View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3767_high_10 (Length: 374)

Name: NF3767_high_10
Description: NF3767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3767_high_10
NF3767_high_10
[»] chr7 (41 HSPs)
chr7 (1-367)||(28520826-28521193)
chr7 (141-270)||(12234801-12234930)
chr7 (141-204)||(33645939-33646002)
chr7 (144-215)||(48157087-48157158)
chr7 (159-199)||(29290380-29290420)
chr7 (142-198)||(39551532-39551588)
chr7 (136-215)||(4966180-4966259)
chr7 (159-206)||(45078325-45078372)
chr7 (156-230)||(12834914-12834988)
chr7 (156-194)||(39539769-39539807)
chr7 (159-261)||(44615025-44615127)
chr7 (151-204)||(36537947-36538000)
chr7 (161-201)||(941589-941629)
chr7 (156-204)||(19719050-19719098)
chr7 (156-204)||(36598334-36598382)
chr7 (159-199)||(44686977-44687017)
chr7 (132-204)||(46082056-46082128)
chr7 (156-203)||(11048071-11048118)
chr7 (141-228)||(20553132-20553219)
chr7 (156-263)||(23214899-23215006)
chr7 (157-204)||(23434137-23434184)
chr7 (127-198)||(39334208-39334279)
chr7 (127-198)||(39360038-39360109)
chr7 (159-201)||(1645681-1645723)
chr7 (146-204)||(3500945-3501003)
chr7 (161-199)||(5006494-5006532)
chr7 (161-203)||(15740390-15740432)
chr7 (141-215)||(22387863-22387937)
chr7 (141-199)||(27626106-27626164)
chr7 (169-215)||(29574592-29574638)
chr7 (132-198)||(39568308-39568374)
chr7 (166-204)||(47427281-47427319)
chr7 (141-246)||(752998-753103)
chr7 (156-197)||(9872916-9872957)
chr7 (158-215)||(30535609-30535666)
chr7 (127-196)||(39345486-39345555)
chr7 (145-205)||(27496385-27496444)
chr7 (145-205)||(27503043-27503102)
chr7 (145-205)||(27517834-27517893)
chr7 (163-199)||(30134100-30134136)
chr7 (143-199)||(44808189-44808245)
[»] chr1 (37 HSPs)
chr1 (142-217)||(4549260-4549335)
chr1 (157-196)||(15581299-15581338)
chr1 (157-199)||(17628644-17628686)
chr1 (142-264)||(33723300-33723422)
chr1 (128-228)||(44031953-44032053)
chr1 (156-263)||(601085-601191)
chr1 (145-216)||(15579515-15579586)
chr1 (141-228)||(31517694-31517781)
chr1 (155-194)||(35350683-35350722)
chr1 (142-204)||(28689430-28689492)
chr1 (141-261)||(4549462-4549583)
chr1 (161-250)||(15709898-15709987)
chr1 (141-194)||(26184777-26184830)
chr1 (128-208)||(11639390-11639470)
chr1 (142-198)||(19412581-19412637)
chr1 (132-268)||(37593598-37593734)
chr1 (141-200)||(4699597-4699656)
chr1 (144-215)||(28389060-28389131)
chr1 (156-215)||(38170657-38170716)
chr1 (142-205)||(43029379-43029442)
chr1 (159-246)||(44928127-44928214)
chr1 (156-199)||(45327624-45327667)
chr1 (166-204)||(17631080-17631118)
chr1 (145-199)||(30418165-30418218)
chr1 (144-205)||(36514652-36514714)
chr1 (156-193)||(3223711-3223748)
chr1 (141-194)||(27140507-27140560)
chr1 (159-228)||(32515395-32515464)
chr1 (145-202)||(35925723-35925780)
chr1 (166-215)||(37175891-37175940)
chr1 (156-192)||(3070080-3070116)
chr1 (156-204)||(4481974-4482022)
chr1 (156-196)||(6231802-6231842)
chr1 (171-215)||(24279808-24279852)
chr1 (156-204)||(29635391-29635439)
chr1 (159-203)||(29723536-29723580)
chr1 (141-208)||(43338145-43338212)
[»] chr3 (38 HSPs)
chr3 (158-264)||(45541617-45541723)
chr3 (144-215)||(37273166-37273237)
chr3 (141-199)||(31010431-31010489)
chr3 (156-197)||(30923883-30923924)
chr3 (156-201)||(41724256-41724301)
chr3 (141-198)||(43115085-43115142)
chr3 (141-204)||(20192584-20192647)
chr3 (156-215)||(49772635-49772694)
chr3 (141-215)||(21574519-21574593)
chr3 (141-199)||(52412887-52412945)
chr3 (159-204)||(41452570-41452615)
chr3 (142-199)||(50004682-50004739)
chr3 (157-265)||(11253546-11253654)
chr3 (128-204)||(14548699-14548775)
chr3 (156-203)||(26808174-26808221)
chr3 (141-192)||(36200125-36200176)
chr3 (235-273)||(2100088-2100126)
chr3 (156-198)||(9279310-9279352)
chr3 (158-192)||(30750046-30750080)
chr3 (159-205)||(36646359-36646405)
chr3 (142-208)||(42745068-42745134)
chr3 (145-199)||(48048965-48049019)
chr3 (142-199)||(11039322-11039379)
chr3 (159-228)||(24603706-24603775)
chr3 (156-217)||(24624254-24624315)
chr3 (178-215)||(35197367-35197404)
chr3 (158-199)||(42537086-42537127)
chr3 (144-204)||(2606288-2606348)
chr3 (159-199)||(3015826-3015866)
chr3 (141-193)||(3044248-3044300)
chr3 (159-191)||(13804824-13804856)
chr3 (156-204)||(21865620-21865668)
chr3 (141-197)||(23785284-23785340)
chr3 (147-199)||(27290884-27290936)
chr3 (156-204)||(30573892-30573940)
chr3 (168-204)||(31403074-31403110)
chr3 (156-204)||(42817200-42817248)
chr3 (156-204)||(47132038-47132086)
[»] chr6 (46 HSPs)
chr6 (141-270)||(281760-281889)
chr6 (145-215)||(2767716-2767785)
chr6 (156-205)||(1669775-1669824)
chr6 (141-204)||(2460129-2460192)
chr6 (141-194)||(9667973-9668026)
chr6 (146-190)||(3155209-3155253)
chr6 (141-193)||(7785733-7785785)
chr6 (160-208)||(20377894-20377942)
chr6 (141-204)||(24670449-24670512)
chr6 (141-199)||(4420672-4420730)
chr6 (141-199)||(9027607-9027665)
chr6 (161-215)||(32917246-32917300)
chr6 (144-270)||(33498651-33498777)
chr6 (141-215)||(34403884-34403958)
chr6 (159-228)||(27595521-27595590)
chr6 (145-206)||(30523692-30523753)
chr6 (141-197)||(27909623-27909679)
chr6 (136-204)||(32577964-32578032)
chr6 (156-204)||(33832251-33832299)
chr6 (136-204)||(34939537-34939605)
chr6 (141-208)||(2455839-2455906)
chr6 (166-205)||(6310227-6310266)
chr6 (133-188)||(6536968-6537023)
chr6 (156-203)||(8364955-8365002)
chr6 (142-201)||(10836844-10836903)
chr6 (145-204)||(27615251-27615310)
chr6 (161-203)||(1575944-1575986)
chr6 (156-198)||(2034430-2034472)
chr6 (141-199)||(2117432-2117490)
chr6 (141-263)||(7148695-7148817)
chr6 (146-195)||(1019597-1019646)
chr6 (156-205)||(10616518-10616567)
chr6 (159-204)||(27693417-27693462)
chr6 (156-185)||(31668681-31668710)
chr6 (159-195)||(2460930-2460966)
chr6 (159-195)||(4246457-4246493)
chr6 (156-228)||(7901785-7901856)
chr6 (141-205)||(7945861-7945925)
chr6 (158-194)||(28776621-28776657)
chr6 (158-194)||(28798325-28798361)
chr6 (159-203)||(31624137-31624181)
chr6 (156-204)||(31686341-31686389)
chr6 (159-199)||(33284290-33284330)
chr6 (141-205)||(34404118-34404182)
chr6 (157-205)||(34404702-34404750)
chr6 (145-205)||(34939777-34939837)
[»] chr5 (40 HSPs)
chr5 (156-215)||(7674692-7674751)
chr5 (142-199)||(18700415-18700471)
chr5 (142-208)||(35963271-35963337)
chr5 (158-198)||(11700362-11700402)
chr5 (141-204)||(10125696-10125759)
chr5 (147-205)||(32172688-32172746)
chr5 (126-204)||(37690614-37690692)
chr5 (166-208)||(40499700-40499742)
chr5 (146-215)||(985647-985716)
chr5 (162-199)||(11457148-11457185)
chr5 (142-191)||(12467163-12467212)
chr5 (144-193)||(18704025-18704074)
chr5 (166-263)||(38047798-38047895)
chr5 (156-215)||(2468475-2468535)
chr5 (128-204)||(37526177-37526253)
chr5 (128-204)||(37588338-37588414)
chr5 (156-199)||(10272414-10272457)
chr5 (143-266)||(11297112-11297235)
chr5 (142-201)||(15074730-15074789)
chr5 (145-204)||(17368709-17368768)
chr5 (141-204)||(37611193-37611256)
chr5 (141-204)||(37787923-37787986)
chr5 (160-203)||(38766524-38766567)
chr5 (234-269)||(42646792-42646827)
chr5 (128-186)||(3504760-3504818)
chr5 (142-204)||(5951946-5952008)
chr5 (160-205)||(7853688-7853734)
chr5 (142-208)||(18853041-18853107)
chr5 (159-193)||(25705648-25705682)
chr5 (159-205)||(34117524-34117570)
chr5 (136-205)||(17258860-17258929)
chr5 (141-194)||(17369427-17369480)
chr5 (161-202)||(37489062-37489103)
chr5 (145-205)||(499708-499768)
chr5 (144-204)||(2092392-2092452)
chr5 (145-205)||(2092522-2092582)
chr5 (141-205)||(6109512-6109576)
chr5 (150-186)||(9104173-9104209)
chr5 (156-204)||(14295550-14295598)
chr5 (141-205)||(28586743-28586807)
[»] chr4 (30 HSPs)
chr4 (156-205)||(50800007-50800056)
chr4 (156-203)||(6978941-6978988)
chr4 (159-270)||(7367966-7368077)
chr4 (141-204)||(27123330-27123393)
chr4 (141-198)||(27970087-27970144)
chr4 (141-213)||(1137741-1137813)
chr4 (143-203)||(2874603-2874663)
chr4 (145-213)||(3176073-3176141)
chr4 (141-215)||(6987708-6987782)
chr4 (156-213)||(25571304-25571361)
chr4 (161-270)||(53315375-53315484)
chr4 (163-202)||(4243617-4243656)
chr4 (141-215)||(11264330-11264404)
chr4 (147-205)||(19304961-19305019)
chr4 (145-199)||(29467607-29467661)
chr4 (156-198)||(32071912-32071954)
chr4 (142-204)||(45128288-45128350)
chr4 (159-204)||(2996620-2996665)
chr4 (156-201)||(4691892-4691937)
chr4 (141-270)||(6428047-6428176)
chr4 (142-199)||(23676727-23676783)
chr4 (161-205)||(9841114-9841158)
chr4 (141-185)||(14011263-14011307)
chr4 (145-201)||(20936210-20936266)
chr4 (145-205)||(21592983-21593043)
chr4 (161-205)||(21952997-21953041)
chr4 (141-205)||(22662224-22662288)
chr4 (156-201)||(24370932-24370979)
chr4 (159-195)||(27124131-27124167)
chr4 (156-204)||(53155304-53155352)
[»] chr8 (41 HSPs)
chr8 (141-228)||(26410308-26410396)
chr8 (141-192)||(11183574-11183625)
chr8 (156-215)||(14949910-14949969)
chr8 (127-205)||(6950337-6950415)
chr8 (188-260)||(10939451-10939523)
chr8 (132-204)||(26479805-26479877)
chr8 (144-214)||(43504783-43504853)
chr8 (156-205)||(11813082-11813131)
chr8 (142-198)||(13000408-13000464)
chr8 (145-197)||(25869251-25869303)
chr8 (144-204)||(30259146-30259206)
chr8 (161-205)||(39551186-39551230)
chr8 (159-199)||(43709309-43709349)
chr8 (156-231)||(3090190-3090264)
chr8 (156-215)||(11569424-11569483)
chr8 (145-228)||(30191095-30191178)
chr8 (161-204)||(30987969-30988012)
chr8 (166-205)||(45071428-45071467)
chr8 (141-203)||(4560531-4560593)
chr8 (141-199)||(31875578-31875636)
chr8 (159-268)||(40356972-40357084)
chr8 (144-186)||(42597470-42597512)
chr8 (141-198)||(4055600-4055657)
chr8 (159-204)||(8255439-8255484)
chr8 (156-205)||(10062118-10062167)
chr8 (141-202)||(10383914-10383975)
chr8 (158-215)||(11188122-11188179)
chr8 (141-186)||(11795121-11795166)
chr8 (156-201)||(27119910-27119955)
chr8 (313-366)||(34293163-34293215)
chr8 (141-205)||(2458543-2458607)
chr8 (141-205)||(5088881-5088945)
chr8 (157-205)||(11118974-11119022)
chr8 (159-203)||(11770990-11771034)
chr8 (128-204)||(12361208-12361284)
chr8 (144-204)||(26370997-26371057)
chr8 (156-215)||(32840952-32841012)
chr8 (144-215)||(34849135-34849207)
chr8 (146-198)||(37740411-37740462)
chr8 (159-199)||(39049319-39049359)
chr8 (141-205)||(42215283-42215347)
[»] scaffold0020 (1 HSPs)
scaffold0020 (141-264)||(159891-160014)
[»] chr2 (40 HSPs)
chr2 (141-215)||(8820259-8820333)
chr2 (141-199)||(34652019-34652077)
chr2 (141-267)||(43529773-43529899)
chr2 (156-205)||(14316122-14316171)
chr2 (128-265)||(28677576-28677713)
chr2 (156-204)||(787376-787424)
chr2 (141-208)||(1647265-1647332)
chr2 (166-261)||(28803451-28803546)
chr2 (128-215)||(40158734-40158821)
chr2 (156-203)||(44606089-44606136)
chr2 (141-191)||(1939323-1939373)
chr2 (151-205)||(17380607-17380661)
chr2 (141-198)||(32821838-32821895)
chr2 (133-205)||(38388707-38388780)
chr2 (177-269)||(9996803-9996895)
chr2 (159-199)||(11344753-11344793)
chr2 (157-221)||(37186277-37186341)
chr2 (141-213)||(41817197-41817269)
chr2 (141-193)||(43985238-43985290)
chr2 (142-205)||(1830075-1830138)
chr2 (160-199)||(9878665-9878704)
chr2 (144-199)||(10285892-10285947)
chr2 (156-199)||(30538156-30538199)
chr2 (145-204)||(41032933-41032992)
chr2 (141-204)||(43065428-43065491)
chr2 (142-192)||(14451040-14451090)
chr2 (145-203)||(27237872-27237930)
chr2 (158-204)||(45314914-45314960)
chr2 (161-214)||(4550796-4550849)
chr2 (166-199)||(6561391-6561424)
chr2 (156-205)||(15120227-15120276)
chr2 (159-204)||(16398449-16398494)
chr2 (159-204)||(32106777-32106822)
chr2 (141-190)||(33942179-33942228)
chr2 (142-195)||(41809232-41809285)
chr2 (142-198)||(1160655-1160711)
chr2 (145-205)||(1742009-1742069)
chr2 (156-196)||(10285399-10285439)
chr2 (159-199)||(12215854-12215894)
chr2 (141-204)||(33231930-33231991)
[»] scaffold0147 (1 HSPs)
scaffold0147 (156-204)||(12682-12730)
[»] scaffold0153 (2 HSPs)
scaffold0153 (141-198)||(6478-6535)
scaffold0153 (141-198)||(13498-13555)
[»] scaffold0024 (1 HSPs)
scaffold0024 (156-221)||(27620-27685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (156-199)||(306370-306413)
[»] scaffold0311 (1 HSPs)
scaffold0311 (145-199)||(10600-10654)
[»] scaffold0015 (1 HSPs)
scaffold0015 (159-201)||(68960-69002)
[»] scaffold0608 (1 HSPs)
scaffold0608 (156-204)||(9615-9663)


Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 28521193 - 28520826
Alignment:
Q  1 atatcactgctgatggtgaccttggttgaacaagaaattcagtttaattaagcgcttagtgcatgcatgtatatcatacaagtgcttatgtataagttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521193 atatcactgctgatggtgaccttggttgaacaagaaattcagtttaattaagcgcttagtgcatgcatgtatatcatacaagtgcttatgtataagttaa 28521094  T
