View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3767_low_29 (Length: 247)
Name: NF3767_low_29
Description: NF3767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3767_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 44222060 - 44222298
Alignment:
| Q |
1 |
aattatagtagtattgtattagtcaactttaatctttgaaattttcaacgtgagagcgatgagataaacatgaggata-------------cacattatt |
87 |
Q |
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| T |
44222060 |
aattatagtagtattgtattagtcaactttaatctttgaaattttcatcgtgagagcgatgagataaatatgaggatatagtgctttaagacacattatt |
44222159 |
T |
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| Q |
88 |
ttaatttgtaccatggtcacttgaatctgtttaattgatttgaaattggctatagggtggcatggaaatgtggcacaagggaatcagggagtagccatgg |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44222160 |
ttaatttgtaccatggtcacttgaatctgtttaattgatttgaaattggctatagggtggcatggaaatgtggcacaagggaatcagggagtagccatgg |
44222259 |
T |
|
| Q |
188 |
caccaacagctccagcagttgaacacatgactcgttgaa |
226 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
44222260 |
caccaacagctccagcagttgaacacatgactcgttgaa |
44222298 |
T |
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