttaaaggaccac 19664405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 32651059 - 32651097
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  32651059 aaaggacttgtttgagacttttgaaacttaaaggaccac 32651097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 47329241 - 47329199
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctac 53  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  47329241 caaagatgagttcaaggaagcaattaccaactatgctatctac 47329199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 1016977 - 1016940
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  1016977 taaaaggacttgtttgggacttttgaaacttaaaggac 1016940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 20086380 - 20086339
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  20086380 caaagatgagttcaaggaagcaattaccaagtatgctatcta 20086339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 20760279 - 20760316
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  20760279 taaaaggacttgtttgagacttttgaaacttaaaggac 20760316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 21656593 - 21656638
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  21656593 caaagatgagttcaaggaagcaattaccaactatgctatatacaat 21656638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 21890103 - 21890066
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  21890103 taaaaggacttgtttgagacttttgaaacttaaaggac 21890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 21890245 - 21890286
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||||||||||||| |||||||| ||||||    
T  21890245 caaagatgagttcaaggaagcaattaccaaatatgttatcta 21890286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 27070732 - 27070695
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  27070732 taaaaggacttgtttgagacttttgaaacttaaaggac 27070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 32650886 - 32650845
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  32650886 caaagatgagttcaaggaagcaattaccaactatgctatcta 32650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 33151844 - 33151881
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  33151844 taaaaggacttgtttgggacttttgaaacttaaaggac 33151881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35608197 - 35608152
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  35608197 caaagatgagttcaaggaaccaattaccaattatgctatctacaat 35608152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 39069660 - 39069623
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  39069660 taaaaggacttgtttgagacttttgaaacttaaaggac 39069623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 40922231 - 40922186
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  40922231 caaagatgagttcaaggaagtaattaccaactatgctatctacaat 40922186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 41250961 - 41251006
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  41250961 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 41251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 44798342 - 44798387
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  44798342 caaagatgagttcaagaaagcaattaccaactatgctatctacaat 44798387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 3697294 - 3697330
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  3697294 taaaaggacttatttgagacttttaaaacttaaagga 3697330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 12748324 - 12748284
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||| ||||    
T  12748324 taaaaggacttgtttgagacttttgaaacttaaaggtccac 12748284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 20086307 - 20086267
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  20086307 taaaagaacttgtttgagacttttgaaacttaaaggaccac 20086267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 20813434 - 20813394
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  20813434 taaaaggacttgtttaggacttttgaaacttaaaggaccac 20813394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 21564644 - 21564684
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  21564644 taaaatgacttgtttgggacttttgaaacttaaaggaccac 21564684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 26455730 - 26455770
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  26455730 taaaaggacttggttgagacttttgaaacttaaaggaccac 26455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 28699618 - 28699578
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  28699618 taaaaggacttgtttaggacttttgaaacttaaaggaccac 28699578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 37248104 - 37248144
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  37248104 taaaagtacttgtttgagacttttgaaacttaaaggaccac 37248144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40922158 - 40922118
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  40922158 taaaaggacttgtttgagacttttgaaacttaaaagaccac 40922118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 47473163 - 47473123
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  47473163 taaaaggacttgttttggacttttgaaacttaaaggaccac 47473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 50365095 - 50365131
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  50365095 taaaaggacttgtttgagacttttgaaacttaaagga 50365131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 51475456 - 51475496
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  51475456 taaaaggacttgtttggaacttttgaaacttaaaggaccac 51475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 53196161 - 53196201
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  53196161 taaaatgacttgtttgagacttttgaaacttaaaggaccac 53196201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 3797589 - 3797495
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtg-acttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||    
T  3797589 caaagatgagttcaaggaagcaattatcaactatgctatctacaatgtgagactaaaaggacttgtttgagaacttttgaaacttaaaggaccac 3797495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 37354329 - 37354239
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||| ||||||||| |||||||||| ||| ||||||||||||||||  ||| ||||| |||||| ||| || |||| |||||||||||||    
T  37354329 caaagatgagttcaatgaagcaattaccaactatgctatctacaatgtaagactaaaatgacttgcttgggatttttgaaacttaaaggac 37354239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 27774189 - 27774234