Q  101 ctgtttttatataagcctgtattcgtaaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521093 ctgtttttatataagcctgttttcgtaaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagt 28520994  T
Q  201 tctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaaacagaccctaggtaactattaatctcagtagacattaaga 300  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28520993 tctcctaagcagtcttagaagggcttatacttgtagaaaagctcaagtaattcaatccaaacagaccctaggtaactattaatctcagtagacattaaga 28520894  T
Q  301 gaacaaacaaga-catgtttttgtaccttgtagatttgatataattggtaataatttcacctatgcta 367  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28520893 gaacaaacaagagcatgtttttgtaccttgtagatttgatataattggtaatagtttcacctatgcta 28520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 12234930 - 12234801
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| | | | ||||||||| | | | ||| || |   |||||||    
T  12234930 gagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagctattccaagcagtctcacacgtgctaatgccagtagataa 12234831  T
Q  241 gctcaagtaattcaatccaaacagacccta 270  Q
    |||||| ||| |||||||||| || |||||    
T  12234830 gctcaactaagtcaatccaaataggcccta 12234801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 33646002 - 33645939
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  | || |||||| |||||||||||||||||||||||||||||||| ||||    
T  33646002 gagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctc 33645939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 48157158 - 48157087
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||  ||||||||||||||||| |||||| ||||||||||||| ||||| ||||| || ||||||    
T  48157158 cttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagtct 48157087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 29290380 - 29290420
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  29290380 tgaaaacagcttatggacatgtcataagttgtttccataag 29290420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 39551588 - 39551532
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||  |||||| |||| ||||| |||||||||||||||||||||||||    
T  39551588 agcttatggaaataagctgacaacaccttatggacatgtcataagttgtttccataa 39551532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 4966180 - 4966259
Alignment:
Q  136 ctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||| |||||||||||||  | ||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||||    
T  4966180 ctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctcctaaacagtct 4966259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 45078325 - 45078372
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcct 206  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  45078325 tgaaaacagcttatggacatgtcataagttatttctataagttctcct 45078372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 12834988 - 12834914
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatac 230  Q
    |||||||||||| |||| ||||||||||||| |||||||||||  ||| | || |||||| ||||| ||||||||    
T  12834988 agctgaaaacagtttatggacatgtcataagctgtttccataatctctaccaatcagtctcagaagtgcttatac 12834914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 39539807 - 39539769
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  39539807 agctgaaaacagcttatggacatgtcataagttgtttcc 39539769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 44615127 - 44615025
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatcc 258  Q
    |||||||||||| | ||||||||||||||||||| |||||| |||||| | |||| ||  ||| | |||| ||  ||||||||||||| |||  ||||||    
T  44615127 tgaaaacagcttgtggacatgtcataagttgttttcataagctctcctgaacagttttgcaagtggttatgctagtagataagctcaattaaggcaatcc 44615028  T
Q  259 aaa 261  Q
    |||    
T  44615027 aaa 44615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 36537947 - 36538000
Alignment:
Q  151 aaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| |||| |||||| |||||  ||||||||||||||||||||||||||||||    
T  36537947 aaaaaagctaaaaacaacttatgaacatgtcataagttgtttccataagttctc 36538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 941589 - 941629
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  941589 aaaactgcttatggacatgtcataagttgtttccataagtt 941629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 19719050 - 19719098
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  19719050 agctgaaaacagtttatgaacatgtcataagttgttttcataagttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 36598382 - 36598334
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||||||  |||||||||||| |||||||||||| ||||    
T  36598382 agctgaaaacagcttatgaacatgtcataagatgtttccataagctctc 36598334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 44686977 - 44687017
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  44686977 tgaaaacagctcatggacatgtcataagttgtttccataag 44687017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 46082056 - 46082128
Alignment:
Q  132 tattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||  ||||||||| |||  ||||||||||| ||||| | ||||||||||||||||| |||||| ||||    
T  46082056 tattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctctc 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 11048071 - 11048118
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||||    
T  11048071 agctgaaaacagcttatgaacatgtcataagttgttttgataagttct 11048118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 20553132 - 20553219
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||||||||||  | ||||||||| |||||  ||||||| |||| |||||||||||| |||||| | |||||| | ||| ||||||    
T  20553132 gagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagctctcctgaacagtctcacaagtgcttat 20553219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 23214899 - 23215006
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaa 255  Q
    ||||||| | ||||||| || |||||||||||||||| ||||| |||||  || |||||| | ||| | |||| ||  |||||||| |||| ||| ||||    
T  23214899 agctgaatagagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaa 23214998  T
Q  256 tccaaaca 263  Q
    ||||||||    
T  23214999 tccaaaca 23215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 23434184 - 23434137
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| ||||    
T  23434184 gctgaaaacagcttaaagacatgtcataagttgtgtccaaaagctctc 23434137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 39334208 - 39334279
Alignment:
Q  127 aaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||| ||| ||| ||||||||||||||  |||||||  || ||||| |||||||||||| ||||||||||||    
T  39334208 aaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataa 39334279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 39360038 - 39360109
Alignment:
Q  127 aaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||| ||| ||| ||||||||| ||||  |||||||| || ||||| || ||||||||||||||||||||||    
T  39360038 aaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccataa 39360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 1645723 - 1645681
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    |||||||| |||||| |||||||||||||||||| ||||||||    
T  1645723 tgaaaacaacttataaacatgtcataagttgtttacataagtt 1645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 3501003 - 3500945
Alignment:
Q  146 tatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||  |||||||||||||| ||  |||||||||||||| |||||||||| ||||    
T  3501003 tatggaaataagctgaaaacagctgatgtacatgtcataagttatttccataagctctc 3500945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 5006532 - 5006494
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  5006532 aaaacaacttatagacatgttataagttgtttccataag 5006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 15740432 - 15740390
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||||  |||||||||||||||||| ||||||||||    
T  15740432 aaaacagcttatgaacatgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 22387937 - 22387863
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  || | ||||||| ||||| ||||| |||||||||||| |||||| ||||| || ||||||    
T  22387937 gagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtct 22387863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 27626164 - 27626106
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||  || | ||||||| |||| ||||||||||||| ||||||||||||    
T  27626164 gagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataag 27626106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 29574638 - 29574592
Alignment:
Q  169 ttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||| ||||||||||||| |||||||||||||||||| || ||||||    
T  29574638 ttatggacatgtcataagctgtttccataagttctccgaaacagtct 29574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 39568374 - 39568308
Alignment:
Q  132 tattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||| ||||||  ||||  ||| ||||||| ||||| ||||||||||||||| |||||||||    
T  39568374 tattctgacaagcttacagaaataagccgaaaacaacttatggacatgtcataagttatttccataa 39568308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 47427319 - 47427281
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  47427319 agcttatagagatgtcataagttgtttccataagctctc 47427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 752998 - 753103
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    |||| |||| ||| ||||| |||||||||||| || |||||||||  ||||| ||||||||||   || |||||||||| | |||||| |   |||||||    
T  752998 gagcatatgaaaattagctaaaaacagcttattgatatgtcataaactgttttcataagttctttcaatcagtcttagaggtgcttatgcaagtagataa 753097  T
Q  241 gctcaa 246  Q
    ||||||    
T  753098 gctcaa 753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 9872916 - 9872957
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccata 197  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  9872916 agctggaaacaacttatggacatgtcataagttgtttccata 9872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 30535609 - 30535666
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||||||   |||| ||||||||||||| |||||||||||| || ||||||    
T  30535609 ctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtct 30535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 39345486 - 39345555
Alignment:
Q  127 aaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccat 196  Q
    |||| ||| ||||||| ||||||||||  |||||||| || ||||| ||||||||||||  |||||||||    
T  39345486 aaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccat 39345555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27496444 - 27496385
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  ||||||||||||||||| |||||||||| || ||||||| |||| |||||    
T  27496444 ttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctcc 27496385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27503102 - 27503043
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  ||||||||||||||||| |||||||||| || ||||||| |||| |||||    
T  27503102 ttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctcc 27503043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27517893 - 27517834
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  |||||||||| |||||| ||||||||||||||| ||||| |||| |||||    
T  27517893 ttatggaaataagctgaaaactgcttatggacatgtcataagtt-tttccttaagctctcc 27517834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 30134100 - 30134136
Alignment:
Q  163 aacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  30134100 aacagattatagacatgtcataagctgtttccataag 30134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 44808189 - 44808245
Alignment:
Q  143 gcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||| |||  |||||||||||| |||| ||||||||||||||| ||| ||||||    
T  44808189 gcttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataag 44808245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 4549260 - 4549335
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtctta 217  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  4549260 agcttatggaaataagctgaaaacaacttatagacatgtcataaattgtttccaaaagttctcttaagcagtctta 4549335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 15581299 - 15581338
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccat 196  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15581299 gctgaaaacagcttatagacatgtcataagttgtttccat 15581338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 17628644 - 17628686
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  17628644 gctgaaaacagcttatggacatgtcataagttgtttccataag 17628686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 33723422 - 33723300
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataag 241  Q
    ||||||||||||  ||||||||||| || ||  ||||||||| || |||||||||||||| ||| ||||||||| | ||| | ||||  |  ||||||||    
