View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_high_161 (Length: 245)

Name: NF3772_high_161
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_high_161
NF3772_high_161
[»] chr3 (49 HSPs)
chr3 (1-243)||(43472761-43473005)
chr3 (1-235)||(2358415-2358650)
chr3 (1-243)||(47302143-47302385)
chr3 (2-243)||(50716375-50716618)
chr3 (2-243)||(50796229-50796472)
chr3 (5-243)||(3902603-3902842)
chr3 (2-243)||(34821137-34821379)
chr3 (6-231)||(51258538-51258765)
chr3 (2-243)||(35142197-35142438)
chr3 (2-243)||(3351860-3352102)
chr3 (14-243)||(52777354-52777583)
chr3 (2-218)||(46622589-46622806)
chr3 (2-243)||(28873128-28873371)
chr3 (6-231)||(38977546-38977772)
chr3 (13-191)||(3938357-3938536)
chr3 (2-231)||(39149944-39150167)
chr3 (4-243)||(47739729-47739968)
chr3 (3-229)||(35345704-35345931)
chr3 (54-231)||(49096072-49096251)
chr3 (2-243)||(51540421-51540650)
chr3 (70-243)||(47123149-47123323)
chr3 (70-243)||(47130515-47130689)
chr3 (2-131)||(4394214-4394344)
chr3 (53-207)||(30721655-30721810)
chr3 (98-242)||(501032-501176)
chr3 (81-242)||(51492923-51493085)
chr3 (81-223)||(46624863-46625005)
chr3 (90-231)||(5127782-5127923)
chr3 (2-164)||(33439383-33439552)
chr3 (2-193)||(40062552-40062745)
chr3 (2-223)||(29048486-29048695)
chr3 (81-196)||(4300154-4300269)
chr3 (156-243)||(33438644-33438731)
chr3 (2-232)||(14828710-14828944)
chr3 (182-243)||(3937502-3937563)
chr3 (2-76)||(41300901-41300975)
chr3 (2-56)||(500980-501034)
chr3 (2-193)||(34009888-34010075)
chr3 (85-223)||(54229775-54229913)
chr3 (176-229)||(8735530-8735583)
chr3 (176-229)||(9087771-9087824)
chr3 (9-165)||(51816415-51816572)
chr3 (141-232)||(29035933-29036024)
chr3 (9-76)||(45711886-45711952)
chr3 (174-229)||(47979973-47980028)
chr3 (179-229)||(45244527-45244577)
chr3 (174-231)||(33842041-33842098)
chr3 (1-41)||(26465078-26465118)
chr3 (2-58)||(45244606-45244661)
[»] chr1 (41 HSPs)
chr1 (1-241)||(18583337-18583578)
chr1 (5-243)||(23442861-23443100)
chr1 (1-243)||(33611203-33611446)
chr1 (1-243)||(41584458-41584701)
chr1 (1-243)||(49786391-49786634)
chr1 (2-243)||(45046644-45046886)
chr1 (6-243)||(52744641-52744879)
chr1 (2-243)||(42546090-42546332)
chr1 (2-243)||(40907728-40907970)
chr1 (6-223)||(34006403-34006622)
chr1 (42-243)||(45567724-45567926)
chr1 (3-232)||(7011344-7011575)
chr1 (6-231)||(28866428-28866654)
chr1 (6-231)||(27794966-27795191)
chr1 (2-223)||(6223547-6223762)
chr1 (64-232)||(49677617-49677786)
chr1 (44-230)||(26723324-26723511)
chr1 (81-243)||(17000501-17000664)
chr1 (2-208)||(38885371-38885578)
chr1 (5-231)||(44572897-44573121)
chr1 (6-231)||(24472626-24472851)
chr1 (52-231)||(15069686-15069865)
chr1 (81-243)||(34162595-34162758)
chr1 (81-223)||(40650549-40650691)
chr1 (66-229)||(25563272-25563436)
chr1 (153-243)||(32817557-32817647)
chr1 (6-229)||(3561133-3561357)
chr1 (85-219)||(42929031-42929165)
chr1 (198-243)||(32542516-32542561)
chr1 (176-229)||(43318949-43319002)
chr1 (90-153)||(890738-890801)
chr1 (1-50)||(41584374-41584423)
chr1 (2-58)||(800687-800742)
chr1 (6-58)||(9445987-9446038)
chr1 (174-232)||(9445853-9445911)
chr1 (2-40)||(49677790-49677828)
chr1 (174-231)||(8364143-8364199)
chr1 (174-230)||(800559-800615)
chr1 (6-50)||(27400079-27400123)
chr1 (2-58)||(43319079-43319134)
chr1 (81-193)||(45879983-45880095)
[»] chr7 (42 HSPs)
chr7 (1-235)||(31643172-31643406)
chr7 (1-243)||(8155022-8155265)
chr7 (1-243)||(47202617-47202853)
chr7 (2-243)||(9151919-9152156)
chr7 (2-243)||(19818503-19818744)
chr7 (5-243)||(42864898-42865138)
chr7 (2-243)||(42925434-42925677)
chr7 (1-243)||(3304544-3304794)
chr7 (2-243)||(19225392-19225634)
chr7 (2-211)||(43737237-43737447)
chr7 (6-243)||(36468337-36468573)
chr7 (2-208)||(36629361-36629568)
chr7 (1-242)||(33573841-33574078)
chr7 (14-243)||(33151331-33151555)
chr7 (60-243)||(36408494-36408678)
chr7 (2-159)||(37518057-37518215)
chr7 (81-231)||(3936243-3936393)
chr7 (5-223)||(24690133-24690350)
chr7 (5-231)||(31985314-31985541)
chr7 (1-196)||(7115062-7115259)
chr7 (2-223)||(36946086-36946307)
chr7 (115-243)||(28230376-28230504)
chr7 (81-231)||(1518842-1518992)
chr7 (2-243)||(24041991-24042224)
chr7 (63-163)||(26555012-26555113)
chr7 (6-232)||(6466935-6467165)
chr7 (129-229)||(5278401-5278501)
chr7 (6-193)||(37398685-37398877)
chr7 (2-116)||(43186031-43186150)
chr7 (2-83)||(28230286-28230367)
chr7 (147-232)||(37518235-37518320)
chr7 (6-58)||(16278322-16278374)
chr7 (174-229)||(8214257-8214312)
chr7 (174-229)||(8214468-8214523)
chr7 (85-192)||(39581913-39582020)
chr7 (81-140)||(47239563-47239622)
chr7 (176-231)||(48775743-48775798)
chr7 (174-232)||(5730943-5731001)
chr7 (2-56)||(8214388-8214442)
chr7 (2-36)||(36408694-36408728)
chr7 (2-43)||(26554957-26554998)
chr7 (2-58)||(5731073-5731128)
[»] chr4 (52 HSPs)
chr4 (1-235)||(6228606-6228841)
chr4 (1-243)||(32441941-32442184)
chr4 (1-235)||(34973003-34973238)
chr4 (2-243)||(25491189-25491431)
chr4 (2-243)||(40703795-40704037)
chr4 (1-243)||(19835651-19835894)
chr4 (1-235)||(49397147-49397385)
chr4 (2-201)||(54631286-54631486)
chr4 (2-243)||(17932931-17933173)
chr4 (5-241)||(6003470-6003707)
chr4 (6-243)||(53893824-53894061)
chr4 (2-242)||(25752237-25752479)
chr4 (2-243)||(48318858-48319100)
chr4 (2-242)||(7931789-7932029)
chr4 (5-231)||(2505828-2506055)
chr4 (19-243)||(52089316-52089541)
chr4 (6-243)||(46440070-46440310)
chr4 (6-231)||(8106536-8106763)
chr4 (2-241)||(38536303-38536544)
chr4 (1-231)||(27741906-27742138)
chr4 (72-243)||(41412962-41413134)
chr4 (2-243)||(25538772-25539015)
chr4 (2-243)||(31582224-31582458)
chr4 (2-170)||(29822784-29822953)
chr4 (11-232)||(41322895-41323117)
chr4 (2-243)||(3703049-3703285)
chr4 (2-131)||(18050983-18051113)
chr4 (6-145)||(38417021-38417160)
chr4 (6-163)||(49001353-49001516)
chr4 (81-243)||(55052492-55052655)
chr4 (2-193)||(47456781-47456978)
chr4 (2-83)||(52089546-52089627)
chr4 (6-229)||(14474013-14474233)
chr4 (98-241)||(7863574-7863717)
chr4 (7-170)||(372125-372289)
chr4 (1-83)||(23524079-23524161)
chr4 (143-231)||(47873953-47874041)
chr4 (2-157)||(5803222-5803382)
chr4 (174-229)||(25140473-25140528)
chr4 (6-154)||(4936520-4936675)
chr4 (2-58)||(25140603-25140658)
chr4 (3-165)||(37222170-37222336)
chr4 (81-193)||(55838866-55838978)
chr4 (2-76)||(20083269-20083343)
chr4 (179-229)||(25140894-25140944)
chr4 (175-243)||(49002822-49002890)
chr4 (179-229)||(25140687-25140737)
chr4 (210-243)||(23524038-23524071)
chr4 (174-231)||(27181488-27181544)
chr4 (130-243)||(27879679-27879792)
chr4 (2-165)||(48095656-48095825)
chr4 (2-51)||(48629360-48629409)
[»] chr2 (39 HSPs)
chr2 (2-243)||(42894500-42894742)
chr2 (5-242)||(25217566-25217805)
chr2 (6-232)||(41510222-41510448)
chr2 (2-243)||(34517224-34517468)
chr2 (2-242)||(33452231-33452473)
chr2 (55-223)||(32187711-32187880)
chr2 (2-243)||(5507542-5507785)
chr2 (2-211)||(41854692-41854903)
chr2 (1-219)||(38308620-38308840)
chr2 (2-243)||(44465529-44465758)
chr2 (6-243)||(39447285-39447518)
chr2 (55-223)||(16750271-16750439)
chr2 (6-231)||(41202982-41203205)
chr2 (6-232)||(15994912-15995133)
chr2 (46-232)||(36875119-36875305)
chr2 (115-243)||(36948848-36948976)
chr2 (6-211)||(30763804-30764011)
chr2 (2-231)||(17474587-17474818)
chr2 (2-139)||(27670723-27670861)
chr2 (35-223)||(19109835-19110026)
chr2 (6-165)||(38065370-38065530)
chr2 (129-231)||(45153708-45153810)
chr2 (28-193)||(42478916-42479082)
chr2 (7-193)||(26228239-26228431)
chr2 (6-223)||(35251073-35251293)
chr2 (108-243)||(8388774-8388909)
chr2 (85-193)||(45293813-45293921)
chr2 (5-223)||(32069031-32069249)
chr2 (2-229)||(33440299-33440526)
chr2 (14-223)||(37773616-37773827)
chr2 (174-229)||(17766791-17766846)
chr2 (178-232)||(9847386-9847440)
chr2 (6-116)||(12885295-12885410)
chr2 (176-229)||(34519501-34519554)
chr2 (90-170)||(13704690-13704770)
chr2 (2-40)||(32187673-32187711)
chr2 (176-229)||(9847176-9847229)
chr2 (6-58)||(17133034-17133086)
chr2 (2-58)||(25715770-25715825)
[»] chr5 (53 HSPs)
chr5 (1-242)||(12464911-12465154)
chr5 (2-232)||(39524872-39525103)
chr5 (2-243)||(20891698-20891939)
chr5 (2-232)||(37183575-37183806)
chr5 (2-232)||(6156827-6157058)
chr5 (6-231)||(31928923-31929148)
chr5 (2-223)||(14111972-14112192)
chr5 (6-232)||(15957845-15958072)
chr5 (2-231)||(28083170-28083402)
chr5 (5-243)||(38692579-38692819)
chr5 (5-243)||(38871756-38871995)
chr5 (6-231)||(31221137-31221363)
chr5 (2-231)||(32841765-32841995)
chr5 (2-243)||(33487695-33487938)
chr5 (1-232)||(7884289-7884522)
chr5 (2-232)||(40619779-40620015)
chr5 (2-243)||(15799310-15799552)
chr5 (1-231)||(27212806-27213031)
chr5 (1-150)||(26190115-26190265)
chr5 (6-194)||(26898601-26898790)
chr5 (2-242)||(38372395-38372628)
chr5 (30-232)||(24203505-24203709)
chr5 (81-243)||(4064593-4064756)
chr5 (81-243)||(29862697-29862860)
chr5 (84-243)||(12847528-12847687)
chr5 (98-231)||(13908645-13908778)
chr5 (81-229)||(23269436-23269584)
chr5 (71-232)||(26095188-26095350)
chr5 (2-229)||(27158183-27158411)
chr5 (85-229)||(6800805-6800949)
chr5 (47-229)||(40613514-40613697)
chr5 (2-164)||(26093620-26093786)
chr5 (174-229)||(8738952-8739007)
chr5 (177-232)||(27494123-27494178)
chr5 (173-243)||(26190264-26190334)
chr5 (5-58)||(8739079-8739132)
chr5 (1-229)||(21070465-21070693)
chr5 (81-140)||(26622298-26622357)
chr5 (87-193)||(33901094-33901200)
chr5 (174-229)||(8739155-8739210)
chr5 (177-228)||(27493919-27493970)
chr5 (174-229)||(28445176-28445231)
chr5 (185-243)||(25747110-25747168)
chr5 (160-229)||(16429381-16429450)
chr5 (176-229)||(34530314-34530367)
chr5 (6-58)||(5456327-5456379)
chr5 (6-58)||(16429250-16429302)
chr5 (174-229)||(8973576-8973631)
chr5 (6-116)||(31561656-31561767)
chr5 (179-229)||(4650194-4650244)
chr5 (183-229)||(28445381-28445427)
chr5 (179-229)||(38641033-38641083)
chr5 (2-58)||(43387954-43388009)
[»] chr8 (42 HSPs)
chr8 (1-243)||(31519687-31519928)
chr8 (2-243)||(8885246-8885489)
chr8 (1-243)||(28916898-28917141)
chr8 (2-231)||(42280685-42280915)
chr8 (2-232)||(11698110-11698341)
chr8 (2-243)||(34853451-34853693)
chr8 (6-243)||(3094808-3095046)
chr8 (9-232)||(40328031-40328256)
chr8 (2-243)||(14163851-14164093)
chr8 (54-243)||(27927787-27927977)
chr8 (56-242)||(9073628-9073815)
chr8 (5-243)||(44106346-44106585)
chr8 (56-235)||(21004515-21004695)
chr8 (6-243)||(17119678-17119915)
chr8 (52-231)||(36165681-36165862)
chr8 (2-229)||(36980706-36980934)
chr8 (87-243)||(40392659-40392815)
chr8 (5-223)||(6395227-6395446)
chr8 (1-223)||(34645520-34645744)
chr8 (2-224)||(36317938-36318161)
chr8 (3-232)||(28423555-28423785)
chr8 (174-243)||(16310722-16310791)
chr8 (99-231)||(1076690-1076822)
chr8 (175-243)||(40994915-40994983)
chr8 (98-243)||(4259528-4259671)
chr8 (2-136)||(10840547-10840687)
chr8 (174-243)||(37248681-37248750)
chr8 (2-229)||(7981651-7981881)
chr8 (175-229)||(31234486-31234540)
chr8 (174-229)||(9845323-9845378)
chr8 (174-229)||(33472208-33472263)
chr8 (160-229)||(10833468-10833537)
chr8 (176-229)||(33472415-33472468)
chr8 (90-223)||(1374083-1374216)
chr8 (179-223)||(24627717-24627761)
chr8 (5-40)||(4259479-4259514)
chr8 (174-229)||(7982515-7982570)
chr8 (2-57)||(40994980-40995035)
chr8 (179-229)||(41530812-41530862)
chr8 (98-163)||(8621528-8621593)
chr8 (1-58)||(41530891-41530947)
chr8 (6-58)||(33472286-33472338)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-231)||(140620-140844)
[»] chr6 (30 HSPs)
chr6 (2-243)||(4508096-4508338)
chr6 (5-229)||(2539588-2539813)
chr6 (2-233)||(21514825-21515057)
chr6 (6-232)||(2813020-2813250)
chr6 (3-232)||(3717077-3717308)
chr6 (2-243)||(5638985-5639226)
chr6 (1-241)||(14587354-14587594)
chr6 (6-243)||(17264533-17264770)
chr6 (3-243)||(24604156-24604397)
chr6 (72-232)||(5699699-5699861)
chr6 (8-243)||(29519402-29519634)
chr6 (89-231)||(9905249-9905392)
chr6 (81-243)||(23406919-23407082)
chr6 (110-211)||(32044537-32044638)
chr6 (100-241)||(1945423-1945564)
chr6 (81-232)||(13800901-13801052)
chr6 (88-229)||(34528577-34528718)
chr6 (102-232)||(7734221-7734351)
chr6 (46-149)||(7412967-7413071)
chr6 (79-229)||(29289497-29289647)
chr6 (2-75)||(237090-237163)
chr6 (2-225)||(16450355-16450583)
chr6 (74-225)||(6703994-6704144)
chr6 (2-170)||(14037759-14037928)
chr6 (2-63)||(5699897-5699963)
chr6 (2-40)||(9905390-9905428)
chr6 (3-40)||(1945377-1945414)
chr6 (206-243)||(32035231-32035268)
chr6 (85-129)||(33413364-33413408)
chr6 (178-229)||(17501003-17501054)
[»] scaffold0508 (1 HSPs)
scaffold0508 (2-232)||(3187-3420)
[»] scaffold0137 (1 HSPs)
scaffold0137 (2-228)||(9292-9518)
[»] scaffold0027 (2 HSPs)
scaffold0027 (68-243)||(141824-141999)
scaffold0027 (2-43)||(141788-141829)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-131)||(174155-174283)
[»] scaffold0182 (2 HSPs)
scaffold0182 (174-230)||(23238-23294)
scaffold0182 (2-40)||(23300-23338)
[»] scaffold0564 (1 HSPs)
scaffold0564 (6-158)||(4579-4732)
[»] scaffold0400 (1 HSPs)
scaffold0400 (70-134)||(9395-9459)
[»] scaffold0365 (1 HSPs)
scaffold0365 (70-134)||(10038-10102)
[»] scaffold0006 (2 HSPs)
scaffold0006 (175-231)||(59495-59551)
scaffold0006 (102-229)||(59865-59992)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 43472761 - 43473005
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct--ggggaagttttag 98  Q
    |||||||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||||||||||||||||||||||||| |  |||||||||| ||    
T  43472761 aatggaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtccttgaattttttctgatttttttggggaagtttcag 43472860  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| |    
T  43472861 agtaatccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgacccaaaacaaaaggataagagttaggaagattaatattgtcc 43472960  T
Q  199 ctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
     ||||||| |||||||||||||||||||||||||||| |||||||    
T  43472961 ttaaaatggctatacatgttacaaatatgtttaggatttgtgctg 43473005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 2358415 - 2358650
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    ||||||||||| |||||||||||||| | ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||    
T  2358415 aatggaattttagattttgaggggcgtagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttttggggaagtttcaga 2358514  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||| ||||||||||| || ||||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  2358515 gcaattcgatcaagtagcccaaaaacccgatttttgactaagaatatgcaacaatgacccaaaacaaaaggataagagttaggaagattaatattgtccc 2358614  T
Q  200 taaaatgactatacatgttacaaatatgtttaggat 235  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2358615 taaaatggctatacatgttacaaatatgtttaggat 2358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 47302385 - 47302143
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct--ggggaagttttag 98  Q
    ||||||||||||||||||||||||| || ||||||||||| | ||||||| |||||||||| ||||||||||||||||||||| |  ||| |||||| ||    
T  47302385 aatggaattttggattttgaggggcagagtcccgtaagaagtcccttctatgggagtcatgatccttgaattttttctgatttttttgggaaagtttcag 47302286  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    | |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||||||| ||    
T  47302285 aacaatccgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagtta-gaatattaatattg-tc 47302188  T
Q  199 ctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  47302187 ctaaaatggctatacatgttacaaatatgtttaggatttgtgctg 47302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 50716618 - 50716375
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||||||| ||||||||||||| ||||||||||||  |||    
T  50716618 atggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtttcggag 50716519  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||  || |   ||||||||||||||||||||||| ||    
T  50716518 caatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaaacggaatgatgagagttaggaagattaatattgtccc 50716419  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  50716418 taaaatgactattcatgttacaaacatgtttagaatttgtgctg 50716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 50796229 - 50796472