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaatgcgaga 62  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  27774189 tgagttcaaggaagcaattaccaactatgctatctacaatgcgaga 27774234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 7336141 - 7336180
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7336141 tgagttcaaggaagcaattatcaactatgctatctacaat 7336180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 1469559 - 1469514
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  1469559 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 1469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 8162778 - 8162733
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  8162778 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 8162733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11050327 - 11050282
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||    
T  11050327 caaagatgaattcaaggaagcaattaccaaatatgctatctacaat 11050282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11476622 - 11476577
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  11476622 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 11476577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 23842380 - 23842425
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  23842380 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 23842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30798434 - 30798389
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  30798434 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 30798389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 33884394 - 33884439
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  33884394 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 33884439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35600188 - 35600143
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  35600188 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 35600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 43752842 - 43752797
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  43752842 caaagatgagttcaaggaagcaattaccaattatgctatctacaat 43752797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 44544484 - 44544529
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  44544484 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 44544529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 47219220 - 47219265
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  47219220 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 47219265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1469701 - 1469741
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  1469701 taaaaggacttgtttgggacttttgaaacttaaaggaccac 1469741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 11476549 - 11476509
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  11476549 taaaaggacttgtttgggacttttgaaacttaaaggaccac 11476509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 30876192 - 30876152
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  30876192 taaaaggacttgtttgagacttttgaaacttaaaggaccac 30876152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 30876407 - 30876447
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  30876407 taaaaggacttgtttgggacttttgaaacttaaaggaccac 30876447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 31684127 - 31684087
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  31684127 taaaaggacttgtttgggacttttgaaacttaaaggaccac 31684087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 31684342 - 31684382
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  31684342 taaaaggacttgtttgggacttttgaaacttaaaggaccac 31684382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 37393991 - 37393951
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  37393991 taaaaggacttgtttgggacttttgaaacttaaaggaccac 37393951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 43968467 - 43968507
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  43968467 taaaaggacttgtttgggacttttgaaacttaaaggaccac 43968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 47119924 - 47119884
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  47119924 taaaaggacttgtttgggacttttgaaacttaaaggaccac 47119884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 41113458 - 41113497
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  41113458 tgagttcaaggaagcaattaccaactatgctatctacaat 41113497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 43752769 - 43752730
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  43752769 taaaaggacttgtttgggacttttgaaacttaaaggacca 43752730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 11050252 - 11050214
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  11050252 aaaggacttgtttgggacttttgaaacttaaaggaccac 11050214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 11476795 - 11476833
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  11476795 aaaggacttttttgggacttttaaaacttaaaggaccac 11476833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 37394236 - 37394274
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  37394236 aaaggacttgtttgggacttttgaaacttaaaggaccac 37394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 44544342 - 44544304
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacc 102  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  44544342 taaaaggacttgtttgagacttttgaaacttaaaggacc 44544304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 221350 - 221395
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  221350 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 221395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 2960706 - 2960661
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  2960706 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 2960661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 11050500 - 11050537
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  11050500 aaaggacttgtttgggacttttgaaacttaaaggacca 11050537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 11476764 - 11476801
