View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3765_low_40 (Length: 208)

Name: NF3765_low_40
Description: NF3765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3765_low_40
NF3765_low_40
[»] chr2 (79 HSPs)
chr2 (18-192)||(1494422-1494596)
chr2 (20-71)||(787373-787424)
chr2 (20-76)||(33256776-33256832)
chr2 (21-76)||(11063524-11063579)
chr2 (18-76)||(4350726-4350784)
chr2 (32-90)||(27237883-27237941)
chr2 (20-102)||(35378994-35379076)
chr2 (20-73)||(43065428-43065481)
chr2 (25-73)||(1647275-1647323)
chr2 (20-76)||(3067357-3067413)
chr2 (100-140)||(25609741-25609781)
chr2 (20-76)||(31096337-31096393)
chr2 (20-91)||(15120204-15120275)
chr2 (21-76)||(33576574-33576629)
chr2 (18-73)||(35538667-35538722)
chr2 (18-73)||(35557101-35557156)
chr2 (25-76)||(44606093-44606144)
chr2 (26-76)||(680539-680589)
chr2 (34-76)||(4326385-4326427)
chr2 (23-73)||(10285899-10285949)
chr2 (25-71)||(33192243-33192289)
chr2 (26-76)||(33580540-33580590)
chr2 (20-101)||(43570425-43570506)
chr2 (25-74)||(5902532-5902581)
chr2 (39-75)||(10285392-10285428)
chr2 (23-63)||(12215856-12215896)
chr2 (29-73)||(14451037-14451081)
chr2 (26-70)||(26281865-26281909)
chr2 (20-76)||(32364709-32364765)
chr2 (18-102)||(34652012-34652096)
chr2 (21-73)||(41809224-41809276)
chr2 (21-73)||(43456686-43456738)
chr2 (29-73)||(44438826-44438870)
chr2 (21-76)||(9595294-9595349)
chr2 (32-75)||(10563548-10563591)
chr2 (22-73)||(30538153-30538204)
chr2 (20-58)||(1318290-1318328)
chr2 (20-58)||(1801722-1801760)
chr2 (36-78)||(6547936-6547978)
chr2 (21-63)||(9878661-9878703)
chr2 (18-60)||(16398447-16398489)
chr2 (25-71)||(29430799-29430845)
chr2 (26-76)||(43529842-43529892)
chr2 (21-58)||(750505-750542)
chr2 (20-73)||(1830084-1830137)
chr2 (25-74)||(2091017-2091066)
chr2 (20-65)||(4550794-4550839)
chr2 (20-76)||(5759553-5759609)
chr2 (18-63)||(9478348-9478393)
chr2 (21-102)||(9530708-9530788)
chr2 (20-73)||(13056176-13056229)
chr2 (20-73)||(14316123-14316176)
chr2 (21-58)||(14844993-14845030)
chr2 (20-76)||(16451154-16451211)
chr2 (20-77)||(17380603-17380660)
chr2 (103-140)||(17952789-17952826)
chr2 (26-75)||(18179224-18179273)
chr2 (20-73)||(18884906-18884959)
chr2 (20-69)||(18962015-18962064)
chr2 (20-73)||(28677637-28677690)
chr2 (103-140)||(31461383-31461420)
chr2 (103-140)||(32098396-32098433)
chr2 (32-73)||(32821848-32821889)
chr2 (103-140)||(33197327-33197364)
chr2 (21-58)||(37518837-37518874)
chr2 (25-70)||(40158760-40158805)
chr2 (21-58)||(41065779-41065816)
chr2 (23-76)||(41170550-41170603)
chr2 (20-76)||(41293140-41293197)
chr2 (33-73)||(1939323-1939363)
chr2 (40-76)||(7103480-7103516)
chr2 (20-56)||(9556295-9556331)
chr2 (20-76)||(11307348-11307404)
chr2 (19-102)||(11513908-11513989)
chr2 (21-73)||(17221519-17221571)
chr2 (38-102)||(33942160-33942224)
chr2 (20-76)||(35378510-35378566)
chr2 (21-57)||(41851143-41851179)
chr2 (25-73)||(43827936-43827984)
[»] chr1 (73 HSPs)
chr1 (21-76)||(11639395-11639450)
chr1 (18-76)||(4481966-4482024)
chr1 (18-75)||(4202128-4202184)
chr1 (25-73)||(4699598-4699646)
chr1 (18-102)||(37811862-37811946)
chr1 (20-76)||(39270403-39270459)
chr1 (33-76)||(4622129-4622172)
chr1 (20-75)||(38170668-38170723)
chr1 (21-140)||(46499853-46499979)
chr1 (23-73)||(24968397-24968447)
chr1 (23-73)||(25432250-25432300)
chr1 (25-91)||(35925711-35925777)
chr1 (31-76)||(6292529-6292574)
chr1 (22-79)||(17628632-17628689)
chr1 (18-91)||(27140499-27140572)
chr1 (19-76)||(28689429-28689486)
chr1 (33-73)||(27963361-27963401)
chr1 (20-76)||(44422735-44422791)
chr1 (25-76)||(1565518-1565569)
chr1 (19-73)||(19412574-19412628)
chr1 (19-73)||(34380484-34380538)
chr1 (18-76)||(38867807-38867865)
chr1 (18-63)||(5591942-5591987)
chr1 (20-73)||(6262777-6262830)
chr1 (20-73)||(7262496-7262549)
chr1 (30-75)||(10854770-10854815)
chr1 (27-76)||(11695897-11695946)
chr1 (20-76)||(11941298-11941355)
chr1 (28-73)||(12477273-12477318)
chr1 (32-73)||(26184787-26184828)
chr1 (20-73)||(43029380-43029433)
chr1 (25-76)||(3887614-3887666)
chr1 (28-76)||(10199394-10199442)
chr1 (36-76)||(20713692-20713732)
chr1 (26-74)||(24460391-24460439)
chr1 (20-76)||(30815631-30815687)
chr1 (20-76)||(31517718-31517774)
chr1 (28-76)||(37593670-37593718)
chr1 (19-58)||(17631079-17631118)
chr1 (21-56)||(27145977-27146012)
chr1 (20-74)||(10744339-10744393)
chr1 (39-73)||(16981933-16981967)
chr1 (22-76)||(25479617-25479671)
chr1 (36-74)||(27887112-27887150)
chr1 (24-54)||(34536216-34536246)
chr1 (18-64)||(48282172-48282218)
chr1 (20-73)||(10439725-10439778)
chr1 (20-73)||(12564852-12564905)
chr1 (20-73)||(15579521-15579574)
chr1 (39-92)||(21002180-21002233)
chr1 (32-73)||(29723528-29723569)
chr1 (20-73)||(29929599-29929652)
chr1 (33-102)||(35080060-35080129)
chr1 (25-74)||(37842338-37842387)
chr1 (20-69)||(38001639-38001688)
chr1 (25-102)||(43338126-43338203)
chr1 (20-73)||(44031977-44032030)
chr1 (20-76)||(47498816-47498873)
chr1 (103-140)||(50319237-50319274)
chr1 (20-76)||(1662609-1662665)
chr1 (20-72)||(4549888-4549940)
chr1 (25-73)||(4768812-4768860)
chr1 (28-76)||(4920756-4920804)
chr1 (21-73)||(6262059-6262111)
chr1 (21-73)||(15581293-15581345)
chr1 (26-73)||(15942731-15942779)
chr1 (21-73)||(17420242-17420294)
chr1 (20-56)||(27145598-27145634)
chr1 (25-73)||(31118082-31118130)
chr1 (32-68)||(35350684-35350720)
chr1 (25-73)||(45394154-45394202)
chr1 (26-73)||(47960607-47960655)
chr1 (18-54)||(49692028-49692064)
[»] chr8 (53 HSPs)
chr8 (19-102)||(11569434-11569517)
chr8 (20-73)||(14949905-14949958)
chr8 (20-76)||(26473730-26473786)
chr8 (19-63)||(29168642-29168686)
chr8 (20-69)||(26410323-26410372)
chr8 (20-73)||(29169914-29169967)
chr8 (21-74)||(35220702-35220755)
chr8 (25-73)||(3254264-3254312)
chr8 (21-73)||(9835879-9835931)
chr8 (20-79)||(9540974-9541033)
chr8 (18-76)||(7111304-7111362)
chr8 (18-76)||(9700037-9700095)
chr8 (19-73)||(11183584-11183638)
chr8 (26-76)||(12972894-12972944)
chr8 (18-76)||(30389135-30389193)
chr8 (18-64)||(30987967-30988013)
chr8 (20-73)||(5088891-5088944)
chr8 (19-76)||(11415190-11415247)
chr8 (28-73)||(42215292-42215337)
chr8 (19-91)||(3090167-3090239)
chr8 (20-76)||(8066748-8066804)
chr8 (25-73)||(10383924-10383972)
chr8 (17-73)||(12361231-12361287)
chr8 (20-76)||(13459681-13459737)
chr8 (37-128)||(20672729-20672825)
chr8 (26-74)||(39551193-39551241)
chr8 (19-102)||(6966895-6966978)
chr8 (17-76)||(7008635-7008694)
chr8 (18-76)||(10120792-10120851)
chr8 (26-73)||(10722663-10722710)
chr8 (25-76)||(12851212-12851263)
chr8 (18-73)||(30259153-30259208)
chr8 (20-62)||(7918424-7918466)
chr8 (37-103)||(11795101-11795167)
chr8 (18-76)||(31875571-31875629)
chr8 (26-84)||(41620275-41620333)
chr8 (103-141)||(44348431-44348469)
chr8 (20-58)||(45071428-45071466)
chr8 (103-140)||(1470944-1470981)
chr8 (20-76)||(1930071-1930128)
chr8 (20-73)||(2458544-2458597)
chr8 (20-77)||(2487986-2488043)
chr8 (20-73)||(6950361-6950414)
chr8 (38-91)||(25869262-25869315)
chr8 (20-76)||(32840963-32841020)
chr8 (20-76)||(33808339-33808396)
chr8 (23-76)||(43368681-43368734)
chr8 (18-73)||(21130653-21130706)
chr8 (38-102)||(21653091-21653155)
chr8 (18-73)||(33940057-33940112)
chr8 (20-76)||(34290905-34290961)
chr8 (23-63)||(39049321-39049361)
chr8 (103-143)||(40728506-40728546)
[»] chr6 (68 HSPs)
chr6 (21-76)||(28641728-28641783)
chr6 (25-71)||(696483-696529)
chr6 (20-73)||(2027384-2027437)
chr6 (25-76)||(1575931-1575982)
chr6 (25-76)||(31624126-31624177)
chr6 (18-73)||(32171359-32171414)
chr6 (18-73)||(32577962-32578017)
chr6 (20-73)||(1669776-1669829)
chr6 (20-73)||(2034424-2034477)
chr6 (19-76)||(33832250-33832307)
chr6 (21-73)||(738659-738711)
chr6 (20-76)||(8183181-8183237)
chr6 (25-72)||(696642-696689)
chr6 (21-76)||(9027614-9027669)
chr6 (22-65)||(30865800-30865843)
chr6 (20-62)||(2767727-2767769)
chr6 (20-58)||(31338030-31338068)
chr6 (20-73)||(5566155-5566208)
chr6 (20-76)||(9912168-9912225)
chr6 (20-73)||(20377898-20377951)
chr6 (20-73)||(22743520-22743573)
chr6 (21-70)||(30863288-30863337)
chr6 (18-83)||(34939542-34939607)
chr6 (20-73)||(34939783-34939836)
chr6 (20-76)||(821835-821891)
chr6 (25-76)||(1575786-1575838)
chr6 (21-73)||(7931705-7931757)
chr6 (20-64)||(32917245-32917289)
chr6 (20-76)||(34404703-34404759)
chr6 (18-73)||(725631-725686)
chr6 (29-76)||(11600861-11600908)
chr6 (38-73)||(28467862-28467897)
chr6 (18-73)||(34538194-34538249)
chr6 (38-73)||(34735836-34735871)
chr6 (31-73)||(283134-283176)
chr6 (25-63)||(769187-769225)
chr6 (19-73)||(1810282-1810336)
chr6 (21-71)||(3775107-3775157)
chr6 (21-83)||(4006743-4006805)
chr6 (20-58)||(6310228-6310266)
chr6 (20-58)||(9041438-9041476)
chr6 (20-74)||(10616519-10616573)
chr6 (20-74)||(10616691-10616745)
chr6 (20-58)||(27857412-27857450)
chr6 (21-63)||(32976027-32976069)
chr6 (103-140)||(2514647-2514684)
chr6 (32-73)||(3738108-3738149)
chr6 (21-58)||(4248988-4249025)
chr6 (32-73)||(7785734-7785775)
chr6 (18-76)||(8348260-8348320)
chr6 (32-73)||(9667975-9668016)
chr6 (36-73)||(30784595-30784632)
chr6 (20-73)||(31958562-31958615)
chr6 (23-76)||(32386087-32386140)
chr6 (19-76)||(33089542-33089599)
chr6 (21-73)||(2458941-2458993)
chr6 (21-73)||(3155214-3155266)
chr6 (22-74)||(4246448-4246500)
chr6 (21-73)||(4420682-4420734)
chr6 (20-75)||(9093533-9093589)
chr6 (36-76)||(13908499-13908539)
chr6 (20-76)||(20368158-20368214)
chr6 (100-140)||(21959673-21959713)
chr6 (36-76)||(27894082-27894122)
chr6 (100-140)||(29940741-29940781)
chr6 (25-73)||(30523976-30524024)
chr6 (21-73)||(33498658-33498710)
chr6 (25-73)||(34544127-34544175)
[»] scaffold0072 (1 HSPs)
scaffold0072 (25-73)||(4998-5046)
[»] chr3 (68 HSPs)
chr3 (21-73)||(27290880-27290932)
chr3 (22-102)||(48048962-48049042)
chr3 (21-72)||(24624250-24624301)
chr3 (25-71)||(39723383-39723429)
chr3 (20-73)||(21574529-21574582)
chr3 (18-69)||(2413655-2413706)
chr3 (25-76)||(5391915-5391966)
chr3 (21-74)||(3015822-3015875)
chr3 (18-63)||(20192582-20192627)
chr3 (18-71)||(42817198-42817251)
chr3 (32-73)||(54180770-54180811)
chr3 (25-72)||(39723223-39723270)
chr3 (25-72)||(45541611-45541658)
chr3 (18-76)||(11040590-11040648)
chr3 (18-96)||(24281063-24281141)
chr3 (18-64)||(25182963-25183009)
chr3 (27-73)||(30923883-30923929)
chr3 (30-76)||(36101604-36101650)
chr3 (30-76)||(36139914-36139960)
chr3 (20-102)||(51130760-51130842)
chr3 (20-76)||(21367703-21367760)
chr3 (20-73)||(37273173-37273226)
chr3 (25-74)||(41724250-41724299)
chr3 (20-69)||(49772646-49772695)
chr3 (29-74)||(53762381-53762426)
chr3 (19-76)||(53952084-53952141)
chr3 (100-140)||(905055-905095)
chr3 (18-74)||(40880924-40880980)
chr3 (18-74)||(47132032-47132088)
chr3 (21-76)||(1217779-1217834)
chr3 (30-76)||(4401080-4401127)
chr3 (20-63)||(24604995-24605038)
chr3 (28-63)||(30750049-30750084)
chr3 (23-70)||(31010444-31010491)
chr3 (18-73)||(36200135-36200190)
chr3 (21-76)||(39602189-39602244)
chr3 (25-76)||(47249469-47249520)
chr3 (30-73)||(50952372-50952415)
chr3 (27-76)||(402526-402576)
chr3 (21-71)||(11039318-11039368)
chr3 (33-75)||(13804814-13804856)
chr3 (27-140)||(16790364-16790481)
chr3 (23-69)||(27787054-27787100)
chr3 (23-73)||(34254789-34254839)
chr3 (23-73)||(40122734-40122784)
chr3 (103-140)||(1395616-1395653)
chr3 (31-76)||(5166359-5166404)
chr3 (21-70)||(5431054-5431103)
chr3 (36-73)||(12923319-12923356)
chr3 (24-73)||(22214641-22214690)
chr3 (36-73)||(24785244-24785281)
chr3 (18-75)||(36338594-36338651)
chr3 (20-73)||(36646360-36646413)
chr3 (103-140)||(49587004-49587041)
chr3 (32-76)||(3044249-3044293)
chr3 (29-76)||(3194250-3194298)
chr3 (32-76)||(5396233-5396277)
chr3 (20-76)||(23314484-23314540)
chr3 (36-76)||(26599195-26599235)
chr3 (21-76)||(30443929-30443985)
chr3 (20-76)||(30573892-30573948)
chr3 (36-72)||(31403187-31403223)
chr3 (23-79)||(31710868-31710924)
chr3 (23-79)||(31711123-31711179)
chr3 (21-73)||(43115095-43115147)
chr3 (25-73)||(50004691-50004739)
chr3 (20-76)||(51206476-51206532)
chr3 (26-74)||(54837018-54837066)
[»] scaffold0608 (1 HSPs)
scaffold0608 (18-76)||(9613-9671)
[»] chr7 (58 HSPs)
chr7 (25-71)||(43219787-43219833)
chr7 (20-73)||(33894666-33894719)
chr7 (20-76)||(46082072-46082128)
chr7 (25-76)||(15740394-15740445)
chr7 (18-77)||(30496740-30496799)
chr7 (18-73)||(36598332-36598387)
chr7 (18-76)||(13960699-13960757)
chr7 (21-73)||(29287266-29287318)
chr7 (25-76)||(753005-753056)
chr7 (21-72)||(12834941-12834992)
chr7 (18-73)||(27626099-27626154)
chr7 (18-73)||(33645937-33645992)
chr7 (25-72)||(43219627-43219674)
chr7 (20-63)||(44615082-44615125)
chr7 (25-76)||(44808194-44808245)
chr7 (18-72)||(6857315-6857369)
chr7 (25-71)||(11047908-11047954)
chr7 (20-58)||(28340398-28340436)
chr7 (18-76)||(36537944-36538002)
chr7 (32-74)||(39539771-39539813)
chr7 (20-73)||(48157098-48157151)
chr7 (24-76)||(12110396-12110448)
chr7 (25-76)||(15740538-15740590)
chr7 (19-71)||(19719047-19719099)
chr7 (26-66)||(31908281-31908321)
chr7 (25-72)||(11048067-11048114)
chr7 (23-73)||(12234870-12234920)
chr7 (25-63)||(29290382-29290420)
chr7 (21-91)||(41040186-41040256)
chr7 (21-63)||(44686979-44687021)
chr7 (31-76)||(425813-425858)
chr7 (21-73)||(753186-753239)
chr7 (20-73)||(3500945-3500998)
chr7 (100-141)||(4572542-4572583)
chr7 (20-73)||(20553142-20553195)
chr7 (20-73)||(22387874-22387927)
chr7 (31-76)||(25130078-25130123)
chr7 (20-73)||(27496386-27496438)
chr7 (20-73)||(27503044-27503096)
chr7 (20-73)||(28844529-28844582)
chr7 (20-76)||(39967956-39968013)
chr7 (103-140)||(42656460-42656497)
chr7 (20-81)||(47042017-47042078)
chr7 (31-76)||(47134746-47134791)
chr7 (102-134)||(1418382-1418414)
chr7 (25-73)||(3610723-3610771)
chr7 (21-73)||(5939124-5939176)
chr7 (36-76)||(6552286-6552326)
chr7 (42-102)||(24363601-24363661)
chr7 (104-140)||(28178914-28178950)
chr7 (20-68)||(28520990-28521038)
chr7 (20-76)||(28691813-28691869)
chr7 (26-74)||(29768623-29768671)
chr7 (20-76)||(30535599-30535655)
chr7 (20-68)||(32329113-32329161)
chr7 (21-73)||(39551527-39551579)
chr7 (26-70)||(46223057-46223101)
chr7 (18-74)||(47427279-47427335)
[»] chr5 (69 HSPs)
chr5 (18-76)||(13604825-13604883)
chr5 (18-75)||(21768173-21768230)
chr5 (18-70)||(14295548-14295600)
chr5 (23-73)||(37794679-37794729)
chr5 (25-102)||(2568668-2568745)
chr5 (31-76)||(14331403-14331448)
chr5 (27-76)||(17258868-17258917)
chr5 (20-76)||(11700356-11700412)
chr5 (18-102)||(17368686-17368770)
chr5 (18-102)||(37611191-37611275)
chr5 (18-102)||(37787921-37788005)
chr5 (25-76)||(3280697-3280748)
chr5 (18-73)||(35960452-35960507)
chr5 (26-76)||(39105500-39105551)
chr5 (21-76)||(41957430-41957485)
chr5 (18-76)||(8089972-8090030)
chr5 (26-76)||(18857382-18857432)
chr5 (20-76)||(7808541-7808598)
chr5 (21-62)||(11457148-11457189)
chr5 (20-73)||(28586744-28586797)
chr5 (20-73)||(30269711-30269764)
chr5 (20-73)||(32172692-32172745)
chr5 (20-73)||(38728441-38728494)
chr5 (24-76)||(2569677-2569729)
chr5 (22-102)||(5531045-5531124)
chr5 (20-56)||(10152390-10152426)
chr5 (21-73)||(10907417-10907469)
chr5 (21-73)||(13194840-13194892)
chr5 (18-74)||(37968916-37968971)
chr5 (26-69)||(2092403-2092446)
chr5 (25-76)||(3977344-3977395)
chr5 (21-76)||(8177511-8177566)
chr5 (18-89)||(10125694-10125765)
chr5 (31-78)||(15406001-15406048)
chr5 (26-73)||(18853050-18853097)
chr5 (18-73)||(19177027-19177082)
chr5 (19-62)||(26516457-26516500)
chr5 (20-63)||(29363057-29363100)
chr5 (26-73)||(36542266-36542313)
chr5 (18-73)||(37526175-37526230)
chr5 (18-73)||(37690612-37690667)
chr5 (31-73)||(1899193-1899235)
chr5 (32-102)||(10272421-10272491)
chr5 (18-56)||(14364278-14364316)
chr5 (21-63)||(16380550-16380592)
chr5 (20-58)||(38047857-38047895)
chr5 (20-58)||(40499704-40499742)
chr5 (20-73)||(499709-499762)
chr5 (20-73)||(4619746-4619799)
chr5 (39-76)||(5284445-5284482)
chr5 (31-76)||(6587096-6587141)
chr5 (103-140)||(7096215-7096252)
chr5 (20-76)||(7985005-7985062)
chr5 (20-76)||(10639989-10640046)
chr5 (21-58)||(11296978-11297015)
chr5 (18-79)||(11707088-11707149)
chr5 (27-76)||(12459986-12460035)
chr5 (21-74)||(13264084-13264137)
chr5 (20-73)||(35963280-35963333)
chr5 (20-73)||(38338363-38338415)
chr5 (32-73)||(40205064-40205105)
chr5 (25-90)||(8089303-8089370)
chr5 (103-143)||(10280664-10280704)
chr5 (18-46)||(15905376-15905404)
chr5 (21-69)||(18700427-18700475)
chr5 (103-143)||(35960356-35960396)
chr5 (25-65)||(37489065-37489105)
chr5 (21-76)||(40159853-40159909)
chr5 (33-76)||(42099862-42099906)
[»] chr4 (51 HSPs)
chr4 (18-76)||(2996609-2996667)
chr4 (22-73)||(1965980-1966031)
chr4 (20-76)||(18011907-18011963)
chr4 (19-75)||(27721754-27721810)
chr4 (21-73)||(52754638-52754690)
chr4 (20-76)||(53315362-53315418)
chr4 (23-73)||(29467605-29467655)
chr4 (18-76)||(33534145-33534203)
chr4 (20-73)||(3176082-3176135)
chr4 (21-102)||(4798545-4798626)
chr4 (20-73)||(21952987-21953040)
chr4 (32-80)||(1075484-1075532)
chr4 (18-58)||(21683505-21683545)
chr4 (21-73)||(23819128-23819180)
chr4 (18-73)||(6428057-6428112)
chr4 (20-63)||(27970107-27970150)
chr4 (21-76)||(28614787-28614842)
chr4 (18-73)||(30207547-30207602)
chr4 (26-73)||(32071907-32071954)
chr4 (22-76)||(2980445-2980499)
chr4 (38-76)||(6978958-6978996)
chr4 (21-79)||(9680704-9680762)
chr4 (27-76)||(17822849-17822899)
chr4 (20-74)||(25571298-25571352)
chr4 (25-79)||(30631989-30632043)
chr4 (32-78)||(50800020-50800066)
chr4 (20-73)||(1137751-1137804)
chr4 (20-73)||(4684083-4684136)
chr4 (40-76)||(9841100-9841137)
chr4 (26-63)||(13140153-13140190)
chr4 (32-69)||(19304969-19305006)
chr4 (103-140)||(19422363-19422400)
chr4 (32-73)||(21157807-21157848)
chr4 (36-73)||(22684515-22684552)
chr4 (18-63)||(37863930-37863975)
chr4 (103-140)||(51044547-51044584)
chr4 (27-76)||(52746825-52746874)
chr4 (18-63)||(55870318-55870363)
chr4 (103-139)||(7029369-7029405)
chr4 (25-73)||(20936212-20936260)
chr4 (20-76)||(21043213-21043269)
chr4 (20-76)||(22236083-22236139)
chr4 (21-73)||(27122143-27122195)
chr4 (36-76)||(30024742-30024782)
chr4 (25-73)||(43886114-43886162)
chr4 (104-136)||(44019472-44019504)
chr4 (18-73)||(44938754-44938810)
chr4 (25-72)||(49939933-49939981)
chr4 (36-72)||(51555884-51555920)
chr4 (20-72)||(51560267-51560319)
chr4 (20-76)||(53155296-53155352)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-70)||(306368-306414)
[»] scaffold0508 (1 HSPs)
