View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3765_low_27 (Length: 313)
Name: NF3765_low_27
Description: NF3765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3765_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 13 - 300
Target Start/End: Complemental strand, 37488688 - 37488401
Alignment:
| Q |
13 |
ttatggaccgtcttcagaacaccaacaacgccgccgttgcactcaagtctctcatcatcgttcatcatatcatcagccatgggagcttcatacttcaaga |
112 |
Q |
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| T |
37488688 |
ttatggaccgtcttcagaacaccaacaacgccgccgttgcactcaagtctctcatcatcgttcatcatatcatcagccatggtagcttcatacttcaaga |
37488589 |
T |
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| Q |
113 |
tcagttatctgtttacccttcaaccggtggtagaaactatcttaacctctcgaattttcgacataatacaaatccaacttcctgggaactttcttgttgg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37488588 |
tcagttatctgtttacccttcaaccggtggtagaaactatcttaacctctcgaattttcgacataatacaaatccaacttcctgggaactttcttgttgg |
37488489 |
T |
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| Q |
213 |
gtacgttggtttgctcaacatattgagaatcttttatgtacttcacgaatcttgggtttcttctttcttggaaagtctttgtgtgatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37488488 |
gtacgttggtttgctcaacatattgagaatcttttatgtacttcacgaatcttgggtttcttctttcttggaaagtctttgtgtgatg |
37488401 |
T |
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