T  33723422 agcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataag 33723323  T
Q  242 ctcaagtaattcaatccaaacag 264  Q
     |||| ||| |||||||||||||    
T  33723322 ttcaaataagtcaatccaaacag 33723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 44032053 - 44031953
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggctta 227  Q
    |||||||  ||| ||||||||||||| |||||||||| ||||||| |||||||||| || || || |||||| |||||||  |||||| | ||| |||||    
T  44032053 aagttatcttgaagagcttatggaaattagctgaaaatagcttatggacatgtcattagctgcttacataagctctcctagacagtctaacaagtgctta 44031954  T
Q  228 t 228  Q
    |    
T  44031953 t 44031953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 601085 - 601191
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaa 255  Q
    ||||||||| |||||| | |||||||||||||||||| | ||  |||||| || |||||| | ||| ||||||  | | |||||||||||||||| ||||    
T  601085 agctgaaaatagcttaca-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaa 601183  T
Q  256 tccaaaca 263  Q
    ||||||||    
T  601184 tccaaaca 601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 15579515 - 15579586
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtctt 216  Q
    |||||||||  |||||| |||| ||||| |||||||||||||||||||||| ||| ||||| || |||||||    
T  15579515 ttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaacagtctt 15579586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 31517781 - 31517694
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    ||||||||| |||  |||||||||||||||||  ||||||||| ||||||||  ||||||||||| || |||||| | ||| ||||||    
T  31517781 gagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttat 31517694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 35350683 - 35350722
Alignment:
Q  155 tagctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35350683 tagctgaaaacagcttatggacatgtcataagttgtttcc 35350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 28689492 - 28689430
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||| |||  ||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  28689492 agcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctc 28689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 4549583 - 4549462
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagctt-atagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagata 239  Q
    |||||||| |||| | | |||||||| ||| ||||||||||||||||||||||| ||||| ||||| || |||||| ||||  |||||| |   ||||||    
T  4549583 gagcttattgaaatttgttgaaaacaactttatagacatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagata 4549484  T
Q  240 agctcaagtaattcaatccaaa 261  Q
    | ||||| |||  |||||||||    
T  4549483 atctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 15709898 - 15709987
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaa 250  Q
    ||||||||||||  |||||||||||| | ||||| |||||||||| || |||||| | ||| |||||| ||  ||||||| |||||||||    
T  15709898 aaaacagcttatctacatgtcataagctatttccgtaagttctcccaaacagtctcaaaagtgcttatgctagtagataacctcaagtaa 15709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 26184777 - 26184830
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||| |||||||    
T  26184777 gagcttatggaaataatctgaaaacagcttatggacatgtcataagctgtttcc 26184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 11639470 - 11639390
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||||||   ||||||||| |||  |||| |||||||||||| ||||||||||||| ||||| |||||| ||| ||||    
T  11639470 aagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctcttctaa 11639390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 19412637 - 19412581
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||  |||  ||| |||||||| |||||||||||||||||||||||||    
T  19412637 agcttatggaaataagccaaaatcagcttatggacatgtcataagttgtttccataa 19412581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 37593734 - 37593598
Alignment:
Q  132 tattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatact 231  Q
    |||| ||| ||||||||| |||  |||||||||||||||||  |||||||||||||||| | ||| |||| ||| || |||||| | ||| | |||| |     
T  37593734 tattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtctaacaagtgtttatgcc 37593635  T
Q  232 tttagataagctcaagtaattcaatccaaacagaccc 268  Q
      || |||||||||| ||| ||||  |||||||||||    
T  37593634 agtatataagctcaaataagtcaaatcaaacagaccc 37593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 4699656 - 4699597
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagt 200  Q
    |||||||| ||||  |||| ||||||||||||  |||||||||||||||||| |||||||    
T  4699656 gagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataagt 4699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 28389131 - 28389060
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||  || ||| ||||  ||||| |||| |||||||||||||||  |||||||||||||||||||    
T  28389131 cttatggaaataagttgacaacattttataaacatatcataagttgtttccggaagttctcctaagcagtct 28389060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 38170716 - 38170657
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||| |||||  |||||||||||| ||||| |||||| ||||| |||||||||    
T  38170716 agctgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtct 38170657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 43029442 - 43029379
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||  ||||||||| ||||||||||||||| ||||  ||||| |||||| |||||    
T  43029442 agcttatggaaataagctgaaaatagcttatagacatgtaataaactgttttcataagctctcc 43029379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 44928214 - 44928127
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaa 246  Q
    |||||||| ||||  | |||||||||||||||||| ||||||||| | || || ||||| ||| |||||||||  || ||||||||||    
T  44928214 tgaaaacaacttacgggcatgtcataagttgtttctataagttcttccaaacaatcttacaagtgcttatactagtaaataagctcaa 44928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 45327624 - 45327667
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||  |||| ||||||||||||||||||||||||||    
T  45327624 agctgaaaacaatttatggacatgtcataagttgtttccataag 45327667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 17631118 - 17631080
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  17631118 agcttatggacatgtcataagttgtttccataagctctc 17631080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 30418218 - 30418165
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||| ||||||||  | ||||| ||||||||||||||||||||||||||    
T  30418218 ttatggaaaaaagctgaaataa-cttatggacatgtcataagttgtttccataag 30418165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 36514714 - 36514652
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagaca-tgtcataagttgtttccataagttctcc 205  Q
    |||||| |||| ||||||||||||||| || ||| ||||||||||| ||| ||||||||||||    
T  36514714 cttatgaaaaaaagctgaaaacagcttctaaacaatgtcataagttattttcataagttctcc 36514652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 3223711 - 3223748
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttc 193  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  3223711 agctgaaaacaacttataaacatgtcataagttgtttc 3223748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 27140507 - 27140560
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    ||||||||| |||  ||||||||||| ||||| ||||||||||||| |||||||    
T  27140507 gagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttcc 27140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 32515464 - 32515395
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||||| ||||| ||||||||||| | |||||||||||| ||||| || |||||| | ||| ||||||    
T  32515464 tgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttat 32515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 35925723 - 35925780
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttc 202  Q
    |||||||||  || ||||||||||||||  |||||||||||| ||||| |||||||||    
T  35925723 ttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 37175940 - 37175891
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||| | ||||||||||||||||||||||| ||| |||| ||||||    
T  37175940 agcttataaatatgtcataagttgtttccataagctcttctaaacagtct 37175891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 3070116 - 3070080
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgttt 192  Q
    |||||||||||||||||  ||||||||||||||||||    
T  3070116 agctgaaaacagcttatgaacatgtcataagttgttt 3070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 4481974 - 4482022
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| ||||||||||||  |||||| ||||||||||| |||||||||||    
T  4481974 agctaaaaacagcttatgaacatgtaataagttgttttcataagttctc 4482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 6231842 - 6231802
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccat 196  Q
    |||||||||||| |||| |||||||||| ||||||||||||    
T  6231842 agctgaaaacagtttatggacatgtcattagttgtttccat 6231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 24279808 - 24279852
Alignment:
Q  171 atagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||||||||||||||||||| |||| || || ||||||    
T  24279808 atagacatgtcataagttgtttccataggttcccccaatcagtct 24279852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 29635391 - 29635439
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||| |||||    
T  29635391 agctgaaaacaacttataaacatgtcataacttgttttcataaattctc 29635439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 29723536 - 29723580
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  29723536 tgaaaacagtttatggacatgtcataagctgtttccattagttct 29723580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 43338145 - 43338212
Alignment:
Q  141 gagcttatggaaaatag-ctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||||| ||||||| ||||||| || ||||  |||||||||||| |||||||||||||||| ||||    
T  43338145 gagcttatg-aaaataggctgaaaatagattatgaacatgtcataagctgtttccataagttcttctaa 43338212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 45541617 - 45541723
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatc 257  Q
    |||||||||||||||  |||||||||||| ||||| |||||||||| |||| |||||||| ||| | ||||||  ||| |||||||||| ||| ||||||    
T  45541617 ctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatc 45541716  T
Q  258 caaacag 264  Q
    |||||||    
T  45541717 caaacag 45541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 37273166 - 37273237
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||  || |||||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||    
T  37273166 cttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtct 37273237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 31010431 - 31010489
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||||   ||||||||||||||||| |||||||||||||||||||| |||||    
T  31010431 gagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataag 31010489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 30923924 - 30923883
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccata 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  30923924 agctgaaaacagcttatagacatgtcataagctgtttccata 30923883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 41724256 - 41724301
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  41724256 agctgaaaacaacttatggacatgtcataagttgtttccataagtt 41724301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 43115085 - 43115142
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||||||||||||  |||||||||||  |||| |||||||||||||||||||||||||    
T  43115085 gagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataa 43115142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 20192647 - 20192584
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  || |||||||||||||| ||||||||||||| |||||| ||||| ||||    
T  20192647 gagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctc 20192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 49772694 - 49772635
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  49772694 agctaaaaaaagcttatggacatctcataagttgtttccataagctctcctaaacagtct 49772635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 21574519 - 21574593
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  |||| ||| ||||||||  |||||||||||||||||| |||||| ||||| || ||||||    
T  21574519 gagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtct 21574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 52412945 - 52412887
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||| ||||||||  |||||||||||||||||| |||||||||| |||||||| |||||    
T  52412945 gagcatatggaaataagctgaaaacagcttataaacatgtcataggttgtttctataag 52412887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 41452570 - 41452615
