View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3767_low_19 (Length: 287)

Name: NF3767_low_19
Description: NF3767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3767_low_19
NF3767_low_19
[»] chr2 (9 HSPs)
chr2 (90-268)||(7381681-7381857)
chr2 (95-197)||(21603953-21604055)
chr2 (96-197)||(34392156-34392257)
chr2 (1-63)||(7381619-7381681)
chr2 (96-196)||(37357997-37358097)
chr2 (115-197)||(23863878-23863958)
chr2 (103-183)||(4775636-4775716)
chr2 (121-197)||(4779605-4779681)
chr2 (144-195)||(41095863-41095914)
[»] chr4 (16 HSPs)
chr4 (98-197)||(22343334-22343433)
chr4 (103-197)||(33249449-33249543)
chr4 (103-269)||(12473706-12473871)
chr4 (103-269)||(12528115-12528280)
chr4 (96-197)||(21260789-21260890)
chr4 (96-197)||(51811909-51812010)
chr4 (96-178)||(55590477-55590559)
chr4 (103-197)||(35869646-35869740)
chr4 (103-197)||(52012780-52012874)
chr4 (103-187)||(34829168-34829252)
chr4 (103-195)||(52910126-52910218)
chr4 (103-197)||(9799438-9799532)
chr4 (103-197)||(49999663-49999757)
chr4 (121-194)||(46719950-46720023)
chr4 (226-271)||(35781033-35781078)
chr4 (103-197)||(47943160-47943255)
[»] chr3 (17 HSPs)
chr3 (94-269)||(44380247-44380421)
chr3 (103-197)||(50934502-50934596)
chr3 (103-197)||(47186177-47186271)
chr3 (103-197)||(47426352-47426446)
chr3 (103-197)||(31187145-31187239)
chr3 (105-194)||(33509684-33509773)
chr3 (103-197)||(42664675-42664769)
chr3 (103-197)||(34029366-34029460)
chr3 (96-197)||(17466268-17466369)
chr3 (103-197)||(39498744-39498838)
chr3 (96-169)||(32319468-32319541)
chr3 (114-197)||(37742738-37742821)
chr3 (96-197)||(35094541-35094644)
chr3 (96-167)||(10179868-10179939)
chr3 (103-154)||(21963073-21963124)
chr3 (96-136)||(10123242-10123282)
chr3 (226-262)||(19619222-19619258)
[»] scaffold0032 (1 HSPs)
scaffold0032 (96-197)||(34189-34290)
[»] chr5 (14 HSPs)
chr5 (106-269)||(33858542-33858704)
chr5 (96-197)||(39570118-39570219)
chr5 (103-197)||(29989964-29990058)
chr5 (98-197)||(19357336-19357435)
chr5 (103-197)||(13015383-13015477)
chr5 (103-197)||(38010689-38010783)
chr5 (96-197)||(11607609-11607710)
chr5 (103-196)||(13086755-13086848)
chr5 (103-197)||(1826261-1826355)
chr5 (103-197)||(13421085-13421179)
chr5 (103-197)||(13478120-13478214)
chr5 (95-197)||(9827782-9827884)
chr5 (117-197)||(33271630-33271710)
chr5 (149-197)||(37881189-37881237)
[»] chr7 (7 HSPs)
chr7 (96-197)||(35341531-35341632)
chr7 (103-196)||(48250156-48250249)
chr7 (105-194)||(31306951-31307041)
chr7 (145-269)||(32694574-32694697)
chr7 (103-165)||(40856394-40856456)
chr7 (97-269)||(48072385-48072554)
chr7 (103-197)||(40893116-40893211)
[»] chr1 (13 HSPs)
chr1 (94-197)||(32676129-32676232)
chr1 (103-197)||(8809715-8809809)
chr1 (103-197)||(2569039-2569133)
chr1 (96-194)||(25161304-25161402)
chr1 (103-197)||(29119399-29119493)
chr1 (103-197)||(6223053-6223147)
chr1 (105-182)||(7214501-7214578)
chr1 (96-197)||(8462124-8462224)
chr1 (103-268)||(46435470-46435622)
chr1 (130-193)||(3688917-3688980)
chr1 (103-197)||(35998254-35998348)
chr1 (103-160)||(16679811-16679867)
chr1 (142-194)||(8555470-8555522)
[»] chr6 (6 HSPs)
chr6 (103-197)||(34245569-34245663)
chr6 (103-269)||(5403880-5404045)
chr6 (103-194)||(11113558-11113649)
chr6 (103-271)||(1211846-1212013)
chr6 (94-197)||(32644912-32645014)
chr6 (103-155)||(11753169-11753221)
[»] chr8 (8 HSPs)
chr8 (108-197)||(18168392-18168481)
chr8 (108-197)||(18631949-18632038)
chr8 (96-197)||(41179638-41179739)
chr8 (103-269)||(24337834-24337999)
chr8 (103-197)||(1514805-1514899)
chr8 (109-197)||(4708382-4708470)
chr8 (97-197)||(11254103-11254202)
chr8 (103-197)||(32825910-32826004)
[»] scaffold0229 (1 HSPs)
scaffold0229 (103-197)||(13081-13175)
[»] scaffold0519 (1 HSPs)
scaffold0519 (97-197)||(11191-11290)
[»] scaffold0263 (2 HSPs)
scaffold0263 (131-197)||(23174-23240)
scaffold0263 (103-160)||(23095-23152)
[»] scaffold0041 (1 HSPs)
scaffold0041 (103-197)||(73073-73168)


Alignment Details
Target: chr2 (Bit Score: 94; Significance: 6e-46; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 90 - 268
Target Start/End: Original strand, 7381681 - 7381857
Alignment:
Q  90 ttttatggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttat 189  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  7381681 ttttatggattccgcttgtgtaccattaaggtaccaatggtatatactattggccaattagagtgtgccatctaccaatgttactttataaattctttat 7381780  T
Q  190 ttgatatannnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagt 268  Q
    ||||||||        ||||| |||||||| | || ||||||||||||||||| ||||| |||||||||||||||||||    
T  7381781 ttgatata--ttttttaaaggatgtgtcatgtgacacattttaattgggcaatagtatataccattatagtacgcaagt 7381857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 21603953 - 21604055
Alignment:
Q  95 tggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    ||||||| |||||||||||||||||||| ||||||||||||  |||||||||||| ||||| |||| |||||||||||||||||||||  ||||||||||    