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  11476764 taaaaggacttgtttgggacttttgaaacttaaaggac 11476801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 29248417 - 29248462
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  29248417 caaagatgagttcaaggaatcaattaccaactatgctatctacaat 29248462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 31684200 - 31684155
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| ||| |||||||||||    
T  31684200 caaagatgagttcaaggaagcaattaccaactattctatctacaat 31684155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 31793827 - 31793864
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  31793827 taaaaggacttgtttgggacttttgaaacttaaaggac 31793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 37394064 - 37394019
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||||||| || ||| |||||||||||||||    
T  37394064 caaagatgagttcaaggaagcaactaccaactatgctatctacaat 37394019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 38427629 - 38427588
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  38427629 caaagatgagttcaaggaagcaattaccaactatgctatcta 38427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 40851216 - 40851179
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  40851216 taaaaggacttgtttgagacttttgaaacttaaaggac 40851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 42979546 - 42979583
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  42979546 taaaaggacttgtttgagacttttgaaacttaaaggac 42979583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 43968325 - 43968280
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| || ||||||||||||    
T  43968325 caaagatgagttcaaggaagcaattaccaactacgctatctacaat 43968280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 45233666 - 45233703
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  45233666 taaaaggacttgtttgagacttttgaaacttaaaggac 45233703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 47219078 - 47219041
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  47219078 taaaaggacttgtttgggacttttgaaacttaaaggac 47219041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 47272056 - 47272101
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  47272056 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 47272101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 47281190 - 47281145
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  47281190 caaagatgagttcaaggaagcaattaccaactatggtatctacaat 47281145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 47294284 - 47294247
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  47294284 taaaaggacttgtttgggacttttgaaacttaaaggac 47294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 47294357 - 47294312
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| |||  ||||||||||||||    
T  47294357 caaagatgagttcaaggaagcaattaccaacgatgctatctacaat 47294312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 48628953 - 48628990
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  48628953 taaaaggacttgtttgagacttttgaaacttaaaggac 48628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 2960633 - 2960593
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  2960633 taaaatgacttgtttgggacttttgaaacttaaaggaccac 2960593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 2960793 - 2960829
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  2960793 taaaaggacttgtttgagacttttgaaacttaaagga 2960829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 25801559 - 25801519
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  25801559 taaaaggacttgtttaggacttttgaaacttaaaggaccac 25801519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 27364332 - 27364292
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  27364332 taaaaggatttgtttgaaacttttaaaacttaaaggaccac 27364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 35600115 - 35600075
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||| |||| ||||||| ||||||||||||||||    
T  35600115 taaaaggacttatttgagacttttgaaacttaaaggaccac 35600075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40520820 - 40520780
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  40520820 taaaaggacttgtttgagactttcgaaacttaaaggaccac 40520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 41113525 - 41113565
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  41113525 taaaatgacttgtttgagacttttgaaacttaaaggaccac 41113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 43968252 - 43968212
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  43968252 taaaaggacttgtttgtgacctttgaaacttaaatgaccac 43968212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 44551007 - 44551047
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||| |||||| ||||||| ||||||||||||||||    
T  44551007 taaaaggacgtgtttgagacttttgaaacttaaaggaccac 44551047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 16752191 - 16752284
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||    
T  16752191 caaagatgagttcaaggaagcaattaccaactatgttatctacaatgcgagactaaaaggacttgtttgagacttttgaaacttaaagaaccac 16752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 26035412 - 26035319
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||||| ||| |||| |||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||    
T  26035412 caaagatgagttcaagaaagcaattaccaactatggtatctacaatgcaagactaaaaggacttgtttgggacttttgaaatttaaaggaccac 26035319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 445029 - 445122
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||||| ||| ||||||||||||||||| ||| ||||| ||||||||||  |||||| ||| ||||||||||||    
T  445029 caaagatgagttcaagaaagcaattaccaactatgctatctacaatgcaagactaaaaagacttgtttggaacttttgaaatttaaaggaccac 445122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 35342255 - 35342301
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatg 57  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  35342255 caaagatgagttcaaggaagcaattatcaactatgctatctacaatg 35342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 38844082 - 38843993
Alignment:
Q  169 taatttagtcacatcaat---atcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggggttatgtctata 256  Q
    ||||||||||||||||||   |||||| |||||||| |||||||||||||||||| ||| |||||||| || || |||| || ||||||||    