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||||||| ||||||||||||| ||||||||||||  |||    
T  50796229 atggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtttcggag 50796328  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||  || |   ||||||||||||||||||||||| ||    
T  50796329 caatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaaacggaatgatgagagttaggaagattaatattgtccc 50796428  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  50796429 taaaatgactattcatgttacaaacatgtttagaatttgtgctg 50796472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 3902603 - 3902842
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaa 103  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||  ||||||    
T  3902603 gaattttggattttgaggggcggagtcccgtaagaaattccttctaagggtgtcatggtccttgaattttttctgattttctgggcaagtttccgagcaa 3902702  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| || ||||   ||||||| ||||||||||||||| | ||||    
T  3902703 tccgatcaagtaatctgaaaacccgatttttgactaagaacatgtaacaatgacccaaagcagaaggatgagagttatgaagattaatattgtccataaa 3902802  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||  || ||||||||||| |||||||| || |||||||    
T  3902803 atgatcatccatgttacaaacatgtttagaatttgtgctg 3902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 34821137 - 34821379
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  34821137 atggaattttggattttgaggggcggactcccgtaagaagtcccttctatgagagtcatggtccttgaattttttctgattttctggggaagtttcagag 34821236  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    | |||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||| ||||   | | ||||||||||||||||||| | |    
T  34821237 cgatccgatcaagtagcctgaaaacccgctttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaatttaggaagattaatattgtccat 34821336  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||  |||||||||| |||||||| || |||||||    
T  34821337 aaaatgactatctatgttacaaacatgtttagaatttgtgctg 34821379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 51258765 - 51258538
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||    
T  51258765 aattttggattttgaggggcggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctgggaaagtttcggagcaat 51258666  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-cctaaa 203  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||   ||||||| |||||||||||||||| ||||||    
T  51258665 ccgatcaagttgtccgaaaactcgatttttgactaagaacatgtaacaatgactcaaaacaaaaggatgagagttatgaagattaatattgttccctaaa 51258566  T
Q  204 atgactatacatgttacaaatatgttta 231  Q
    |||||||| ||||||| ||| |||||||    
T  51258565 atgactatccatgttataaacatgttta 51258538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 35142438 - 35142197
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    ||||||||||||||||| |||||||||  |||||||||| | ||||||| ||||||||||||||||||||||||||||||||   |||||||||  ||||    
T  35142438 atggaattttggatttttaggggcggagccccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttctgggaagtttcggagc 35142339  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||| || ||||   |||||||||||||||||||||||   ||    
T  35142338 aatccgatcaagtagcccgaaaacccagtttttgactaagaacagataacaatgacccaaagcagaaggatgagagttaggaagattaatattgtcttta 35142239  T
Q  202 aaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| ||||||||||| |||||||| || |||||||    
T  35142238 aaatgactatccatgttacaaacatgtttagaatttgtgctg 35142197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 3351860 - 3352102
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||| |||||||||||||||| |||| |||||| | ||||||| ||||||||| |||| ||||||||||||||||| || |||||||||  |||    
T  3351860 atggaattttagattttgaggggcggagtcccataagaagtcccttctacgggagtcattgtccctgaattttttctgattttctagggaagtttcggag 3351959  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| | |||||||| |||||| ||||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||| |||    
T  3351960 caatccgatcaagtagcctgaaaaccctattttttactaagaaccggtaacaatgacccaaaacagaagaatgagagttaggaagattaatattgtccct 3352059  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| |||||||| || |||||||    
T  3352060 aaaatgactatccatgttacaaacatgtttagaatttgtgctg 3352102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 52777583 - 52777354
Alignment:
Q  14 attttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaatccgatcaa 112  Q
    ||||||| ||||||| ||||  ||||| | |||| |||||||| ||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  52777583 attttgaagggcggagtccca-aagaagtcccttttaagggagacatagtccttgaattttttctgattttttggggaagtttcagagcaatccgatcaa 52777485  T
Q  113 gtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactata 212  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||| |||||    
T  52777484 gtagcccgaaaacccgatttttgactaagaacatgtagcaatgacccaaaacaaaaggataagagttaagaagattaatattgtccctaaaatggctata 52777385  T
Q  213 catgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| |||||||| || |||||||    
T  52777384 catgttacaaacatgtttagaatttgtgctg 52777354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 46622589 - 46622806
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||  ||||| |||||| ||||||||||||||||||||||||| ||||| ||||||  |||    
T  46622589 atggaattttggattctgaggggcggagtcccgtaagaaattgattctatgggagtgatggtccttgaattttttctgattttctgggaaagtttcggag 46622688  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||    ||||| ||||||||||||||||| |||    
T  46622689 caatccgatcaagtagtccgaaaatccgatttttgactaagaacaagtaacaatgacccaaaacagaagaatgagagtaaggaagattaatattgtccct 46622788  T
Q  201 aaaatgactatacatgtt 218  Q
    ||||||||||| ||||||    
T  46622789 aaaatgactatccatgtt 46622806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 28873371 - 28873128
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |  |||||| |||||||||| |||||||||||||||| |||| ||||||||||||  |||    
T  28873371 atggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagtcatgttccttgaattttttctaattttctggggaagtttcggag 28873272  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |  |||    ||||||| ||||||||||||||| ||    
T  28873271 caatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacagtgacccaaaagcggaagaatgagagttaagaagattaatattgtccc 28873172  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||  |||||||||| |||||||| || |||||||    
T  28873171 taaaatgactatctatgttacaaacatgtttagaatttgtgctg 28873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 38977546 - 38977772
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||| |||||||||||||||||| |||| ||||||||||||| |||||||    
T  38977546 aattttggattttgaggggcggagtcccacaagaagtcccttctacgggagtcacggtccttgaattttttcttattttctggggaagttttggagcaat 38977645  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    ||||||||||||  ||||||| || ||||| |||||| ||||||||||||||||||||||| ||||   ||||||||||||||||||||||| | |||||    
T  38977646 ccgatcaagtagctcgaaaactcggtttttaactaaggacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccataaaa 38977745  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    ||||||| ||||||||||| |||||||    
T  38977746 tgactatccatgttacaaacatgttta 38977772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 3938536 - 3938357
Alignment:
Q  13 gattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaatccgatca 111  Q
    |||||||||||||||| ||  ||||||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  3938536 gattttgaggggcggagtcttgtaagaagttccttataagggagtcatggtccttgaattttttctgattttttggggaagtttcagagcaatccgatca 3938437  T
Q  112 agtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaat 191  Q
    ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3938436 agtaacccgaaaaccagatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaagattaat 3938357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 39150167 - 39149944
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||       |||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||    
T  39150167 atggaattttggattttgaggg-------cccgtaagaagtcccttctaaggaagtcatggtccttgaattttttctgattttctggggaagtttcggag 39150075  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||| ||| ||||||| ||||||||||| ||||| |||||||||| |||||| |||||||||||| ||||   ||||||||||| |||||||||||  ||    
T  39150074 caattcgaccaagtagcccgaaaacccggtttttaactaagaacatgtaacagtgacccaaaacagaaggatgagagttaggaaaattaatattgtctct 39149975  T
Q  201 aaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||   |||||||||| |||||||    
T  39149974 aaaatgactaccaatgttacaaacatgttta 39149944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 47739729 - 47739968
Alignment:
Q  4 ggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagca 102  Q
    ||||||||| ||||||||||||||| ||||  ||||| |  |||||| |||||||| ||| |||||||||||||| |||| ||||||||||||| |||||    
T  47739729 ggaattttgaattttgaggggcggagtccccaaagaagtctcttctatgggagtcacggttcttgaattttttctaattttctggggaagttttggagca 47739828  T
Q  103 atccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    |||||||||||||| |||||||||| |||||| ||||| | ||||||| ||||| |||||||| ||||   ||||||| ||||||||||||||| ||| |    
T  47739829 atccgatcaagtagcccgaaaacccaatttttaactaaaaccaggtaataatga-ccaaaacagaaggatgagagttatgaagattaatattgtccctta 47739927  T
Q  203 aatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||  |||||||||| |||||||| || |||||||    
T  47739928 aatgactatctatgttacaaacatgtttagaatttgtgctg 47739968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 35345704 - 35345931
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagc 101  Q
    |||||||||||||||||||||||||| |||||| |||| | ||||||| | ||||| || | ||||| ||| ||||||||| ||||||||||||  ||||    
T  35345704 tggaattttggattttgaggggcggagtcccgttagaagtcccttctacgagagtcttgatacttgattttcttctgattttctggggaagtttcggagc 35345803  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    ||||||||||| ||  |||||||||| |||||||||||||||||  ||||||||||  |||||||||||   |||||||| || ||||||||||| | ||    
T  35345804 aatccgatcaattaacccgaaaacccaatttttgactaagaacaactaacaatgacgaaaaacaaaaggatgagagttagaaatattaatattgtccata 35345903  T
Q  202 aaatgactatacatgttacaaatatgtt 229  Q
    |||||||||| ||||||||||| |||||    
T  35345904 aaatgactatccatgttacaaacatgtt 35345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 231
Target Start/End: Original strand, 49096072 - 49096251
Alignment:
Q  54 gagtcatggtccttgaattttttctga-tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaaca 152  Q
    |||||||| ||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  49096072 gagtcatgatccttgatttttttctgactttcgggggaagttttggagcaatccgatcaagtagcccgaaaactcgatttttgacgaagaacaggtaaca 49096171  T
Q  153 atgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-cctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||| ||||||| ||||   ||||||||||||||| |||||||| ||||||||||||||  |||||||||| |||||||    
T  49096172 atgactcaaaacagaaggatgagagttaggaagatttatattgttccctaaaatgactatctatgttacaaacatgttta 49096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 51540421 - 51540650
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagag 100  Q
    ||||| |||||||||||||||||| ||||||| | |||| | |||||||||||||||||||||||||||||||||| ||||| | ||||||||||  |||    
T  51540421 atggagttttggattttgaggggcagaatcccatgagaagtcccttctaagggagtcatggtccttgaattttttcggattttttggggaagtttcggag 51540520  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||             |||||||||||||||||||||||  ||||||||||||||||  | ||||   ||||||||||||||||||||||| |||    
T  51540521 caatccga-------------aaacccgatttttgactaagaacgtgtaacaatgacccaaaggagaaggatgagagttaggaagattaatattgtccct 51540607  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| || |||||||| |||||||| || |||||||    
T  51540608 aaaatgactatccaagttacaaacatgtttagaatttgtgctg 51540650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 47123323 - 47123149
Alignment:
Q  70 attttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaa 168  Q
    |||||||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  || ||||| |||||||||||||||||||| ||||||||| ||    
T  47123323 attttttctgattttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaa 47123224  T
Q  169 ggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||   ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||| || |||||||    
T  47123223 ggatgagagttaggaagattaatattgtccctaaaatgattatccatgttacaaacatgtttagaatttgtgctg 47123149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 47130689 - 47130515
Alignment:
Q  70 attttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaa 168  Q
    |||||||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  || ||||| |||||||||||||||||||| ||||||||| ||    
T  47130689 attttttctgattttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaa 47130590  T
Q  169 ggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||   ||||||||||||||||||||||| |||||||||| | | ||||||||||| |||||||| || |||||||    
T  47130589 ggatgagagttaggaagattaatattgtccctaaaatgattgtccatgttacaaacatgtttagaatttgtgctg 47130515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 4394344 - 4394214
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||||| ||| |||||||| ||||||  |||    
T  4394344 atggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctgggaaagtttcggag 4394245  T
Q  101 caatccgatcaagtagtccgaaaacccgatt 131  Q
    ||||| |||||||||||||||||| ||||||    
T  4394244 caatctgatcaagtagtccgaaaatccgatt 4394214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 207
Target Start/End: Original strand, 30721655 - 30721810
Alignment:
Q  53 ggagtcatggtccttgaatttt-ttctgatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaac 151  Q
    |||||||| ||| ||||||||| |||||||||   |||||||||  |||||||||||||||||||  ||||||||| |||||||||||| ||| |||| |    
T  30721655 ggagtcatagtcattgaatttttttctgattttctgggaagtttcggagcaatccgatcaagtagctcgaaaacccaatttttgactaataacgggtatc 30721754  T
Q  152 aatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatga 207  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| ||||||||||    
T  30721755 aatgacccaaaacagaaggataagagttaggaagattaatattgtccctaaaatga 30721810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 501032 - 501176
Alignment:
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt 197  Q
    ||||||||||||||||||| ||||||||  ||||||||| ||| |||| ||||||||||||||||||| ||||   |||| ||||||||||||||||||     
T  501032 gagcaatccgatcaagtagcccgaaaacatgatttttgaataaaaacatgtaacaatgacccaaaacagaaggatgagagctaggaagattaatattgtc 501131  T
Q  198 cctaaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    | |||||||||||| ||| ||||||| |||||||| || ||||||    
T  501132 cataaaatgactatccattttacaaacatgtttagaatttgtgct 501176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 242
Target Start/End: Complemental strand, 51493085 - 51492923
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttg-actaagaacaggtaacaatgacccaaaacaaaaggtaaagagtt 179  Q
    |||||||||||||||  |||||||| |||||||||| || ||||||| ||||||  ||||||||||| ||||||||||| |||||| ||||   ||||||    
T  51493085 tttctggggaagtttcggagcaatctgatcaagtaggccaaaaacccaatttttttactaagaacagctaacaatgaccaaaaacataaggatgagagtt 51492986  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||||||||||||| | |||||| ||||| ||| ||||||| ||| |||| || ||||||    
T  51492985 aggaagattaatattgtccataaaataactattcatattacaaacatgattagaatttgtgct 51492923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 46625005 - 46624863
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||||  ||||||  ||||||| |||||||||||||| ||||   ||||||||||||| ||||  ||| |||||||||||||| ||||   |||||||    
T  46625005 tttctggccaagtttcggagcaattcgatcaagtagtccaaaaattagatttttgactaataacaactaataatgacccaaaacagaaggatgagagtta 46624906  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    |||||||||||||| | | ||||||||||||||||||||||||    
T  46624905 ggaagattaatattttccataaaatgactatacatgttacaaa 46624863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 5127782 - 5127923
Alignment:
Q  90 aagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagatta 189  Q
    |||||| | |||||| | ||||||||||||||||||| |||||||||| |||||||  |||||||||| ||||||||| ||   |||| || ||||||||    
T  5127782 aagtttcaaagcaattcaatcaagtagtccgaaaaccagatttttgaccaagaacaactaacaatgacgcaaaacaaatggatgagagctatgaagatta 5127881  T
Q  190 atattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||| | |||||||  ||| ||||||||||| |||||||    