T  21603953 tggattccacttgtgtaccattaaggtaccaatggtatataccattgaccaattatagtgtatcacctaccaatgttactttataaatgttttatttgat 21604052  T
Q  195 ata 197  Q
    |||    
T  21604053 ata 21604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 34392257 - 34392156
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||||||||||| ||||| ||||||||||||  |||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||    
T  34392257 ggattccacttgtgtaccattgaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatcttactttataaatgctttatttgata 34392158  T
Q  196 ta 197  Q
    ||    
T  34392157 ta 34392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7381619 - 7381681
Alignment:
Q  1 gtgcttgatattcaatttgtgattacttttatttttatgaagttaatttgtgattacttattt 63  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7381619 gtgcttgatattcaatttgtgattacttttatttttatgaagataatttgtgattacttattt 7381681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 37358097 - 37357997
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| ||||||||| |||||||||| ||||| ||||||  |||||| |||||||||||||||| || |||||||||||||||||| |||||||| |||    
T  37358097 ggattccacttgtgtatcattaaggtaccaatgatatataccattgactaattagagtgtgtcacctatcaatgttactttataaatgctttatttaata 37357998  T
Q  196 t 196  Q
    |    
T  37357997 t 37357997  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 23863958 - 23863878
Alignment:
Q  115 ttaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||| |||||||||||  |||||  ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  23863958 ttaaggtaccaatggtatat--tattggtcaattagagtgtgccacctaccaatgttactttataaatgctttatttgatata 23863878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 4775636 - 4775716
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaatt 183  Q
    |||| |||||||||||| || ||||| |||||||||||| ||||||||| ||| |||  ||||||| ||||||||| ||||    
T  4775636 acttatgtaccattaagctaccaatgatatatattattggccaattagaatgtctcatctaccaatcttactttattaatt 4775716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 4779605 - 4779681
Alignment:
Q  121 tatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||| |||||||  ||||| || ||| |||||| | | || |||||||||||||||||| ||||||||||||||    
T  4779605 tatcaatagtatataccattgatcacttatagtgtgccgcctaacaatgttactttataaatactttatttgatata 4779681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 41095914 - 41095863
Alignment:
Q  144 caattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||||||||   ||| ||||||||||||||||||||| ||||||||||||    
T  41095914 caattagagtgcaccacctaccaatgttactttataaatgctttatttgata 41095863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 22343334 - 22343433
Alignment:
Q  98 attcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||||||| ||||||||||||||    
T  22343334 attccacttgtgtaccattaaggtatcaatggtatatatcattgaccaattagagtgtgtcatctatcaatgttactttataaatgctttatttgatata 22343433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 33249543 - 33249449
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||||||||||  |||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33249543 acttgtgtaccattaaggtacaaatggtatatacaattggccaattagagtgtgtcacctaccaatgttactttataaatgctttatttgatata 33249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 12473706 - 12473871
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    |||||| ||||||||||||| ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || ||||||||||||||         
T  12473706 acttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatata-tttt 12473804  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
       |||||||||| || || || |||| |||||| ||||||||||| |||||||| |||| ||||||    
T  12473805 tttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtacacaagtg 12473871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 12528115 - 12528280
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    |||||| ||||||||||||| ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || ||||||||||||||         
T  12528115 acttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatata-tttt 12528213  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
       |||||||||| || || || |||| |||||| ||||||||||| |||||||| |||| ||||||    
T  12528214 tttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtacacaagtg 12528280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 21260789 - 21260890
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||| | ||||||||||||| ||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  21260789 ggattccacttatataccattaaggtaccaatgatatatatcattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgata 21260888  T
Q  196 ta 197  Q
    ||    
T  21260889 ta 21260890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 51811909 - 51812010
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| ||| |||||||||||||||||||| | |||||||||||| ||||||||||| || ||| |||||||||||||||||||||| ||| |||||||    
