View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3765_low_13 (Length: 410)
Name: NF3765_low_13
Description: NF3765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3765_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 37488343 - 37487944
Alignment:
| Q |
1 |
tggtgacattggttgaggggatttgtaagataccagatcaagtgaacatgaacaagtttgtgggtgagatagtgaattttgtttgtgaagattgggtggt |
100 |
Q |
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| T |
37488343 |
tggtgacactggttgaggggatttgtaagagaccagatcaagtgaacatgaacaagttggtgggtgagatagtgaatttggtttgtgaagattgggtggt |
37488244 |
T |
|
| Q |
101 |
gatagaaactgtggtgattgttgaagtgaatgagtttaaggagagattagggtgtatggaatttggagaagctgttgaattggtttgttgtttgaagagg |
200 |
Q |
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| T |
37488243 |
gatagaaactgtggtgattgttgaagtgaatgagtttaaggagagattagggtgtttggaatttggagaagctgttgaattggtttgttgtttgaagagg |
37488144 |
T |
|
| Q |
201 |
ttggaagagtgtaaagagagggtggtgatgattttggagtcacaacaggggttgtgggattcggtgagagaggtgaaggataaggttggaatggaggtgt |
300 |
Q |
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| T |
37488143 |
ttggaagagtgtaaggagagggtggtgatgattttggagtcacaacaggggttatgggattcggtgagagaggtgaaggataaggttggtatggaggtgt |
37488044 |
T |
|
| Q |
301 |
ataaggaaaagggtaaggtgcataaggagggaagaaagtcaaggtttagtgagtctgatcggttttctgctagagttataagttctcgtgattccctttg |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37488043 |
ataaggaaaagggtaaggtgcataaggagggaagaaagtcaaggtttagtgagtctgatcggttttctgctagagttatcagttctcgtgattccctttg |
37487944 |
T |
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