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||    
T  41452570 tgaaaacagcttatagacatatcataagttgtttctataaggtctc 41452615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 50004682 - 50004739
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||| ||||  ||||||||||||||||   |||||||||||||||||||||||||    
T  50004682 agcttattgaaataagctgaaaacagcttaagaacatgtcataagttgtttccataag 50004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 11253546 - 11253654
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaat 256  Q
    ||||||||||| ||||||| ||||||||||||||||  |||| |||| | || ||||||   ||| |||||| ||  ||||||| ||||| ||| |||||    
T  11253546 gctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctctcaagtgcttatgctagtagataatctcaaataagtcaat 11253645  T
Q  257 ccaaacaga 265  Q
     ||||||||    
T  11253646 tcaaacaga 11253654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 14548775 - 14548699
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||  |||||||||||||  ||||||||||||| |||  | |||||||| ||||||| |||||| ||||    
T  14548775 aagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctc 14548699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 26808221 - 26808174
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||| ||||||| ||||| |||||||||||||||||||| ||||||||    
T  26808221 agctcaaaacagtttataaacatgtcataagttgtttccgtaagttct 26808174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 36200125 - 36200176
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgttt 192  Q
    ||||| |||||||  ||||||||||| ||||| |||||||||||||||||||    
T  36200125 gagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 2100126 - 2100088
Alignment:
Q  235 agataagctcaagtaattcaatccaaacagaccctaggt 273  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  2100126 agataagctcaaataagtcaatccaaacagaccctaggt 2100088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 9279352 - 9279310
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||||||||||||||||| |||||| ||||| |||||||||||    
T  9279352 agctgaaaacagcttatatacatgttataagctgtttccataa 9279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 30750046 - 30750080
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgttt 192  Q
    ||||||||||||||| |||||||||||||||||||    
T  30750046 ctgaaaacagcttatggacatgtcataagttgttt 30750080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 36646405 - 36646359
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||| |||||| ||||||| ||||||||||| |||||    
T  36646405 tgaaaacagcttatggacatgccataagtggtttccataagctctcc 36646359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 42745068 - 42745134
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||||||||  || |||||||| |||||  |||||||||||||||||| ||||| |||| ||||    
T  42745068 agcttatggaaataagatgaaaacaacttatgaacatgtcataagttgtttacataaattcttctaa 42745134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 48049019 - 48048965
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||| || ||||||    
T  48049019 ttatggaaataagctgaaaacagcttatggacatgtcatgagttggtttcataag 48048965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 11039379 - 11039322
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||| |  ||||||||||| ||||| ||||||||||||  ||||||||||||    
T  11039379 agcttatggagataagctgaaaacaacttatggacatgtcataatatgtttccataag 11039322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 24603775 - 24603706
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||||||||||| | ||||||||||  |||||| ||||||||||| || |||||| ||| | ||||||    
T  24603775 tgaaaacagcttatgggcatgtcataaactgtttcaataagttctcccaaacagtctcagaggtgcttat 24603706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 24624254 - 24624315
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtctta 217  Q
    |||||||||||| |||| ||||||||||||| ||||| |||||| ||| | || ||||||||    
T  24624254 agctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtctta 24624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 35197367 - 35197404
Alignment:
Q  178 tgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||||||||||||||||| || ||||||    
T  35197367 tgtcataagttgtttccataagttctcccaatcagtct 35197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 42537086 - 42537127
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||||| | ||||||| ||||||||||||||||||    
T  42537086 ctgaaaacagcttgtggacatgtaataagttgtttccataag 42537127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 2606348 - 2606288
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||  |||||||||| | || | | ||||||||||||||||||||||||| ||||    
T  2606348 cttatggaagttagctgaaaagaactgacacacatgtcataagttgtttccataagatctc 2606288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 3015866 - 3015826
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||| ||||| ||||||||||||||||||| ||||||    
T  3015866 tgaaaacatcttatggacatgtcataagttgttttcataag 3015826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 3044300 - 3044248
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttc 193  Q
    ||||||||| |||  || ||||||||||||||  |||||||||||||||||||    
T  3044300 gagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 13804824 - 13804856
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtt 191  Q
    |||||||||||||| ||||||||||||||||||    
T  13804824 tgaaaacagcttatggacatgtcataagttgtt 13804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 21865620 - 21865668
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| ||| ||  |||||||||||||||||||| ||||||||||    
T  21865620 agctgaaaatagcgtacggacatgtcataagttgtttctataagttctc 21865668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 23785284 - 23785340
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccata 197  Q
    |||||||||||||  ||||||||||| ||||| |||| | |||||| ||||||||||    
T  23785284 gagcttatggaaacaagctgaaaacaacttatggacacgccataagctgtttccata 23785340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 27290936 - 27290884
Alignment:
Q  147 atggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||  ||||||||||||||||| | ||||||||||| ||||| ||||||    
T  27290936 atggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataag 27290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 30573940 - 30573892
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||||||  ||||| ||||| |||||| |||||||||||    
T  30573940 agctgaaaacagcttatgaacatgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 31403074 - 31403110
Alignment:
Q  168 cttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  31403074 cttatagacatgtaataagttgtttccataagctctc 31403110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 42817248 - 42817200
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||| ||||| ||||||||||| | |||||||||||| ||||    
T  42817248 agctgaaaacaacttatggacatgtcatatgctgtttccataagctctc 42817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 47132038 - 47132086
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||| |||| || ||| |||||||||||| |||||||||||    
T  47132038 agctgaaaacagtttatggatatgacataagttgttttcataagttctc 47132086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 281889 - 281760
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||||| |||||| || ||||| || |||||| | |||  |||||     || ||||    
T  281889 gagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctctcccaaacagtctcacaagtacttatgtcactacataa 281790  T
Q  241 gctcaagtaattcaatccaaacagacccta 270  Q
     ||||||||| |||||||||||||||||||    
T  281789 tctcaagtaagtcaatccaaacagacccta 281760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 2767785 - 2767716
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||| ||||| ||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||    
T  2767785 ttatggaaaa-agctggaaacagcttatggacatgtcataagctgtttccacaagctctcctaagcagtct 2767716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 1669824 - 1669775
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1669824 agctgaaaacagcttatagacatgtcataagttgttttcataagctctcc 1669775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 2460192 - 2460129
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  || |||||||| |||| ||||||||||||||||||||||||||| ||||    
T  2460192 gagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctc 2460129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 9668026 - 9667973
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||||||||  || |||||||||||||| |||||||||||||||||||||    
T  9668026 gagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttcc 9667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 3155209 - 3155253
Alignment:
Q  146 tatggaaaatagctgaaaacagcttatagacatgtcataagttgt 190  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  3155209 tatggaaataagctgaaaacagcttatagacatgtcataagttgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 7785785 - 7785733
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttc 193  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||| ||||||    
T  7785785 gagcttatggaaataagctgaaaacaacttatagacatgtcataagctgtttc 7785733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 20377942 - 20377894
Alignment:
Q  160 gaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  20377942 gaaaacaacttatagacatgtcataagttgttttcataagctctcctaa 20377894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 24670449 - 24670512
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| |||  |||||| |||||| ||| |||||||||||||||||||| ||||||||||    
T  24670449 gagcttatgaaaataagctgataacagcatattgacatgtcataagttgtttctataagttctc 24670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 4420672 - 4420730
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||  |||||||||||||||||  ||||||||||| ||||||| |||||    
T  4420672 gagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataag 4420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 9027607 - 9027665
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||| |||  ||||||||||| ||||| ||||||||||||||| ||||||||||    
T  9027607 gagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataag 9027665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 32917246 - 32917300
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| || ||||||    
T  32917246 aaaaaagcttatggacatgtcataagttgtttccataagctctcccaaacagtct 32917300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 33498651 - 33498777
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagct 243  Q
    ||||||||||  ||||||||| | | ||||||||||||||||||||||| |||||| ||| | ||  ||||| ||||| | || |||   | ||||| ||    
T  33498651 cttatggaaataagctgaaaataacctatagacatgtcataagttgttttcataagctctaccaaaaagtctcagaagtgtttttaccggttgataacct 33498750  T
Q  244 caagtaattcaatccaaacagacccta 270  Q
    ||| ||| |||||| ||||||||||||    
T  33498751 caaataagtcaatctaaacagacccta 33498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 34403884 - 34403958
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  || |||||||| |||||  |||||||||||||||||| | ||| ||||||||| ||||||    
T  34403884 gagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtct 34403958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 27595590 - 27595521
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||| || |||||| | ||| ||||||    
T  27595590 tgaaaatagcttatgaacatgtcataagttgtttccataaattctcccaaacagtctcataagtgcttat 27595521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 30523692 - 30523753
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcct 206  Q
    |||| |||| ||| ||||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  30523692 ttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatctcct 30523753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 27909679 - 27909623
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccata 197  Q
    |||||||||||||  ||||||||||| ||||| |||||||||||  |||||||||||    
T  27909679 gagcttatggaaataagctgaaaacaacttatggacatgtcatatattgtttccata 27909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 32578032 - 32577964
Alignment:
Q  136 ctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| |||| ||||||||  |||||||||||||| |  ||||||||||||||||||| |||||| ||||    
T  32578032 ctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctc 32577964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 33832299 - 33832251
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| |||||| |||||| |||||||||||||||||| |||||||||||    
T  33832299 agctaaaaacaacttataaacatgtcataagttgttttcataagttctc 33832251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 34939537 - 34939605
Alignment:
Q  136 ctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| ||| |||||||||  ||||||||||| ||||  ||| |||||||||||||||||||||| ||||    
T  34939537 ctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctc 34939605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 2455839 - 2455906
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    |||||||||||||  || |||||| || |||| | |||||||||||||||||||||||| ||| ||||    
T  2455839 gagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctcttctaa 2455906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 6310266 - 6310227
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  6310266 agcttatagacatgtcataagttgttttcataagctctcc 6310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 6536968 - 6537023
Alignment:
Q  133 attctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagtt 188  Q
    ||||||| |||||||||||||  ||||||||||| |||||  ||||||||||||||    
T  6536968 attctgaagagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 8365002 - 8364955
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||||||| || ||||||||| |||| ||||||||||||||    
T  8365002 agctgaaaacagcttgtaaacatgtcatcagttatttccataagttct 8364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 10836844 - 10836903
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||||||| || ||||| |||| |||| || ||||||||| ||||||||||||||||||    
T  10836844 agcttatgggaactagcttaaaatagctaatggacatgtcagaagttgtttccataagtt 10836903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 27615310 - 27615251
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| ||  |||||| |||||||  |||||||||||||||||||||||| |||||    
T  27615310 ttatggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataaattctc 27615251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 1575944 - 1575986
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||||  |||||||||||||||||| ||||||||||    
T  1575944 aaaacagcttatgaacatgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 2034472 - 2034430
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||||||| || |||||||||| |||||||||||    
T  2034472 agctgaaaacagcttatggaaatgtcataagctgtttccataa 2034430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 2117432 - 2117490
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||| ||||  |||| ||||||||||||||||||| ||||| ||||||| |||||    
T  2117432 gagcttattgaaataagctaaaaacagcttatagacatgccataaattgtttctataag 2117490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 7148695 - 7148817
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    ||||||||| |||  || |||||| ||||||| |||| |||||||||||||||| |||| ||| || | || ||| | ||| |||||| |   |||||||    
T  7148695 gagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagataa 7148794  T
Q  241 gctcaagtaattcaatccaaaca 263  Q
    |||||| ||| |||| |||||||    
T  7148795 gctcaaataagtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 1019646 - 1019597
Alignment:
Q  146 tatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcca 195  Q
    ||||||||  |||| |||||| ||||||||||||| ||||||||||||||    
T  1019646 tatggaaataagctaaaaacaacttatagacatgttataagttgtttcca 1019597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 10616567 - 10616518
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||| ||| ||||  |||||||||||||||||||||||||| |||||    
T  10616567 agctgaacacaacttacggacatgtcataagttgtttccataagctctcc 10616518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 27693462 - 27693417
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||    
T  27693462 tgaaaatagcttatgaacatgtcataagttgtttccataaattctc 27693417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 31668710 - 31668681
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataa 185  Q
    ||||||||||||||||||||||||||||||    
T  31668710 agctgaaaacagcttatagacatgtcataa 31668681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 2460966 - 2460930
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttcca 195  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  2460966 tgaaaatagcttatagacatgtaataagttgtttcca 2460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 4246457 - 4246493
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttcca 195  Q
    |||||||||||||| |||||||||| |||||||||||    
T  4246457 tgaaaacagcttatggacatgtcatgagttgtttcca 4246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 7901856 - 7901785
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||||||||| |||||||||| || |||||||||| |||||| ||| | || |||||| | ||||||||||    
T  7901856 agctgaaaacagtttatagacatatcttaagttgttt-cataagctcttccaaacagtctcacaagggcttat 7901785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 7945925 - 7945861
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||  |||| |||||| || ||| ||||| |||||||||||| ||||| ||||||    
T  7945925 gagcttatggaaataagcttaaaacaactaataaacatgccataagttgttttcataatttctcc 7945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 28776621 - 28776657
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||||||||||||||| |||||||| |||||||    
T  28776621 ctgaaaacagcttatagacaagtcataagctgtttcc 28776657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 28798325 - 28798361
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||||||||||||||| |||||||| |||||||    
T  28798325 ctgaaaacagcttatagacaagtcataagctgtttcc 28798361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 31624137 - 31624181
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||||||  |||||||||||| ||||| ||||||||||    
T  31624137 tgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31686389 - 31686341
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||| ||||| || |||||||||||||||  ||||||||||    
T  31686389 agctgaaaacagattataaacttgtcataagttgttttgataagttctc 31686341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 33284290 - 33284330
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  33284290 tgaaaacagcttatggaaatgtcataagttgtttccctaag 33284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 34404118 - 34404182
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||| ||||  || |||||||| |||||| |||||| ||| | ||||||||||||||||||    
T  34404118 gagcttatagaaataagttgaaaacaacttatatacatgtaatagggtgtttccataagttctcc 34404182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 34404750 - 34404702
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||  |||||||||||| | ||| ||||||||||||    
T  34404750 gctgaaaacagcttatgtacatgtcataagatattttcataagttctcc 34404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 34939777 - 34939837
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  |||||||||||  |||| ||||||||||||| ||||||| |||| |||||    
T  34939777 ttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctcc 34939837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 7674692 - 7674751
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||    
T  7674692 agctgaaaacaccttataaacatgtcataagttgtttccataagttcttccaagcagtct 7674751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 18700415 - 18700471
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  18700415 agcttatggataa-agctgaaaacaacttatagacatgtcataagttgtttccataag 18700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 35963271 - 35963337
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||||||||  ||||||||||| ||||| ||||||||||| | | |||||||||||||||||||    
T  35963271 agcttatggaaataagctgaaaacaacttatggacatgtcatacgctatttccataagttctcctaa 35963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 11700402 - 11700362
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  11700402 ctgaaaacagcttatggacatgtcataagttgtttccataa 11700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 10125759 - 10125696
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| |||  ||||||||||| |||||  |||||||||||||||||| |||||||||||    
T  10125759 gagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctc 10125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 32172688 - 32172746
Alignment:
Q  147 atggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||  |||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  32172688 atggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcc 32172746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 37690692 - 37690614
Alignment:
Q  126 taaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||| ||  |||||||||||||  |||||||||||||||||  |||||||||| ||||| | |||||| ||||    
T  37690692 taaagttattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctc 37690614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 40499742 - 40499700
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  40499742 agcttatggacatgtcataagttgtttccataagctctcctaa 40499700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 985647 - 985716
Alignment:
Q  146 tatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||  |||||||||| |||| | ||||||||||||||| ||| |||||  |||||||||||||||    
T  985647 tatggaaataagctgaaaaccgcttgtggacatgtcataagttatttgcataatctctcctaagcagtct 985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 11457148 - 11457185
Alignment:
Q  162 aaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11457148 aaacagcttatggacatgtcataagttgtttccataag 11457185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 12467163 - 12467212
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtt 191  Q
    |||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  12467163 agcttatgaaaataagctgaaaacagcttataaacatgtcataagttgtt 12467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 18704074 - 18704025
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttc 193  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||||||||||    
T  18704074 cttatggaaataagctgaaaacaacttatagacatgttataagttgtttc 18704025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 38047895 - 38047798
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaaaca 263  Q
    ||||||| |||||||||||||||||||||||||| ||||| || |||||  | |||  |||||| |  |||||||| ||||||||  ||||| |||||    
T  38047895 agcttatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttataatagtagataagttcaagtaagccaatctaaaca 38047798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 2468475 - 2468535
Alignment:
Q  156 agctgaaaacagcttatagacatgtcat-aagttgtttccataagttctcctaagcagtct 215  Q
    |||| |||||||||||| |||||||||| || ||||||||||||||||||| || ||||||    
T  2468475 agctcaaaacagcttatggacatgtcataaaattgtttccataagttctccaaaacagtct 2468535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 37526253 - 37526177
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||| |||||  |||||||||||||  |||||||||||||||||  |||||||||| ||||| | |||||| ||||    
T  37526253 aagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctc 37526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 37588414 - 37588338
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||  |||||||||||||  |||||||||||||||||  |||| ||||| ||||| | |||||| ||||    
T  37588414 aagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctctc 37588338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 10272457 - 10272414
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||    
T  10272457 agctgaaaacaacttacagacatgtcataagttgtttctataag 10272414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 11297235 - 11297112
Alignment:
Q  143 gcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagc 242  Q
    ||||||| |||  ||||||||| |||| || |||||||| ||||||||||||||||| |||   || |||||||| ||| | |||| |   |||||||||    
T  11297235 gcttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagc 11297136  T
Q  243 tcaagtaattcaatccaaacagac 266  Q
    | || ||| ||||| |||||||||    
T  11297135 ttaaataagtcaattcaaacagac 11297112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 15074789 - 15074730
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||||||||||  ||||||||||||||||| |||||||| || |||| ||| |||||||    
T  15074789 agcttatggaaataagctgaaaacagcttatggacatgtcgtacgttgcttcaataagtt 15074730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 17368709 - 17368768
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||  |||||||||| || |||  |||||||||||||||||| |||||||||||    
T  17368709 ttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 37611256 - 37611193
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  | |||||||||||||||  |||||||| ||||||||| |||||| ||||    
T  37611256 gagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctc 37611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 37787986 - 37787923
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  | |||||||||||||||  |||||||| ||||||||| |||||| ||||    