T  51811909 ggattccactcgtgtaccattaaggtatcaaagatatatattattggccaattagagtatgccacctaccaatgttactttataaattttttttttgata 51812008  T
Q  196 ta 197  Q
    ||    
T  51812009 ta 51812010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 55590477 - 55590559
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttat 178  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||    
T  55590477 ggattccacttgtgtaccattaaggtaccaatggtatatatcattgatcaattatagtgtgtcacctaccaatgttactttat 55590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 35869740 - 35869646
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||| | |||| ||| ||||||||||||| |||||||  |||||||||||||    
T  35869740 acttgtgtaccattaaggtaccaatggtatataccattgaccaattataatgtgccacctaccaatgttactatataaatgttttatttgatata 35869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 52012780 - 52012874
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| | |||||| ||| |||||||||||||||||||||  |||||||||||||    
T  52012780 acttgtgtaccattaaggtaccaatgttatataacattgaccaataaaagtgtgccacataccaatgttactttataaatgttttatttgatata 52012874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 34829252 - 34829168
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattcttt 187  Q
    |||| ||||| ||||||||| ||||| ||||||| | || ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  34829252 acttatgtactattaaggtaccaatgatatatatcaatggccaattaaagtgtgtcacctaccaatgttactttataaatgcttt 34829168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 52910218 - 52910126
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    ||||||||||||| | |||| ||||| ||||||  |||| ||||||| |||||| ||| ||||||| ||||||||||||| ||||||||||||    
T  52910218 acttgtgtaccataatggtaccaatgttatataccattggccaattaaagtgtgccacctaccaatattactttataaatgctttatttgata 52910126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 9799532 - 9799438
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| ||||||||||||| ||||| ||||||  |||||||||  ||| |||| ||| |||||||||||||||||||||  ||||||| |||||    
T  9799532 acttgtataccattaaggtaccaatgttatataacattgaccaacaagaatgtgccacataccaatgttactttataaatgttttatttaatata 9799438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 49999757 - 49999663
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||| ||| ||  |||| ||| | | ||||  ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  49999757 acttgtgtaccatcaagatactaatgttatgtgtcattggtcaattagagtgtgtcacataccaatgttattttataaatgctttatttgatata 49999663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 46719950 - 46720023
Alignment:
Q  121 tatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    |||||||| ||||||  |||||||||| |||||||| ||| ||| ||||||||||||||||| |||||||||||    
T  46719950 tatcaatgttatataacattgaccaataagagtgtgccacatacaaatgttactttataaatactttatttgat 46720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 35781033 - 35781078
Alignment:
Q  226 cattttaattgggcaatggtataaaccattatagtacgcaagtgat 271  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  35781033 cattctaattgggcaatggtatataccattatggtacgcaagtgat 35781078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 47943160 - 47943255
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattatt-gaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||||||  || ||||| |||||| |||| ||||||| | | |||| ||| ||||||| ||| |||||||||  |||||||||||||    
T  47943160 acttgtgtaccattaaaataccaatgttatataatatttgaccaataaaaatgtgccacataccaatattattttataaatattttatttgatata 47943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 44380247 - 44380421
Alignment:
Q  94 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 193  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| || |||| ||||||||||||| ||||||||||    
T  44380247 atggattccacttgtgtaccattaaggtaccaatggtatatactattgaccaattatagtgtgtcacctatcaatattactttataaatgctttatttga 44380346  T
Q  194 tatannnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
    ||||        |||||||||| ||  | || |||| ||||||| |||||||||| |||||||| |||| ||||||    
T  44380347 tata-cttttttaaagggtgtgccacgtgacacattctaattggacaatggtatataccattatggtacacaagtg 44380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 50934502 - 50934596
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  50934502 acttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacttaccaatgttactttataaatgcattatttgatata 50934596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 47186177 - 47186271
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  |||| ||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  47186177 acttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgatata 47186271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 47426352 - 47426446
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| |||| |||||||  |||| |||||||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  47426352 acttgtgtaccattaaggtaccaatagtatataccattggccaattagagtgtgtcacctatcaatgttactttatagatgctttatttgatata 47426446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 31187239 - 31187145