T  5127882 atattgtccataaaatggatatccatgttacaaacatgttta 5127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 33439552 - 33439383
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtcc--ttgaatttttt----ctgattt-ctggggaagtt 94  Q
    |||||||||||||||||| |||||||| | |||||| || | |||| || |||||||||   ||  |||||||||||    ||||||| ||||| |||||    
T  33439552 atggaattttggattttgtggggcggagttccgtaacaagtcccttttatgggagtcattaaccacttgaattttttttttctgattttctgggcaagtt 33439453  T
Q  95 ttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaac 164  Q
    |  ||||||||||||||||||||||||||| | ||||||| |||||||| | ||||||||||||||||||    
T  33439452 tcggagcaatccgatcaagtagtccgaaaatctgatttttaactaagaaaaagtaacaatgacccaaaac 33439383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 40062745 - 40062552
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttc-tgattt-ctggggaagttttaga 99  Q
    |||||||||| ||||||||| | |  | | ||||||||| | ||||||| | ||||| || |||||||  |||||| |||||| || ||||| |||  |     
T  40062745 atggaattttagattttgagagacaaagtaccgtaagaagtcccttctacgagagtcttgatccttgatgtttttcctgattttctagggaaatttcggt 40062646  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||  ||| ||||||| |||||||||||   ||||||||||||||||||||    
T  40062645 gcaatctgatcaagtagcccgaaaaccagatttttgactaagaacaactaataatgacctaaaacaaaaggaccagagttaggaagattaatat 40062552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 29048695 - 29048486
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    ||||||||||||||||||||||||||| |||||||| || | | ||||| ||||||| || ||||||| |||||  || ||||    ||||        |    
T  29048695 atggaattttggattttgaggggcggagtcccgtaataagtcctttctacgggagtcttgatccttgattttttcttgttttc----gaag--------c 29048608  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttg-actaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||| | ||||||| |||||||  ||||||||||| ||||||||||| |||||| ||||  |||||||| ||||||||||||| | | |    
T  29048607 aatccgatcaagtagcctgaaaaccagatttttatactaagaacagttaacaatgacctaaaacataaggataagagttatgaagattaatattatcctt 29048508  T
Q  201 aaaatgactatacatgttacaaa 223  Q
    ||||| ||| | |||||||||||    
T  29048507 aaaataactgt-catgttacaaa 29048486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 4300154 - 4300269
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||||||||||||||||||||||  |||||  || || |||||  ||||||| ||||||||||  ||||||||||| || ||||||||   | |||||    
T  4300154 tttctggggaagttttagagcaatctaatcaataagcccaaaaactggattttttactaagaacatctaacaatgacctaatacaaaaggatgatagtta 4300253  T
Q  181 ggaagattaatattgt 196  Q
    ||||||||||||||||    
T  4300254 ggaagattaatattgt 4300269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 33438731 - 33438644
Alignment:
Q  156 acccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| ||||   ||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||| || |||||||    
T  33438731 acccaaaacagaaggatgagagttaggaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatttgtgctg 33438644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 14828710 - 14828944
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttga--attttttctgatttc-tggggaagttttag 98  Q
    |||||||||||||||||||  |||||| ||| ||||||| |  ||||||  ||| || || |||||||  |||||||  |||||  |||| ||||||  |    
T  14828710 atggaattttggattttgaaaggcggagtcctgtaagaagtctcttctagaggaatcttgatccttgattatttttttcgattttatgggaaagtttcgg 14828809  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttt-tgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt 197  Q
    |||||||| |||||||| |||||||| | |||||| ||||||||||||  |||||| ||||||||||| | ||   || |||| ||||||||||||| |     
T  14828810 agcaatccaatcaagtaatccgaaaatcagattttttgactaagaacaactaacaaggacccaaaacagatggatgagggttatgaagattaatattatc 14828909  T
Q  198 cctaaaatgactatacatgttacaaatatgtttag 232  Q
    | |||||| | ||| ||||||| ||| || |||||    
T  14828910 cttaaaattattatccatgttataaacatatttag 14828944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 3937563 - 3937502
Alignment:
Q  182 gaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||||||||| |||||||    
T  3937563 gaagattaatattgtccataaaatggttatacatgttacaaatatgtttaggatttgtgctg 3937502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 41300975 - 41300901
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt 76  Q
    |||||||||| |||||||| ||||||| ||||||||||| || |||||  |||||| ||||||||||| ||||||    
T  41300975 atggaatttttgattttgatgggcggagtcccgtaagaagtttcttctgcgggagtaatggtccttgattttttt 41300901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 500980 - 501034
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggag 56  Q
    ||||||||||||||||||||||||||| | ||||||||| | ||||||| |||||    
T  500980 atggaattttggattttgaggggcggagtgccgtaagaagtcccttctatgggag 501034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 34009888 - 34010075
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    |||||||||||||||||| |||||||| || |||||||| | ||||||| |  |||| || ||| ||| ||||||    ||||| |  || |||| ||||    
T  34009888 atggaattttggattttggggggcggagtcacgtaagaagtcccttctacgaaagtcttgatccatgattttttt----tttctagcaaaatttttgagc 34009983  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
     ||| ||| |||||| || ||| ||  |||||| ||||| | ||| ||||||||| | |||||||||||  ||||||||| || ||||||||    
T  34009984 gatctgataaagtagcccaaaatccatattttttactaatagcagataacaatgatctaaaacaaaaggataagagttagaaaaattaatat 34010075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 223
Target Start/End: Original strand, 54229775 - 54229913
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaa 184  Q
    ||||||||||| ||||||||| ||||||||||   |||||||  |||||||||||| ||||  ||||||||||| | |||| || |    |||| |||||    
T  54229775 tggggaagtttcagagcaatctgatcaagtagcaagaaaaccgaatttttgactaataacaactaacaatgacctagaacataatgatgcgagtaaggaa 54229874  T
Q  185 gattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    ||||||||| || | |||| ||  ||| |||||||||||    
T  54229875 gattaatatggtccttaaactggatattcatgttacaaa 54229913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 8735583 - 8735530
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  8735583 agttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 8735530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 9087824 - 9087771
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  9087824 agttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 9087771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 51816572 - 51816415
Alignment:
Q  9 tttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaatccg 107  Q
    |||| |||||||||||| || ||||||||||| | | ||||| ||| ||  || ||||||| |||||||| | ||| ||||||| |||  |||||||| |    
T  51816572 tttgaattttgaggggcagagtcccgtaagaagtccattctaggggtgttttgatccttgatttttttcttattttttggggaaatttcggagcaatctg 51816473  T
Q  108 atcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaca 165  Q
    ||||||||  | ||||||   ||||| ||||| |||||  ||||||||||| ||||||    
T  51816472 atcaagtaaccagaaaactatattttcgactaggaacaactaacaatgacctaaaaca 51816415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 29036024 - 29035933
Alignment:
Q  141 gaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||| ||||||||||| |||||| || |   ||||||||||||| |||||| || | |||||||| ||| ||||||||||| ||| ||||    
T  29036024 gaacagttaacaatgacctaaaacataatgatgagagttaggaagagtaatatggtccttaaaatgattatccatgttacaaacatgcttag 29035933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 45711886 - 45711952
Alignment:
Q  9 tttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt 76  Q
    |||||||||||||||| ||| ||||||||||| | ||||||||| ||||| || ||||| ||||||||    
T  45711886 tttggattttgaggggtggagtcccgtaagaagtcccttctaagagagtcttgatcctt-aatttttt 45711952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 47979973 - 47980028
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||| |||||||||||||| | ||||||||||||  |||||| |||||||||    
T  47979973 agagttagaaagattaatattgtccttaaaatgactatctatgttataaatatgtt 47980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 45244577 - 45244527
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||| | |||||||||||  ||||||||||| |||||    
T  45244577 taggaagattaatattgtccttaaaatgactaaccatgttacaaacatgtt 45244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 33842041 - 33842098
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||| ||| ||||||||||| | |||||||||||| ||| ||||||| |||||||    
T  33842041 agagttacgaacattaatattgtccttaaaatgactatccatattacaaacatgttta 33842098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26465118 - 26465078
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaat 41  Q
    ||||||||| |||||||||||||||| | ||||||||||||    
T  26465118 aatggaattctggattttgaggggcgaagtcccgtaagaat 26465078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 45244661 - 45244606
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| ||||||| || |||||||| | | |||||||||||||    
T  45244661 atggaattttggattttga-gggcggagtctcgtaagaagtcctttctaagggagtc 45244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 18583337 - 18583578
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |  |||||| ||||||| |||||||||||||| ||||||||| | |||||||||| |||    
T  18583337 aatggaattttggattttgaggggcggagtcccgtaagaagtctcttctatgggagtcgtggtccttgaatttgttctgattttttggggaagtttcaga 18583436  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||    
T  18583437 gcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggcagattaatattgtccc 18583536  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  18583537 taaaatggctatacatgttacaaatatgtttaggatttgtgc 18583578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 243
Target Start/End: Complemental strand, 23443100 - 23442861
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaa 103  Q
    |||||||||||||||||| || || ||  | ||||| |  |||||| |||||| ||||||||||||||||||||||||| | |||||||||| |||||||    
T  23443100 gaattttggattttgaggagcagagtcgtgcaagaagtctcttctatgggagttatggtccttgaattttttctgattttttggggaagtttcagagcaa 23443001  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  23443000 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaagattaatattgtccctaaa 23442901  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||| || ||||||||||||||||||||||||| |||||||    
T  23442900 atggctgtacatgttacaaatatgtttaggatttgtgctg 23442861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 33611203 - 33611446
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    ||||||||||||||||||||||| || | ||||||||||| | |||| || || ||||| |||||| |||||||||||||||| | |||||||||| |||    
T  33611203 aatggaattttggattttgagggacgtagtcccgtaagaagtcccttttatggaagtcacggtcctcgaattttttctgattttttggggaagtttcaga 33611302  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||| |     
T  33611303 gcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagatttaggaagataaatattgtcct 33611402  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  33611403 taaaatggctatacatgttacaaatatgtttaggatttgtgctg 33611446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 41584458 - 41584701
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttaga 99  Q
    ||||||||||| |||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||  ||    
T  41584458 aatggaattttagattgtgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaattttttctgattttctgggcaagtttcgga 41584557  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| |     
T  41584558 gcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtcca 41584657  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  41584658 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 41584701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 49786634 - 49786391
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| || | |||||| |  |||||| |||||||||||||||||||||||||||||||| | |||||||||| |||    
T  49786634 aatggaattttggattttgaggggcggagtctcataagaagtctcttctacgggagtcatggtccttgaattttttctgattttttggggaagtttcaga 49786535  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||| |||||| |||||||||||||||||  |||||||||||||||||||||||| |     
T  49786534 gcaatccgatcaagtaggccgaaaacttgatttttgactaaaaacatgtaacattgacccaaaacaaaaggataagagttaggaagattaatattgtcca 49786435  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||    
T  49786434 taaaatggctatacatgttacaaataagtttaggatttgtgctg 49786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 45046644 - 45046886
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctgggg-aagttttagag 100  Q
    ||||||||||||||||||||||||||| || | |||||| | |||||||||||||||||||||||||||||||||||||||| | ||| ||||||  |||    
T  45046644 atggaattttggattttgaggggcggagtctcataagaagtcccttctaagggagtcatggtccttgaattttttctgattttttgggcaagtttcggag 45046743  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  45046744 caatccgatcaagtagcccgaaaacccggtttttaactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 45046843  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
     |||||||||| ||||||||||| |||||||| || |||||||    
T  45046844 gaaatgactatccatgttacaaacatgtttagaatttgtgctg 45046886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 52744641 - 52744879
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||| |||||||| || ||| ||  ||||||| | ||||||| | |||||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  52744641 aattttgaattttgagaggtggagtcttgtaagaagtcccttctatgagagtcatggtccttgaattttttctgattttctggggaagtttcggagcaat 52744740  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||| ||||||||||||    
T  52744741 ccgatcaagtagtccgaaaacccaatttttgactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaagattaatgttgttcctaaaa 52744840  T
Q  205 tgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||||||||||| |||||||| || |||||||    
T  52744841 tgactatccatgttacaaacatgtttagcatttgtgctg 52744879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 42546332 - 42546090
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||    
T  42546332 atggaattttggattttgaggg-cggagtcccgtaagaagttccttctaagggagtcatggtccttaaattttttctgattttctggggaagtttcggag 42546234  T
Q  101 caatccgatcaagtagtccgaaaa-cccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| ||||||| |||| ||||| ||||||||||| |||||||||||||||||| ||||   |||||||| | |||||||||| |  |    
T  42546233 caatccgatcaagtagcccgaaaaacccggtttttaactaagaacagataacaatgacccaaaacagaaggatgagagttagaatgattaatattatctc 42546134  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  42546133 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 42546090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 40907728 - 40907970
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| |||| |||||| | |||| || | |||||||| ||||||||||||||||||||| ||||||||||||  |||    
T  40907728 atggaattttggattttgaggggcggagtcccataagaagtcccttttatgagagtcatgatccttgaattttttctgattttctggggaagtttcggag 40907827  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || || |    ||||||||||||||||||||||  ||    
T  40907828 caatccgatcaagtagtccgaaaacccgattttttactaacaacaggtaacaatgacccaaagcagaaagatgggagttaggaagattaatattgtctct 40907927  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||| ||||||||||| |||||||| || |||||||    
T  40907928 aaaatgattatccatgttacaaacatgtttagaatttgtgctg 40907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 34006622 - 34006403
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |||||||    
T  34006622 aattttggattttgagggacggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctggggaagtttcggagcaat 34006523  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-cctaaa 203  Q
    |||||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||| | ||||   |||||||||||||||||||||||| ||||||    
T  34006522 ccgatcaagtagcccgaaaacctaatttttgactaagaacaggtagcaatgacacaaaatagaaggatgagagttaggaagattaatattgttccctaaa 34006423  T
Q  204 atgactatacatgttacaaa 223  Q
    |||||||| |||||||||||    
T  34006422 atgactatccatgttacaaa 34006403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 45567724 - 45567926
Alignment:
Q  42 ttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaa 140  Q