T  37787986 gagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctc 37787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 38766567 - 38766524
Alignment:
Q  160 gaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  38766567 gaaaacaacttatggacgtgtcataagttgtttccataagttct 38766524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 42646792 - 42646827
Alignment:
Q  234 tagataagctcaagtaattcaatccaaacagaccct 269  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42646792 tagataagctcaagtaagtcaatccaaacagaccct 42646827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 3504760 - 3504818
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataag 186  Q
    |||||||||||  ||||||||| |||  |||||||||||||||| | ||||||||||||    
T  3504760 aagttattctggagagcttatgtaaataagctgaaaacagcttacaaacatgtcataag 3504818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 5952008 - 5951946
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||  ||||||||||| ||||||| | | |||||||||| ||||||||| ||||    
T  5952008 agcttatggaaataagctgaaaacaacttatagccctatcataagttgcttccataagctctc 5951946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 7853688 - 7853734
Alignment:
Q  160 gaaaacagcttatagaca-tgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||    
T  7853688 gaaaacagcttatgaacaatgtcataagttgtttccataagttctcc 7853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 18853041 - 18853107
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    ||||||||||||  |||| ||||||||| |||| |||||| |||| ||||| ||||| |||||||||    
T  18853041 agcttatggaaataagctaaaaacagctaataggcatgtcgtaagctgttttcataacttctcctaa 18853107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 25705682 - 25705648
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttc 193  Q
    |||||||||||||||||||||||| ||||||||||    
T  25705682 tgaaaacagcttatagacatgtcacaagttgtttc 25705648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 34117570 - 34117524
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||| | ||||||||||||||| |||||||| |||||    
T  34117570 tgaaaacagcttatgggcatgtcataagttgtctccataagctctcc 34117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 17258929 - 17258860
Alignment:
Q  136 ctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||| ||||||||| |||  |||||||||||||||||  |||||||||||| | ||| |||| |||||||    
T  17258929 ctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcc 17258860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 17369480 - 17369427
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcc 194  Q
    |||||||| ||||  | ||||||||| ||||||||||||||||||| |||||||    
T  17369480 gagcttatagaaataatctgaaaacaacttatagacatgtcataagctgtttcc 17369427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 37489103 - 37489062
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttc 202  Q
    ||||||||||||  |||||||||||||||||| |||||||||    
T  37489103 aaaacagcttatcaacatgtcataagttgttttcataagttc 37489062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 499768 - 499708
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  ||||||||||| ||| |  |||||||||||| ||||| ||||||||||||    
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcc 499708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 2092392 - 2092452
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||| ||| |||  |||||||||||| ||||||||||||| | ||||||||| |||||    
T  2092392 cttatggtaaaaagcaaaaaacagcttatggacatgtcataagctatttccataacttctc 2092452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 2092582 - 2092522
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||| |||| || |||||||| ||||| |||||| ||||||||||||| ||||| |||||    
T  2092582 ttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctctcc 2092522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 6109512 - 6109576
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||| ||||||  ||||||||||| ||||| ||||| |||||| || |||||||||| |||||    
T  6109512 gagcttttggaaataagctgaaaacaacttatggacatatcataatttttttccataagctctcc 6109576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 9104173 - 9104209
Alignment:
Q  150 gaaaatagctgaaaacagcttatagacatgtcataag 186  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  9104173 gaaattagttgaaaacagcttatagacatgtcataag 9104209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 14295550 - 14295598
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||||||| ||||| ||||||| ||||| |||||| ||||    
T  14295550 agctgaaaacagcttatcgacatatcataagctgttttcataagctctc 14295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 28586807 - 28586743
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||| ||||  ||||||||||||||||  || |||||||||| | |||||||||| |||||    
T  28586807 gagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcc 28586743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 50800056 - 50800007
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  50800056 agctgaaaacagcttatagacatgtcataagttgtttacattagttctcc 50800007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 6978988 - 6978941
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  6978988 agctgaaaacagcttatagacatgtcataagttatttcaataagttct 6978941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 7368077 - 7367966
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatcc 258  Q
    ||||| ||||||||| |||||||||||| ||||| ||| || ||||| || |||||| | ||| | |||| | | ||||||| ||||| ||| |||||||    
T  7368077 tgaaagcagcttataaacatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaatcc 7367978  T
Q  259 aaacagacccta 270  Q
    ||||||||||||    
T  7367977 aaacagacccta 7367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 27123393 - 27123330
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||||||  || |||||||| |||| ||||||||||||||||||||||||||| ||||    
T  27123393 gagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctc 27123330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 27970087 - 27970144
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||||    
T  27970087 gagcttatggataagtactgaaaacagcttatagacatgtcataagttgttttcataa 27970144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 1137741 - 1137813
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagt 213  Q
    |||||||||||||  | ||||||||| |||||  |||||||||||| ||||| ||||||||||||||| ||||    
T  1137741 gagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagt 1137813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 2874663 - 2874603
Alignment:
Q  143 gcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||||||||||  ||| ||||| || |||| ||||||||||||||||||||||||||||||    
T  2874663 gcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataagttct 2874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 3176141 - 3176073
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagt 213  Q
    |||||||||  ||||||||||| |||||||||||| |||||| ||||| |||||| |||||||| ||||    
T  3176141 ttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagt 3176073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 6987782 - 6987708
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  || |||||| || |||| ||||||||||||||||| |||||||| ||||| || ||||||    
T  6987782 gagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtct 6987708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 25571304 - 25571361
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagt 213  Q
    |||||||||||||||||  |||| ||||||  ||||||||||||||||||||| ||||    
T  25571304 agctgaaaacagcttatgaacatatcataaactgtttccataagttctcctaaacagt 25571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 53315375 - 53315484
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaa 260  Q
    |||| ||||||| ||||||| ||| ||||||| |||||| ||||  ||  ||||||| | | ||||||||   | ||||||||||| ||| |||||||||    
T  53315375 aaaatagcttatggacatgtgatatgttgttttcataagctctcacaaatagtcttatatgtgcttataccagtggataagctcaaataagtcaatccaa 53315474  T
Q  261 acagacccta 270  Q
    ||||||||||    
T  53315475 acagacccta 53315484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 4243617 - 4243656
Alignment:
Q  163 aacagcttatagacatgtcataagttgtttccataagttc 202  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  4243617 aacagattatggacatgtcataagttgtttccataagttc 4243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 11264330 - 11264404
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  || ||||||||| |||| |||||||||||||||| ||| ||| | ||||| || ||||||    
T  11264330 gagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtct 11264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 19304961 - 19305019
Alignment:
Q  147 atggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||  ||||||||||| ||||| ||||||||||||| |||||||| || ||||||    
T  19304961 atggaaacaagctgaaaacaacttatggacatgtcataagctgtttccacaaattctcc 19305019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 29467661 - 29467607
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||  ||||||||||||||||| |||||||||||||  ||||| |||||    
T  29467661 ttatggaaataagctgaaaacagcttatggacatgtcataagccgtttctataag 29467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 32071912 - 32071954
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||| |||||||||||| ||| |||||||||||||||||||||    
T  32071912 agcttaaaacagcttatggacgtgtcataagttgtttccataa 32071954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 45128350 - 45128288
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||  |||||||||||||| || ||||||  || ||||||||||||||| ||||    
T  45128350 agcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctc 45128288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 2996620 - 2996665
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||| ||||||| ||||||||||||||||||| |||||| ||||    
T  2996620 tgaaaaaagcttatggacatgtcataagttgttttcataagctctc 2996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 4691892 - 4691937
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||||||||| | ||| | ||||||||||||||||||||||||||    
T  4691892 agctgaaaacaacatatgggcatgtcataagttgtttccataagtt 4691937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 6428047 - 6428176
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    |||||||||||||   ||| ||| || ||||| ||||||||||||||||||| |||||  ||||  || | |||| | ||| ||||||||   || ||||    
T  6428047 gagcttatggaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatataa 6428146  T
Q  241 gctcaagtaattcaatccaaacagacccta 270  Q
    |||||| ||| ||||| |||||| ||||||    
T  6428147 gctcaaataagtcaattcaaacaaacccta 6428176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 23676727 - 23676783
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||||  |||| ||||||| ||||||| ||| |||||||||||||||||||    
T  23676727 agcttatggaaataagcttaaaacag-ttatagatatgccataagttgtttccataag 23676783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 9841114 - 9841158
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||    
T  9841114 aaaacagcttatggacatgtcatatgttgtttcgatatgttctcc 9841158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 14011263 - 14011307
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataa 185  Q
    |||||||||||||  |||||||||||||||| |||||||| ||||    
T  14011263 gagcttatggaaataagctgaaaacagcttaaagacatgtgataa 14011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 20936266 - 20936210
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    |||||||||  || ||||||||||||||  |||| ||||||||||||| ||||||||    
T  20936266 ttatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 21593043 - 21592983
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  |||||||| ||||||||| |||||||||||| || ||| ||||| |||||    
T  21593043 ttatggaaataagctgaaagcagcttataaacatgtcataagctgcttcaataagctctcc 21592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 21952997 - 21953041
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||| |||| ||||||||||||||| |||||||||| |||||    
T  21952997 aaaacaggttatggacatgtcataagttctttccataagctctcc 21953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 22662288 - 22662224
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||| ||||||||  ||||||||| |||||||  |||| ||||||||| ||| ||||||||||||    
T  22662288 gagcgtatggaaataagctgaaaatagcttatgaacatatcataagtttttttcataagttctcc 22662224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 24370979 - 24370932
Alignment:
Q  156 agctgaaaacagcttat--agacatgtcataagttgtttccataagtt 201  Q
    |||||||||| ||||||  | |||||||||||||||||||||||||||    
T  24370979 agctgaaaacggcttatgtatacatgtcataagttgtttccataagtt 24370932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 27124167 - 27124131