scaffold0508 (18-56)||(9775-9813)
[»] scaffold0311 (1 HSPs)
scaffold0311 (23-73)||(10598-10648)
[»] scaffold0147 (1 HSPs)
scaffold0147 (20-70)||(12682-12732)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-63)||(68962-69000)
[»] scaffold0590 (1 HSPs)
scaffold0590 (103-140)||(1162-1199)
[»] scaffold0275 (1 HSPs)
scaffold0275 (103-140)||(2776-2813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-73)||(27615-27668)


Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 1494422 - 1494596
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaattgactttattatat 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1494422 gagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttattttcaaaacctcgccatgatggctaatgaaattgactttattatat 1494521  T
Q  118 cttttcttatagaaatagcttatgcagttcaatcaaatcttttttatgttggcttgaatacacttttggtccttt 192  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  1494522 cttttcttatagaaatatcttatgcacttcaatcaaatcttttttattttggcttgaatacacttttggtccttt 1494596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 787424 - 787373
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  787424 gagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttat 787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33256832 - 33256776
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||    
T  33256832 gagagcttatgaaaacagcttatgacatgttcataaactgttctcagcttattttca 33256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 11063579 - 11063524
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| |||||  |||||||||||||||||| |||||||||||||||||||    
T  11063579 agagcttatggaaacatattatgacatgtccataagttgtttttagcttattttca 11063524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4350784 - 4350726
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||||||||||||||||||||||||| ||||| ||| |||||| |||||||||    
T  4350784 gagagaacttatgaaaacagcttatgacatgttcataaactgattttaggttattttca 4350726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 27237883 - 27237941
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatga 90  Q
    |||||||||||||||||| ||||||||||||||||||||||| || || ||| ||||||    
T  27237883 aaacagcttatgacatgtacataagctgtttttagcttatttccataaactctccatga 27237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 35378994 - 35379076
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||| |||||||||||| || ||| ||| ||| ||| ||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaa 35379076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 43065428 - 43065481
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| |||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttattt 43065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 1647323 - 1647275
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  1647323 cttatgaaaacagcttatgacatgctcataagctgttttcagcttattt 1647275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 3067357 - 3067413
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||| | ||||  |||||| ||||||||||||||||||    
T  3067357 gagagcttatgaaaacagcttataatatgtatataagccgtttttagcttattttca 3067413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 25609781 - 25609741
Alignment:
Q  100 aaattgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  25609781 aaattgactttattttatcttttcttatagaaatagcttat 25609741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 31096393 - 31096337
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||| | || |||||||||||||||||||| | ||||||||||    
T  31096393 gagagcttatgaaaacagttaataacatgtccataagctgttttaaacttattttca 31096337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 15120275 - 15120204
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    ||||||||||| ||||| |||||||||||| ||| ||||||||| |||||||||| | || ||| |||||||    
T  15120275 gagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgat 15120204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 33576574 - 33576629
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||| ||| | |||||||  ||||||||||||||||||||||||    
T  33576574 agagcttatgaaaacaacttgtcacatgtctttaagctgtttttagcttattttca 33576629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 35538667 - 35538722
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||  ||||||||    
T  35538667 gagagagcttgtgaaaatagcttatgacatgttcataagctgttttccgcttattt 35538722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 35557101 - 35557156
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||  ||||||||    
T  35557101 gagagagcttgtgaaaatagcttatgacatgttcataagctgttttctgcttattt 35557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 44606093 - 44606144
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| ||||||||||||||||||| |||||| |||| |||||||    
T  44606093 cttatgaaaacaacttatgacatgtccataagttgttttcagctgattttca 44606144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 680589 - 680539
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||||||    
T  680589 ttatgaaaacagcttatgacatgtttataaactgttttcagcttattttca 680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 4326385 - 4326427
Alignment:
Q  34 acagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  4326385 acagcttatgagatgtccataagctgtttttatcttattttca 4326427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 10285949 - 10285899
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| | |||||||||||||||||||||||||| | |||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaacttattt 10285899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 33192289 - 33192243
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  33192289 cttatgaaaacagtttatgacatatccataagctgttttcagcttat 33192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 33580590 - 33580540
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||    
T  33580590 ttatgaaaacagcttatgacatatccataagctgctttcagattattttca 33580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 43570506 - 43570425
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaa 101  Q
    |||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||| || ||  ||| ||||||| |||||    
T  43570506 gagaacttatgaaaacagcttatgacattgttcataagct-tttttagcttattttcataagctttccaggatggcttatgaa 43570425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 5902532 - 5902581
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  5902532 cttatgaaaacagcttatgacatgttcataaactgttttcagcttgtttt 5902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 10285428 - 10285392
Alignment:
Q  39 ttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10285428 ttatgacatgtccataagctgttttcagcttattttc 10285392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 12215896 - 12215856
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  12215896 agcttatggaaatagcttatgacatgtccataagctgtttt 12215856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 14451037 - 14451081
Alignment:
Q  29 tgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||    
T  14451037 tgaaaacaacttatgacatgaccataagctgttttcagcttattt 14451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 26281865 - 26281909
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    ||||| |||||||||||||||||||||| || |||||||||||||    
T  26281865 ttatggaaacagcttatgacatgtccattagttgtttttagctta 26281909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 32364709 - 32364765
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| ||| ||||||||||| ||||||| || |||||| ||||||||||||    
T  32364709 gagagcttataaaaccagcttatgacgtgtccatgagttgttttcagcttattttca 32364765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 34652012 - 34652096
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||| |||||||  ||||| |||||||||||||||||||||||||| | ||||||| || || ||| ||| ||| ||| ||||||    
T  34652012 gagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaa 34652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 41809224 - 41809276
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| || ||||| |||||||||||| |||||| ||||||||||||||||    
T  41809224 agagcttgtggaaacaacttatgacatgttcataagttgtttttagcttattt 41809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 43456686 - 43456738
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| |||||||| || ||||||||||||||| ||||||| |||||||||    
T  43456686 agagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttattt 43456738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 44438826 - 44438870
Alignment:
Q  29 tgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttattt 44438870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 9595349 - 9595294
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||| |||||||||||||||| | || |||| ||||||||||||    
T  9595349 agagtttatgaaaacatcttatgacatgtccatgaactattttcagcttattttca 9595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 10563548 - 10563591
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||    
T  10563548 aaacagcctatgacatgtccataagctattttcagcttattttc 10563591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 30538153 - 30538204
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||  ||||| ||||||||||||||||||| |||||| |||||||||    
T  30538153 gagcttatagaaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 1318328 - 1318290
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  1318328 gagagcttatgaaaacatcttatgacatgtccagaagct 1318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 1801760 - 1801722
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  1801760 gagaacttatgaaaacagcttatgacatgttcataagct 1801722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 6547978 - 6547936
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttcaaa 78  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||    
T  6547978 agcttatgccatgtccataagctgttttcagcttatttccaaa 6547936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 9878661 - 9878703
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataagttgtttt 9878703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16398447 - 16398489
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgt 60  Q
    |||||| | |||||||||| |||||||||||||||||||||||    
T  16398447 gagagaacatatgaaaacaacttatgacatgtccataagctgt 16398489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 29430845 - 29430799
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    |||||||||| |||||||||||||||||| ||||| ||| |||||||    
T  29430845 cttatgaaaatagcttatgacatgtccattagctgctttaagcttat 29430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 43529842 - 43529892
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||| ||||| |||||||| |||| || |||||||||    
T  43529842 ttatgaaaacagcttatgccatgttcataagctattttcagtttattttca 43529892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 750542 - 750505
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  750542 agagcttatgaaaacagcttataacatatccataagct 750505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1830137 - 1830084
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||| ||||||||||||||||| |  ||||| |||||||||    
T  1830137 gagagcttatggaaacatcttatgacatgtccatagggagttttcagcttattt 1830084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2091017 - 2091066
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||||| ||||||||||| |||  ||||||||||||| ||||||||||    
T  2091017 cttatgaatacagcttatgatatggtcataagctgttttcagcttatttt 2091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 4550839 - 4550794
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgttttta 65  Q
    ||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  4550839 gagagcttatggaaacaacttatgacatgttcataagctattttta 4550794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 5759553 - 5759609
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgt-ttttagcttattttca 76  Q
    ||||||||||| |||||||||| |||||||||||||| ||| ||| ||||||||||||    
T  5759553 gagagcttatggaaacagctta-gacatgtccataagttgtgtttcagcttattttca 5759609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 9478393 - 9478348
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  9478393 gagagagtttatgcaaacaacttattacatgtccataagctgtttt 9478348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 9530708 - 9530788
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||| ||| |||| |||||||||||||||| | ||||||||||| ||||| || ||| ||| ||| ||| ||||||    
T  9530708 agagcttatggaaatagct-atgacatgtccataagttatttttagcttactttcataagctctccaggatagcttatgaaa 9530788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13056229 - 13056176
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| ||||| || ||||||||| |||||||||||| ||||| ||||||||||    
T  13056229 gagagtttatggaagcagcttatggcatgtccataagttgtttgtagcttattt 13056176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 14316123 - 14316176
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||| |||||||||| |  |||||||||||| |||||||||    
T  14316123 gagagcttatggaaacaacttatgacatatgtataagctgttttcagcttattt 14316176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 14844993 - 14845030
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  14844993 agagtttatgaaaacagcttatgacatgtccgtaagct 14845030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 16451211 - 16451154
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||| ||||||||| ||| ||| ||||||||| ||||||||||||    
T  16451211 gagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttca 16451154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 17380660 - 17380603
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaa 77  Q
    |||| |||||| ||||| ||| ||||||||| |||||||||||| ||||| |||||||    
T  17380660 gagatcttatgtaaacaacttgtgacatgtcaataagctgttttcagctttttttcaa 17380603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 17952789 - 17952826
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  17952789 ttgactttattttatcttttgttatagaaatagcttat 17952826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 18179224 - 18179273
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||||||||| |||| ||||||||||| |||| |||| |||||||||||    
T  18179224 ttatgaaaacatcttaagacatgtccattagctattttcagcttattttc 18179273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 18884959 - 18884906
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||  |||||||||||||||| ||||| ||||||||| || ||||||    
T  18884959 gagagcttatagaaacagcttatgacatttccattagctgttttcagattattt 18884906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 18962015 - 18962064
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||||||||||||||||| |||||||||| |||  |||||||| |||||    
T  18962015 gagagcttatgaaaacagcatatgacatgttcatgtgctgttttcagctt 18962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 28677637 - 28677690
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||||||||||||||||||||| | |||||| ||||||  ||||||||    
T  28677637 gagaacttatgaaaacagcttatgacattttcataagttgttttcggcttattt 28677690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 31461420 - 31461383
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  31461420 ttgactttattttatcttttgttatagaaatagcttat 31461383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 32098396 - 32098433
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  32098396 ttgactttattttatcttttgttatagaaatagcttat 32098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 32821889 - 32821848
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| |||||||||||||||||||||||||| || ||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttattt 32821848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 33197327 - 33197364
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttat 33197364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 37518837 - 37518874
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  37518837 agagtttatgaaaacagcttatgaaatgtccataagct 37518874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 40158805 - 40158760
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||    
T  40158805 cttatgaaaacagcttatgacatgtttataagttgttttcagctta 40158760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 41065816 - 41065779
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  41065816 agagcttgtgaaaacagcttatgacatatccataagct 41065779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 41170603 - 41170550
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| || |||||||||||  ||||||| |||| ||||||||||||    
T  41170603 agcttatgaaaatagtttatgacatgtttataagctattttaagcttattttca 41170550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 41293140 - 41293197
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtc-cataagctgtttttagcttattttca 76  Q
    |||| ||||| ||||||||||||||||| || ||||||||||||| ||||||| ||||    
T  41293140 gagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattca 41293197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 1939323 - 1939363
Alignment:
Q  33 aacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||||||||||||||||||||| | |||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttattt 1939363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 7103480 - 7103516
Alignment:
Q  40 tatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||| |||||||||||||||||||    
T  7103480 tatgacatatccataagttgtttttagcttattttca 7103516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 9556331 - 9556295
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataag 56  Q
    ||||||||||||||||| || ||||||||||||||||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataag 9556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 11307404 - 11307348
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||| |||| | ||||||| ||||||| |||||||||  |||||||||||    
T  11307404 gagagcttatggaaaccgattatgacttgtccatgagctgttttctgcttattttca 11307348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 11513989 - 11513908
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||||||||  ||| |||| | ||||||| |||| ||||||||| |||||  || ||||||| ||| ||||||    
T  11513989 agagagcttatgaaaacagc--atggcatgcctataagctattttcagcttatttccaaaagttctccatgatagcttatgaaa 11513908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 17221519 - 17221571
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| ||| | |||||||||| ||||||| || ||||||||||||||    
