View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3765_low_14 (Length: 405)
Name: NF3765_low_14
Description: NF3765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3765_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 25 - 390
Target Start/End: Complemental strand, 41403649 - 41403294
Alignment:
| Q |
25 |
accaccaatgtctatatctcttagaaatttgagtaatgcatttttctccacattaattacctccaaaacatcatcattgtttttgaatttaattgaaatg |
124 |
Q |
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| T |
41403649 |
accaccaatgtctatatctcttagaaatttgagtaatgcattcttctccacattaattacctccaaaacatcatcattgtttttgaatttaattgaaatg |
41403550 |
T |
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| Q |
125 |
tctctgttaagggaaccttgatccgttgttgtcttgacatctttcttctgatgaagtccattcccactactagcctgacctttagcatttgatatttctc |
224 |
Q |
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| T |
41403549 |
tctctgttaagggaaccttgatctgttgttgtattgacatctttcttctgatgaagtgcattcccactactagcctgacctttagcatttgatatttctc |
41403450 |
T |
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| Q |
225 |
tatgttgacttacctgatatttatattttatatttgattcaaccacaattattatatacaatacaataattctaaataattcttttatttatttgttggt |
324 |
Q |
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| T |
41403449 |
tatgttgacttacctgatatttatattttatattagattcaaccacaattattatatacaatacaataa----------ttcttttatttatttgttggt |
41403360 |
T |
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| Q |
325 |
gtgaccataaaatataatcatgaatctttaaacatacctttagggattctgcatctgtaactgcat |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41403359 |
gtgaccataaaatataatcatgaatctttaaacatacctttagggattctgcatctgtaactgcat |
41403294 |
T |
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