    |||||||| | ||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  45567724 ttccttcttatggagtcatggtccttgaattttttctgattttttggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaa 45567823  T
Q  141 gaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtg 240  Q
    ||||||||||||||||||||||||||| ||   |||||||| |||||||||||||| |||||||||||||| ||| ||||||| |||||||| || ||||    
T  45567824 gaacaggtaacaatgacccaaaacaaatggatgagagttagaaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatttgtg 45567923  T
Q  241 ctg 243  Q
    |||    
T  45567924 ctg 45567926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 7011575 - 7011344
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaa-tttc--cttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttag 98  Q
    ||||||||||||||  |||||||||| |||| |||||| ||||  ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |    
T  7011575 tggaattttggatt--gaggggcggagtcccataagaagtttcttcttctaagggagtcatggtccttgaattttttctgattttctggggatgtttcgg 7011478  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||   ||||||| ||||||||||||||| |    
T  7011477 agcaatccgatcaagtagcccgaaaacccgatttttgactaaaaacaggttacaatgacctaaaacagaaggatgagagttaagaagattaatattgtcc 7011378  T
Q  199 ctaaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||||| ||||||| ||| ||||||||    
T  7011377 ctaaaatgactatccatgttagaaacatgtttag 7011344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 28866428 - 28866654
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||||| ||| | |||||||||||||||| |||||||||||||||||| |||| | ||||||||||  |||||||    
T  28866428 aattttggattttgaggggcggagtcccgtaggaagtgccttctaagggagtcacggtccttgaattttttctaattttttggggaagtttcggagcaat 28866527  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||   ||||||| ||||||||| | ||| | |||||    
T  28866528 ccgatcaagtagtccgaaataccgatttttgactaagaacaggtaacaatgtcccaaaacagaaggatgagagttatgaagattaaaaatgtccataaaa 28866627  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    || |||| ||||||||||| |||||||    
T  28866628 tggctatccatgttacaaacatgttta 28866654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 27795191 - 27794966
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||| ||||||| |  ||||||   |||||||| ||||||||||||||||||||| ||| ||||||||  |||||||    
T  27795191 aattttggattttgaggggcggagtcctgtaagaagtctcttctacaagagtcatgatccttgaattttttctgattttctgtggaagtttcggagcaat 27795092  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| ||| |  | ||||||||||||||||||||| | |||||    
T  27795091 ccgatcaagtagcccaaaaacccgatgtttgactaagaacaggtaacaatgacccaaaacagaagat-gatagttaggaagattaatattgtccataaaa 27794993  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    |||||||  |||||| ||| |||||||    
T  27794992 tgactatctatgttataaacatgttta 27794966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 6223547 - 6223762
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||  ||| ||||||| |  ||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| ||||    
T  6223547 atggaattttggattttgaggggcggtgtcc-gtaagaagtctcttctaagggagtcatgatccttgaattttt-ctgattttctgggaaagtttcagag 6223644  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||    | ||||||||     | |||||| |||    
T  6223645 caatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacctaaaacagaagaatgatagttagga-----attattgtccct 6223739  T
Q  201 aaaatgactatacatgttacaaa 223  Q
    ||||||||||| |||||||||||    
T  6223740 aaaatgactatccatgttacaaa 6223762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 49677786 - 49677617
Alignment:
Q  64 ccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaa 162  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||    
T  49677786 ccttgaattttttctgattttctggggaagtttcggagcaatccgatcaagtaggctgaaaacccgatttttaactaagaacatgtaacaatgacccaaa 49677687  T
Q  163 acaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    ||| |||    ||||||||||||||||||||||| ||||||||||||||  |||||||||| ||| ||||    
T  49677686 acataagaatgagagttaggaagattaatattgtccctaaaatgactatctatgttacaaacatggttag 49677617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 44 - 230
Target Start/End: Original strand, 26723324 - 26723511
Alignment:
Q  44 ccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaaga 142  Q
    |||| ||||||||||||  ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  26723324 ccttataagggagtcataatccttgaattttttctgattttctggggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaaga 26723423  T
Q  143 acaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-cctaaaatgactatacatgttacaaatatgttt 230  Q
    |||| |||||||||| ||||| | || |   ||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  26723424 acagataacaatgactcaaaatagaatgatcagagtaaggaagattaatattgttccctaaaatgactat-catgttacaaacatgttt 26723511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 17000664 - 17000501
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagtt 179  Q
    |||||||||||||||  ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| |  ||||   ||||||    
T  17000664 tttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaaacggaaggatgagagtt 17000565  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  17000564 aggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 17000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 38885578 - 38885371
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaa-gttttagag 100  Q
    ||||||||||| ||||||||||||||| |||| |||||| | ||||| | | |||| ||||| |||||||||||| | |||| | ||||| ||||  |||    
T  38885578 atggaattttgaattttgaggggcggagtcccataagaagtcccttccaggagagttatggtgcttgaatttttttttattttttgggaaagtttcggag 38885479  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||   ||||||||||| ||||||||||| | |    
T  38885478 caatccgatcaagtagcccgaaaacccaatttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaaaattaatattgtcctt 38885379  T
Q  201 aaaatgac 208  Q
    ||||||||    
T  38885378 aaaatgac 38885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 44572897 - 44573121
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaa 103  Q
    |||||||| ||||||| ||||||| |||| |||||| |  |||||| ||||||||||||||||||||||||||||||||  |||||||||||  ||||||    
T  44572897 gaattttgaattttgatgggcggagtcccctaagaagtctcttctatgggagtcatggtccttgaattttttctgattttatggggaagtttcggagcaa 44572996  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    || |||||||| | ||  ||     | ||||||||||||||| |||||||||| |||||||| ||||   |||||||| |||||||||||||| ||||||    
T  44572997 tctgatcaagttgcccctaagt---aattttgactaagaacaagtaacaatgatccaaaacagaaggatgagagttagaaagattaatattgtccctaaa 44573093  T
Q  204 atgactatacatgttacaaatatgttta 231  Q
    |||||||| ||||||||||| |||||||    
T  44573094 atgactattcatgttacaaacatgttta 44573121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 24472626 - 24472851
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaat 104  Q
    ||||||||||||||| ||||||| ||||| ||||| | ||||||| ||||||| || |||||| ||||||||||| |||||||||||||||  |||||||    
T  24472626 aattttggattttgaagggcggagtcccgcaagaagtcccttctatgggagtcttgatccttg-attttttctgattttctggggaagtttcggagcaat 24472724  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    || ||||||| | ||  |||  |||||||||||||||||||| ||||||||||| |||||| |||    | |||||||||| |||||||| | | |||||    
T  24472725 ccaatcaagttgcccacaaattcgatttttgactaagaacagctaacaatgaccaaaaacagaagaatgatagttaggaagcttaatattttccttaaaa 24472824  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    ||||||| ||||||||||| |||||||    
T  24472825 tgactatccatgttacaaacatgttta 24472851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 231
Target Start/End: Original strand, 15069686 - 15069865
Alignment:
Q  52 gggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaa 150  Q
    |||||| ||||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||||  |||||| ||||||||| |||||||||| ||||    
T  15069686 gggagtgatggtccttgatttttttctgattttctgggaaag-tttcgagcaatccgatcaagtagctcgaaaatccgatttttaactaagaacaagtaa 15069784  T
Q  151 caatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||| |||||||| ||||   | |||||| ||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  15069785 caatgatccaaaacagaaggatgaaagttagtaagattaatattgtctctaaaatgactatccatgttacaaacatgttta 15069865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 34162595 - 34162758
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagtt 179  Q
    |||||||||||||||  |||||| || ||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||| |  ||||  | |||||    
T  34162595 tttctggggaagtttcggagcaaaccaatcaagtagcccgaaaattcgatttttgactaagaacatgtaacaatgacccaaaaacggaaggataggagtt 34162694  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  34162695 aggaagattaatattgtccctaaaatggctatccatgttacaaacatgtttagaatttgtgctg 34162758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 40650549 - 40650691
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||| ||||||||  ||||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||  | ||||   |||||||    
T  40650549 tttctgaggaagtttcggagcaatccgatcaagtagcccgaaaactcggtttttaactaagaacaggtaacaatgacccaaacgagaaggatgagagtta 40650648  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    |||||||||||||||| |||||||||| ||| |||||||||||    
T  40650649 ggaagattaatattgtccctaaaatgattatccatgttacaaa 40650691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 25563272 - 25563436
Alignment:
Q  66 ttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaac 164  Q
    |||||||||| ||||||| || |||||||||  |||||||||||||||||||  |||| | | ||||||||||||| ||||  ||||||||||| |||||    
T  25563272 ttgaatttttcctgattttcttgggaagtttcggagcaatccgatcaagtagctcgaatatcggatttttgactaataacaactaacaatgacctaaaac 25563371  T
Q  165 aaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||   || |||| |||| |||||||||| | |||||||||||| ||| ||||||| |||||    
T  25563372 aaaaggatgagggttatgaagcttaatattgtccttaaaatgactatccatattacaaacatgtt 25563436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 32817557 - 32817647
Alignment:
Q  153 atgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||| ||||    |||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||    
T  32817557 atgacccaaaacagaaggatgggagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttaggatttgtgctg 32817647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 3561133 - 3561357
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaat 104  Q
    ||||||| |||||||||||||||   ||  ||||| |  |||||| ||||||| || | ||||| | |||||||||||  |||| ||||||  |||||||    
T  3561133 aattttgaattttgaggggcggagctccacaagaagtcacttctatgggagtcttgattcttgattgttttctgattttatgggaaagtttcggagcaat 3561232  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    | |||||||||  || || | | ||||||||||||||||||  ||||||||||| |||||| || |   |||||||| |||||||||| ||| | |||||    
T  3561233 ctgatcaagtaacccaaagatcggatttttgactaagaacaactaacaatgacctaaaacagaatgatgagagttagaaagattaatactgtccttaaaa 3561332  T
Q  205 tgactatacatgttacaaatatgtt 229  Q
    | |||||  |||||||||| |||||    
T  3561333 ttactatctatgttacaaacatgtt 3561357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 42929165 - 42929031
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaa 184  Q
    |||| ||||||  |||||||| ||||||||||  |||||||| ||||||||||| ||||||  ||||||||| | |||||| |||    ||||||| |||    
T  42929165 tgggaaagtttcggagcaatctgatcaagtagctcgaaaaccagatttttgactgagaacaactaacaatgatctaaaacataagaatgagagttaagaa 42929066  T
Q  185 gattaatattgttcctaaaatgactatacatgtta 219  Q
     |||||||| || | ||||||| | ||||||||||    
T  42929065 aattaatatggtccttaaaatggcaatacatgtta 42929031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 32542561 - 32542516
Alignment:
Q  198 cctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||    
T  32542561 cctagaatgactatacatgttacaaatatgtttaggatttgtgctg 32542516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 43318949 - 43319002
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||| |||||    
T  43318949 agttaggaagattaatattgttcttaaaatgactatcaatgttacaaacatgtt 43319002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 890801 - 890738
Alignment:
Q  90 aagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaa 153  Q
    ||||||| |||||||| |||||||||  ||||||||| |||||||||||||||| || ||||||    
T  890801 aagttttggagcaatctgatcaagtaacccgaaaaccagatttttgactaagaatagctaacaa 890738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41584374 - 41584423
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttcta 50  Q
    ||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  41584374 aatggaattttagattttgaggggcggagtcccgtaagaagtcccttcta 41584423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 800687 - 800742
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| |||| || ||||||||||| | |||||||||||||||    
T  800687 atggaattttggattttga-gggcagagtcccgtaagaagtcccttctaagggagtc 800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 9445987 - 9446038
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    |||||||||||||||||| |||| ||||||||||| | |||||||||||||||    
T  9445987 aattttggattttgaggg-cggagtcccgtaagaaatcccttctaagggagtc 9446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 9445853 - 9445911
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||||||||| ||| | | |||||||||||| |||| |||||| ||||||||    
T  9445853 agagttaggaagattaacattctccttaaaatgactatccatgctacaaagatgtttag 9445911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 49677828 - 49677790
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaa 40  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  49677828 atggaattttgaattttgaggggcggagtcccgtaagaa 49677790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 8364199 - 8364143
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||||||| |||||||||| ||  |||||||||||| ||||||||||| |||||||    
T  8364199 agagttagga-gattaatattatttttaaaatgactatccatgttacaaacatgttta 8364143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 800559 - 800615
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttt 230  Q
    ||||||||||| ||||||||||| |  ||||||||||| |||| |||||| ||||||    
T  800559 agagttaggaaaattaatattgtcctaaaaatgactatccatgctacaaacatgttt 800615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 27400079 - 27400123
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttcta 50  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||||    
T  27400079 aattttcgattttgaggggcggagtcctgtaagaagttccttcta 27400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 43319079 - 43319134
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| ||||||| ||||||||||| |  ||||||||| ||||    
T  43319079 atggaattttggattttga-gggcggagtcccgtaagaagtctcttctaaggaagtc 43319134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 45879983 - 45880095
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||||  ||||||  |||||||  |||||||||  || |||||  ||||||||||||| || |  ||||||||||| |||||| ||||   | |||||    
T  45879983 tttctggataagtttcggagcaatttgatcaagtatcccaaaaactagatttttgactaaaaaaaactaacaatgacctaaaacagaaggatgaaagtta 45880082  T
Q  181 ggaagattaatat 193  Q
    |||||||||||||    
T  45880083 ggaagattaatat 45880095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 31643406 - 31643172
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctgg-ggaagttttaga 99  Q
    |||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||||| |||    
T  31643406 aatggaattttggattttgaggggtggagtcccataagaagttccttctaagggagtcatggtccttgaattttttctgattttttgcggaagtttcaga 31643307  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  31643306 gcaatccgatcaagtagtccgaaa-cccgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagttaggaagattaatattgtccc 31643208  T
Q  200 taaaatgactatacatgttacaaatatgtttaggat 235  Q
    ||||||  |||||||||||| |||||||||||||||    
T  31643207 taaaatagctatacatgttaaaaatatgtttaggat 31643172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 8155265 - 8155022
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctg-gggaagttttaga 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||| ||||||||||||||||||||| |  ||||||||| |||    
T  8155265 aatggaattttggattttgaggggcggagtcccgtaagaagttccttgtacgggagtcatgatccttgaattttttctgatttttttgggaagtttcaga 8155166  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||| |||||||||| ||||||| ||    