T  17221519 agagcttatggaaatatcttatgacatatccataaactttttttagcttattt 17221571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 33942224 - 33942160
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||||| ||||||||||||| |||| |||||||  | ||| | ||||||||| ||||||    
T  33942224 cttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaa 33942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 35378510 - 35378566
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||||||| ||||| ||| |||||| | |||| ||||||||||||    
T  35378510 gagaacttatgaaaacagctgatgacttgttcataagttattttcagcttattttca 35378566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41851143 - 41851179
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagc 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  41851143 agagcttacggaaacagcttatgacatgtccataagc 41851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 43827936 - 43827984
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| ||||||||||||||||||| |||||| || ||||| |||||||    
T  43827936 cttataaaaacagcttatgacatgttcataagttgcttttaacttattt 43827984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 11639395 - 11639450
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11639395 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 11639450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4482024 - 4481966
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  4482024 gagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 4202128 - 4202184
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  4202128 gagagagcttat-aaaacagcttatgacatgtccataagctattttcagcttattttc 4202184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 4699598 - 4699646
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4699598 cttatgaaaacaacttatgacatgttcataagctgtttttagcttattt 4699646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 37811946 - 37811862
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||| | ||||||| ||  | ||| ||||||||||| ||||||    
T  37811946 gagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaa 37811862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 39270403 - 39270459
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | ||||||||||    
T  39270403 gagagcttatgaaaacagcttttggcatgtccataagctgttttcaacttattttca 39270459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 4622172 - 4622129
Alignment:
Q  33 aacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  4622172 aacatcttatgacatgtccataagctgtttttagcttattttca 4622129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 38170668 - 38170723
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    |||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||    
T  38170668 gagagcttatgaaaacagcttatgacatgttcataagttgttttcagcttgttttc 38170723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 46499853 - 46499979
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggct--aatgaaa-----ttgactttatt 113  Q
    |||| ||||| |||| ||||||||||||||| ||| ||||||| | |||||||||| || ||| ||||||  |||  ||| |||     |||||||||||    
T  46499853 agagtttatggaaacggcttatgacatgtccctaaactgttttaaccttattttcataagctctccatgaaagcttaaataaaaacaatttgactttatt 46499952  T
Q  114 atatcttttcttatagaaatagcttat 140  Q
     ||||||||||||||||||||||||||    
T  46499953 ttatcttttcttatagaaatagcttat 46499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 24968397 - 24968447
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  24968397 agcttataaaaacaacttatgacatgtccataagctgtttctagcttattt 24968447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 25432300 - 25432250
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  25432300 agcttataaaaacaacttatgacatgtccataagctgtttctagcttattt 25432250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 35925777 - 35925711
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||| || || ||| |||||||    
T  35925777 cttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgat 35925711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 6292574 - 6292529
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6292574 aaaacagcttatgacatgttcataagctgttttcagcttattttca 6292529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 17628689 - 17628632
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||    
T  17628689 gagcttatggaaacaacttatgacatgtccataagctgttttcagcatatttccaaaa 17628632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27140572 - 27140499
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    ||||||| ||| | ||||||||||||||||||||||||| |||||| ||||||||| || || ||| |||||||    
T  27140572 gagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgat 27140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 28689429 - 28689486
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| |||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  28689429 agagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttca 28689486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 27963361 - 27963401
Alignment:
Q  33 aacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27963361 aacagcttatgacatgtccataagttgtttttagcttattt 27963401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 44422791 - 44422735
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||| ||||||||||||||||||||||||  |  ||||||||||||    
T  44422791 gagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttca 44422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 1565518 - 1565569
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  1565518 cttaggaagacagcttatgacatgtgcataagctgttttcagcttattttca 1565569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 19412574 - 19412628
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| ||||| ||||| |||||||||||||||||||||| |||| ||||||||    
T  19412574 agagagtttatggaaacaacttatgacatgtccataagctgattttggcttattt 19412628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34380538 - 34380484
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| | |||||| ||||||||| ||||||||||||||| |||||||||    
T  34380538 agagagcttacggaaacaggttatgacatttccataagctgttttcagcttattt 34380484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 38867807 - 38867865
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||| ||| | ||||||| |||||||| || |||||||||||||||||||    
T  38867807 gagagagcttatggaaataacttatgatatgtccatcagttgtttttagcttattttca 38867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5591942 - 5591987
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||    
T  5591942 gagagagcttatgaaaacagcttatgacacgtgcataagccgtttt 5591987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 6262830 - 6262777
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| |||||||||    
T  6262830 gagagcttatgaaaataacttatgatatgtccataagttgttttaagcttattt 6262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 7262496 - 7262549
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| |||||||||| |||||||| ||||||||||||| | |||||||    
T  7262496 gagagcttataaaaacagcttttgacatgttcataagctgttttcaccttattt 7262549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 10854815 - 10854770
Alignment:
Q  30 gaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    |||||||||||||||||||| || |||||||||| |||||||||||    
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttc 10854770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 11695946 - 11695897
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||| ||||||||||||||||||||||||| | ||||||||||    
T  11695946 tatggaaacagtttatgacatgtccataagctgttttcaacttattttca 11695897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 11941355 - 11941298
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||| ||||||||||||    
T  11941355 gagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattttca 11941298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 12477273 - 12477318
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||    
T  12477273 atgaaagcagcttatgacatgtccataagttgttttcagcttattt 12477318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 26184828 - 26184787
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  26184828 aaacagcttatgacatgtccataagctgttttcagattattt 26184787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 43029380 - 43029433
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||| |||||||||    
T  43029380 gagagcttatgaaaacagtttattacatgtctataagctattttcagcttattt 43029433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 3887614 - 3887666
Alignment:
Q  25 cttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||||||||||| |||||||||| || ||||||||||||||| ||||||||||    
T  3887614 cttatgaaaacatcttatgacattgttcataagctgtttttaacttattttca 3887666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 10199394 - 10199442
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||||||    
T  10199394 atgaaaatagcttatgacatgttcataagttgttttcagcttattttca 10199442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 20713732 - 20713692
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  20713732 agcttacgacatgtccataagctgtttttatcttattttca 20713692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 24460391 - 24460439
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||| |||||||||||||| ||||||||||||  ||||||||||    
T  24460391 ttatgaaaatagcttatgacatgttcataagctgtttccagcttatttt 24460439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 30815631 - 30815687
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||  |||||||||||||||||| |||||  |||||| ||||||||||||    
T  30815631 gagagcttatataaacagcttatgacatgttcataaaatgttttcagcttattttca 30815687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 31517718 - 31517774
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||| |||||| || ||||||||| ||||||||||||| ||||||||||||    
T  31517718 gagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttca 31517774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 37593670 - 37593718
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||||||||    
T  37593670 atgaacacaacttatgacatgttcataagctgttttcagcttattttca 37593718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 17631079 - 17631118
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  17631079 agagagcttatggaaacaacttatgacatgtccataagct 17631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 27146012 - 27145977
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataag 56  Q
    |||||||||| |||||||||||||||||||||||||    
T  27146012 agagcttatggaaacagcttatgacatgtccataag 27145977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10744393 - 10744339
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||| ||| ||||||||||||||| ||||| ||||||||||||| | ||||||||    
T  10744393 gagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttt 10744339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 16981933 - 16981967
Alignment:
Q  39 ttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||| ||||||||||||||||    
T  16981933 ttatgacatgtccataagttgtttttagcttattt 16981967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 25479671 - 25479617
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||| || ||||||||||| ||| || |||||| ||||||||||||    
T  25479671 gagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttca 25479617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 27887112 - 27887150
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  27887112 agcttatgacatgtccataaattgtttttagcttatttt 27887150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 34536246 - 34536216
Alignment:
Q  24 gcttatgaaaacagcttatgacatgtccata 54  Q
    |||||||||||||||||||||||||||||||    
T  34536246 gcttatgaaaacagcttatgacatgtccata 34536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 48282218 - 48282172
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgttttt 64  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||    
T  48282218 gagagagcttatgaaaataggttatgacatgtccatacgttgttttt 48282172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10439778 - 10439725
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||   |||||||||||||||| ||| ||| |||||||||    
T  10439778 gagagcttatgaaaacaaactatgacatgtccataatctgctttcagcttattt 10439725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12564852 - 12564905
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| ||| ||||||||| | | ||||||||||||||||||| |||||||||    
T  12564852 gagagcctataaaaacagctaacgccatgtccataagctgttttcagcttattt 12564905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 15579574 - 15579521
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||| || ||||| ||||||||||||||||||| |||| | |||||||||    
T  15579574 gagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttattt 15579521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 21002233 - 21002180
Alignment:
Q  39 ttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatg 92  Q
    ||||||||||||||||||||||||| |  ||||||||| |||||| ||| ||||    
T  21002233 ttatgacatgtccataagctgttttcaatttattttcataacctctccaagatg 21002180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 29723569 - 29723528
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  29723569 aaacagcttatgacatgtccataaactgttttcaacttattt 29723528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 29929599 - 29929652
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| || ||||||||| |||||| |||||| ||| |||||    
T  29929599 gagagcttatgaaaacaactcatgacatgtgcataagttgttttcagcatattt 29929652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 35080060 - 35080129
Alignment:
Q  33 aacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||| |||||||||||| ||||||||||||| |||||||||  | || ||| ||||||| ||| ||||||    
T  35080060 aacaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaa 35080129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 37842338 - 37842387
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||||||||| || ||||||||| ||||||| ||||| ||||||||||    
T  37842338 cttatgaaaacatctaatgacatgttcataagcagttttcagcttatttt 37842387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 38001688 - 38001639
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    |||| ||||||||||||||||||||| ||| |||||| |||||| |||||    
T  38001688 gagaacttatgaaaacagcttatgacctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 43338203 - 43338126
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||| |||||||||||||||||| ||||| || |||| ||| |||||||| || ||| ||||| | ||| ||||||    
T  43338203 cttatggaaacagcttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaa 43338126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 44031977 - 44032030
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| || ||||| |||||||||||||||||| |||| |||| ||||    
T  44031977 gagagcttatgtaagcagctaatgacatgtccataagctattttcagctaattt 44032030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 47498816 - 47498873
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||| ||||||||| || || |||||| |||||||||||||||||||    
T  47498816 gagaacttatgaaaatagcttatgatattgttcataagttgtttttagcttattttca 47498873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 50319274 - 50319237
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  50319274 ttgactttattttatcttttgttatagaaatagcttat 50319237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 1662665 - 1662609
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||| | ||||| ||||||||||||||||||  | ||||||| |||||||||    
T  1662665 gagagcttacggaaacaacttatgacatgtccataaaatatttttagtttattttca 1662609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 4549940 - 4549888
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    |||| ||| ||||||||| ||||||||||| |||||| |||||| ||||||||    
T  4549940 gagaacttctgaaaacagattatgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 4768812 - 4768860
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||||||| |||||||||||||  |||||| |||||||||    
T  4768812 cttacgaaaacagcttacgacatgtccataacttgttttcagcttattt 4768860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 4920756 - 4920804
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| ||||||||||| | || | |||||||||||||||||||    
T  4920756 atgaaaacaggttatgacatgttcttaggttgtttttagcttattttca 4920804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 6262111 - 6262059
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||| |||||||||||| |||||||| |||| | |||||||    
T  6262111 agagcttatgagaacaacttatgacatgttcataagctattttcaacttattt 6262059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15581345 - 15581293
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| ||| ||||| ||||||||||||| |||||||||||| ||| |||||    
T  15581345 agagctaatggaaacaacttatgacatgtctataagctgttttcagcctattt 15581293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 15942731 - 15942779
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagc-tgtttttagcttattt 73  Q
    ||||||||||| |||||||||||| ||||||| |||||| |||||||||    
T  15942731 ttatgaaaacaacttatgacatgttcataagcatgttttcagcttattt 15942779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 17420294 - 17420242
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| ||||| ||||||||||||  |||||| | |||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttattt 17420242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 27145634 - 27145598
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataag 56  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  27145634 gagagcttatggaaaaagcttatgacatgtccataag 27145598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 31118130 - 31118082
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| |||||||||||| ||| || |||||| |||||||||    
T  31118130 cttatgaaaacatcttatgacatgttcatcagttgttttcagcttattt 31118082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 35350720 - 35350684
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagct 68  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  35350720 aaacaacttatgacatgtccataagctgttttcagct 35350684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 45394202 - 45394154
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||||||||||||| ||||| |||||||||||| | |||||||    
T  45394202 cttaagaaaacagcttatgagatgtcgataagctgttttcaacttattt 45394154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 47960607 - 47960655