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||| ||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  31187239 acttatgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgatata 31187145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 33509684 - 33509773
Alignment:
Q  105 ttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||||||||| ||| ||||||| |||||||||| || |||||||||||    
T  33509684 ttgtgtaccattaaggtactaatagtatatatcattgaccaattagagtgtgccacctaccaatattactttatagatgctttatttgat 33509773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 42664675 - 42664769
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||| | ||||||  |||||||||| |||||||| ||| ||||||||||| |||||||||  |||||||||||||    
T  42664675 acttgtgtaccattaaggtaccaaagttatataacattgaccaataagagtgtgccacataccaatgttattttataaatgttttatttgatata 42664769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 34029460 - 34029366
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| ||||||||||||| ||||| ||||||  ||||| |||| |||||||| ||| ||| |||||||||||||||||  |||||||||||||    
T  34029460 acttgtttaccattaaggtaccaatgttatataacattgatcaataagagtgtgccacatactaatgttactttataaatgttttatttgatata 34029366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 17466268 - 17466369
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| | |||||||| ||| |  |||||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||||||  |||| ||||||    
T  17466268 ggattccatttgtgtacgattcaaatatcaatggtatatatcattggtcaattagagtgtgtcacctatcaatgttactttataaatgatttagttgata 17466367  T
Q  196 ta 197  Q
    ||    
T  17466368 ta 17466369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 39498838 - 39498744
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||| ||| ||||| ||||||||||||  |||||| |||||||||| || | |||||| |||||||||  ||||||| |||||    
T  39498838 acttgtgtaccattaaagtaccaatgatatatattattggtcaattaaagtgtgtcacctatcgatgttattttataaatattttatttaatata 39498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 32319541 - 32319468
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatg 169  Q
    |||||| |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||| ||| ||||    
T  32319541 ggattctacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctacaaatg 32319468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 37742738 - 37742821
Alignment:
Q  114 attaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||| ||||||||||||| ||||  |||||||||| || ||| |||||||||||| |||  ||| ||||||||||||||    
T  37742738 attaaggtaccaatggtatatatcattggtcaattagagtatgccacctaccaatgttacattaccaatgctttatttgatata 37742821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 35094541 - 35094644
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaatta--gagtgtgtcacttaccaatgttactttataaattctttatttga 193  Q
    |||||| ||||  |||||||||| ||| || |||||||||  |||||| |||||  |||| || ||| |||||||||||||||||||||  |||||||||    
T  35094541 ggattccacttcagtaccattaaagtaccagtggtatataccattgactaattatagagtatgccacctaccaatgttactttataaatattttatttga 35094640  T
Q  194 tata 197  Q
    ||||    
T  35094641 tata 35094644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 10179939 - 10179868
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaa 167  Q
    |||||| |||||||||||||||| ||| ||||||||||||  ||||  ||||||||||||| ||| ||||||    
T  10179939 ggattccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgccacctaccaa 10179868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 21963124 - 21963073
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtg 154  Q
    |||| ||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  21963124 acttatgtaccattaaggtatcaatgttatataacattgaccaataagagtg 21963073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 10123282 - 10123242
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatat 136  Q
    |||||| |||||||||||||||| ||||||||| |||||||    
T  10123282 ggattccacttgtgtaccattaaagtatcaatgttatatat 10123242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 19619222 - 19619258
Alignment:
Q  226 cattttaattgggcaatggtataaaccattatagtac 262  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  19619222 cattttaattgggcaatggtatataccattatggtac 19619258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 34189 - 34290
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||  |||||||||||    
T  34189 ggattccacttgtgtaccattaaggtaccaatggtatatattattggccaattagagtgtgccacttaccaatattactttataaatattttatttgata 34288  T
Q  196 ta 197  Q
    ||    
T  34289 ta 34290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 269
Target Start/End: Complemental strand, 33858704 - 33858542
Alignment:
Q  106 tgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnnnnn 205  Q
    ||||||||||||||||| |||| |||||||| |||||||||||| |||||| ||| |||||||||||||||||||||  |||||||||||||            