T  38844082 taatttagtcacatcaattaaatcatt-ctcttttaaattttataaatcatgtgtatgtctaaataaacttcatctgggtttgtgtctata 38843993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6600202 - 6600157
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  6600202 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 6600157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11000794 - 11000749
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  11000794 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 11000749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 14717680 - 14717725
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  14717680 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 14717725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 27116330 - 27116371
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  27116330 ttaaaaggacttgtttgggacttttgaaacttaaaggaccac 27116371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 38964180 - 38964135
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  38964180 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 38964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 39002091 - 39002046
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  39002091 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 39002046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 41282417 - 41282462
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  41282417 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 41282462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42993593 - 42993638
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  42993593 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 42993638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 6600129 - 6600089
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  6600129 taaaaggacttgtttgggacttttgaaacttaaaggaccac 6600089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 11000721 - 11000681
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  11000721 taaaaggacttgtttgagacttttgaaacttaaaggaccac 11000681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 14952257 - 14952217
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  14952257 taaaaggacttgtttgggacttttgaaacttaaaggaccac 14952217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 27457190 - 27457150
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  27457190 taaaaggacttgtttgagacttttgaaacttaaaggaccac 27457150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 28078398 - 28078358
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  28078398 taaaaggacttgtttgggacttttgaaacttaaaggaccac 28078358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 31710430 - 31710470
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  31710430 taaaaggacttgtttgagacttttgaaacttaaaggaccac 31710470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 42993451 - 42993415
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||||||||||| ||||||||||||    
T  42993451 taaaaggacttgtttgtgacttttgaaacttaaagga 42993415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 1052614 - 1052653
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  1052614 tgagttcaaggaagcaattaccaactatgctatctacaat 1052653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 6252053 - 6252092
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  6252053 tgagttcaaggaagcaattaccaactatgctatctacaat 6252092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 8215981 - 8216020
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  8215981 tgagttcaaggaagcaattaccaactatgctatctacaat 8216020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 11692353 - 11692392
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  11692353 attaaaaggacttgtttgagacttttgaaacttaaaggac 11692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 16096020 - 16095981
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  16096020 tgagttcaaggaagcaattaccaactatgctatctacaat 16095981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 20408681 - 20408720
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  20408681 taaaaggacttgtttgggacttttgaaacttaaaggacca 20408720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 27116159 - 27116120
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  27116159 tgagttcaaggaagcaattaccaactatgctatctacaat 27116120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 28078471 - 28078428
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctaca 54  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  28078471 caaagatgagttcaaggaagcaattaccaactatgctatctaca 28078428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 6600375 - 6600413
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  6600375 aaaggacttgtttgggacttttgaaacttaaaggaccac 6600413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 20079496 - 20079534
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  20079496 aaaggacttgtttgggacttttgaaacttaaaggaccac 20079534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 20408435 - 20408397
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  20408435 aaaggacttgtttgggacttttgaaacttaaaggaccac 20408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 23128979 - 23128937
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctac 53  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  23128979 caaagatgagttcaaggaagcaattaccaattatgctatctac 23128937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 31710184 - 31710146
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  31710184 aaaggacttgtttgggacttttgaaacttaaaggaccac 31710146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3352240 - 3352277
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  3352240 aaaggacttgtttgggacttttgaaacttaaaggacca 3352277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 4015940 - 4015895
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  4015940 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 4015895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 6251926 - 6251889
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6251926 taaaaggacttgtttgggacttttgaaacttaaaggac 6251889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 6252120 - 6252157