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgttttta-gcttattt 73  Q
    ||||||||||||||| || || |||||||||||||||||| ||||||||    
T  47960607 ttatgaaaacagcttgtgtcacgtccataagctgtttttatgcttattt 47960655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 49692028 - 49692064
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccata 54  Q
    |||||| |||||||||| |||||||||||||||||||    
T  49692028 gagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 11569434 - 11569517
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||| ||| ||||||| ||| ||||||    
T  11569434 agagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaa 11569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 14949958 - 14949905
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| | |||||||||||||||||||||||||| |||||||||    
T  14949958 gagagcttatgaaaataacttatgacatgtccataagctgttttcagcttattt 14949905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 26473730 - 26473786
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttca 26473786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 29168642 - 29168686
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  29168642 agagagcttatgaaaacagcttatgacatgtccataagctatttt 29168686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 26410372 - 26410323
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  26410372 gagagcttatggaaacagctcatgacatgtccagaagctgtttttagctt 26410323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 29169914 - 29169967
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||    
T  29169914 gagagcttatgaaaacagcatatgacatatccataagctatttttagctcattt 29169967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 35220702 - 35220755
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  35220702 agagtttatgaaaacagtttatgacatgcccataagctatttttagcttatttt 35220755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 3254312 - 3254264
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  3254312 cttaagaaaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 9835879 - 9835931
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  9835879 agagcttatgtaaacagcttatgacatgttcataagctgttttcatcttattt 9835931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 9540974 - 9541033
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |||||||||||||||    
T  9540974 gagagcttatggaaacatcttatgacatgtccataatttgtgttcagcttattttcaaaa 9541033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 7111362 - 7111304
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||  | ||||||| | | ||||||||||||||||||||||||    
T  7111362 gagagagcttatgaaaacaattgatgacatattcgtaagctgtttttagcttattttca 7111304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 9700095 - 9700037
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||| | ||||||||||    
T  9700095 gagagagcttgtgaaatcaatttatgacatgtccataagctgttttcaccttattttca 9700037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11183638 - 11183584
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||||| ||||||| ||||| |||||||||||| |||||||||    
T  11183638 agagagcttataaaaacaacttatgatatgtctataagctgttttcagcttattt 11183584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 12972944 - 12972894
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||| || |||||||| |||| |||||||||||    
T  12972944 ttatgaaaacagcttatgacatatctataagctggttttggcttattttca 12972894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 30389193 - 30389135
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||| |||| ||||||||| |||||| |||||| ||||||||||||    
T  30389193 gagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttca 30389135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 30987967 - 30988013
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgttttt 64  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  30987967 gagagagcttatggaaacaacttatgacatgtccataagctattttt 30988013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5088944 - 5088891
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||||| |||| |||||||||||||||||||| | |||||||    
T  5088944 gagagcttatggaaacagtttataacatgtccataagctgttttcaacttattt 5088891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 11415247 - 11415190
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||||| ||||||||||| ||||||||||||||| || | ||||||||||||    
T  11415247 agagagtttatggaaacagcttataacatgtccataagctattctcagcttattttca 11415190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 42215292 - 42215337
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||    
T  42215292 atgaaaacagcttatgacttgttcataagctgttttcagcttattt 42215337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3090239 - 3090167
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    ||||| |||||||||||| |||||| ||||||  ||||||||||| ||||| |||||| || ||| |||||||    
T  3090239 agagatcttatgaaaacaacttatggcatgtcagtaagctgttttcagcttgttttcacaagctctccatgat 3090167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 8066748 - 8066804
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||  ||| |||||||||||||||| | |||| ||||||||||||    
T  8066748 gagagcttatgaaaatcgctgatgacatgtccataagtttttttcagcttattttca 8066804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 10383972 - 10383924
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||| | ||||||||||||  |||||||||    
T  10383972 cttatgaaaacagcttatgacattttcataagctgtttacagcttattt 10383924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 12361287 - 12361231
Alignment:
Q  17 agagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| |||||  ||| |||||||||||||||||||||||||||| | |||||||    
T  12361287 agagagatcttatagaaatagcttatgacatgtccataagctgttttcaacttattt 12361231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 13459737 - 13459681
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||||||||||||||| | ||||| ||||||| ||| ||||||||    
T  13459737 gagaacttatgaaaacagcttatgacattttcataaactgttttcagcctattttca 13459681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 20672825 - 20672729
Alignment:
Q  37 gcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa-----ttgactttattatatcttttcttata 128  Q
    ||||||||||||| ||||||||||||| |||||||||||| || ||| ||| ||| ||| || |||     ||||||||||| |||||||| |||||    
T  20672825 gcttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 39551193 - 39551241
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||| ||||| ||||||||||||||| |||||||||||| ||||||||    
T  39551193 ttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttt 39551241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 6966978 - 6966895
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||||  ||||| ||||| |||||||  |||||| ||||  ||||||||||| || ||| ||| ||||||||||||||    
T  6966978 agagagcttattgaaacaacttataacatgtcattaagctattttccgcttattttcataagctccccaagatggctaatgaaa 6966895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7008694 - 7008635
Alignment:
Q  17 agagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||  ||||| | |||||||||||| |||| | |||||||||||||||||    
T  7008694 agagagagcttatagaaacaacctatgacatgtccttaagatatttttagcttattttca 7008635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 10120851 - 10120792
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgt-ccataagctgtttttagcttattttca 76  Q
    |||||| ||||||||||||||||||||||| |  |||| |||||||| ||||||||||||    
T  10120851 gagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttca 10120792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 10722710 - 10722663
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||||    
T  10722710 ttatggaaacagcttatgacatctccataggttgtttttagcttattt 10722663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 12851263 - 12851212
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||| |||||| |||||| ||||||  |||||||||||    
T  12851263 cttatgaaaacagcttataacatgttcataagatgttttcggcttattttca 12851212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 30259208 - 30259153
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| ||||||||||||| ||||| ||||| |||||| || ||||||    
T  30259208 gagagagcttatggaaacagcttatgatatgtctataagttgttttcagtttattt 30259153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 7918424 - 7918466
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgttt 62  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||    
T  7918424 gagagcttatgaaaacaacttaagacatgttcataagctgttt 7918466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 11795167 - 11795101
Alignment:
Q  37 gcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaat 103  Q
    ||||||||||||||||||| ||||||| ||||||||| || || ||| |||| || ||| |||||||    
T  11795167 gcttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaat 11795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 31875571 - 31875629
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||| ||||| ||||||||||||||||||||  |||| | ||||||||||    
T  31875571 gagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttca 31875629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 41620275 - 41620333
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcg 84  Q
    ||||| |||||  |||||||||||||||||| ||||||  |||||||||||||| ||||    
T  41620275 ttatggaaacaaattatgacatgtccataagttgttttccgcttattttcaaaagctcg 41620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 44348469 - 44348431
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttatg 141  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  44348469 ttgactttattacatcttttgttatagaaatagcttatg 44348431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 45071466 - 45071428
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  45071466 gagagcttatgaaaacaacttatgacatgtctataagct 45071428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 1470944 - 1470981
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  1470944 ttgactttattttatcttttattatagaaatagcttat 1470981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 1930128 - 1930071
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||| ||| ||||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  1930128 gagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttca 1930071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 2458544 - 2458597
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||| |||||||||| ||||| ||||||||||||| || ||||||    
T  2458544 gagaacttatgaagacagcttatggcatgttcataagctgttttcagtttattt 2458597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 2487986 - 2488043
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaa 77  Q
    |||| |||||||||||| ||||| |||||| || || ||||||||||||||| |||||    
T  2487986 gagaacttatgaaaacaacttataacatgttcaaaaactgtttttagcttatcttcaa 2488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 6950414 - 6950361
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||| | ||||||||||| ||||| |||||| |||||||||    
T  6950414 gagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttattt 6950361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 25869262 - 25869315
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    ||||||||||||||||||| |||||| ||||||||| || || ||| |||||||    
T  25869262 cttatgacatgtccataagttgttttcagcttatttccataaactctccatgat 25869315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 32840963 - 32841020
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||| ||||||||| ||| |||||| |||||| ||||||||||||    
T  32840963 gagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttca 32841020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33808396 - 33808339
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||| ||||||||| || || |||||| |||||||||||||||||||    
T  33808396 gagaacttatgaaaatagcttatgatattgttcataagttgtttttagcttattttca 33808339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 43368681 - 43368734
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||| |||||||||||| ||| |||| |||| | ||||||||||    
T  43368681 agcttatgaaaacaacttatgacatgttcattagctattttcaacttattttca 43368734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 21130706 - 21130653
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||    
T  21130706 gagagagcttatggaaatagcttttgacatgtccat--gctgttttgagcttattt 21130653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 21653155 - 21653091
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||| || |||||||| |||| |||||||||||| || ||| ||| ||| ||||||||||    
T  21653155 cttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaa 21653091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 33940112 - 33940057
Alignment:
Q  18 gagagagcttatgaaaacagcttat-gacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||||  |||||| |||||||| ||||||| ||||||    
T  33940112 gagagagcttatgaaaacagcttatacacatgt-cataagctttttttagtttattt 33940057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 34290961 - 34290905
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||||| | ||||||||| ||||||||||||||  |||| ||||||||||||    
T  34290961 gagagtttatggagacagcttattacatgtccataagcctttttcagcttattttca 34290905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 39049361 - 39049321
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  39049361 agcttatgaaaacaacttataacatgtcaataagctgtttt 39049321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 40728506 - 40728546
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttatgca 143  Q
    ||||||||||| |||||||| ||||||||||| ||||||||    
T  40728506 ttgactttattttatcttttgttatagaaataacttatgca 40728546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 28641728 - 28641783
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  28641728 agagcttatgaaaacagcttataacatgttcataagctgtttttagcttattttca 28641783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 696529 - 696483
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  696529 cttatgaaaacagcttatgacatgttcataagctgtttttagcttat 696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 2027384 - 2027437
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  2027384 gagagtttatgaaaacagcttatgacatttccataagctgttttcagcttattt 2027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 1575982 - 1575931
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  1575982 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttca 1575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 31624177 - 31624126
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  31624177 cttatgaaaacagcttatgacatgttcataagctgttttcaacttattttca 31624126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 32171359 - 32171414
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||||    
T  32171359 gagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttattt 32171414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 32577962 - 32578017
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||| |||||||||    
T  32577962 gagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttattt 32578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 1669776 - 1669829
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||    
T  1669776 gagagcttatgaaaacaacttatgacatgtctataagctgttttcagctcattt 1669829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 2034424 - 2034477
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  2034424 gagagtttatggaaacagcttatgacatttccataagctgttttcagcttattt 2034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 33832250 - 33832307
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| |||||||||||| ||||||||||||  ||||| |||||||||||||||||||    
T  33832250 agagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttca 33832307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 738659 - 738711
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  738659 agagtttatgaaaacaacttatgacgtgtccataaactgtttttagcttattt 738711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8183237 - 8183181
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||| | ||||||    
T  8183237 gagagcttatgaaaacagcttacgaaatgttcataagctgtttttagcctgttttca 8183181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 696689 - 696642
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  696689 cttatcaaaacagcttatgacatgttcataagctgttttcagcttatt 696642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 9027669 - 9027614
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| ||| | ||||||||||||||||||| |||||| ||||||||||||    
T  9027669 agagcttatggaaataacttatgacatgtccataagttgttttcagcttattttca 9027614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 30865843 - 30865800
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgttttta 65  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  30865843 gagcttatgaaaacagcttatcacatgtccataagttgttttta 30865800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 2767727 - 2767769
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgttt 62  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  2767727 gagagcttgtggaaacagcttatgacatgtccataagctgttt 2767769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 31338068 - 31338030
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  31338068 gagagcttatgaaaacaacttatgacatgtccataagct 31338030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 5566155 - 5566208
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||| | |||||||    
T  5566155 gagagctaatgaaaacagcttattacatgtccataagttgttttcaacttattt 5566208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 9912168 - 9912225
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||| ||||||||||||| || ||||||||||||| ||||||||||||    
T  9912168 gagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttca 9912225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 20377898 - 20377951
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||  ||||||||    
T  20377898 gagagcttatgaaaacaacttatgacatgtctataagttgttttcggcttattt 20377951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 22743573 - 22743520
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| ||||||||| ||||| |||||| ||||||||||||| |||||||||    
T  22743573 gagagctcatgaaaacaacttattacatgttcataagctgttttcagcttattt 22743520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 30863337 - 30863288