T  33858704 tgtgtaccattaaggtaccaatagtatatatcattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgatata-ctttttt 33858606  T
Q  206 aaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
    |||||||||| ||  | || |||| |||||||||||||||||| |||||||| |||| ||||||    
T  33858605 aaagggtgtgccacgtgacacattctaattgggcaatggtatataccattatggtacacaagtg 33858542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 39570219 - 39570118
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| ||||||||| |||||| ||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  39570219 ggattccacttgtgtatcattaaagtatcaatggtatataccattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgata 39570120  T
Q  196 ta 197  Q
    ||    
T  39570119 ta 39570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 29989964 - 29990058
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  29989964 acttgtgtaccattaaggtatcaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgatata 29990058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 19357435 - 19357336
Alignment:
Q  98 attcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||| ||||||||||||||| |||| ||||||||||||  |||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||    
T  19357435 attccacttgtgtaccattagggtaccaatggtatataccattggccaattagagtgtgccacctaccaatattactttataaatgctttatttgatata 19357336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 13015383 - 13015477
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  13015383 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatattttatttgatata 13015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 38010783 - 38010689
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  |||| ||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  38010783 acttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgatata 38010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 11607710 - 11607609
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||| ||||||||||||| ||||||||||||  |||||||||||| |||||| ||| ||||||| |||||||||||||  |||||||||||    
T  11607710 ggattccacttgtataccattaaggtaccaatggtatataccattgaccaattatagtgtgccacctaccaatattactttataaatgttttatttgata 11607611  T
Q  196 ta 197  Q
    ||    
T  11607610 ta 11607609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 13086755 - 13086848
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 196  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| ||||||||||| |||||||||  ||||||||||||    
T  13086755 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttattttataaatattttatttgatat 13086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 1826261 - 1826355
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||| ||| ||||||||||||  ||||  ||||||||||||||||| ||||||| ||||||| || || ||||||||||||||    
T  1826261 acttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgtcacctaccaatattactttgtagatgctttatttgatata 1826355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 13421179 - 13421085
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||||||||| ||||||  ||||| |||| ||||||| |||  || |||||||||||||||||| |||||||| |||||    
T  13421179 acttgtgtaccattaaggtatcaatgttatataacattgatcaataagagtgtatcaaatatcaatgttactttataaatgctttatttaatata 13421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 13478214 - 13478120
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||| | ||||| ||||||  |||||||||| |||||||| ||| ||||| |||||||||||||||  |||||||||||||    
T  13478214 acttgtgtaccattaaggaaccaatgttatataacattgaccaataagagtgtgccacataccattgttactttataaatattttatttgatata 13478120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 9827782 - 9827884
Alignment:
Q  95 tggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    ||||||| |||||||||||||||||||| ||||||||||||   ||   ||||||||||||  ||| ||||||| |||||||||||||  ||||||||||    
T  9827782 tggattccacttgtgtaccattaaggtaccaatggtatatacctttagtcaattagagtgtaccacctaccaatattactttataaatattttatttgat 9827881  T
Q  195 ata 197  Q
    |||    
T  9827882 ata 9827884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 33271630 - 33271710
Alignment:
Q  117 aaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| ||||| ||||||| |||| |||||||||||||||||  || ||||||||||| |||||| ||||||||||||||    
T  33271630 aaggtaccaatgatatatatcattggccaattagagtgtgtcatctatcaatgttacttgataaatgctttatttgatata 33271710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 37881189 - 37881237
Alignment:
Q  149 agagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  37881189 agagtgtgccacataccaatgttactttataaatattttatttgatata 37881237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 35341531 - 35341632
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||||||||||||||||| ||||| ||||||  |||||||||||| |||||| ||| |||||||||||||||||||||  |||||||||||    
T  35341531 ggattccacttgtgtaccattaaggtaccaatgatatataccattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgata 35341630  T
Q  196 ta 197  Q
    ||    