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6252120 taaaaggacttgtttgagacttttgaaacttaaaggac 6252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 6331310 - 6331273
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6331310 taaaaggacttgtttgggacttttgaaacttaaaggac 6331273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 6332924 - 6332961
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||  |||||||||||||||||||||    
T  6332924 taaaaggacttgtttaggacttttaaaacttaaaggac 6332961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 6600344 - 6600381
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6600344 taaaaggacttgtttgagacttttgaaacttaaaggac 6600381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6740021 - 6739976
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  6740021 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 6739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 8216048 - 8216085
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||||||||||| || |||||||||||||||||||||    
T  8216048 taaaaggacttgtatgggacttttaaaacttaaaggac 8216085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 11692213 - 11692168
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  11692213 caaagatgagttcaaggaagcaattaccaactatgctatctgcaat 11692168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 11935593 - 11935630
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  11935593 taaaaggacttgtttgagacttttgaaacttaaaggac 11935630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 20408466 - 20408429
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  20408466 taaaaggacttgtttgggacttttgaaacttaaaggac 20408429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 27457263 - 27457218
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  27457263 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 27457218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30208468 - 30208423
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  30208468 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 30208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 30297815 - 30297770
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||| ||||||||||||| ||| |||||||||||||||    
T  30297815 caaagatgagttgaaggaagcaattaccaactatgctatctacaat 30297770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 30297957 - 30297994
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  30297957 taaaaggacttgtttgggacttttgaaacttaaaggac 30297994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 33760678 - 33760715
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  33760678 taaaaggacttgtttgggacttttgaaacttaaaggac 33760715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 41282275 - 41282238
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  41282275 taaaaggacttgtttgggacttttgaaacttaaaggac 41282238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 43166335 - 43166290
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  43166335 caaagatgagttcaagaaagcaattaccaactatgctatctacaat 43166290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1052681 - 1052721
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  1052681 taaaaggacttgtttgagacttttgaaacttaaatgaccac 1052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 6739948 - 6739908
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  6739948 taaaagaacttgtttgagacttttgaaacttaaaggaccac 6739908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 14717538 - 14717502
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  14717538 taaaaggacttgtttgagacttttgaaacttaaagga 14717502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 14952399 - 14952443
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||    
T  14952399 caaagatgagttcaaggaagcaattaccaactatgttatctacaa 14952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 20079251 - 20079211
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  20079251 taaaatgacttgtttgagacttttgaaacttaaaggaccac 20079211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 27116092 - 27116052
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  27116092 taaaaggacttgtttgagacttttgaaacttaaaagaccac 27116052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 30863186 - 30863146
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  30863186 taaaacgacttgtttgagacttttgaaacttaaaggaccac 30863146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 39002202 - 39002242
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  39002202 taaaaggacttgtttgggacttttgaaacttaaaagaccac 39002242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 2039 - 1946
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||  |||||| ||||||||| ||||||    
T  2039 caaagatgagttcaaggaagcaattaccaactatgctatctacaatgcgagactaaaagaacttgtttggaacttttgaaacttaaaagaccac 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 2181 - 2221
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  2181 taaaaggacttgtttgggacttttgaaacttaaaggaccac 2221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 33194717 - 33194624
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| ||||||||||||||||| || ||| ||||||||||||||||||||| ||||| |||||||||| ||||||| || |||||||||||||    
T  33194717 caaagatgagttcaaggaagcaactaccaactatgctatctacaatgcgagactaaaatgacttgtttgagacttttgaagcttaaaggaccac 33194624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 30281706 - 30281796
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||| ||||  |||| |||||||||| ||||||| |||||||||||||    
T  30281706 caaagatgagttcaaggaagcaattaccaactatgctatctacaatgtgagaccaaaatgacttgtttgagacttttgaaacttaaaggac 30281796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 48319112 - 48319019
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaatgcgagattaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||||||| ||||| |||||||||  ||||||| ||| ||||||||||||    
T  48319112 caaagatgagttcaaggaagcaattaccaactatgctatatacaatgcgagactaaaaagacttgtttaagacttttgaaatttaaaggaccac 48319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 16506848 - 16506803
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaatgcgaga 62  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  16506848 tgagttcaaggaagcaattaccaactatgctatctacaatgcgaga 16506803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 23646798 - 23646858