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    |||||||||||||||| |||||||||||| |||||| |||||| ||||||    
T  30863337 agagcttatgaaaacaacttatgacatgtacataagttgttttcagctta 30863288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 34939607 - 34939542
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctc 83  Q
    ||||||||||||| ||||| ||||||||| |||| |||| |||||| ||||||||| || ||||||    
T  34939607 gagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctc 34939542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 34939836 - 34939783
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| | ||||||||||||||||||||||||  |||||| |||||||||    
T  34939836 gagagcttacggaaacagcttatgacatgtccataaattgttttcagcttattt 34939783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 821891 - 821835
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||  || || ||||||||||| ||||||||||||| ||||||||||||    
T  821891 gagagcttatgggaataggttatgacatgttcataagctgttttcagcttattttca 821835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 1575838 - 1575786
Alignment:
Q  25 cttatgaaaacagcttatga-catgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| |||||||||||| |||||| | ||||||||||    
T  1575838 cttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttca 1575786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 7931705 - 7931757
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| |||||||||||| | |||| |||||| |||||||||    
T  7931705 agagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttattt 7931757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 32917289 - 32917245
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgttttt 64  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||    
T  32917289 gagagcttatggaaacaacttatgacatgtccataagcttttttt 32917245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 34404703 - 34404759
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||| | |||||||||||| ||||||||||||| ||| ||||||||    
T  34404703 gagaacttatgaaaatatcttatgacatgtacataagctgttttcagcatattttca 34404759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 725631 - 725686
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| |||||||||||||| ||  || |||| |||||||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgtagactattttcagcttattt 725686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 11600861 - 11600908
Alignment:
Q  29 tgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||||| || || |||| ||||||||||||    
T  11600861 tgaaaacagcttatgacatgtccaaaaactattttcagcttattttca 11600908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 28467897 - 28467862
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28467897 cttatgacatgtccataagctgtttctagcttattt 28467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 34538194 - 34538249
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| ||||| ||||||||||| ||||||||||||| || |||| |||||||||    
T  34538194 gagagatcttataaaaacagcttacgacatgtccataaactattttcagcttattt 34538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 34735836 - 34735871
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34735836 cttatgacatgtccataagctgtttctagcttattt 34735871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 283176 - 283134
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||| || |||| |||||||||    
T  283176 aaaacagcttatgacatgtccataaactattttcagcttattt 283134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 769225 - 769187
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  769225 cttatgaaaacatcttatgacatgttcataagctgtttt 769187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 1810282 - 1810336
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||||| || ||| ||||||||||||||| ||| |||||||||    
T  1810282 agagagcttattaaaacaactaatggcatgtccataagctgctttcagcttattt 1810336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 3775107 - 3775157
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    |||||||||  |||||||||||||||||| ||||| ||||||| |||||||    
T  3775107 agagcttatagaaacagcttatgacatgtgcataaactgttttcagcttat 3775157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 4006805 - 4006743
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctc 83  Q
    ||||||| |||||||| |||| || ||||||||||| | |||| |||||||||||| ||||||    
T  4006805 agagcttgtgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctc 4006743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 6310228 - 6310266
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  6310228 gagagcttatgaaaacaacttatgacatgtctataagct 6310266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 9041438 - 9041476
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  9041438 gagagcttacgaaaatagcttatgacatgtccataagct 9041476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 10616519 - 10616573
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||| ||||| |||||||||||||| |||| ||| || ||||||||||    
T  10616519 gagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttt 10616573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 10616691 - 10616745
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||| ||||| |||||| |||||||||||| ||||||||||||| || |||||||    
T  10616691 gagaacttatcaaaacaccttatgacatgttcataagctgttttcagtttatttt 10616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 27857450 - 27857412
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  27857450 gagagcttatgaaaacaacttatgacatctccataagct 27857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 32976069 - 32976027
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  32976069 agagcttatagaaacagcttatgacatttccataagctgtttt 32976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 2514684 - 2514647
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  2514684 ttgactttattttatcttttattatagaaatagcttat 2514647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 3738149 - 3738108
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||||||| ||| | |||||||    
T  3738149 aaacagcttatgacatgtccataagctgctttcaacttattt 3738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4249025 - 4248988
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  4249025 agagcttatgaaaacaccttatggcatgtccataagct 4248988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 7785734 - 7785775
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| ||||| |||||| |||||||||    
T  7785734 aaacagcttatgacatgtctataagttgttttcagcttattt 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 8348320 - 8348260
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgttttt--agcttattttca 76  Q
    ||||||||||| ||||||| ||||| ||||| ||||||| |||||||  ||||||||||||    
T  8348320 gagagagcttacgaaaacaacttataacatgaccataagttgttttttcagcttattttca 8348260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 9667975 - 9668016
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| |||||||||||||||||||||||||| | |||||||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttattt 9668016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 30784632 - 30784595
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  30784632 agcttatgaaatgtccataagctgttttgagcttattt 30784595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 31958562 - 31958615
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||   | ||||||||||| ||| |||||||||||||||||    
T  31958562 gagagcttatgaaaaccattaatgacatgtccttaatctgtttttagcttattt 31958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 32386087 - 32386140
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| ||||||||||  ||||||||||||| |||||| |||||| |||||    
T  32386087 agcttatggaaacagcttacaacatgtccataagttgttttcagcttactttca 32386140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 33089599 - 33089542
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||||||||||||||||| |||||||  ||||| ||||||  |||||||||||    
T  33089599 agagaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttca 33089542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 2458941 - 2458993
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| | |||| ||||| ||||||||||| | |||||||||    
T  2458941 agagcttatgaaaacatcctatgccatgttcataagctgttatcagcttattt 2458993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 3155266 - 3155214
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||  | ||| ||||||||||||| |||||||||||| |||||||||    
T  3155266 agagcttatatacacaacttatgacatgtctataagctgttttcagcttattt 3155214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 4246500 - 4246448
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||| || ||||| || ||||||||||||||||||||||| | ||||||||    
T  4246500 gagcttttggaaacaactcatgacatgtccataagctgttttcaacttatttt 4246448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 4420734 - 4420682
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||  |||||  ||||||||||| ||||||||||||| |||||||||    
T  4420734 agagcttatagaaacaaattatgacatgttcataagctgttttcagcttattt 4420682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 9093533 - 9093589
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttc 75  Q
    ||||||||||||||| ||||||||||| |||  |||| ||||||| |||||||||||    
T  9093533 gagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttc 9093589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 13908539 - 13908499
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  13908539 agcttatgacatgttcgtaagctgttttcagcttattttca 13908499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 20368158 - 20368214
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||| |||||||||||| ||||||||  ||| | ||||||||||    
T  20368158 gagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttca 20368214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 21959713 - 21959673
Alignment:
Q  100 aaattgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  21959713 aaattgactttattttatcttttgttatggaaatagcttat 21959673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 27894122 - 27894082
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||| |||||||||| ||||||| ||||||||||||    
T  27894122 agcttatgatatgtccataaactgttttcagcttattttca 27894082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 29940781 - 29940741
Alignment:
Q  100 aaattgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||||||| |||||||| ||||||||| |||||||    
T  29940781 aaattgactttattttatcttttgttatagaaaaagcttat 29940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 30524024 - 30523976
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||  ||||||||||||||| || || |||||||||||||    
T  30524024 cttatgaaaacaaattatgacatgtccattagttgcttttagcttattt 30523976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 33498710 - 33498658
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| ||||||||||||| ||| | | |||| |||||||||    
T  33498710 agagcttatgaaaacaacttatgacatgtctataggttattttcagcttattt 33498658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 34544127 - 34544175
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| ||||||||||||||||| || |||| | |||||||    
T  34544127 cttatgaaaacagtttatgacatgtccataaactattttcatcttattt 34544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 5046 - 4998
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5046 cttatgaaaacagcttatgacatgtccataagctgattttagcttattt 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27290880 - 27290932
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  27290880 agagcttatgaaaacagcttatgacatgcccataagctgttttcagcttattt 27290932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 48048962 - 48049042
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||||| || || ||||||||||||||||||||||| ||||||||| || |||||| ||| ||| ||||||||||    
T  48048962 gagcttatgaaaccaactcatgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaa 48049042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 24624301 - 24624250
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  24624301 agagcttatgaaaacagcttatgacatgtccataaactgttttcagcttatt 24624250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 39723383 - 39723429
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  39723383 cttatgaaaacagcttatgacatgttcataagctgtttttagcttat 39723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 21574582 - 21574529
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  21574582 gagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttattt 21574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 2413655 - 2413706
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  2413655 gagagagcttatgaaaacggctcatgacatgtccatgagctgtttttagctt 2413706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 5391966 - 5391915
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  5391966 cttatgaaaacagcttatgacatgttcataagctgttttcaacttattttca 5391915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 3015822 - 3015875
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||||||||||||| ||||||||||||||||||| |||||| | ||||||||    
T  3015822 agagcttatgaaaacaacttatgacatgtccataagatgttttcatcttatttt 3015875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 20192582 - 20192627
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  20192582 gagagagcttatagaaacagcttatgacatgtccataagctgtttt 20192627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 42817198 - 42817251
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  42817198 gagagagcttatggaaacagcatatgacatgtccataagttgttttcagcttat 42817251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 54180770 - 54180811
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  54180770 aaacagcttatgacatgtccataagttgtttttagcttattt 54180811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 39723223 - 39723270
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  39723223 cttatcaaaacagcttatgacatgttcataagctgttttcagcttatt 39723270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 45541658 - 45541611
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||    
T  45541658 cttatgaaaacagcttatgacatgttcataagctgttttcaggttatt 45541611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 11040590 - 11040648
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||||||  ||||||||||||||||| ||||||  |||||||||||    
T  11040590 gagagagcatatgaaaacagagtatgacatgtccataagttgttttcggcttattttca 11040648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 24281141 - 24281063
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggcta 96  Q
    ||||||||||||||||||| ||||||| || |||||||| |||||| | |||| ||||| || ||| ||||||| ||||    
T  24281141 gagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctctccatgatagcta 24281063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 25182963 - 25183009
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgttttt 64  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||    
T  25182963 gagagagcttatgaaaacaacttatgacatatccataagctattttt 25183009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 30923883 - 30923929
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagcttattt 30923929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 36101650 - 36101604
Alignment:
Q  30 gaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||    
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttca 36101604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 36139960 - 36139914
Alignment:
Q  30 gaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||    
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttca 36139914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 51130842 - 51130760
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||||    ||||||||||||||||| || ||| ||||||||||||| | ||| ||||||| ||| ||||||    
T  51130842 gagagcttatgaaaaccatgtatgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaa 51130760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 21367760 - 21367703
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||||||||||||| ||| || |||||||||| ||||||||||||    
T  21367760 gagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttca 21367703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 37273226 - 37273173
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||| | |||||||    
T  37273226 gagagcttatggaaacaacttatgacatgtccataagttgttttcaacttattt 37273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 41724299 - 41724250
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||| ||||| ||||||||||||||||||| |||||| ||||||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 49772646 - 49772695
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||||||||| ||||| ||||||| ||||||||||||| ||||||||||    
T  49772646 gagagcttatggaaacaacttatgagatgtccataagctttttttagctt 49772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 53762381 - 53762426
Alignment:
Q  29 tgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  53762381 tgaaaacagcttatgacatgttcataagctgttttcaacttatttt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 53952141 - 53952084
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||||||||||||||| || |||||| ||| ||||||||| ||||||||||||    
T  53952141 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 53952084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 905055 - 905095
Alignment:
Q  100 aaattgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  905055 aaattgactttattttatcttttgttatagaaatagcttat 905095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 40880924 - 40880980
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||||||||||| ||||||||||| || |||| |||||| | ||||||||    
T  40880924 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 40880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 47132088 - 47132032
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||| |||||||||||| |||||| ||| ||||||| ||||||| ||||||||||    
T  47132088 gagagaacttatgaaaacaacttatgtcatatccataaactgttttcagcttatttt 47132032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 1217779 - 1217834
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| | ||||||||||||||||||||||||| |||||| | |||| |||||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttca 1217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 4401127 - 4401080
Alignment:
Q  30 gaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttca 4401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 24604995 - 24605038
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||    
T  24604995 gagagcttatgcaaacagtttataacatgtccataagctgtttt 24605038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 30750084 - 30750049
Alignment:
Q  28 atgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  30750084 atgaaaacaacttatgacatgtccataagctgtttt 30750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 31010491 - 31010444
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||||    
T  31010491 agcttatagaaacaacttatgacatgtccataagctgttttcagctta 31010444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 36200190 - 36200135
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| || || ||||| ||||||||||||||||||| |||||| |||||||||    
T  36200190 gagagagtttttgtaaacaacttatgacatgtccataagttgttttcagcttattt 36200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 39602189 - 39602244
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| |||||||||||||||| |||||  |||||| | ||||||||||    
T  39602189 agagcttatgaagacagcttatgacatgttcataaattgttttcaacttattttca 39602244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 47249469 - 47249520
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||  |||||||||||| |||||| ||||||| |||||||||||    
T  47249469 cttatgaaaaccacttatgacatgttcataagttgtttttggcttattttca 47249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 50952415 - 50952372
Alignment:
Q  30 gaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||    
T  50952415 gaaaacagcttatgacatgttcataaactgttttaagcttattt 50952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 402526 - 402576
Alignment:
Q  27 tatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||| |||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttca 402576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 11039318 - 11039368
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    |||||||||| |||||  |||||||||||||||||| |||||| |||||||    
T  11039318 agagcttatggaaacatattatgacatgtccataagttgttttcagcttat 11039368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 13804856 - 13804814
Alignment:
Q  33 aacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  13804856 aacaacttatgacatgtccataagctgttttcaacttattttc 13804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 16790364 - 16790481
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa-----ttgactttattatatcttt 121  Q
    |||||||| ||||||||||| |||||||||||||||| || ||||||||| || ||  ||| ||| ||| ||||||     |||| |||||| ||||| |    
T  16790364 tatgaaaatagcttatgaca-gtccataagctgttttcagtttattttcataagctatccaagatagcttatgaaaataatttgattttattttatctgt 16790462  T
Q  122 tcttatagaaatagcttat 140  Q
    | ||||| |||||||||||    
T  16790463 tgttataaaaatagcttat 16790481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 27787100 - 27787054
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||||||||||| |||||| |||||| ||||||||||||| |||||    
T  27787100 agcttatgaaaacggcttatcacatgttcataagctgttttcagctt 27787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 34254789 - 34254839
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| ||||||||| ||||||||||  ||| |||||||||    
T  34254789 agcttatgaaaacagtttatgacatatccataagctactttcagcttattt 34254839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 40122734 - 40122784
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| || ||||||||| || ||||| ||||||||||||||||    
T  40122734 agcttatgaaaatagtttatgacatctctataagttgtttttagcttattt 40122784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 1395653 - 1395616
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  1395653 ttgactttattttatcttttgttatagaaatagcttat 1395616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 5166404 - 5166359
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||||| ||||||||||||| | ||||||||||    
T  5166404 aaaacagcatatgacatgttcataagctgttttcatcttattttca 5166359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 5431103 - 5431054
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    ||||||||||| || ||||| |||||| |||||||||||||| |||||||    
T  5431103 agagcttatgacaatagcttgtgacatttccataagctgtttatagctta 5431054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 12923319 - 12923356
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  12923319 agcttatgacatgtccataagttgttttcagcttattt 12923356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 22214641 - 22214690
Alignment:
Q  24 gcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| | | | |||||||||||||||||||||| |||||||||    
T  22214641 gcttatgaaaaaaacatttgacatgtccataagctgttttcagcttattt 22214690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 24785281 - 24785244
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24785281 agcttatgacatgttcataagttgtttttagcttattt 24785244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 36338651 - 36338594
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||||||||| ||||||||||||||||||||  ||||| | ||||  ||||||||||    
T  36338651 gagagagcttacgaaaacagcttatgacatgtttataagatattttatgcttattttc 36338594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 36646360 - 36646413
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||  |||||| ||||||||||||||||||| | |||||||    
T  36646360 gagagcttatggaaaccacttatggcatgtccataagctgttttcatcttattt 36646413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 49587004 - 49587041
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  49587004 ttgactttattttatcttttgttatagaaatagcttat 49587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3044249 - 3044293
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| |||||||||||| ||||||||||||| | ||||||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttca 3044293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 3194250 - 3194298
Alignment:
Q  29 tgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||||| |  ||||||||||||||||||||||||||    
T  3194250 tgaaaacaacttatgacattgatcataagctgtttttagcttattttca 3194298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 5396277 - 5396233
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||    
T  5396277 aaacagcttatgacatgttaataaggtgttttcagcttattttca 5396233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 23314540 - 23314484
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||| |||||||||||||| |||||| | ||||||| ||| |||||    
T  23314540 gagagcttttgaaaatagcttatgacatgttcataagttatttttagtttactttca 23314484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 26599235 - 26599195
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| ||||||||||| ||| ||||||||||||    
T  26599235 agcttatgacatatccataagctgatttcagcttattttca 26599195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 30443985 - 30443929
Alignment:
Q  21 agagcttatgaaaacagcttatgac-atgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||| || | || ||||| |||| ||||||||||||    
T  30443985 agagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttca 30443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 30573892 - 30573948
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||||  ||||| ||||| ||||||||||||| ||||||| ||||    
T  30573892 gagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttca 30573948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 31403223 - 31403187
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttatt 72  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  31403223 agcttatgtcatgtccataagctgttttcagcttatt 31403187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 31710868 - 31710924
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||||| |||||| ||||||||||| |||| ||||||||| |||||| || |||||    
T  31710868 agcttataaaaacaacttatgacatgcccatgagctgttttcagcttaattccaaaa 31710924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 31711123 - 31711179
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||||| |||||| ||||||||||| |||| ||||||||| |||||| || |||||    
T  31711123 agcttataaaaacaacttatgacatgcccatgagctgttttcagcttaattccaaaa 31711179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 43115147 - 43115095
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||| ||||| ||||||||||||||||||  |||||| |||||||||    
T  43115147 agagtttatggaaacaacttatgacatgtccataacttgttttcagcttattt 43115095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 50004739 - 50004691
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| ||||| |||||||||||| | ||||||||||| |||||||||    
T  50004739 cttatggaaacaacttatgacatgttcttaagctgttttcagcttattt 50004691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 51206476 - 51206532
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| |||| |||||||||||||| | |||| ||| |||||| ||||||||||||    
T  51206476 gagagcatatggaaacagcttatgacctatccaaaagttgttttcagcttattttca 51206532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 54837018 - 54837066
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||||||||||||||||||||| |||||  ||||||  |||||||||    
T  54837018 ttatgaaaacagcttatgacatgttcataacttgttttccgcttatttt 54837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 9613 - 9671
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  9613 gagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 43219787 - 43219833
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43219787 cttatgaaaacagcttatgacatgttcataagctgtttttagcttat 43219833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 33894719 - 33894666
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  33894719 gagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttattt 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 46082128 - 46082072
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||    
T  46082128 gagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttca 46082072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 15740394 - 15740445
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  15740394 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttca 15740445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 30496799 - 30496740
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaa 77  Q
    |||||||||||||||||||||||||| |||| || |||| |||||| |||||||||||||    
T  30496799 gagagagcttatgaaaacagcttatggcatgcccgtaagttgttttcagcttattttcaa 30496740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 36598332 - 36598387
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||    
T  36598332 gagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 13960699 - 13960757
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||| ||| ||||||||||| | || ||||||||||||    
T  13960699 gagagagcttatgaaaacagcttataacaagtccataagctatgttcagcttattttca 13960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 29287318 - 29287266
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| ||||||||    
T  29287318 agagcttatgaaaatagcttatgacatgtccataaattgtttttggcttattt 29287266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 753056 - 753005
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||| ||||||||| || ||||||||||||||||| |||||||    
T  753056 cttatgaaaacagtttatgacatatcaataagctgtttttagctaattttca 753005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 12834941 - 12834992
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    |||| ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  12834941 agagattatggaaacagcttatgacatgtccataaactgttttcagcttatt 12834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27626099 - 27626154
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||| | |||||||    
T  27626099 gagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttattt 27626154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 33645937 - 33645992
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||||||||| ||||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttattt 33645992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 43219627 - 43219674
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  43219627 cttatcaaaacagcttatgacatgttcataagctgttttcagcttatt 43219674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 44615082 - 44615125
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  44615082 gagagcttatgaaaacaacttatgacatgtccacaagctgtttt 44615125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 44808245 - 44808194
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| | |||||||||||||||||| ||||||| ||||||||||||    
T  44808245 cttatgaaaataacttatgacatgtccataacctgttttcagcttattttca 44808194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 6857315 - 6857369
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||| | ||||||    
T  6857315 gagagagcttatggaaacagcttatgccatgtccataagttgttttcaacttatt 6857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 11047954 - 11047908
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  11047954 cttataaaaacaacttatgacatgttcataagctgtttttagcttat 11047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 28340398 - 28340436
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  28340398 gagagcttatgaaaacaacttatgacatgtccataagct 28340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 36538002 - 36537944
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| |||||| ||||| |||||||||||| |||||| |||||||||||| ||||||    
T  36538002 gagagaacttatggaaacaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 39539771 - 39539813
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  39539771 aaacaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 48157098 - 48157151
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||  ||||| |||||| ||||||||||||||||||| |||||||||    
T  48157098 gagagcttatagaaacaacttatgccatgtccataagctgttttcagcttattt 48157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 12110448 - 12110396
Alignment:
Q  24 gcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||| |||||||||||| || || |||||||||| |||||||||    
T  12110448 gcttatgaaaacaacttatgacatgttcacaaactgtttttagattattttca 12110396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 15740538 - 15740590
Alignment:
Q  25 cttatgaaaacagcttatga-catgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| |||||||||||| |||||| | ||||||||||    
T  15740538 cttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttca 15740590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19719099 - 19719047
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttat 71  Q
    ||||| |||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  19719099 agagaacttatgaaaacaacttatgacatgttcataaactgttttcagcttat 19719047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 31908281 - 31908321
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttag 66  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  31908281 ttatgaaaacaacttatcacatgtccataagctgtttttag 31908321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 11048114 - 11048067
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||| |||||| |||||||||||| ||||||||||||| ||||||||    
T  11048114 cttatcaaaacaacttatgacatgttcataagctgttttcagcttatt 11048067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 12234870 - 12234920
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||  ||||| ||||||||||||| |||||||||||| |||||||||    
T  12234870 agcttatagaaacaacttatgacatgtctataagctgttttcagcttattt 12234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 29290420 - 29290382
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgtttt 29290382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 41040256 - 41040186
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgat 91  Q
    |||||||||| |||||||||||||||| ||||| ||||||| | || |||||| || || ||| |||||||    
T  41040256 agagcttatggaaacagcttatgacatatccatgagctgttatgagtttatttccataaactctccatgat 41040186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 44687021 - 44686979
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||| ||||| |||||||||||||||| |||||||||    
T  44687021 agagcttatggaaacaacttatgacatgtccatgagctgtttt 44686979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 425813 - 425858
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||| |||||||| |||  ||||||||||||    
T  425813 aaaacagcttatgacatgttcataagctatttccagcttattttca 425858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 753186 - 753239
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctg-tttttagcttattt 73  Q
    |||||||||| ||| |||||||||||| || |||||||| ||||||||||||||    
T  753186 agagcttatggaaatagcttatgacatatctataagctgttttttagcttattt 753239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3500945 - 3500998
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||| | |||||||||||| ||| ||||||||| |||||||||    
T  3500945 gagagcttatggaaataacttatgacatgtacatcagctgttttcagcttattt 3500998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 4572583 - 4572542
Alignment:
Q  100 aaattgactttattatatcttttcttatagaaatagcttatg 141  Q
    |||||||||||||| |||||||| ||||||| ||||||||||    
T  4572583 aaattgactttattttatcttttgttatagatatagcttatg 4572542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 20553195 - 20553142
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||||||||| ||||||| |||||| |||||| || ||||||    
T  20553195 gagagcttatggaaacagcttacgacatgttcataagttgttttcagattattt 20553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 22387874 - 22387927
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| |||||| |||||  |||| ||||||||| |||||||    
T  22387874 gagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttattt 22387927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 25130078 - 25130123
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||| ||||||||||| ||||||||||||| ||| ||||||||    
T  25130078 aaaacagtttatgacatgttcataagctgttttcagcatattttca 25130123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27496386 - 27496438
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||    
T  27496386 gagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttattt 27496438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27503044 - 27503096
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||    