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttcca 195  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  27124167 tgaaaatagcttatagacatgtaataagttgtttcca 27124131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 53155304 - 53155352
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||| ||  |||||||||||||||||||||||| |||||| ||||    
T  53155304 agctgaaagcaatttatagacatgtcataagttgtttgcataagctctc 53155352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 26410308 - 26410396
Alignment:
Q  141 gagcttatggaaa-atagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    ||||||||||||| | |||| |||||||||| | |||||||||| || |||||||||||| ||||| ||||||||| ||||| ||||||    
T  26410308 gagcttatggaaataaagctaaaaacagcttctggacatgtcatgagctgtttccataagctctcccaagcagtctcagaagtgcttat 26410396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 11183574 - 11183625
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgttt 192  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  11183574 gagcttatggaaataagctgaaaacagcttatagacatatcataagttgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 14949910 - 14949969
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||| |||||||| ||||||    
T  14949910 agctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtct 14949969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 6950337 - 6950415
Alignment:
Q  127 aaagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||| || | |||||||||||||  ||||||||||| ||||| ||||||||||| ||||||| |||||| |||||    
T  6950337 aaagttatcctaaagagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcc 6950415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 10939451 - 10939523
Alignment:
Q  188 tgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaa 260  Q
    ||||| ||||||||||||||| |||||| ||||| ||||||||   ||||||| ||||| |||||||||||||    
T  10939451 tgttttcataagttctcctaaacagtctcagaagtgcttatacaggtagataaactcaaataattcaatccaa 10939523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 26479805 - 26479877
Alignment:
Q  132 tattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||  |||||||||||||   |||||||| | |||||||||||| ||||||||||||||||||| ||||    
T  26479805 tattctggagagcttatggaaatacgctgaaaaaaacttatagacatgacataagttgtttccataagctctc 26479877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 43504783 - 43504853
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtc 214  Q
    ||||||||||  |||||||||||||||||| ||| ||| |||||||||| ||| |||||||| || |||||    
T  43504783 cttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaacagtc 43504853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 11813131 - 11813082
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  11813131 agctgaaaacagcctatggatatgtcataaattgtttccataagttctcc 11813082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 13000464 - 13000408
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||  ||||||||||| ||| | |||||||||||||||||| ||||||    
T  13000464 agcttatggaaataagctgaaaacaacttgtggacatgtcataagttgttaccataa 13000408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 25869303 - 25869251
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccata 197  Q
    |||||||||  ||||||||||| ||||| ||||||||||||||| ||||||||    
T  25869303 ttatggaaataagctgaaaacaacttatggacatgtcataagttatttccata 25869251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 30259146 - 30259206
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||  | ||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  30259146 cttatggaaataaactgaaaacaacttatagacatatcataagctgtttccataagctctc 30259206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 39551230 - 39551186
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||    
T  39551230 aaaacagcttttggacatgtcataagttgtttccataaattctcc 39551186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 43709309 - 43709349
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  43709309 tgaaaatagcttatagacatgtcataagttatttccataag 43709349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 3090190 - 3090264
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatact 231  Q
    ||||||||||||||||  |||||| |||||||||||| |||||| ||| ||||  ||||| ||||| |||||||||    
T  3090190 agctgaaaacagcttactgacatgccataagttgttttcataagatct-ctaaatagtctcagaagagcttatact 3090264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 11569483 - 11569424
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||| |||||  |||||||||||| |||||||||||| |||| ||| ||||||    
T  11569483 agctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtct 11569424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 30191178 - 30191095
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttat 228  Q
    |||||||||  |||||||||||  || |  ||||||||||||||||||||||||| ||||| || |||||| | ||| ||||||    
T  30191178 ttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttat 30191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 30988012 - 30987969
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||    
T  30988012 aaaatagcttatggacatgtcataagttgtttccataagctctc 30987969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 45071428 - 45071467
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  45071428 agcttatagacatgtcataagttgttttcataagctctcc 45071467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 4560531 - 4560593
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||||||| ||||  | ||||||||||||||  ||||||| ||||||| ||||||||||||||    
T  4560531 gagcttatcgaaataatctgaaaacagcttactgacatgttataagttatttccataagttct 4560593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 31875636 - 31875578
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||| |||  || ||||||  |||||| ||||||||||||||||||||||||||    
T  31875636 gagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataag 31875578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 40356972 - 40357084
Alignment:
Q  159 tgaaaacagcttatagacatg---tcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaa 255  Q
    |||||||||||||| ||||||   ||||||| | |||| |||||  ||| ||| || |||  |||| |||||||| | ||||||| ||||| ||| ||||    
T  40356972 tgaaaacagcttatggacatggtgtcataagctatttcaataagccctcataaacaatctctgaagtgcttatacctgtagataaactcaaataaatcaa 40357071  T
Q  256 tccaaacagaccc 268  Q
    |||||||||||||    
T  40357072 tccaaacagaccc 40357084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 42597470 - 42597512
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataag 186  Q
    ||||||||||  || ||||||||||||||||||||||||||||    
T  42597470 cttatggaaataagttgaaaacagcttatagacatgtcataag 42597512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 4055657 - 4055600
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||| |||||  |||||||||||| |||| ||||||||||||||| |||| ||||    
T  4055657 gagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 4055600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 8255439 - 8255484
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||    
T  8255439 tgaaaacaacttatgcacatgtcattagttgtttccataagttctc 8255484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 10062167 - 10062118
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||||||||| |||||||||  |||| ||||||| |||||    
T  10062167 agctgaaaacagcttatagaaatgtcataaaatgttgccataagctctcc 10062118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 10383914 - 10383975
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttc 202  Q
    |||||||||||||  ||||| |||||||||||  | |||||||||| ||||| |||||||||    
T  10383914 gagcttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 11188179 - 11188122
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||  |||||||||||||||||| ||||| ||| |||| |||||| ||||||    
T  11188179 ctgaaaacaagttatagacatgtcataagctgttttcattagttatcctaaacagtct 11188122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 11795121 - 11795166
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataag 186  Q
    |||||||||||||  |||||||||||| |||| |||||||||||||    
T  11795121 gagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 27119955 - 27119910
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||    
T  27119955 agctgaaaacaacttatagacatgtcattagtggttttcataagtt 27119910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 34293215 - 34293163
Alignment:
Q  313 catgtttttgtaccttgtagatttgatataattggtaataatttcacctatgct 366  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| |||| ||||    
T  34293215 catgttttt-taccttgtagattgtatataattggtaataatttgacctgtgct 34293163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 2458607 - 2458543
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||  | |||||||||||||||  ||||| |||||| ||| | ||||||||||||    
T  2458607 gagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttctcc 2458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 5088881 - 5088945
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||| ||||  || |||||||||||||| ||||||| ||||  |||||||||||| |||||    
T  5088881 gagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccataagctctcc 5088945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 11119022 - 11118974
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||||||  ||||||||||||| || |||||||| |||||    
T  11119022 gctgaaaacagcttatgaacatgtcataagtagtctccataagctctcc 11118974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 11771034 - 11770990
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||||||| | ||||||||| ||||||||||||| ||||||||||    
T  11771034 tgaaaacaacgtatagacatatcataagttgttttcataagttct 11770990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 12361208 - 12361284
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| |  ||||| |||||||  || |||||||||||||| ||||||||||||| | |||| ||||| ||||    
T  12361208 aagttattcaggagagctaatggaaataagttgaaaacagcttatggacatgtcataagctatttctataagatctc 12361284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 26370997 - 26371057
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||| |||||||||||| || |   ||||||||||||| ||||||||||| ||||    
T  26370997 cttatggaaattagctgaaaacaactgacgcacatgtcataagtagtttccataagatctc 26371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 32841012 - 32840952
Alignment:
Q  156 agctgaaaacagcttatagaca-tgtcataagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||| |||||  ||| ||||||||||||||| |||||||||||| || ||||||    
T  32841012 agctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtct 32840952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 34849135 - 34849207
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcat-aagttgtttccataagttctcctaagcagtct 215  Q
    ||||||||||  |||||||||| ||||||  ||||||||| ||||||||| ||| |||||||| || ||||||    
T  34849135 cttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagttctcccaaacagtct 34849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 37740462 - 37740411
Alignment:
Q  146 tatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||  ||||||||| || |||| |||||||||||||||||||||||||    
T  37740462 tatggaaataagctgaaaatag-ttatggacatgtcataagttgtttccataa 37740411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 39049319 - 39049359
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  39049319 tgaaaacagcttattgacatgttataagttgttttcataag 39049359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 42215347 - 42215283
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||| |||  |||||||||||||||||  ||| |||||||| ||||| ||| ||||||||    
T  42215347 gagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattagttctcc 42215283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 160014 - 159891
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    |||||| ||||||  |||||||||| |||||||||||||||||||  ||||||||| |||||||| ||  ||| | | ||| | ||||| |  |||||||    
T  160014 gagcttgtggaaataagctgaaaactgcttatagacatgtcataaactgtttccattagttctccaaaatagtttcacaagtgtttatattagtagataa 159915  T
Q  241 gctcaagtaattcaatccaaacag 264  Q
    |||||| |||  ||||||||||||    
T  159914 gctcaaataagccaatccaaacag 159891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 8820333 - 8820259
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||||  ||||||||||||||| |  |||||||| ||| |||||||||||| |||| ||||||||||    
T  8820333 gagcttatggaaataagctgaaaacagcttgtgaacatgtcagaagctgtttccataaggtctcttaagcagtct 8820259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 34652077 - 34652019
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||  || |||||||||||||| |||||||||||||||||||| |||||    