Alignment:
Q  184 aatatcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggg 244  Q
    |||||||||| ||||||| ||||||| |||||||||| |||  ||||||||||||||||||    
T  23646798 aatatcatttatcttttaaattttatcaatcatgtgtgtgtccaaataaattttatttggg 23646858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 21929672 - 21929714
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  21929672 attaaaaggacttgtttgagacttttgaaacttaaaggaccac 21929714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 36781378 - 36781420
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  36781378 attaaaaggacttgtttgggacttttgaaacttaaaggaccac 36781420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 5400945 - 5400990
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  5400945 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 5400990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 7651737 - 7651782
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||    
T  7651737 caaagatgagttcaatgaagcaattatcaactatgctatctacaat 7651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 19315715 - 19315760
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  19315715 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 19315760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23228260 - 23228215
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  23228260 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 23228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23767480 - 23767435
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  23767480 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 23767435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 26549463 - 26549508
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  26549463 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 26549508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 40721418 - 40721463
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||    
T  40721418 caaagatgagttcaagaaagcaattatcaactatgctatctacaat 40721463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 41106091 - 41106136
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  41106091 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 41106136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 43396608 - 43396571
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| |||||||||||||||||||||    
T  43396608 taaaaggacttgtttgagacttttaaaacttaaaggac 43396571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 46825606 - 46825651
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  46825606 caaagatgagttcaaggaagcaattaccaattatgctatctacaat 46825651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 49094777 - 49094732
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  49094777 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 49094732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 9962826 - 9962870
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  9962826 caaagatgagttcaaggaagcaattaccaactatgctatctacaa 9962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 19315788 - 19315828
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  19315788 taaaaggacttgtttgggacttttgaaacttaaaggaccac 19315828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 21929602 - 21929646
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||    
T  21929602 aaagatgagttcaaggaagcaattaccaactatgctatctacaat 21929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 33325660 - 33325620
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  33325660 taaaaggacttgtttgagacttttgaaacttaaaggaccac 33325620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 33325875 - 33325915
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  33325875 taaaaggacttgtttgagacttttgaaacttaaaggaccac 33325915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 33673950 - 33673910
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  33673950 taaaagaacttgtttgggacttttaaaacttaaaggaccac 33673910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 36781165 - 36781125
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  36781165 taaaaggacttgtttgagacttttgaaacttaaaggaccac 36781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40721284 - 40721244
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  40721284 taaaaggacttgtttgagacttttgaaacttaaaggaccac 40721244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 44978761 - 44978721
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  44978761 taaaaggacttgtttgggacttttgaaacttaaaggaccac 44978721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 46051525 - 46051569
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  46051525 caaagatgagttcaaggaagcaattaccaactatgctatctacaa 46051569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 46051598 - 46051638
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  46051598 taaaaggacttgtttgggacttttgaaacttaaaggaccac 46051638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 9974923 - 9974962
Alignment:
Q  17 tgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  9974923 tgagttcaaggaagcaattaccaactatgctatctacaat 9974962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 18917609 - 18917644
Alignment:
Q  21 ttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||||||||||||||| ||||||||||||||||||    
T  18917609 ttcaaggaagcaattattaaatatgctatctacaat 18917644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 43396750 - 43396793
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctaca 54  Q
    ||||| |||||||||||||||||||||||| | |||||||||||    
T  43396750 caaagatgagttcaaggaagcaattatcaactctgctatctaca 43396793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 44978826 - 44978791
Alignment:
Q  19 agttcaaggaagcaattatcaaatatgctatctaca 54  Q
    |||||||||||||||||||||| |||||||||||||    
T  44978826 agttcaaggaagcaattatcaattatgctatctaca 44978791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 45350712 - 45350673
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  45350712 attaaaaggacttgtttgagacttttgaaacttaaaggac 45350673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 5400806 - 5400768
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  5400806 attaaaaggacttgtttgagacttttgaaacttaaagga 5400768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 6711589 - 6711627