T  27503044 gagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttattt 27503096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 28844582 - 28844529
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||| |||||||| |||||||||||||||| || |||||| || ||||||    
T  28844582 gagagcttctgaaaacaacttatgacatgtccatcagttgttttcagtttattt 28844529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 39968013 - 39967956
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||| | ||||||||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttca 39967956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 42656497 - 42656460
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  42656497 ttgactttattttatcttttgttatagaaatagcttat 42656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 47042017 - 47042078
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacc 81  Q
    ||||||||||| |  |||||||| | ||||| || |||||||||||||||||||||| ||||    
T  47042017 gagagcttatggatgcagcttatcatatgtctattagctgtttttagcttattttcataacc 47042078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 47134746 - 47134791
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  47134746 aaaacaacttatgacacgtccataagttgttttcagcttattttca 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 1418414 - 1418382
Alignment:
Q  102 attgactttattatatcttttcttatagaaata 134  Q
    ||||||||||||||||||||| |||||||||||    
T  1418414 attgactttattatatcttttgttatagaaata 1418382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 3610723 - 3610771
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||| |||||||| |||||||||||||||||  |||| |||||||||    
T  3610723 cttatggaaacagctaatgacatgtccataagcctttttcagcttattt 3610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 5939176 - 5939124
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| ||||| || |||| |||||||||| || ||||||||||||||    
T  5939176 agagcttatggaaacaactgatgatatgtccataaactttttttagcttattt 5939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 6552286 - 6552326
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||| | ||||||||||||| ||||||||||||    
T  6552286 agcttatgacatattcataagctgttttcagcttattttca 6552326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 24363601 - 24363661
Alignment:
Q  42 tgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||| |||||| ||||||||| || |||||| ||| ||| ||| ||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaa 24363661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 28178950 - 28178914
Alignment:
Q  104 tgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||| |||||||| |||||||||||||||||    
T  28178950 tgactttattttatcttttgttatagaaatagcttat 28178914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 28520990 - 28521038
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagct 68  Q
    |||| |||||| ||||| ||||||||||||| |||||||||||| ||||    
T  28520990 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 28521038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 28691813 - 28691869
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| ||||||||||||||||||||| |||||||||  |||| | || |||||||||    
T  28691813 gagatcttatgaaaacagcttatgacttgtccataaattgttatcagtttattttca 28691869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 29768623 - 29768671
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||||||| |||||||||||||| ||||||| |||| | ||||||||    
T  29768623 ttatgaaaacggcttatgacatgtctataagctattttcaacttatttt 29768671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 30535655 - 30535599
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||| ||||||| |||| | ||||||||||| || |||||||||    
T  30535655 gagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttca 30535599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 32329161 - 32329113
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagct 68  Q
    ||||||||| |||| ||||||||||||||||| |||| |||||| ||||    
T  32329161 gagagcttaagaaagcagcttatgacatgtccctaagttgttttcagct 32329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 39551527 - 39551579
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||||| ||||| ||||||||||||||||||| |||| | |||||||||    
T  39551527 agaggttatggaaacaacttatgacatgtccataaggtgttgtcagcttattt 39551579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 46223057 - 46223101
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||    
T  46223057 ttatggaaacagcttgcgacatgtccataagctgttttcagctta 46223101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 47427279 - 47427335
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    ||||||||||||| ||||| |||||||||| || ||||||| |||  ||||||||||    
T  47427279 gagagagcttatggaaacaacttatgacatctctataagctatttcaagcttatttt 47427335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 13604825 - 13604883
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttca 13604883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 21768173 - 21768230
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  21768173 gagagtgcttatgaaaacagcttatgacatgtccatacgctgttttcaacttattttc 21768230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 14295600 - 14295548
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  14295600 gagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagctta 14295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 37794679 - 37794729
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttattt 37794729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 2568745 - 2568668
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||||||||||| | |||||| | |||||||||||||||||  | ||| ||||||| ||| ||||||    
T  2568745 cttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaa 2568668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 14331448 - 14331403
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14331448 aaaacagcttatgacatgtccataagctgatttcagcttattttca 14331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 17258868 - 17258917
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  17258868 tatgaaaatagcttatgacatgttcataagctgttttcagcttattttca 17258917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 11700356 - 11700412
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||    
T  11700356 gagagtttatggaaacaacttatgacatgtccataagctgttttcagattattttca 11700412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 17368770 - 17368686
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||| |||||||||||| |||||||||||| |||| || ||||| ||||||||| || |||||| ||| ||| ||| ||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaa 17368686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37611191 - 37611275
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||| || |||||| || || ||| ||| ||| ||| ||||||    
T  37611191 gagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaa 37611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37787921 - 37788005
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||| || |||||| || || ||| ||| ||| ||| ||||||    
T  37787921 gagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaa 37788005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 3280697 - 3280748
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||| | |||||||| ||||||| |||||||||    
T  3280697 cttatgaaaacagcttatgacatcttcataagctctttttagtttattttca 3280748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 35960507 - 35960452
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||| || || |||| |||||||||||||| ||||||||||||||||    
T  35960507 gagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttattt 35960452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 39105551 - 39105500
Alignment:
Q  26 ttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  39105551 ttatgaaaacagcttatgacattgttcataagctatttttagcttattttca 39105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 41957430 - 41957485
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||| | ||||||||||||||||||||||||| |||||| | ||||||||||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttca 41957485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 8090030 - 8089972
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||| ||||||| || | | ||||||||||| ||||||||||||    
T  8090030 gagagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattttca 8089972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 18857382 - 18857432
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||| |||||    
T  18857382 ttatgaaaacagctaatgacatgttcataagctgtttttaacttaatttca 18857432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 7808598 - 7808541
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||| ||||||||||||    
T  7808598 gagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattttca 7808541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 11457189 - 11457148
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgttt 62  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  11457189 agagcttatggaaacaacttatgacatgtccataagctgttt 11457148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 28586744 - 28586797
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||| |||||||||||| ||| ||||||||||| |||||||||    
T  28586744 gagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttattt 28586797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 30269711 - 30269764
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||    
T  30269711 gagagcttattaaaacaacttataacatgcccataagttgtttttagcttattt 30269764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 32172745 - 32172692
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||    
T  32172745 gagagcttatggaaacaacttatgacatgtccataagccattttcagcttattt 32172692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 38728494 - 38728441
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| |||||||||||||  | ||||||||||| |||||||||    
T  38728494 gagagcttatgaaaatagcttatgacatgctcctaagctgttttcagcttattt 38728441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 2569677 - 2569729
Alignment:
Q  24 gcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||| ||| |||||||||||||||||||||||||||| || |||| ||||    
T  2569677 gcttatggaaatagcttatgacatgtccataagctgttttaagtttatattca 2569729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 5531124 - 5531045
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||| ||||||| || || ||| ||| ||| ||| ||||||    
T  5531124 gagcttatgaaaacaacttatgatatgtccataagttgttttta-cttatttccagaagctctccaggattgcttatgaaa 5531045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 10152426 - 10152390
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataag 56  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10152426 gagagcttatgaaaacaacttatgacatgtccataag 10152390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 10907469 - 10907417
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| |||||| |||||| ||||||||||||  ||||||||    
T  10907469 agagcttatgaaaacaacttatgtcatgtcaataagctgttttcggcttattt 10907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 13194892 - 13194840
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| |||||| ||||||| ||||||||||| | ||||||||||||||||    
T  13194892 agagcttgtgaaaaaagcttataacatgtccatatgttgtttttagcttattt 13194840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 37968971 - 37968916
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||||| |||||||||| || || | |||||||||||||||||||||||||||||||    
T  37968971 gagagatcttatgaaaatagatt-taacatgtccataagctgtttttagcttatttt 37968916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 2092446 - 2092403
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  2092446 ttatggaaatagcttatgacatgtccataagctgttttttgctt 2092403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 3977395 - 3977344
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||||| | | |||||| || ||||||||||||    
T  3977395 cttatgaaaacagcttatgacatgttccttagctgtcttcagcttattttca 3977344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 8177511 - 8177566
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||| ||||||||||||| ||||||||||| |||||| || |||||||||    
T  8177511 agagctcatggaaacagcttatgatatgtccataagttgttttcaggttattttca 8177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 10125694 - 10125765
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatg 89  Q
    |||||| |||||| ||||| ||||||||||||  ||||| |||||| |||||||||||| || ||| |||||    
T  10125694 gagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatg 10125765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 15406001 - 15406048
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttcaaa 78  Q
    ||||||||||||||||||| ||||||||||||| |  |||||||||||    
T  15406001 aaaacagcttatgacatgttcataagctgttttcaatttattttcaaa 15406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 18853097 - 18853050
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| |||||| | || |||||||||||||||||||    
T  18853097 ttatgaaaacagcttacgacatgcctattagctgtttttagcttattt 18853050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 19177082 - 19177027
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| ||||||||| |  |||||||||||||||||| |||||| |||||||    
T  19177082 gagagagctaatgaaaacaaccgatgacatgtccataagctatttttaccttattt 19177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 26516500 - 26516457
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgttt 62  Q
    |||||||||||||||||||||||||| |||||||| || |||||    
T  26516500 agagagcttatgaaaacagcttatgatatgtccattagttgttt 26516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29363100 - 29363057
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  29363100 gagagcttatgaaaacaacttatgacatgcccataagttgtttt 29363057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 36542266 - 36542313
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| ||||| ||||||||||||||| |||||||||||| |||||||    
T  36542266 ttatggaaacatcttatgacatgtccagaagctgtttttaacttattt 36542313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 37526175 - 37526230
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| ||| | ||||||||||  |||||||||||| |||||||||    
T  37526175 gagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttattt 37526230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 37690612 - 37690667
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| ||| | ||||||||||  |||||||||||| |||||||||    
T  37690612 gagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttattt 37690667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 1899235 - 1899193
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| |||||| |||||| |||||||||    
T  1899235 aaaacagcttatgacatgtgcataagttgttttcagcttattt 1899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 10272421 - 10272491
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    ||||| |||||||||||||  |||| |||||| |||||||||||| || ||| ||| ||||||| ||||||    
T  10272421 aaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaa 10272491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 14364316 - 14364278
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataag 56  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  14364316 gagaaagcttatggaaacagcttatgacatgtccataag 14364278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 16380550 - 16380592
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||| ||||| |||||||||| |||||||||||||||||||||    
T  16380550 agagtttatggaaacagcttacgacatgtccataagctgtttt 16380592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 38047857 - 38047895
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  38047857 gagagcttatggaaacaacttatgacatgtccataagct 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 40499704 - 40499742
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  40499704 gagagcttatggaaacaacttatgacatgtccataagct 40499742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 499709 - 499762
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||||||||||||||||||||  | ||| |||||| |||||||||    
T  499709 gagaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttattt 499762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 4619799 - 4619746
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| || ||||||||| ||||||||| ||| | |||||||    
T  4619799 gagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttattt 4619746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 5284445 - 5284482
Alignment:
Q  39 ttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  5284445 ttatgacatgtccataagcttttttcagcttattttca 5284482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 6587096 - 6587141
Alignment:
Q  31 aaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||| || ||||||||||||  ||||||||||||    
T  6587096 aaaacagcttatgacaggttcataagctgtttacagcttattttca 6587141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 7096215 - 7096252
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  7096215 ttgactttattttatcttttgttatagaaatagcttat 7096252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 7985062 - 7985005
Alignment:
Q  20 gagagcttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    ||||||||| ||||||||||| |||| | || ||||||||||||| ||||||||||||    
T  7985062 gagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttca 7985005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 10640046 - 10639989
Alignment:
Q  20 gagagcttatgaaaacagcttatgaca-tgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||||||||||||||| | | |||||||| ||| |||||||||||||    
T  10640046 gagaacttatgaaaacagcttatgacatttttcataagctttttctagcttattttca 10639989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 11296978 - 11297015
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagct 58  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  11296978 agagcttatgaaaacaacttatgacctgtccataagct 11297015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 11707149 - 11707088
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    |||||| ||||| |||| || |||||||||||  ||||| |||||| |||||||||||||||    
T  11707149 gagagaacttatcaaaatagattatgacatgtttataagttgttttcagcttattttcaaaa 11707088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 12459986 - 12460035
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| |||||||||||| |||| | ||||||| |||||||||||    