T  35341631 ta 35341632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 48250156 - 48250249
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 196  Q
    |||||||||||||||||||| ||||| ||||||| ||||  ||||||||||||| ||| |||||||||||||||||| || |||||||||||||    
T  48250156 acttgtgtaccattaaggtaccaatgatatatatcattggtcaattagagtgtgccacctaccaatgttactttatagatgctttatttgatat 48250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 31307041 - 31306951
Alignment:
Q  105 ttgtgtaccattaaggtatcaatggtatatattattgaccaatt-agagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    |||||||||||||| ||||||||| ||||||| |||| |||||| | ||||||  || ||||||||||||||||||||| |||||||||||    
T  31307041 ttgtgtaccattaaagtatcaatgatatatatcattgtccaatttaaagtgtgctacctaccaatgttactttataaatgctttatttgat 31306951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 32694697 - 32694574
Alignment:
Q  145 aattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatgg 244  Q
    |||||||||||  ||  || |||||||||||||||||||||||||||||||||        |||||||||| ||  | || |||| ||||| ||||||||    
T  32694697 aattagagtgtcccatctatcaatgttactttataaattctttatttgatata-tttttttaaagggtgtgccacgtgacacattctaattaggcaatgg 32694599  T
Q  245 tataaaccattatagtacgcaagtg 269  Q
    |||| ||||||||||||| ||||||    
T  32694598 tatataccattatagtacacaagtg 32694574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 40856394 - 40856456
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttacc 165  Q
    |||| |||| ||||||||||  |||| ||||||||||||| ||||||||||||||||| ||||    
T  40856394 acttatgtatcattaaggtactaatgatatatattattgatcaattagagtgtgtcacctacc 40856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 48072385 - 48072554
Alignment:
Q  97 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 196  Q
    ||||| |||||||||| ||||||||| |||| |||||    ||||| ||||||||||||| ||| |  |||||||| |||||||||  |||||||||| |    
T  48072385 gattccacttgtgtactattaaggtaccaatagtatacc--attgatcaattagagtgtgccacatttcaatgttattttataaatattttatttgatgt 48072482  T
Q  197 annnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
    |        |||||||||| ||  |  | |||| |||||||||||||||||| |||||||| |||| ||||||    
T  48072483 a-tttttttaaagggtgtgccacgtggcacattctaattgggcaatggtatataccattatggtacacaagtg 48072554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 40893211 - 40893116
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattc-tttatttgatata 197  Q
    |||||| |||||| || |||| |||||||||||  ||||  |||||||| ||| |||  || |||||||||||||||||| | |||||||||||||    
T  40893211 acttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgatata 40893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 32676129 - 32676232
Alignment:
Q  94 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 193  Q
    |||||||| |||||||||||||||||||| ||||||||||||  |||| ||||||||| ||   ||| ||||||||||||||||||||| ||||||||||    
T  32676129 atggattccacttgtgtaccattaaggtaccaatggtatataccattggccaattagaatgcaccacctaccaatgttactttataaatgctttatttga 32676228  T
Q  194 tata 197  Q
    ||||    
T  32676229 tata 32676232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 8809809 - 8809715
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  8809809 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacgtaccaatgttactttataaatgttttatttgatata 8809715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 2569039 - 2569133
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||    
T  2569039 acttgtgtaccattaaggtaccaatggtatatatcatttgccaattagagtgtgccacctaccaatgttacattaccaatgctttatttgatata 2569133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 25161304 - 25161402
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    |||||| |||||||||||||||| || |||||||||||||  |||||||||||| |||||| ||| || ||||||||||||||||||  ||||||||||    
T  25161304 ggattccacttgtgtaccattaaagtctcaatggtatataccattgaccaattacagtgtgccacctaacaatgttactttataaatgttttatttgat 25161402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 29119493 - 29119399
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||| || || |||||||||||| || ||||||||||||||    
T  29119493 acttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctatcattgttactttatagatgctttatttgatata 29119399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 6223053 - 6223147
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||| ||||||||| ||||||| ||||| ||||||  ||||||||  || |||||||| ||||||| |  |||||||||||||    
T  6223053 acttgtgtaccattaaagtatcaatgttatatatcattgatcaattaaggtgtgtcatatatcaatgttattttataagtattttatttgatata 6223147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 7214578 - 7214501
Alignment:
Q  105 ttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaat 182  Q
    ||||||||||||||||||  ||| |||||||||||||  ||||||||||||||||| || | || |||||||||||||    
T  7214578 ttgtgtaccattaaggtactaatagtatatattattggtcaattagagtgtgtcacctatcgatattactttataaat 7214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 8462124 - 8462224