T  8155165 acaattcgatcaagtagtccgaaaacccgatttttgactaagaacaggtaataatgaccaaaaacaaaaggataagagctaggaagattgatattgtccc 8155066  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  8155065 taaaatggctatacatgttacaaatatgtttaggatttgtgctg 8155022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 47202853 - 47202617
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| |||| |||||| | ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||    
T  47202853 aatggaattttggattttgaggggcggagtcccttaagaagtcccttctatgggagtcatggtccttgaattttttctgattttttggggaagtttaaga 47202754  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||| ||||||||| ||||||||||||||||||||||||       ||| ||||||||||||||||||  |||||||||||||||||||||||| ||    
T  47202753 gcaatccaatcaagtagcccgaaaacccgatttttgactaag-------aacgatgacccaaaacaaaaggataagagttaggaagattaatattgtccc 47202661  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||| | |||||||||||||||||||||||||||| |||||||    
T  47202660 taaaacggctatacatgttacaaatatgtttaggatttgtgctg 47202617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 9152156 - 9151919
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||||    |||||| ||||||||  ||||    
T  9152156 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgattttttt----tttctgtggaagtttcggagc 9152061  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||    
T  9152060 aatccgatcaagtagtccaaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtcccta 9151961  T
Q  202 aaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| ||||||||||| |||||||| || |||||||    
T  9151960 aaatgactatccatgttacaaacatgtttagaatttgtgctg 9151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 19818744 - 19818503
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||| |||||| ||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||  |||    
T  19818744 atggaattttggattt-gaggggtggagtcccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttctgggaaagtttcggag 19818646  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  19818645 caatccgatcaagtagtccaaaaacccgattttcgaccaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 19818546  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||| ||||| ||||||||||  ||||||||||| |||||||    
T  19818545 aaaataactatccatgttacaagcatgtttaggatttgtgctg 19818503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 42864898 - 42865138
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatt-tccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagca 102  Q
    |||||||||||||||||||||||| |||| |||||| | || ||||||||||||||||||||||||||| ||||| |||| ||||||| |||| ||||||    
T  42864898 gaattttggattttgaggggcggagtcccataagaagtctctttctaagggagtcatggtccttgaattgtttctaattttctggggatgtttcagagca 42864997  T
Q  103 atccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||   ||||||||||||||||||||||| |||||    
T  42864998 atccgatcaagtagtccgaaaacctgatttttgaccaagaacaggtgacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccctaa 42865097  T
Q  203 aatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||| ||||||||||| || ||||| || |||||||    
T  42865098 aatgactatccatgttacaaacatatttagaatttgtgctg 42865138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 42925434 - 42925677
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||  |||    
T  42925434 atggaattttggattttgaggggcggagtcccataagaagtcccttctaagggagtcatggtccttgaattgtttctgattttctgggtaagtttcggag 42925533  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| |  ||||   ||||||||||||||||||||||| ||    
T  42925534 caatccgatcaagtagcccgaaaacccaatttttgactaagaacaagtaacaatgatccaaaaacggaaggatgagagttaggaagattaatattgtccc 42925633  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  42925634 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 42925677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 3304544 - 3304794
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctg--------gggaag 92  Q
    |||| ||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||||||||||| |||||| |  ||| ||        ||||||    
T  3304544 aatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtccttgattttttttttttttttgatttttttgggaag 3304643  T
Q  93 ttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaata 192  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  3304644 tttcagagcaatccgatcaagtagcccgagaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaatgataagagttaggaagattaata 3304743  T
Q  193 ttgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||| |||||||||  ||||||||||||||||||||||||||| |||||||    
T  3304744 ttgtccctaaaatggttatacatgttacaaatatgtttaggatttgtgctg 3304794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 19225392 - 19225634
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |||    
T  19225392 atggaattttggattttgaggggcggagtcctgtaagaagttccttctatgggagtcatgttccttgaattttttctgattttctggggaagtttcggag 19225491  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||   ||||||||||||||| ||||  | | |    
T  19225492 caatccgatcaaatagtccgaaaacctgatttttgactaagaatgggtaacaatgacccaaaacagaaggatgagagttaggaagatttatatcatccat 19225591  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||| ||||||||||| |||||||| || |||||||    
T  19225592 aaaatgaatatccatgttacaaacatgtttagaatttgtgctg 19225634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 43737447 - 43737237
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||| |||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || |||  |||    
T  43737447 atggaattttagattttgaggggcggagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctgggaaaatttcggag 43737348  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  43737347 caatccgatcaagtagcccgaaaacccggtttttaactaagaacatgtaacaatgacccaaaacataaggatcagagttaggaagattaatattgtccct 43737248  T
Q  201 aaaatgactat 211  Q
    |||||||||||    
T  43737247 aaaatgactat 43737237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 36468337 - 36468573
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||| || |||||||||||| ||||||||||| | ||||  ||||||||| ||||||| |||||||  ||||||| ||||||||||||  |||||||    
T  36468337 aattttgaatcttgaggggcggagtcccgtaagaagtccctttaaagggagtcgtggtcctcgaatttt--ctgattttctggggaagtttcggagcaat 36468434  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||   ||||||| |||||||||||||||||||||||    
T  36468435 ccgatcaagtagcccgaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagttatgaagattaatattgttcctaaaa 36468534  T
Q  205 tgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||||||||||| |||||||| || |||||||    
T  36468535 tgactatccatgttacaaacatgtttagaatttgtgctg 36468573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 208
Target Start/End: Complemental strand, 36629568 - 36629361
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagag 100  Q
    ||||||||||||||||||| ||  ||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| | ||||||||||  |||    
T  36629568 atggaattttggattttgaaggatggagtcccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttttggggaagtttcggag 36629469  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||   ||||||||||||||||||||| | |||    
T  36629468 caatccgatcaagtagcccgaaaacccgatttttgactaagaccaggtaacagtgagccaaaacagaaggatgagagttaggaagattaatattctccct 36629369  T
Q  201 aaaatgac 208  Q
    ||||||||    
T  36629368 aaaatgac 36629361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33573841 - 33574078
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    |||| ||||||||||||||||||||||| ||||||||||| | ||||||   ||||||||     |||||||||||||||||| | |||||||||| |||    
T  33573841 aatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctttaggagtcat-----ttgaattttttctgattttttggggaagtttcaga 33573935  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||||| ||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||  ||||||||| |||||||||||||| ||    
T  33573936 gcaatccgatcaagtagttcgaaaacccaatttttgattaaaaacatgtaacaatgactcaaaacaaaaggataagagttagaaagattaatattgtccc 33574035  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||   ||||||||||||||||||||||| ||| ||||||    
T  33574036 taaaatagttatacatgttacaaatatgtttatgatttgtgct 33574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 33151555 - 33151331
Alignment:
Q  14 attttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagcaatccgatcaag 113  Q
    ||||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||   |||||||||  ||  ||||||||||||    
T  33151555 attttgaagggtggagtcccgtaagaagtcccttctaagggagtcatggtccttgaattttttctgattttctgggaagtttcggaataatccgatcaag 33151456  T
Q  114 tagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatac 213  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||| | ||||   ||||||||||||||||||||||| ||||     ||||| |    
T  33151455 tagtcagaaaacccaatttttgactaagaacagataacaatgacccaaaatagaaggatgagagttaggaagattaatattgtcccta-----actattc 33151361  T
Q  214 atgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| |||||||| || |||||||    
T  33151360 atgttacaaacatgtttagaatttgtgctg 33151331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 36408678 - 36408494
Alignment:
Q  60 tggtccttgaattttttctgatttctggg-gaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc 158  Q
    |||||||||||||||||||||||| | || |||||||  |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  36408678 tggtccttgaattttttctgattttttggagaagtttcggagcaatccgatcaagtagtccgaaaaccaaatttttgactaagaacacgtaacaatgacc 36408579  T
Q  159 caaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| |||  | ||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||    
T  36408578 caaaacagaagaaagagagttaagaagattaatattgtccctaaaattactatccatgttacaaacatgtttagaatttgtgctg 36408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 37518057 - 37518215
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||| ||||||| |  |||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||    
T  37518057 atggaattttggattttgaggggcggagtcctgtaagaagtctcttctatgggagtcatggtccttgaattttttctgattttctggggaagtttcggag 37518156  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc 159  Q
    |||||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||||    
T  37518157 caatccgatcaaatagtccaaaaacccaatttttaactaagaacaggtaacaatgaccc 37518215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 3936393 - 3936243
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| | ||||   |||||||    
T  3936393 tttctggggaagtttcggagcaatccgatcaagcagtccgaaaatccgatttttgactaagaataggtaacaatgacccaaaatagaaggatgagagtta 3936294  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||||||||||||| |||||||||| ||| ||||||||||| |||||||    
T  3936293 ggaagattaatattgtccctaaaatgattatccatgttacaaacatgttta 3936243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 24690133 - 24690350
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaa 103  Q
    ||||||||||||||||||||   | ||| ||||||| | |||   |||||||||||| |||||||||||||||||||||  ||| |||||||  ||||||    
T  24690133 gaattttggattttgaggggtaaagtcctgtaagaagtccct---aagggagtcatgatccttgaattttttctgattttatggagaagtttcggagcaa 24690229  T
Q  104 tccgatcaagtagtccgaaaac-ccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    ||||||||||||| |||||||  |||||| |||||||||||| |||||||||||||||||||||||||   ||||||||| ||||||||||||| | |||    
T  24690230 tccgatcaagtagcccgaaaaatccgattattgactaagaacgggtaacaatgacccaaaacaaaaggatgagagttaggtagattaatattgtccataa 24690329  T
Q  203 aatgactatacatgttacaaa 223  Q
    |||||| || |||||||||||    
T  24690330 aatgacgatccatgttacaaa 24690350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 31985314 - 31985541
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaa 103  Q
    |||||||||| |||||||||| || ||| ||||||| | ||||||| | |||||||| ||||||| |||||||||||||  |  | ||||||| || |||    
T  31985314 gaattttggagtttgaggggcagagtcctgtaagaaatcccttctatgagagtcatgatccttgagttttttctgattttgtaagaaagttttggaacaa 31985413  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    || |||||||||| || |||||| ||||||||||||||||| | |||||||||||||||||| || |   |||||||| |||||||||||||| | ||||    
T  31985414 tctgatcaagtagcccaaaaaccagatttttgactaagaacggttaacaatgacccaaaacagaatgatgagagttagaaagattaatattgtccataaa 31985513  T
Q  204 atgactatacatgttacaaatatgttta 231  Q
    |||||||| ||||||| |||||||||||    
T  31985514 atgactattcatgttaaaaatatgttta 31985541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 7115062 - 7115259
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttag 98  Q
    |||||||||||||||||||||||  ||| ||||||||||| | ||||||||||||||| || ||||||| |||||| ||||||| ||| |||||||| ||    
T  7115062 aatggaattttggattttgagggaaggagtcccgtaagaagtcccttctaagggagtcttgatccttgattttttttctgattttctgaggaagtttcag 7115161  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgt 196  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||  ||||||||||| |||| | ||||   |||||||  ||||||||||||||    
T  7115162 agcaatacgatcaagtagcccgaaaacacgatttttgactaagaacaactaacaatgaccaaaaatagaaggatgagagttatcaagattaatattgt 7115259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 36946086 - 36946307
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||| ||| ||||| ||| || |||| || |||||| ||||||  || ||||||| ||||| ||| ||| ||||||||||||   ||    
T  36946086 atggaattttggattttaaggtgcggagtccagttagaagttgcttctatgggagttttgatccttgattttttcctggttttctggggaagtttcgaag 36946185  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||| ||||||||||  ||||||||| || |||||||||| ||||  |||||||||||||||||||||||   |||||||||||| ||||||||| || |    
T  36946186 caattcgatcaagtatcccgaaaaccagaattttgactaataacaactaacaatgacccaaaacaaaaggatgagagttaggaagcttaatattg-tctt 36946284  T
Q  201 aaaatgactatacatgttacaaa 223  Q
    ||||||| ||| |||||||||||    
T  36946285 aaaatgattattcatgttacaaa 36946307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 28230376 - 28230504
Alignment:
Q  115 agtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactataca 214  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||   ||||||||||||||||||||||| | |||||||||||| ||    
T  28230376 agtccgaaaacccgaattttgactaagaacatgcaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccataaaatgactatcca 28230475  T
Q  215 tgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||| |||||||| || |||||||    
T  28230476 tgttacaaacatgtttagaatttgtgctg 28230504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 1518992 - 1518842
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    ||||| || ||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||| | ||||   |||||||    
T  1518992 tttctaggaaagtttcggagcaatccgatcaagtagtccgaaaaccctattttttactaagaacagctaacaataacccaaaatagaaggatgagagtta 1518893  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
     ||||||||||||||| | |||||||| |||  |||||||||| |||||||    
T  1518892 agaagattaatattgtccataaaatgattatcgatgttacaaacatgttta 1518842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 24041991 - 24042224
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||| ||||||||||||||||||||| ||||||||||| | ||  |||  |||||||||||||||||||||||||||| |||||||||||||||  |||    
T  24041991 atggagttttggattttgaggggcggagtcccgtaagaagtccca-ctacaggagtcatggtccttgaattttttctgattttctggggaagtttcggag 24042089  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    || ||||||||| ||| | |||||||||||||||| |          ||| |||||||| |||||  ||||   ||||||||||||||| ||||||| ||    
T  24042090 cagtccgatcaaatagcctgaaaacccgatttttgtc--------cctaa-aatgacccaaaaacggaaggatgagagttaggaagattgatattgtccc 24042180  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||  |||||||||| |||||||| || |||||||    
T  24042181 taaaatgactatcaatgttacaaacatgtttagaatttgtgctg 24042224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 26555012 - 26555113
Alignment:
Q  63 tccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaa 161  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||| |||||||||||||||    
T  26555012 tccttgaattttttctgattttctgggaaagtttcagagcaatccgatcaagtagcccgaaaacccgtttttttactaagaacatgtaacaatgacccaa 26555111  T
Q  162 aa 163  Q
    ||    
T  26555112 aa 26555113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 6466935 - 6467165
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt----ctga-tttctggggaagttttagag 100  Q