T  12459986 tatgaaaacaacttatgacatgttcatatgttgtttttggcttattttca 12460035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 13264084 - 13264137
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||| ||||| |||||||||||| ||| | ||||||||||||| ||||||||||    
T  13264084 agagtttatggaaacagcttatgccatattcataagctgttttcagcttatttt 13264137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 35963333 - 35963280
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||| ||| ||| ||||||||||||||||| |||||| |||||||||    
T  35963333 gagaacttatggaaatagcgtatgacatgtccataagttgttttcagcttattt 35963280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 38338415 - 38338363
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| | ||||||||||||||||||||||||| ||  ||||||||||||    
T  38338415 gagagcttacggaaacagcttatgacatgtccataagttg-gtttagcttattt 38338363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 40205064 - 40205105
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttattt 40205105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 8089370 - 8089303
Alignment:
Q  25 cttatgaaaacagcttatgacatgt--ccataagctgtttttagcttattttcaaaacctcgccatga 90  Q
    |||||||||||||| ||||||||||   ||||| ||||||| |||||||||||| || ||| ||||||    
T  8089370 cttatgaaaacagcgtatgacatgtgctcataatctgttttcagcttattttcataagctctccatga 8089303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 10280664 - 10280704
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttatgca 143  Q
    ||||||||||| |||||||| ||||||||||||| ||||||    
T  10280664 ttgactttattctatcttttgttatagaaatagcatatgca 10280704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 15905376 - 15905404
Alignment:
Q  18 gagagagcttatgaaaacagcttatgaca 46  Q
    |||||||||||||||||||||||||||||    
T  15905376 gagagagcttatgaaaacagcttatgaca 15905404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 18700475 - 18700427
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagctt 69  Q
    |||||||||| ||||| ||||||||||||| ||||| |||||| |||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcagctt 18700427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 35960396 - 35960356
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttatgca 143  Q
    ||||||||||| |||||||| |||||||||||| |||||||    
T  35960396 ttgactttattttatcttttattatagaaatagtttatgca 35960356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 37489065 - 37489105
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgttttta 65  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  37489065 cttatgaaaacaacttatgacatgttgataagctgttttta 37489105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 40159909 - 40159853
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtc-cataagctgtttttagcttattttca 76  Q
    ||||||||  |||||| ||||||||||||  |||||||| |||||||||||||||||    
T  40159909 agagcttagaaaaacaacttatgacatgtttcataagctatttttagcttattttca 40159853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 42099862 - 42099906
Alignment:
Q  33 aacagcttatgacat-gtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||| || |||||||||||||| |||||||||||    
T  42099862 aacagcttatgacattgttcataagctgtttttggcttattttca 42099906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 2996667 - 2996609
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||    
T  2996667 gagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttca 2996609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 1966031 - 1965980
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  1966031 gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttattt 1965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 18011963 - 18011907
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||||| | ||||  |||||| ||||||||||||||||||    
T  18011963 gagagcttatgaaaacagcttataatatgtatataagccgtttttagcttattttca 18011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 27721810 - 27721754
Alignment:
Q  19 agagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttc 75  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||| |||||||||||    
T  27721810 agagagcttataaaaactacttatgacatatccataagctgttttcagcttattttc 27721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 52754690 - 52754638
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||    
T  52754690 agagcttatgaaaacagtttatgacgtgtccataagctgctttcagcttattt 52754638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 53315418 - 53315362
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||||||| | ||| ||||||||||||||| |||||| ||||||||||    
T  53315418 gagagcttatgaaaacaacatatcacatgtccataagctatttttaacttattttca 53315362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 29467605 - 29467655
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  29467605 agcttatagaaacggcttatgacatgtccataagctgttttcagcttattt 29467655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 33534145 - 33534203
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||  || |||||| |||||||| |||||| ||||||||||||    
T  33534145 gagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttca 33534203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3176082 - 3176135
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||| |||||| |||||| ||||| |||||| |||||||||    
T  3176082 gagagcttatgaaaacatcttatgtcatgtctataagttgttttcagcttattt 3176135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 4798545 - 4798626
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 102  Q
    |||||||||| |||| |||| |||||||| ||||||||||||| ||||||||| || || ||| ||| ||| ||| ||||||    
T  4798545 agagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaa 4798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 21953040 - 21952987
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||| | |||||||||||||||||| |||||||||| ||||||    
T  21953040 gagagcttatggaaagaacttatgacatgtccataacctgtttttagtttattt 21952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 1075532 - 1075484
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttcaaaac 80  Q
    |||||||||||||||||||||||| | ||||| ||||||||||| ||||    
T  1075532 aaacagcttatgacatgtccataaacagttttaagcttattttctaaac 1075484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 21683505 - 21683545
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagct 58  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  21683505 gagagagcttatgaaaacaacttatgacaagtccataagct 21683545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 23819180 - 23819128
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| ||| ||||||||||||||||||||||||||| |||||| | |||||||    
T  23819180 agagtttaagaaaacagcttatgacatgtccataagttgttttcatcttattt 23819128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 6428112 - 6428057
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||| ||||||||||| ||||||||||||||||||| || ||| ||| |||||    
T  6428112 gagagagattatgaaaacaacttatgacatgtccataagttgatttaagcatattt 6428057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 27970150 - 27970107
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||||    
T  27970150 gagagtttatgaaaacaacttatgacatgtctataagctgtttt 27970107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 28614787 - 28614842
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||| |||||  ||||||||| |||||||||| |||| ||||||||||||    
T  28614787 agagcttatggaaacaatttatgacatatccataagctcttttcagcttattttca 28614842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 30207547 - 30207602
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| | |||||| |||||||||||  ||||||||||| |||||||||    
T  30207547 gagagagcttataagaacagcatatgacatgtctgtaagctgttttcagcttattt 30207602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 32071954 - 32071907
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  32071954 ttatggaaacaacttatgacacgtccataagctgttttaagcttattt 32071907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 2980445 - 2980499
Alignment:
Q  22 gagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||| ||| || |||||||||||||||||||||| || ||||||||||||    
T  2980445 gagcctatggaaataggttatgacatgtccataagctgtgttcagcttattttca 2980499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 6978958 - 6978996
Alignment:
Q  38 cttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  6978958 cttatgacatgtctataagctgttttcagcttattttca 6978996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 9680762 - 9680704
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||| ||| |||||||||||||| ||||||||||| |||||| ||| | |||||||||    
T  9680762 agagcatataaaaacagcttatgatatgtccataagttgttttcagcgttttttcaaaa 9680704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 17822849 - 17822899
Alignment:
Q  27 tatgaaaacagcttatgacatgtc-cataagctgtttttagcttattttca 76  Q
    ||||||||||||||||||||| |  |||||||| |||||||||||||||||    
T  17822849 tatgaaaacagcttatgacatttttcataagctttttttagcttattttca 17822899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25571352 - 25571298
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatttt 74  Q
    |||| |||||| |||||| |||||| |||| ||||||||||||| ||||||||||    
T  25571352 gagaacttatggaaacagtttatgatatgttcataagctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 30632043 - 30631989
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcaaaa 79  Q
    ||||| |||||| |||||| ||||| ||||||||||||| ||||||||| |||||    
T  30632043 cttataaaaacaacttatggcatgttcataagctgttttaagcttatttccaaaa 30631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 50800020 - 50800066
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattttcaaa 78  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  50800020 aaacaacttatgacatgtctataagctgttttcagcttatttccaaa 50800066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1137804 - 1137751
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||| |||||||||||| |||||||||||| |||||| |||||| || ||||||    
T  1137804 gagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttattt 1137751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 4684083 - 4684136
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||  |||| | |||| ||||||||| |||||||||||||||||||||    
T  4684083 gagagcttagtaaaataacttaagacatgtccgtaagctgtttttagcttattt 4684136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 9841137 - 9841100
Alignment:
Q  40 tatgacatgtccataagctgttttt-agcttattttca 76  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9841137 tatgacatgtccataagctgtttttcagcttattttca 9841100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 13140190 - 13140153
Alignment:
Q  26 ttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||||||||||||||  |||||||||||||||    
T  13140190 ttatgaaaacagcttatgacacatccataagctgtttt 13140153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 19305006 - 19304969
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagctt 69  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  19305006 aaacagcttatgacatgtccataagttgttttcagctt 19304969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 19422400 - 19422363
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  19422400 ttgactttattatatcttttgttatagaaataacttat 19422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 21157848 - 21157807
Alignment:
Q  32 aaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  21157848 aaacagcttatgacatttacaaaagctgtttttagcttattt 21157807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 22684515 - 22684552
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  22684515 agcttatgatatgtccataagctgttttcagcttattt 22684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37863930 - 37863975
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||| |||||||||||||||||||||| || |||||| ||||||    
T  37863930 gagagaacttatgaaaacagcttatgacacgttcataagttgtttt 37863975  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 51044547 - 51044584
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  51044547 ttgactttattttatcttttgttatagaaatagcttat 51044584  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 52746825 - 52746874
Alignment:
Q  27 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||| |||||||||| ||||||| ||||||||||||| |||| |||||||    
T  52746825 tatggaaacagcttaagacatgttcataagctgttttcagctgattttca 52746874  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 55870318 - 55870363
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||| |||||||||||| || ||||||| |||||||||||||||||    
T  55870318 gagatagcttatgaaaaaagtttatgacctgtccataagctgtttt 55870363  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 7029405 - 7029369
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagctta 139  Q
    |||||| |||| |||||||||||||||||||||||||    
T  7029405 ttgactctattttatcttttcttatagaaatagctta 7029369  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 20936212 - 20936260
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||| ||||||| |||| ||||||||||||| | |||||||    
T  20936212 cttatgaaaacaacttatgatatgttcataagctgttttcaccttattt 20936260  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 21043213 - 21043269
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||| ||||| ||||||||||||||| || ||||||||||||| ||  ||||||||    
T  21043213 gagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttca 21043269  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 22236083 - 22236139
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||| ||| |||||||||| |||||||| ||| |||||||||  |||||||||||    
T  22236083 gagagcctattaaaacagcttgtgacatgttcatgagctgttttctgcttattttca 22236139  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27122143 - 27122195
Alignment:
Q  21 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||||||||||| | |||| ||||| ||||||||||| | |||||||||    
T  27122143 agagcttatgaaaacatcctatgccatgttcataagctgttatcagcttattt 27122195  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 30024782 - 30024742
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttattttca 76  Q
    |||||||||||||||||||  ||||||| ||||||||||||    
T  30024782 agcttatgacatgtccatatactgttttcagcttattttca 30024742  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 43886114 - 43886162
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||||||||||| ||| | |||||||| |||| |||||||||    
T  43886114 cttatgaaaacagcttatggcattttcataagctattttcagcttattt 43886162  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 44019504 - 44019472
Alignment:
Q  104 tgactttattatatcttttcttatagaaatagc 136  Q
    |||||||||| ||||||||||||||||||||||    
T  44019504 tgactttattttatcttttcttatagaaatagc 44019472  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 44938810 - 44938754
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataagctg-tttttagcttattt 73  Q
    |||||| ||||||||||||| ||||||||| | |||||| || ||||||||||||||    
T  44938810 gagagaacttatgaaaacaggttatgacatattcataagatgttttttagcttattt 44938754  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 49939933 - 49939981
Alignment:
Q  25 cttatgaaaacagcttatgaca-tgtccataagctgtttttagcttatt 72  Q
    |||||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  49939933 cttatgaaaagagcttatgacattgttcataagctgttttcagcttatt 49939981  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 51555884 - 51555920
Alignment:
Q  36 agcttatgacatgtccataagctgtttttagcttatt 72  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  51555884 agcttataacatgtccataagctgttttcagcttatt 51555920  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 51560267 - 51560319
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttatt 72  Q
    |||| |||||||||||| ||||| |||||| |||||  |||||||||||||||    
T  51560267 gagaccttatgaaaacaccttatcacatgttcataacttgtttttagcttatt 51560319  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 53155352 - 53155296
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttca 76  Q
    ||||||||||| ||||| ||||||||||||| ||||  || ||| ||||||||||||    
T  53155352 gagagcttatgcaaacaacttatgacatgtctataaattgctttcagcttattttca 53155296  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 306414 - 306368
Alignment:
Q  24 gcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  306414 gcttatggaaacagcttatgacatgcccataagctgttttcagctta 306368  T

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Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 9775 - 9813
Alignment:
Q  18 gagagagcttatgaaaacagcttatgacatgtccataag 56  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  9775 gagagagtttatgaaaacagtttatgacatgtccataag 9813  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 10598 - 10648
Alignment:
Q  23 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    |||||||| ||||| || |||||||||||||||| |||||| |||||||||    
T  10598 agcttatgtaaacaactaatgacatgtccataagttgttttcagcttattt 10648  T

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Target: scaffold0147 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 12682 - 12732
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagctta 70  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||| ||||||    
T  12682 gagaccttatggaaacaacttatgacatgtccataagttgttttcagctta 12732  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 68962 - 69000
Alignment:
Q  25 cttatgaaaacagcttatgacatgtccataagctgtttt 63  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  68962 cttatgaaaacagcgtatgacatgtctataagctgtttt 69000  T

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Target: scaffold0590 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 1162 - 1199
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  1162 ttgactttattttatcttttgttatagaaatagcttat 1199  T

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Target: scaffold0275 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 2813 - 2776
Alignment:
Q  103 ttgactttattatatcttttcttatagaaatagcttat 140  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  2813 ttgactttattttatcttttgttatagaaatagcttat 2776  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 27668 - 27615
Alignment:
Q  20 gagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattt 73  Q
    ||||||||||| ||| ||||||||||||| | ||||| |||||| |||||||||    
T  27668 gagagcttatggaaatagcttatgacatggctataagttgttttcagcttattt 27615  T

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