T  34652077 gagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataag 34652019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 43529899 - 43529773
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataa 240  Q
    ||||||||| |||  | ||||||| |||||||  ||||| |||||| ||||| ||||| |||||| || |||| | ||||| ||||||||   |||||||    
T  43529899 gagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttataccaatagataa 43529800  T
Q  241 gctcaagtaattcaatccaaacagacc 267  Q
    |||||| ||| ||||| ||||||||||    
T  43529799 gctcaaataagtcaattcaaacagacc 43529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 14316171 - 14316122
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  14316171 agctgaaaacagcttatacatatgtcataagttgtttccataagctctcc 14316122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 28677713 - 28677576
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggctta 227  Q
    |||||||| ||  |||||||||||||  ||| ||||||| |||||  | |||||||||| ||||| |||||||||||| || ||||||||| ||  ||||    
T  28677713 aagttattttggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtcttagcagtactta 28677614  T
Q  228 tacttttagataagctcaagtaattcaatccaaacaga 265  Q
    | |   || ||||||||||  || ||||||||||||||    
T  28677613 tgcaagtaaataagctcaaaaaaatcaatccaaacaga 28677576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 787376 - 787424
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  787376 agctgaaaacagcttatggacatgtcataagctgttttcataagttctc 787424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 1647265 - 1647332
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaa 208  Q
    |||||||||||||  |||||||||||||||||   ||||||||||| ||||| |||||||||| ||||    
T  1647265 gagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttcttctaa 1647332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 28803546 - 28803451
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaaa 261  Q
    ||||||| |||||||||||||||||||||||| ||||||  || |||||| | | | |||||| |   ||||||||||||| ||| ||||||||||    
T  28803546 agcttatggacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 40158734 - 40158821
Alignment:
Q  128 aagttattctgacgagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtct 215  Q
    |||||||||||  ||||||||| ||   ||||||||||| |||||| |||||||||||| ||||| ||||||||| || || ||||||    
T  40158734 aagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtct 40158821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 44606136 - 44606089
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  44606136 agctgaaaacaacttatggacatgtcataagttgttttcataagttct 44606089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 1939373 - 1939323
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtt 191  Q
    |||||||||||||  || |||||||||||||| ||||||||||||||||||    
T  1939373 gagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 17380607 - 17380661
Alignment:
Q  151 aaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| |||||| |||||    
T  17380607 aaaaaagctgaaaacagcttattgacatgtcacaagttgtttacataagatctcc 17380661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 32821838 - 32821895
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||||||| ||||  | ||||||||||||||| |||||||||||||||||||| ||||    
T  32821838 gagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataa 32821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 38388707 - 38388780
Alignment:
Q  133 attctgacgagcttatggaaaatagctgaaaa-cagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||| || ||||||||||  ||||||||| ||| ||||  ||||||||||||||||| |||||||||||||    
T  38388707 attctgaagaacttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagttctcc 38388780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 9996803 - 9996895
Alignment:
Q  177 atgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttttagataagctcaagtaattcaatccaaacagaccct 269  Q
    ||||||||||||||||| ||||| ||||| ||||||||| | |||  ||||| ||  | ||||||||||| ||| |||| |||||||| ||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaacaggccct 9996895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 11344793 - 11344753
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  11344793 tgaaaacagtttatggacatgtcataagttgtttccataag 11344753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 37186341 - 37186277
Alignment:
Q  157 gctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaag 221  Q
    ||||||||||||| | ||||||||||||||||||||| ||||  ||||| || |||| |||||||    
T  37186341 gctgaaaacagctcacagacatgtcataagttgtttctataatctctccgaaacagttttagaag 37186277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 41817197 - 41817269
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagt 213  Q
    |||||||||||||  |||||||||||  ||||  |||||||||||| ||||| ||||| ||||||||| ||||    
T  41817197 gagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 43985238 - 43985290
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttc 193  Q
    |||||||||||||  || |||||| ||||||| ||||||||||||||||||||    
T  43985238 gagcttatggaaacaagttgaaaaaagcttatggacatgtcataagttgtttc 43985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 1830075 - 1830138
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    ||||||||||||  ||||||||||  | ||| ||||||||||||| |||||||||||| |||||    
T  1830075 agcttatggaaataagctgaaaactccctatggacatgtcataagatgtttccataagctctcc 1830138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 9878704 - 9878665
Alignment:
Q  160 gaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  9878704 gaaaacaacttatggacatgtcataagttgtttccataag 9878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 10285892 - 10285947
Alignment:
Q  144 cttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||  || |||||||||||||| ||||||||||||||| ||| ||||||    
T  10285892 cttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataag 10285947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 30538199 - 30538156
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||    
T  30538199 agctgaaaacaacttatggacatgtcataagttgtttctataag 30538156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 41032992 - 41032933
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||||  ||||||||||| ||||||||||||  | |||||||||| ||||||||||    
T  41032992 ttatggaaataagctgaaaacaacttatagacatggaagaagttgtttctataagttctc 41032933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 43065491 - 43065428
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||||||||||| |||||| ||||    
T  43065491 gagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 14451090 - 14451040
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgttt 192  Q
    ||||| ||||||  ||||||||||||||||| | |||||||||||||||||    
T  14451090 agcttgtggaaataagctgaaaacagcttatggtcatgtcataagttgttt 14451040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 27237930 - 27237872
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttct 203  Q
    |||||||||  |||| ||||||||||||  |||||||||||| |||||| |||||||||    
T  27237930 ttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataagttct 27237872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 45314914 - 45314960
Alignment:
Q  158 ctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| |||||| | |||||||||||||||| |||||||||||    
T  45314914 ctgaaaacaacttataaatatgtcataagttgtttacataagttctc 45314960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 4550796 - 4550849
Alignment:
Q  161 aaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtc 214  Q
    |||| |||||||  ||||||||||||||||||||||||| ||||| || |||||    
T  4550796 aaaatagcttatgaacatgtcataagttgtttccataagctctcccaaacagtc 4550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 6561391 - 6561424
Alignment:
Q  166 agcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||| |||||||||||||||||||||||    
T  6561391 agcttatagatatgtcataagttgtttccataag 6561424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 15120227 - 15120276
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||| ||||||||| ||  ||||||||||||||||||||||||| |||||    
T  15120227 agcttaaaacagctaatgaacatgtcataagttgtttccataagctctcc 15120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 16398494 - 16398449
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| ||||||||| ||||||||||||||||||| |||| ||||||    
T  16398494 tgaagacagcttatggacatgtcataagttgttttcatatgttctc 16398449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 32106822 - 32106777
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||||| ||| |||||||||| ||||| |||||||||||    
T  32106822 tgaaaacagcttacagatatgtcataagctgttttcataagttctc 32106777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 33942179 - 33942228
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgt 190  Q
    ||||| ||| ||| ||||||||||||||||||  ||||||||||||||||    
T  33942179 gagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgt 33942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 41809285 - 41809232
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttcca 195  Q
    ||||||||||||  |||| |||||| |||||  |||||||||||||||||||||    
T  41809285 agcttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttcca 41809232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 1160711 - 1160655
Alignment:
Q  142 agcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    ||||||||||||  | || |||||| ||||| ||||||||||| |||||||||||||    
T  1160711 agcttatggaaataaactaaaaacaacttatggacatgtcataggttgtttccataa 1160655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 1742069 - 1742009
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcc 205  Q
    |||||||||  || |||| | |||||||  ||||||||||||||||||||||||| |||||    
T  1742069 ttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcc 1742009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 10285399 - 10285439
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccat 196  Q
    ||||||||||||||||| |||||||||||| |||| |||||    
T  10285399 agctgaaaacagcttatggacatgtcataacttgtctccat 10285439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 12215854 - 12215894
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||||||| ||||||||||||| | ||||||||||    
T  12215854 tgaaaacagcttatggacatgtcataagctatttccataag 12215894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 33231991 - 33231930
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||| |||  ||||||||||||||||| |||  ||||||||| ||||||||||| ||||    
T  33231991 gagcttatgcaaatcagctgaaaacagcttatggac--gtcataagtggtttccataagctctc 33231930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 12730 - 12682
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  12730 agctgaaaacaacttatggacatgtcataagttgtttccataaggtctc 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 6535 - 6478
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||||||||||||  | ||||||||| ||||||||||||||||| |||||||| ||||    
T  6535 gagcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctataa 6478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 13555 - 13498
Alignment:
Q  141 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 198  Q
    |||||||||||||  | ||||||||| ||||||||||||||||| |||||||| ||||    
T  13555 gagcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctataa 13498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 27620 - 27685
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaag 221  Q
    ||||||||||| ||||||| ||||||||||| | |||||||||| ||||| || |||||| |||||    
T  27620 agctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaacagtctcagaag 27685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 306370 - 306413
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||    
T  306370 agctgaaaacagcttatgggcatgtcataagctgtttccataag 306413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 10654 - 10600
Alignment:
Q  145 ttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataag 199  Q
    |||||||||  ||||||||||| ||||| |||||||||| |||||||| ||||||    
T  10654 ttatggaaataagctgaaaacaacttatggacatgtcattagttgtttacataag 10600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 69002 - 68960
Alignment:
Q  159 tgaaaacagcttatagacatgtcataagttgtttccataagtt 201  Q
    |||||||||||||||||||||||||| | ||||| ||||||||    
T  69002 tgaaaacagcttatagacatgtcatacgctgttttcataagtt 68960  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 9663 - 9615
Alignment:
Q  156 agctgaaaacagcttatagacatgtcataagttgtttccataagttctc 204  Q
    |||| ||||||||||||  |||||| ||||||||||| |||||||||||    
T  9663 agctaaaaacagcttatgaacatgtaataagttgttttcataagttctc 9615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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