    |||||| |||||||||||||||| |||| ||||||  | ||||||  |||||| || ||||||| ||||||    |||| ||||| ||||| ||| |||     
T  6466935 aattttagattttgaggggcggagtcccataagaa-gtacttctataggagtcttgatccttgatttttttattcctgattttctagggaaatttcagaa 6467033  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| | ||| |||  |||||| ||||||||||| ||||||||||| |||| | |||| | ||||||||||| ||||||||||  | |    
T  6467034 caatccgatcaagtagccggaataccaaatttttaactaagaacagctaacaatgacctaaaatagaaggaagagagttaggaaaattaatattgccctt 6467133  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||| ||||| ||| ||||||| ||||||||    
T  6467134 aaaataactatccatattacaaacatgtttag 6467165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 5278501 - 5278401
Alignment:
Q  129 atttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgt 228  Q
    |||| ||||||||||| | |||||||||||||||||| ||||  |||||||||||||||||||||| | | |||||||||||| ||||||||||| ||||    
T  5278501 atttgtgactaagaacggctaacaatgacccaaaacagaaggataagagttaggaagattaatattatccttaaaatgactatccatgttacaaacatgt 5278402  T
Q  229 t 229  Q
    |    
T  5278401 t 5278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 37398685 - 37398877
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt----ctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||| | |||||| | |||||| | | |||||||| || | || ||||||| ||||||    |||| ||||| |||||||||  |||    
T  37398685 aattttggattttgaggagtggaatcacataagaagtccattctaaggaagacttgatccttgattttttttttcctgattttctagggaagtttcggag 37398784  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
    ||||| |||||||||| |  ||||||  |||||| ||||||||||  ||||||||||| |||||| || |   ||||||||||||||||||||    
T  37398785 caatctgatcaagtagcctaaaaaccgaattttttactaagaacaactaacaatgacctaaaacagaatgatgagagttaggaagattaatat 37398877  T

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Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 43186150 - 43186031
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt----ttctga-tttctggggaagtttt 96  Q
    ||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||| || ||||||| ||||    |||||| |||||| | || |||     
T  43186150 atggaattttggatttttaggggcggagtcccgtaagaagtcccttctaagggagtcttgatccttgatttttcttcttctgattttctgtgaaaatttc 43186051  T
Q  97 agagcaatccgatcaagtag 116  Q
    ||||||||| ||||||||||    
T  43186050 agagcaatcggatcaagtag 43186031  T

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Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 28230286 - 28230367
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt 83  Q
    |||||||||| |||||||||||| ||| |||| ||| ||  || ||||||||||||||||||||||| ||||||||||||||    
T  28230286 atggaattttagattttgaggggtggagtcccataataaggtctttctaagggagtcatggtccttgtattttttctgattt 28230367  T

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Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 37518235 - 37518320
Alignment:
Q  147 gtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||||| |||||| ||||   ||||||||||||||||||| ||||||||||||||||||   ||||||||| ||||||||    
T  37518235 gtaacaatgacctaaaacagaaggatgagagttaggaagattaatagtgttcctaaaatgactatctctgttacaaacatgtttag 37518320  T

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Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 16278374 - 16278322
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||| | ||||| ||||||||||| | |||||||||||||||    
T  16278374 aattttggattttgatgtgcggagtcccgtaagaagtcccttctaagggagtc 16278322  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 8214257 - 8214312
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | || ||||||||| |||||| |||| |||||    
T  8214257 agagttaggaagattaatattgtccttagaatgactatccatgttgcaaacatgtt 8214312  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 8214468 - 8214523
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | ||||||||| ||  |||||||||| |||||    
T  8214468 agagttaggaagattaatattgtccttaaaatgacaatcgatgttacaaacatgtt 8214523  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 39582020 - 39581913
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaa 184  Q
    ||||||| ||||  ||||||  |||||||||| || |||||| |||||||||| ||||| |  ||||||||||| |||||| |||    ||||||| |||    
T  39582020 tggggaattttttaagcaatatgatcaagtagcccaaaaaccggatttttgacgaagaataactaacaatgacctaaaacagaagaatgagagttatgaa 39581921  T
Q  185 gattaata 192  Q
    ||||||||    
T  39581920 gattaata 39581913  T

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Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 47239563 - 47239622
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaa 140  Q
    |||||| ||||||||  |||||||| ||||||||| |||||||| | |||||||||||||    
T  47239563 tttctgtggaagtttcggagcaatctgatcaagtactccgaaaatcagatttttgactaa 47239622  T

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Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 48775798 - 48775743
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||  |||||||    
T  48775798 agttaggaagattaatattgtccttaaactgactattcatgttacaagcatgttta 48775743  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 5730943 - 5731001
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||| ||||||||||||||   |||||||||||| |||| |||||| ||||||||    
T  5730943 agagttagaaagattaatattgtatttaaaatgactattcatgctacaaacatgtttag 5731001  T

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Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 8214388 - 8214442
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggag 56  Q
    ||||||||||||||| ||||||||| | || |||||||| | |||||||||||||    
T  8214388 atggaattttggattgtgaggggcgaagtctcgtaagaagtcccttctaagggag 8214442  T

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Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 36408728 - 36408694
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgta 36  Q
    ||||||||||||||||||||||||||| |||||||    
T  36408728 atggaattttggattttgaggggcggactcccgta 36408694  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 26554957 - 26554998
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaattt 43  Q
    |||||||||||||||||||||||| || |||| |||||||||    
T  26554957 atggaattttggattttgaggggcagagtcccataagaattt 26554998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 5731073 - 5731128
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| ||| ||| || |||||||| | |||||||||||||||    
T  5731073 atggaattttggattttga-gggtggagtctcgtaagaagtcccttctaagggagtc 5731128  T

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Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6228606 - 6228841
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctg-gggaagttttaga 99  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||| |  |||||||||||||    
T  6228606 aatggaattttggattttgaggggaggagtcctgtaagaagttccttctacgggagtcatggttcttgaattttttctgatttttttgggaagttttaga 6228705  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  6228706 gcaatccgatcaaatagcccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaagattaatattgtccc 6228805  T
Q  200 taaaatgactatacatgttacaaatatgtttaggat 235  Q
    ||||||| ||||||||||||| ||||| ||||||||    
T  6228806 taaaatggctatacatgttactaatatctttaggat 6228841  T

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Target: chr4; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 32442184 - 32441941
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttaga 99  Q
    |||| ||||||  ||||||||||||| |||||| |||||| |  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  32442184 aatgaaattttttattttgaggggcgaaatcccataagaagtctcttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcaga 32442085  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||       
T  32442084 gcaatccgatcaagtagcccgaaaactcgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaagattaatattgtctt 32441985  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||    
T  32441984 taaaatggttatacatgttacaaatatgtttacgatatgtgctg 32441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34973238 - 34973003
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| ||||| ||||| | |||| || | ||||||||||||||||||||||||| ||||  | ||||||||| |||    
T  34973238 aatggaattttggattttgaggggcggagtcccgaaagaagtcccttttaggagagtcatggtccttgaattttttctaattttatagggaagtttcaga 34973139  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||||| ||    
T  34973138 gcaatccgatcaagtagtctgaaaacccgatttttgactaagaacagataacaatgacctaaaacaaaaggataagagttaggaagattaatattgtccc 34973039  T
Q  200 taaaatgactatacatgttacaaatatgtttaggat 235  Q
    ||||||| ||||||||||||||||||||||||||||    
T  34973038 taaaatggctatacatgttacaaatatgtttaggat 34973003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 25491189 - 25491431
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||||||||| ||||||||| | |||| | ||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||    
T  25491189 atggaattttggattttgagggacggaatcccttgagaagtcccttctaagggagtcatggtccttgaactttttctgattttctggggaaattttggag 25491288  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| | |    
T  25491289 caatccgatcaagtagtccaaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccat 25491388  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| |||||||| || |||||||    
T  25491389 aaaatgactattcatgttacaaacatgtttagaatttgtgctg 25491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 40704037 - 40703795
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||   ||    
T  40704037 atggaattttagattttgaggggcggagtcccgtaagaagttccttctaatgaagtcatggtccttgaattttttctgattttctggggaagtttcttag 40703938  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  40703937 caatccgatcaagtagtccaaaaacccgatttttgactaagaaaagataacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 40703838  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| |||||||| || |||||||    
T  40703837 aaaatgactatccatgttacaaacatgtttagaatttgtgctg 40703795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 19835894 - 19835651
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| ||||||||||| | |||| || |||||||||||| ||||||||||||||||||| ||||| ||||||  ||    
T  19835894 aatggaattttggattttgaggggcggagtcccgtaagaagtcccttttaggggagtcatggtacttgaattttttctgattttctgggaaagtttcgga 19835795  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| || |   ||||||||||||||||||||||||||    
T  19835794 gcaatccgatcaagtagtccgaaaacccgacttttgactaaaaacaggtaacaatgacgcaaaacagaaagatgagagttaggaagattaatattgttcc 19835695  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  19835694 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 19835651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 49397385 - 49397147
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagag 100  Q
    |||| |||||||||||||||||||| ||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  49397385 aatgaaattttggattttgaggggccgaatcccataagaagtttcttcttagggagtcatggtccttgaattttttctgattttttgggaagtttcagag 49397286  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  49397285 caatccgatcaagtagctcgaaaacccgatttttgactaagaacatgtaacaatgactcaaaacaaaaggataagagttaggaagattaatattgtccct 49397186  T
Q  201 aaa----atgactatacatgttacaaatatgtttaggat 235  Q
    |||    |||  |||||||||||||||||||||||||||    
T  49397185 aaaatggatggttatacatgttacaaatatgtttaggat 49397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 54631286 - 54631486
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||| ||||||||| ||||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  54631286 atggaattttgtattttgaggtgcggagtcccgtaagaagtcctttctatgggagtcatggtccttgaattttttctgattttctggggaagttttggag 54631385  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  54631386 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 54631485  T
Q  201 a 201  Q
    |    
T  54631486 a 54631486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 17932931 - 17933173
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||||||| ||||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||  |||    
T  17932931 atggaattttggattttgagaggcggaatctcttaagaagttctttctaagggagtcatggtccttgaattttttctgattttctggagaagtttcggag 17933030  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||| ||| ||||| | ||||||| |||||||||||||||||||||||||||||| ||||   ||||||||||||||||||| ||| |||    
T  17933031 caatccgatcaagtggtctgaaaatctgattttttactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaataatgtccct 17933130  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||| ||||||||||| |||||||| || |||||||    
T  17933131 aaaatgattatccatgttacaaacatgtttagaatttgtgctg 17933173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 6003470 - 6003707
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaa-gttttagagcaa 103  Q
    |||||||||||||||||||||||| |||||||||||   |||| || || |||||||||| |||||||||||||||||| | ||||| |||| |||||||    
T  6003470 gaattttggattttgaggggcggagtcccgtaagaagccccttttatggaagtcatggtctttgaattttttctgattttttgggaaagtttcagagcaa 6003569  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    ||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||    
T  6003570 tccaatcaagtagcccgaaaacctgatttttgactaagaacaagtaacaatgacccaaaacaaaaggataagagttaggaagattaatattatccctaaa 6003669  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    |||||||||||| ||| ||||||||||| ||| |||||    
T  6003670 atgactatacatattaaaaatatgtttatgatttgtgc 6003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 53893824 - 53894061
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagcaatc 105  Q
    |||||||||||||||||||||||  ||| |||||| | ||||||| |||||| ||||||||  |||||||||||||||    |||||||| |||||||||    
T  53893824 aattttggattttgaggggcggagacccataagaagtcccttctacgggagtgatggtcctgaaattttttctgattttctcggaagtttcagagcaatc 53893923  T
Q  106 cgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaat 205  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||| |||||||||||||| ||||||||    
T  53893924 cgatcaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttagaaagattaatattgtccctaaaat 53894023  T
Q  206 gactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||| ||||||||||| |||||||| || |||||||    
T  53894024 gactatccatgttacaaacatgtttagaatttgtgctg 53894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 25752237 - 25752479
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||    
T  25752237 atggaattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatggtccttgaatcttttctgattttctggggaagtttcggag 25752336  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || || |   |||| |||||||||| ||||||| |     
T  25752337 caatctgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatcacccaaaaacataaagatgagagctaggaagattgatattgtcct 25752436  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    |||||||||||| ||||||||||| |||||||| || ||||||    
T  25752437 taaaatgactatccatgttacaaacatgtttagaatttgtgct 25752479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 48318858 - 48319100
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||| ||||||| | ||||| | | |||||||||||||||||||||||||||||| |||||||| |||   ||    
T  48318858 atggaattttggattttgaggggcggagtcctgtaagaagtcccttccaggagagtcatggtccttgaattttttctgattttctggggaaatttcgaag 48318957  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  48318958 caatccgatcaagtagtccgaaaatccgattttttactaagaatagataacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 48319057  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||  |||||||||| |||||||| || |||||||    
T  48319058 aaaatgactatcaatgttacaaacatgtttagaatttgtgctg 48319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 7932029 - 7931789
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||   ||    
T  7932029 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttctgggaaagtttcgaag 7931930  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||| |||||||||||||||| ||||||||||| || |||| |||||||||||||||||| | |||   ||||||||||||||||||||||| |||    
T  7931929 caatccgaccaagtagtccgaaaactcgatttttgaccaaaaacatgtaacaatgacccaaaac-agaggatgagagttaggaagattaatattgtccct 7931831  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||| ||||| ||||||||||| |||||||| || ||||||    
T  7931830 aaaataactatccatgttacaaacatgtttagaatttgtgct 7931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 2505828 - 2506055