Alignment:
Q  65 aaaaggacttgtttgtgacttttaaaacttaaaggacca 103  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  6711589 aaaaggacttgtttgagacttttgaaacttaaaggacca 6711627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 9878990 - 9879028
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  9878990 attaaaaggacttgtttgggacttttgaaacttaaagga 9879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 24204530 - 24204492
Alignment:
Q  18 gagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  24204530 gagttcaaggaagcaattaccaactatgctatctacaat 24204492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 25988508 - 25988546
Alignment:
Q  63 ttaaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  25988508 ttaaaaggacttgtttgagacttttgaaacttaaaggac 25988546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 38473865 - 38473903
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  38473865 aaaggacttgtttgggacttttgaaacttaaaggaccac 38473903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 50099122 - 50099084
Alignment:
Q  66 aaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  50099122 aaaggacttgtttgggacttttgaaacttaaaggaccac 50099084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 7553082 - 7553037
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  7553082 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 7553037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 7651810 - 7651847
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  7651810 taaaaggacttgtttgggacttttgaaacttaaaggac 7651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 8141694 - 8141731
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  8141694 taaaaggacttgtttgggacttttgaaacttaaaggac 8141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 12143147 - 12143192
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  12143147 caaagatgagttcaaggaagcaattaccaactatgttatctacaat 12143192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 16508136 - 16508173
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  16508136 taaaaggacttgtttgggacttttgaaacttaaaggac 16508173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 18892404 - 18892449
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  18892404 caaagatgagttcaaagaagcaattaccaactatgctatctacaat 18892449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 22351118 - 22351081
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  22351118 taaaaggacttgtttgggacttttgaaacttaaaggac 22351081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 23615504 - 23615562
Alignment:
Q  184 aatatcatttctcttttagattttataaatcatgtgtttgtgtaaataaattttatttggg 244  Q
    |||||||||| ||||||| ||||||| ||||||||||  ||  ||||||||||||||||||    
T  23615504 aatatcatttatcttttaaattttatcaatcatgtgt--gtccaaataaattttatttggg 23615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 25800576 - 25800539
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  25800576 taaaaggacttgtttgagacttttgaaacttaaaggac 25800539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 25800789 - 25800826
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  25800789 taaaaggacttgtttgggacttttgaaacttaaaggac 25800826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 25988337 - 25988292
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  25988337 caaagatgagttcaaggaaccaattaccaactatgctatctacaat 25988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 26549536 - 26549573
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  26549536 taaaaggacttgtttgagacttttgaaacttaaaggac 26549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 28425356 - 28425319
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  28425356 taaaaggacttgtttgggacttttgaaacttaaaggac 28425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 28425429 - 28425384
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  28425429 caaagatgagttcaaggaagcaattaccaactatgctatctgcaat 28425384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33714427 - 33714382
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||||||| |||| ||||||||||    
T  33714427 caaagatgagttcaaggaaacaattatcaactatgttatctacaat 33714382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 36781238 - 36781193
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  36781238 caaagatgagttcaaggaagcaattaccaactatgatatctacaat 36781193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 37216971 - 37217016
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  37216971 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 37217016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 38473692 - 38473647
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  38473692 caaagatgagttcaaggaagcaattaccaactatgatatctacaat 38473647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 38473834 - 38473871
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  38473834 taaaaggacttgtttgggacttttgaaacttaaaggac 38473871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 43396823 - 43396860
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  43396823 taaaaggacttgtttgagacttttgaaacttaaaggac 43396860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 46095141 - 46095096
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  46095141 caaagatgagttcaaggaaacaattaccaactatgctatctacaat 46095096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 48669462 - 48669417
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||| | ||| |||||||||||||||    
T  48669462 caaagatgagttcaaggaagcaatcaccaactatgctatctacaat 48669417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 48802324 - 48802287
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  48802324 taaaaggacttgtttgggacttttgaaacttaaaggac 48802287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 48802397 - 48802352
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  48802397 caaagatgagttcaatgaagcaattaccaactatgctatctacaat 48802352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 49814375 - 49814416
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  49814375 caaagatgagttcaaggaagcaattaccaactatgctatcta 49814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 50533316 - 50533279
