View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3765_high_31 (Length: 256)
Name: NF3765_high_31
Description: NF3765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3765_high_31 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 256
Target Start/End: Original strand, 29149395 - 29149648
Alignment:
| Q |
10 |
agatgaattaaaagggttcaagagaacaagcgagaagggagactggtgtcttgtgaaaggtgtggttgata----cgtgtgatataatgctgttaagaat |
105 |
Q |
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| T |
29149395 |
agatgaattagaagggttaaagagaacaagcgagaagggagactggtgtcttgtgaaaggtgtggttgatatatacgtgtgatataatgctgttaagaat |
29149494 |
T |
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| Q |
106 |
tcaacctgatccaactttctctttactcatgtggtcctcacttgtgatgttagtaatgtaataattagtatgtccaaaaatggacaagcacaacatgcag |
205 |
Q |
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| T |
29149495 |
tcaacctgatccaactctgtcgttactcatgtggtcctcacttgtgatgttagtaatgtaataattagtatgtccaaaaatggacaagcacaacatgcag |
29149594 |
T |
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| Q |
206 |
ctgtgataaatgt---tggtacaaaatgaaggactcgttaatgtcattgtgcaa |
256 |
Q |
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| T |
29149595 |
ctgtgataaatgttagtggtacaaaatgaaggactcgttaatgtcattgtgcaa |
29149648 |
T |
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