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaa 103  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||||||| ||||||| ||| ||| | ||||||  ||||||    
T  2505828 gaattttggattttgaggggcagaatcccgtaagaagtcccttcttggggagtcatggtccttgaatgttttctgcttttctgagaaagtttcggagcaa 2505927  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||   ||| ||||||||||||||||||| ||||||    
T  2505928 tccgatcaagtagcccgaaaacccgattattgactaagaacatgtaacaatgacccaaaacagaaggatgagaattaggaagattaatattgtccctaaa 2506027  T
Q  204 atgactatacatgttacaaatatgttta 231  Q
    |||||||| ||||||||||| |||||||    
T  2506028 atgactatccatgttacaaacatgttta 2506055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 52089541 - 52089316
Alignment:
Q  19 gaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagt 117  Q
    |||||||||| ||||||||||| | ||||||| | |||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  52089541 gaggggcggagtcccgtaagaagtcccttctatgagagttatggtccttgaattttttctgattttctggggaagttttgaagcaatccgatcaagtagt 52089442  T
Q  118 ccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgt 217  Q
    || |||||||||||||||||||||||||||||||||||||||||| || |||    | ||||||||| ||||||||||| || ||||||||||| |||||    
T  52089441 ccaaaaacccgatttttgactaagaacaggtaacaatgacccaaaccagaagaatgaaagttaggaaaattaatattgtcccaaaaatgactatccatgt 52089342  T
Q  218 tacaaatatgtttaggatctgtgctg 243  Q
    |||||| ||||||| ||| |||||||    
T  52089341 tacaaacatgtttaagatttgtgctg 52089316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 46440070 - 46440310
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||  ||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  46440070 aattttggattttgaggggcggagtcccgtaagaagtcccttctttgggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaat 46440169  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaaga--acaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    |||||||||||||||||||| ||||||||||| |||||  |||||||||||||| | |||| | ||||   ||||||| |||||||| |||||| |||||    
T  46440170 ccgatcaagtagtccgaaaatccgatttttgattaagaacacaggtaacaatgatctaaaagagaaggatgagagttatgaagattagtattgtccctaa 46440269  T
Q  203 aatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||| ||| ||||||||||  |||||||| || |||||||    
T  46440270 aatgaatatccatgttacaaccatgtttagaatttgtgctg 46440310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 8106763 - 8106536
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaat 104  Q
    |||||| ||||||||| |||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||  ||| |||    
T  8106763 aatttttgattttgagaggcggagtcccgtaagaagttccttctacgggagtcatgatccttgaattttttctgattttttggggaagtttcggagtaat 8106664  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc-ctaaa 203  Q
    | |||||||||| || |||||| ||||||||| |||||||||||||||||||| ||||||| ||||   |||||||| |||||||| ||||||| |||||    
T  8106663 ctgatcaagtagcccaaaaacctgatttttgaataagaacaggtaacaatgactcaaaacagaaggatgagagttagaaagattaacattgttctctaaa 8106564  T
Q  204 atgactatacatgttacaaatatgttta 231  Q
    |||||||| ||||||||||| |||||||    
T  8106563 atgactatccatgttacaaacatgttta 8106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 38536544 - 38536303
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| |||| |||||| | | |||||| ||||| |||||||||||||||||||||| |||||||| ||||||| ||     
T  38536544 atggaattttggattttgaggggcggagtcccataagaagtcctttctaaaggagttatggtccttgaattttttctgattttctgggaaagttttggaa 38536445  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc-caaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||||||||||||||| | ||||||  |||||||||||||||||| ||||||||||||  |||||| ||     ||||||||||||||||||||||| |     
T  38536444 caatccgatcaagtagcctgaaaacttgatttttgactaagaacatgtaacaatgacctaaaaacagaataatgagagttaggaagattaatattgtcca 38536345  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    |||||||||||| ||||||||||| |||||||| || |||||    
T  38536344 taaaatgactattcatgttacaaacatgtttagaatttgtgc 38536303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27741906 - 27742138
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||| ||||  ||||||||||||||| | ||||| ||||  ||    
T  27741906 aatggaattttggattttgaggggcggagtcccataagaagttccttctacgggaggcatgatcctccaattttttctgattttcgggggatgtttcgga 27742005  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-c 198  Q
    |||||||||| |||||| |||||||||||||||||||||||||| | ||| ||||||| ||||||| ||||   |||||||||||||||||||||||| |    
T  27742006 gcaatccgattaagtagcccgaaaacccgatttttgactaagaaaatgtaccaatgactcaaaacagaaggatgagagttaggaagattaatattgttcc 27742105  T
Q  199 ctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||| |||||  |||||||||| |||||||    
T  27742106 ctaaaataactatttatgttacaaacatgttta 27742138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 41412962 - 41413134
Alignment:
Q  72 tttttctgatttct-ggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg 170  Q
    |||||||||||| | |||||||||| ||| ||||| |||||||||| ||||||||| ||||||||| |||||||| |||||||||||| ||||||||| |    
T  41412962 tttttctgattttttggggaagtttcagaacaatctgatcaagtagcccgaaaaccagatttttgattaagaacatgtaacaatgacctaaaacaaaatg 41413061  T
Q  171 taaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41413062 ataagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatttgtgctg 41413134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 25538772 - 25539015
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||| |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||| |||||||| |||||||||||| ||||||| ||||  |||    
T  25538772 atggtattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatgttccttgaaatttttctgattttctggggatgtttcggag 25538871  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttcc 199  Q
     ||||| ||||||||| | |||||||  ||||||||||||||| ||||||||||||||||||| |  ||||   ||||||| ||| ||||||||||| ||    
T  25538872 aaatccaatcaagtagcctgaaaaccaaatttttgactaagaagaggtaacaatgacccaaaaacggaaggatgagagttaagaaaattaatattgtccc 25538971  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  25538972 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 25539015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 31582224 - 31582458
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    |||||||||||||||||||||||||||||||   ||||| | |||||||||| | |||||||| |||||||||||      |||||| ||||||  ||||    
T  31582224 atggaattttggattttgaggggcggaatccaa-aagaagtcccttctaaggaaatcatggtctttgaatttttt------tctgggcaagtttcggagc 31582316  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    ||||||||||| ||| ||||||||  |||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||| ||||| ||||||| ||    
T  31582317 aatccgatcaattagcccgaaaactagatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaaaattaacattgttcata 31582416  T
Q  202 aaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| ||||||||||| |||||||| || |||||||    
T  31582417 aaatgactatccatgttacaaacatgtttagaatttgtgctg 31582458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 29822953 - 29822784
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatt-tctggggaagttttagag 100  Q
    ||||||||||| |||||||||||| || ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  29822953 atggaattttgaattttgaggggcagagtcccgtaggaagtcccttctacgggagtcatggtccttgaattttttctgattgtctgggcaagtttttgag 29822854  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg 170  Q
    |||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||| ||||    
T  29822853 caatccgatcaagtagcccgaaaatccaatttttgattaagaacatgtaacaatgacccaaaacagaagg 29822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 41322895 - 41323117
Alignment:
Q  11 tggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgat 109  Q
    |||||||||||||||||||||||||||||| |  ||||||   || || || ||| |||||||||| |||||| |||||||| |||  ||||||||||||    
T  41322895 tggattttgaggggcggaatcccgtaagaagtctcttctacaagaatcttgatccgtgaattttttatgattttctggggaactttcggagcaatccgat 41322994  T
Q  110 caagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgact 209  Q
    ||||||  |||||||| | |||||| ||||||||||  ||||||||||| |||||||||||   ||||||||||||||||||||||| | |||||||| |    
T  41322995 caagtatgccgaaaactcaatttttaactaagaacaattaacaatgaccaaaaacaaaaggatgagagttaggaagattaatattgtccataaaatgatt 41323094  T
Q  210 atacatgttacaaatatgtttag 232  Q
    || ||||||||||| ||||||||    
T  41323095 atccatgttacaaacatgtttag 41323117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 3703049 - 3703285
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggg-gaagttttagag 100  Q
    ||||||||||||||||||| || |||| |||| |||||| |   |||||||||||||||| || ||||||||||| |||||| | || |||||||| |||    
T  3703049 atggaattttggattttgaaggacggagtcccataagaagtcatttctaagggagtcatgatctttgaattttttttgattttttggagaagttttggag 3703148  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||      ||| ||||||| ||||||||||||||| |  |||||||| ||||| |||||| ||||   ||||||| ||||||||||||| |||||    
T  3703149 caatccg------tagcccgaaaatccgatttttgactaaaagtaggtaacattgacctaaaacagaaggatgagagttatgaagattaatattcttcct 3703242  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||  |||||||||| |||||||| || |||||||    
T  3703243 aaaatgactatctatgttacaaaaatgtttagaatttgtgctg 3703285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 18050983 - 18051113
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||||| ||| |||||||| ||||||  |||    
T  18050983 atggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctgggaaagtttcggag 18051082  T
Q  101 caatccgatcaagtagtccgaaaacccgatt 131  Q
    ||||| |||||||||||||||||| ||||||    
T  18051083 caatctgatcaagtagtccgaaaatccgatt 18051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 38417160 - 38417021
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaat 104  Q
    ||||||||||||||| ||||||| ||| ||||||| | ||||||| | |||||||||||||||||||||| || |||| | ||||||||||||||||| |    
T  38417160 aattttggattttgaagggcggagtcctgtaagaagtcccttctacgtgagtcatggtccttgaattttt-ctaattttttggggaagttttagagcact 38417062  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaaca 145  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  38417061 ccgatcaagtagctcgaaaacccgatttttgactaagaaca 38417021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 49001353 - 49001516
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-----ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||| ||||||  ||||||     ||||||| |||| ||| |||  ||    
T  49001353 aattttggattttgaggagcggagtcccgtaagaagtcccttctaagggagtcatgatccttgttttttttttcttctgattttctggagaattttcgga 49001452  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa 163  Q
    ||||||||||||||||| ||||||| | |||||||||||| |||||| ||||||||||||||||    
T  49001453 gcaatccgatcaagtagcccgaaaatcagatttttgactatgaacagttaacaatgacccaaaa 49001516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 55052492 - 55052655
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc-caaaacaaaaggtaaagagtt 179  Q
    ||||| |||||||||  ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||  ||||   ||||   | ||||    
T  55052492 tttctagggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgaccaaaaaatggaaggatgatagtt 55052591  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  55052592 aggaagattaacattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 55052655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 47456978 - 47456781
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt-----ttctga-tttctggggaagttt 95  Q
    |||||||||||||||||||||| |||| | || |||||| |  ||||||  |||||| || ||||||| ||||     |||||| |||||||||||||||    
T  47456978 atggaattttggattttgagggacggagttccataagaagtctcttctagaggagtcttgatccttgatttttttttcttctgattttctggggaagttt 47456879  T
Q  96 tagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
      |||||||| |||||||||| |||||||||  ||||||||||||||| |  ||||||||||| |||||| ||||   ||| ||||||||||||||||    
T  47456878 cggagcaatctgatcaagtagcccgaaaaccgaatttttgactaagaatatctaacaatgacctaaaacataaggatgagatttaggaagattaatat 47456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 52089627 - 52089546
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt 83  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||| |||||||||||||||||||||||||    
T  52089627 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagttatggtccttgaattttttctgattt 52089546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 14474013 - 14474233
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttc-taagggagtcatggtccttgaatttttt--ctgattt-ctggggaagttttagagc 101  Q
    |||||||||| |||||||||||| ||||||||||| | ||||| || |||||||      ||||| ||||||  ||||||| |||   ||||||  ||||    
T  14474013 aattttggatcttgaggggcggagtcccgtaagaagtcccttcctatgggagtc------cttgattttttttcctgattttctgaaaaagtttcggagc 14474106  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||||||||||||||   ||||||  |||||||||  |||||||||||||||||||| |||| | ||||   || ||||||||||||||||||||| ||     
T  14474107 aatccgatcaagtagcttgaaaacaggatttttgatcaagaacaggtaacaatgacctaaaatagaaggatgagggttaggaagattaatattgtt-ctt 14474205  T
Q  202 aaatgactatacatgttacaaatatgtt 229  Q
    ||| |||||| ||||||||||| |||||    
T  14474206 aaacgactatccatgttacaaacatgtt 14474233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 7863717 - 7863574
Alignment:
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt 197  Q
    |||||||| ||| |||||| |||||||||  |||||| | ||||||||| || |||||||| |||||| ||||  || ||||||||| |||||||||||     
T  7863717 gagcaatctgattaagtagcccgaaaaccgaattttttattaagaacagttaccaatgacctaaaacagaaggataaaagttaggaatattaatattgtc 7863618  T
Q  198 cctaaaatgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    | |||||||| | | ||||||||||| |||||||| || |||||    
T  7863617 cttaaaatgattgtccatgttacaaacatgtttagaatttgtgc 7863574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 372289 - 372125
Alignment:
Q  7 attttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaatc 105  Q
    |||||| ||||||||||| ||| ||||||||||| | |||| ||||| |||| || || |||| |||||| ||| |||||||| ||||||   |||||||    
T  372289 attttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgatttttttgtgagtttctgggaaagtttcgtagcaatc 372190  T
Q  106 cgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg 170  Q
    | || || ||||| |||||   |||||||||||||||| |  |||||||||||||||||| ||||    
T  372189 caattaattagtctgaaaattggatttttgactaagaagaactaacaatgacccaaaacagaagg 372125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23524161 - 23524079
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt 83  Q
    |||| ||||||||||||||||||||| | |||| ||| || | ||||||  ||||||||||||||||||||||||||||||||    
T  23524161 aatgaaattttggattttgaggggcgaagtcccataataagtcccttcttcgggagtcatggtccttgaattttttctgattt 23524079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 47874041 - 47873953
Alignment:
Q  143 acaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||||||||||| |||||||| ||||   ||| ||| ||||||||||||||| |||||||||||||| ||||||| ||| |||||||    
T  47874041 acaggtaacaatgatccaaaacagaaggatgagaattaagaagattaatattgtccctaaaatgactatccatgttataaacatgttta 47873953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 5803222 - 5803382
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttcta-agggagtcatggtccttga----attttttctgatttctggggaagtttt 96  Q
    ||||||||||| |||||| |||| ||| |||| |||||| |||||||||  ||||||| || |||||||     ||| ||||||||| | ||||||||||    
T  5803222 atggaattttgaattttgtggggtggagtcccataagaagttccttctagggggagtcttgatccttgattttctttcttctgattttttgggaagtttt 5803321  T
Q  97 agagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgac 157  Q
     ||||||||  ||||||||| || |||||   |||||||||||| ||||| ||||||||||    
T  5803322 tgagcaatctaatcaagtagcccaaaaactaaatttttgactaaaaacagctaacaatgac 5803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 25140473 - 25140528
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  25140473 agagttaggaagattaatattgttcttaaaatgattatacatgttacaaacatgtt 25140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 4936520 - 4936675
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt------ttctga-tttctggggaagttttag 98  Q
    |||||||||||||||||| |||| |||| |||||| |  |||||||||||||| || ||| ||| ||||      |||||| ||||| | ||| |||| |    