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||||||  ||||| ||| ||||||||||||| ||||| |||||| |||||| ||| ||||||||||| |||||||||  ||||||| |||    
T  8462124 ggattccacttgtgtat-attaaagtaccaatggtatatatcattgatcaattatagtgtgccacctaccaatgttattttataaatgttttatttaata 8462222  T
Q  196 ta 197  Q
    ||    
T  8462223 ta 8462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 46435622 - 46435470
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||| |||||            ||||||| || ||||||||||||||         
T  46435622 acttgtgtaccattaaggtaccaatggtatatacaattggccaattagagtgcgtcac------------ctttatagatgctttatttgatata-tatt 46435536  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagt 268  Q
       ||||||||||||| || || |||| |||||||||||||||||| |||||||| |||| |||||    
T  46435535 tttaaagggtgtgtcacatgacacattctaattgggcaatggtatataccattatggtacacaagt 46435470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 3688980 - 3688917
Alignment:
Q  130 tatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 193  Q
    ||||||| ||||||||||||||||||   || |||||||||||||||||||||  |||||||||    
T  3688980 tatatatcattgaccaattagagtgtacaacctaccaatgttactttataaatgttttatttga 3688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 35998254 - 35998348
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| ||||||||||||| ||||| ||||||  |||||  ||| |||||||| ||| || |||||||| ||||||| |  ||||||| |||||    
T  35998254 acttgtataccattaaggtaccaatgttatataacattgattaataagagtgtgccacatatcaatgttattttataagtgttttattttatata 35998348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 16679867 - 16679811
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcac 160  Q
    |||||||||||||||||||| ||||| |||||| ||||| ||||||||  ||||||||    
T  16679867 acttgtgtaccattaaggtaccaatgttatatactattg-ccaattaggatgtgtcac 16679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 8555470 - 8555522
Alignment:
Q  142 accaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    |||||||| | |||||||| ||||||||||| |||||||||  ||||||||||    
T  8555470 accaattaaaatgtgtcacataccaatgttattttataaatgttttatttgat 8555522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 34245569 - 34245663
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||||||||||| |||| ||||||  |||||||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  34245569 acttgtgtaccattaaggtattaatgttatataacattgaccaataaaagtgtgccacgtaccaatgttactttataaatactttatttgatata 34245663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 269
Target Start/End: Complemental strand, 5404045 - 5403880
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    ||||||||||||||||||||  |||||||||||||||||  || ||||||| || ||| |||||||||||||||||| ||  |||||||||||||         
T  5404045 acttgtgtaccattaaggtactaatggtatatattattggtcagttagagtctgccacctaccaatgttactttatagatgttttatttgatata-tttt 5403947  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
       |||||| || ||| || || |||| ||||||| |||||||||| |||||||| |||| ||||||    
T  5403946 tttaaagggcgtatcacatgacacattctaattggacaatggtatataccattatggtacacaagtg 5403880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 11113558 - 11113649
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 194  Q
    |||||||||||||||||||| ||||| ||||||  |||||| ||| |||||||||||| ||| ||||||||||| ||| | |||||||||||    
T  11113558 acttgtgtaccattaaggtaccaatgctatataacattgactaataagagtgtgtcacatactaatgttactttgtaagtgctttatttgat 11113649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 271
Target Start/End: Complemental strand, 1212013 - 1211846
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    |||||||||||||||||||| ||||||||||||  |||| | |||||| ||||| ||| |  ||||||||||||||  || ||||||||||||||         
T  1212013 acttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatata-tttt 1211915  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtgat 271  Q
       |||||||||| ||  |  | |||| |||| ||||||||||||| |||||||| |||| ||||||||    
T  1211914 tttaaagggtgtgccacgtggcacattctaatggggcaatggtatataccattatggtacacaagtgat 1211846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 32645014 - 32644912
Alignment:
Q  94 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 193  Q
    |||||||| || |||||||||||||| |||| || |||||||| |||| |||||||  ||||||||| ||| |||||||||||| |||| |||||||||     
T  32645014 atggattccacctgtgtaccattaagatatcgatagtatatatcattggccaattaaggtgtgtcacctacaaatgttacttta-aaatactttatttgt 32644916  T
Q  194 tata 197  Q
    ||||    
T  32644915 tata 32644912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 11753169 - 11753221
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgt 155  Q
    |||||||||||||||||||| ||||||||||||  || | |||||||||||||    
T  11753169 acttgtgtaccattaaggtaccaatggtatataccatcggccaattagagtgt 11753221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 18168392 - 18168481
Alignment:
Q  108 tgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||||||||||| ||||||||||||||    