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  50533316 taaaaggacttgtttgagacttttgaaacttaaaggac 50533279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 50690091 - 50690128
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  50690091 taaaaggacttgtttgagacttttgaaacttaaaggac 50690128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 52350132 - 52350169
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  52350132 taaaaggacttgtttgggacttttgaaacttaaaggac 52350169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 5401018 - 5401058
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  5401018 taaaaagacttgtttgagacttttgaaacttaaaggaccac 5401058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 7608831 - 7608791
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatcta 52  Q
    |||| ||||||||| |||||||||||||| |||||||||||    
T  7608831 aaagatgagttcaaagaagcaattatcaactatgctatcta 7608791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 9962899 - 9962939
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||| |||| ||||||| ||||||||||||||||    
T  9962899 taaaaggacttctttgagacttttgaaacttaaaggaccac 9962939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 18917672 - 18917712
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||| | ||||||||||||||||    
T  18917672 taaaaggacttgtttgagacttatgaaacttaaaggaccac 18917712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 19315573 - 19315533
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  19315573 taaaagaacttgtttgagacttttgaaacttaaaggaccac 19315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 21965213 - 21965249
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  21965213 taaaaggacttgtttgggacttttgaaacttaaagga 21965249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 33674093 - 33674137
Alignment:
Q  12 aaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    |||| |||||||||||||||||||| ||  |||||||||||||||    
T  33674093 aaagatgagttcaaggaagcaattaccagctatgctatctacaat 33674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 33674165 - 33674205
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  33674165 taaaaggacttgtttgagacttttgaaacttaaagaaccac 33674205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 36157671 - 36157631
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  36157671 taaaatgacttgtttgagacttttgaaacttaaaggaccac 36157631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 38473619 - 38473579
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  38473619 taaaaggacttgtttgagacttttgaaacttaaagtaccac 38473579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 40721491 - 40721527
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40721491 taaaaggacttgtttgagacttttgaaacttaaagga 40721527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 45670479 - 45670439
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||||||||| |||| ||||||| ||||||||||||||||    
T  45670479 taaaaggacttatttgggacttttgaaacttaaaggaccac 45670439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 45670694 - 45670734
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  45670694 taaaaggacttgtttgagacttttgaaacttaaatgaccac 45670734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 52146926 - 52146886
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  52146926 taaaatgacttgtttgggacttttgaaacttaaaggaccac 52146886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 5333 - 5373
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  5333 taaaaggatttgtttgtgacttttaaaacttaaaggaccac 5373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 5260 - 5304
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaa 55  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  5260 caaagatgagttcaaggaagcaattaacaattatgctatctacaa 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 252646 - 252686
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  252646 taaaaggacttgtttgagacttttaaaacttaaaggaccac 252686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 13170 - 13215
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  13170 caaagatgagttcaaggaaggaattatcaattatgctatctacaat 13215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 13243 - 13283
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  13243 taaaaggacttgtttgggactttcaaaacttaaaagaccac 13283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 59674 - 59629
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  59674 caaagatgagttcaaggaaggaattatcaattatgctatctacaat 59629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 59601 - 59561
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  59601 taaaaggacttgtttgggactttcaaaacttaaaagaccac 59561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 218961 - 219006
Alignment:
Q  11 caaaggtgagttcaaggaagcaattatcaaatatgctatctacaat 56  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  218961 caaagatgagttcaaggaagcaattaccaactatgctatctacaat 219006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 219032 - 219074
Alignment:
Q  62 attaaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||    
T  219032 attaaaaggacttgtttgggacttttgaaacttaaaagaccac 219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 218818 - 218778
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  218818 taaaatgacttgtttgagacttttgaaacttaaaggaccac 218778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 5748 - 5785
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  5748 taaaaggacttgtttgggacttttgaaacttaaaggac 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 14582 - 14545
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggac 101  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  14582 taaaaggacttgtttgggacttttgaaacttaaaggac 14545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 5020 - 4980
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaaggaccac 104  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  5020 taaaaggacttgttttggacttttgaaacttaaaggaccac 4980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 11298 - 11262
Alignment:
Q  64 taaaaggacttgtttgtgacttttaaaacttaaagga 100  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  11298 taaaaggacttgtttgagacttttgaaacttaaagga 11262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University