T  18168392 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatata 18168481  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 18631949 - 18632038
Alignment:
Q  108 tgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||||||||||| ||||||||||||||    
T  18631949 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatata 18632038  T

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Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 41179739 - 41179638
Alignment:
Q  96 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 195  Q
    |||||| |||||||||||||||||||| ||||| ||||||| |||| ||||||| |||||||||| |||| ||||||||||||||||  ||||||| |||    
T  41179739 ggattccacttgtgtaccattaaggtaccaatgatatatatcattggccaattaaagtgtgtcacctaccgatgttactttataaatgttttatttaata 41179640  T
Q  196 ta 197  Q
    ||    
T  41179639 ta 41179638  T

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Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 269
Target Start/End: Complemental strand, 24337999 - 24337834
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 202  Q
    |||||||||| ||||||||| ||||||||||||  || |  ||||||||||||| ||  |||||||||||||||||| || ||||||||||||||         
T  24337999 acttgtgtactattaaggtagcaatggtatataccatcggtcaattagagtgtgccatctaccaatgttactttatagatgctttatttgatata-tatt 24337901  T
Q  203 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaagtg 269  Q
       |||||||||| || ||| | |||| ||||||| |||||||||| |||||||| |||| ||||||    
T  24337900 tttaaagggtgtgccacatagcacattctaattggacaatggtatataccattatggtacacaagtg 24337834  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 1514805 - 1514899
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||| ||||||  ||||| |||| |||||||  ||| |||||||||||||||||||||  |||||||||||||    
T  1514805 acttgtgtaccattaaggtaccaatgttatataacattgatcaataagagtgtaccacataccaatgttactttataaatgttttatttgatata 1514899  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 4708470 - 4708382
Alignment:
Q  109 gtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| ||||||| |||||| |||||| ||   ||||||| |||||||||| |||||||||||||||||||||  |||||||||||||    
T  4708470 gtaccactaaggtaccaatggcatatatcatgcgccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 4708382  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 11254202 - 11254103
Alignment:
Q  97 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 196  Q
    ||||| ||||||||||||||||  || ||||| ||||||| |||||||| ||| ||| |  ||| |||||||||||||||||||||  ||||||||||||    
T  11254202 gattccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatat 11254104  T

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Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 32826004 - 32825910
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||| ||||||||| | ||||  |||| ||||||||||| |||||| || |||||||| ||||||  |  |||||||||||||    
T  32826004 acttgtgtaccattaaagtatcaatgttgtataccattggccaattagagtatgtcacatatcaatgttattttatatgtgttttatttgatata 32825910  T

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Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 13175 - 13081
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||||||||||||||||| ||||||||||||  |||| | |||||| ||||| ||| |  ||||||||||||||  || ||||||||||||||    
T  13175 acttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatata 13081  T

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Target: scaffold0519 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 11191 - 11290
Alignment:
Q  97 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 196  Q
    ||||| ||||||||||||||||  || ||||| ||||||| |||||||| ||| ||| |  ||| |||||||||||||||||||||  ||||||||||||    
T  11191 gattccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatat 11289  T

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Target: scaffold0263 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 23240 - 23174
Alignment:
Q  131 atatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 197  Q
    |||||| |||| |||||||||||||| ||| ||||||| |||||||||||||  |||||||||||||    
T  23240 atatatcattggccaattagagtgtgccacctaccaattttactttataaatattttatttgatata 23174  T

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Target: scaffold0263; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 23095 - 23152
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcac 160  Q
    ||||||||| |||||||||| |||||||||||| ||||| |||||||| || ||||||    
T  23095 acttgtgtatcattaaggtaccaatggtatatactattggccaattagggtctgtcac 23152  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 73073 - 73168
Alignment:
Q  103 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattc-tttatttgatata 197  Q
    |||||| |||||| || |||| |||||||||||  ||||  |||||||| ||| |||  || |||||||||||||||||| | |||||||||||||    
T  73073 acttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgatata 73168  T

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