T  4936520 aattttggattttgagggacggagtcccataagaagtatcttctaagggagtcttgatccatgattttttttttcttctgattttctagagaaattttgg 4936619  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 154  Q
    |||||||||||||| ||| || |||| | ||||||| ||||||||||| |||||||    
T  4936620 agcaatccgatcaaatagcccaaaaatcagatttttaactaagaacagctaacaat 4936675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 25140603 - 25140658
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||    
T  25140603 atggaattttggattttgatgg-cggaatcccgcaagaagttccttctaagggagtc 25140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 37222336 - 37222170
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt-----ttctga-tttctggggaagtttt 96  Q
    |||||||||||||||||||||| ||| || |||||||| |||||||||| |||||| || | ||||| ||||     |||||| ||||||   ||||||     
T  37222336 tggaattttggattttgaggggaggagtctcgtaagaagttccttctaa-ggagtcttgattcttgatttttttttcttctgattttctgtaaaagtttc 37222238  T
Q  97 agagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaca 165  Q
     |||||||| |||| ||||  |||| ||||  |||||| ||||||||||  ||||||||||||||||||    
T  37222237 ggagcaatctgatc-agtaccccgagaaccgaattttttactaagaacaactaacaatgacccaaaaca 37222170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 55838866 - 55838978
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||| ||| |||||||||||||||| | | |||||| |||||||||  ||||| ||||  |||||  ||||||||||| |||||| ||||   |||||||    
T  55838866 tttcagggaaagttttagagcaatctggttaagtagcccgaaaaccaaattttcgactgggaacaactaacaatgacctaaaacataaggattagagtta 55838965  T
Q  181 ggaagattaatat 193  Q
    || ||||||||||    
T  55838966 gggagattaatat 55838978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 20083343 - 20083269
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt 76  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||||||| || ||||| || | ||||| ||||||    
T  20083343 atggaattttggattttgaggagcggaatcccacaagaagttccttctcagtgagtcttgattcttgattttttt 20083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 25140894 - 25140944
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  25140894 taggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 25140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 49002822 - 49002890
Alignment:
Q  175 gagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||||||||||| | | ||||||||||||  |||||||||| || ||||| || |||||||    
T  49002822 gagttaggaagattaatattttccataaaatgactatttatgttacaaacatatttagaatttgtgctg 49002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 25140687 - 25140737
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||| |||||    
T  25140687 taggaagattaatattgtcctcaaaatgactatccatgttacaaacatgtt 25140737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 23524071 - 23524038
Alignment:
Q  210 atacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||||||||||||||||| |||||||    
T  23524071 atacatgttacaaatatgtttaggatttgtgctg 23524038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 27181488 - 27181544
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||||||| |||||||||| ||  |||||||||||| ||||||||||| |||||||    
T  27181488 agagttagga-gattaatattatttttaaaatgactatccatgttacaaacatgttta 27181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 27879792 - 27879679
Alignment:
Q  130 tttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||| |||||  ||||||||| | |||||||||     ||||||||||| |||||||| || | ||||||||| || ||||||||||  |||||    
T  27879792 tttttgactaggaacaactaacaatgatctaaaacaaaattatgagagttaggaatattaatatggtccttaaaatgaccattcatgttacaagcatgtt 27879693  T
Q  230 taggatctgtgctg 243  Q
     || || |||||||    
T  27879692 cagaatttgtgctg 27879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 48095656 - 48095825
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttct-----gatttc-tggggaagttt 95  Q
    ||||||||| |||||||||  |||||| ||||| ||||| | |||||||   ||||| || ||||||| |||||| |     |||||  |||||||||||    
T  48095656 atggaatttcggattttgaaaggcggagtcccgcaagaagtcccttctacatgagtcttgatccttgatttttttttcttcagattttatggggaagttt 48095755  T
Q  96 tagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaca 165  Q
       ||||||  ||| |||||| ||||||||| ||||||||||||| || |  ||||||||||| ||||||    
T  48095756 cgaagcaatatgataaagtagcccgaaaaccagatttttgactaaaaataactaacaatgacctaaaaca 48095825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 48629360 - 48629409
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaa 51  Q
    ||||||||||  |||||||||||||||||| |||||||| | ||||||||    
T  48629360 atggaattttaaattttgaggggcggaatctcgtaagaagtcccttctaa 48629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 42894742 - 42894500
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||    
T  42894742 atggaattttggattttgaggggcggagtcccgtaagaagttccttctaagggagtcatggtccttgaattttttctaattttctggggaagtttcggag 42894643  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
     |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||| |||    
T  42894642 taatccgatcaagtagtccgaaaactcgatttttgcctaagaacatgtaacaatgacccaaaacagaaggaagagagttaggaagattaatattgtccct 42894543  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||| ||||||| ||| |||||||| || |||||||    
T  42894542 aaaatgattatccatgttagaaacatgtttagaatttgtgctg 42894500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 25217566 - 25217805
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaa 103  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||||| | ||||| |  ||||||    
T  25217566 gaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaattttttctgattttctagagaagtgtcggagcaa 25217665  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| |||| | ||||||||||||||||| ||||| || ||    
T  25217666 tccgatcaagtagcccgaaaacccgattttttactaagaacaggtaacaatgacccaaaaacagaaggaagagagttaggaagattaaaattgtccccaa 25217765  T
Q  203 aatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||||| |||| |||||| |||||||| || ||||||    
T  25217766 aatgactatccatgctacaaacatgtttagaatttgtgct 25217805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 41510222 - 41510448
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||| ||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||  |||||||    
T  41510222 aattttggattttgaggggtggagtcccataagaagttccttctaagagagtcatggtccttgaattttttctgattttctagggaagtttcggagcaat 41510321  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||| ||||||||||  ||||| |||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| |||||||    
T  41510322 ccgatcaagtagcccgaaaacccagtttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccctaaaa 41510421  T
Q  205 tgactatacatgttacaaatatgtttag 232  Q
    ||||||| ||||||||||| ||||||||    
T  41510422 tgactat-catgttacaaacatgtttag 41510448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 34517468 - 34517224
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt--ctga-tttctggggaagttttag 98  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||| ||||||||||||||  |||| |||||||| ||||||  |    
T  34517468 atggaattttggattttgaggtgcggaatcccgtaagaagtcccttctatgggagtcatgatccttgaattttttttctgactttctgggtaagtttcgg 34517369  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||   | ||||| || ||||||||||||||    
T  34517368 agcaatccgatcaagtattccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggatgaaagttatgatgattaatattgttc 34517269  T
Q  199 ctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
     |||||||||||| ||||||||  | |||||||| || |||||||    
T  34517268 ataaaatgactatccatgttaccgacatgtttagaatttgtgctg 34517224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 33452231 - 33452473
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||| || |||||||||||||||||| |||||| ||||||| ||||| ||||||  ||    
T  33452231 atggaattttggattttgaggggcggagtcccgtaagaagtcgcttttatgggagtcatggtccttgattttttttctgattttctgggaaagtttcgga 33452330  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||||||    ||||||||||||||||||||||| ||    
T  33452331 gcaatccgatcaagtagtccagaaacccgatttttgactaagaacagataacaaagacccaaaacaaaagaatgagagttaggaagattaatattgtccc 33452430  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    |||||||| ||| ||||||||||| |||||||| || ||||||    
T  33452431 taaaatgattatccatgttacaaacatgtttagaatttgtgct 33452473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 32187711 - 32187880
Alignment:
Q  55 agtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaa 153  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32187711 agtcatggtccttgaattttttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgaccaagaacaggtaacaa 32187810  T
Q  154 tgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    |||||||||||| ||||   ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  32187811 tgacccaaaacagaaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaa 32187880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 5507785 - 5507542
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||||||||||||| | || |||||| || |||||| |||||||||| |||||||||||||| ||||||| ||||||||||||  ||    
T  5507785 atggaattttggattttgaggggcggagttccataagaagtttcttctatgggagtcatgatccttgaatttttttctgattttctggggaagtttcgga 5507686  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||| |||    ||||||  ||||||||||||||||      
T  5507685 gcaatccgatcaagttgcccgaaaacctgatttttgactaagaacaggtagcaatgacccaaaacagaagaatgagagttgtgaagattaatattgttta 5507586  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  5507585 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 5507542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 41854692 - 41854903
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||| || |||||| |||||||||||||| ||||||| |||||||||||| |||    
T  41854692 atggaattttggattttgaggggcggagtcccataagaagttccttctaatggtgtcatgatccttgaatttttttctgattttctggggaagtttcaga 41854791  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| || |||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||   ||||||||||||||||||||||| ||    
T  41854792 gcaatccgatcaagtagcccaaaaatccggtttttaactaagaacagataacaatgactcaaaacagaaggatgagagttaggaagattaatattgtccc 41854891  T
Q  200 taaaatgactat 211  Q
    | ||||||||||    
T  41854892 tgaaatgactat 41854903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 38308620 - 38308840
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  38308620 aatggaattttggattttgaggggcggagtccaataaaaattcccttctaagggagtcatgatccttgaattttttctgattttctggggaagtttcaga 38308719  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagt--taggaagattaatattgtt 197  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||   | |||  || |||||||||||||||     
T  38308720 gcaatctgatcaagtagcccgaaatcccgatttttgactaagaacaggtaacaa-gacccaaaacagaaggatgatagttataagaagattaatattgtc 38308818  T
Q  198 cctaaaatgactatacatgtta 219  Q
    | ||||||||| || |||||||    
T  38308819 cataaaatgacaatccatgtta 38308840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 44465529 - 44465758
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||| |||  |||    
T  44465529 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttctggggaaatttcggag 44465628  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||             ||||| |||||||||||||||| ||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  44465629 caatccga-------------aaacctgatttttgactaagaagaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 44465715  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||  ||||||||||| |||||||| || |||||||    
T  44465716 aaaatgactaaccatgttacaaacatgtttagaatttgtgctg 44465758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 39447518 - 39447285
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttagagcaa 103  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||       ||||||||||||||||||| ||||||| || ||||||||| |||||||    
T  39447518 aattttggattttgaggggcggagtcccgtaagaagtcccttctag------catggtccttgaatttttttctgattttctagggaagtttcagagcaa 39447425  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    |||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||| | ||||   |||||||||||||||||||||||   ||||    
T  39447424 tccgatcaagcagtcggaagacccgatttttgactaagaacatgtaacaatgacccaaaatagaaggatgagagttaggaagattaatattgtctttaaa 39447325  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||| ||||||||||| |||||||| || |||||||    
T  39447324 atgactatccatgttacaaacatgtttagaatttgtgctg 39447285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 16750271 - 16750439
Alignment:
Q  55 agtcatggtccttgaattttttctgatt-tctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaa 153  Q
    |||||||||||||||||||||||||||| |||||||||||||  |  |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  16750271 agtcatggtccttgaattttttctgattgtctggggaagtttcggtacaatccgatcaagtagtccgaaaatccgattttttactaagaacagataacaa 16750370  T
Q  154 tgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    |||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  16750371 tgacccaaaacagaaggatgagagtta-gaagattaatattgttcctaaaatgactatccatattacaaa 16750439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 41202982 - 41203205
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||| ||||||| ||| ||||| | |  |||||| | |||||||   ||||||||||||||| |||| ||||||||||||  |||||||    
T  41202982 aattttggattttgatgggcggagtcctgtaaggagtctcttctacgagagtcat---ccttgaattttttctaattttctggggaagtttcggagcaat 41203078  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||| | ||||||| || |||||| |||||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||| | |||||    
T  41203079 ccgatcaagttgcccgaaaatccaatttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaagttaggaagattaatattgtccataaaa 41203178  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    ||||||| ||||||||||| |||||||    
T  41203179 tgactatccatgttacaaacatgttta 41203205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 15994912 - 15995133
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||||||||| | | ||||| | |||||      |||||||||||||||||||  |||||||||||  |||||||    
T  15994912 aattttggattttgaggggcggagtcccgtaagaagtccattctatgagagtc------cttgaattttttctgattttatggggaagtttcggagcaat 15995005  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||| ||||| ||||| || |||||| |||||||||| ||||||||||||||||||| || |   |||||||| |||||||||||||| | |||||    
T  15995006 ccgatcaaatagtctgaaaatccaattttttactaagaacatgtaacaatgacccaaaacagaatgatgagagttagaaagattaatattgtccataaaa 15995105  T
Q  205 tgactatacatgttacaaatatgtttag 232  Q
    ||||||| ||||||||||| ||||||||    
T  15995106 tgactatccatgttacaaacatgtttag 15995133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 232
Target Start/End: Complemental strand, 36875305 - 36875119
Alignment:
Q  46 ttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaaca 145  Q
    ||||| ||||||||| ||||||||||||||| |  ||| |||||||| ||  ||||||| |||| |||||||| |||||||||||||||| ||||||||     
T  36875305 ttctacgggagtcatagtccttgaattttttttattttatggggaagattcggagcaattcgattaagtagtctgaaaacccgatttttgcctaagaacg 36875206  T
Q  146 ggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||| | |||||||||||||| |||||||||||  |||||||    
T  36875205 ggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattatccctaaaatgactatccatgttacaaacttgtttag 36875119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 36948848 - 36948976
Alignment:
Q  115 agtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactataca 214  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||  |||||||    
T  36948848 agtccgaaaacccaatttttgactaagaacaggtaacaattacccaaaacaaaaggataagagttaggaagattaatattgtccctaaaatagctataca 36948947  T
Q  215 tgttacaaatatgtttaggatctgtgctg 243  Q
    ||||| ||||||||||||||| |||||||    
T  36948948 tgttataaatatgtttaggatttgtgctg 36948976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 30764011 - 30763804
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttagagcaa 103  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||| | ||||| || || |||| |||||| ||||||| ||| ||||||||  ||||||    
T  30764011 aattttggattttgaggggcggagtcccgtaagaagtcccttctatgagagtcttgatctttgattttttttctgattttctgaggaagtttcggagcaa 30763912  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    ||||||||||| | || |||| | ||||||||||||||||||| ||||||||||| |||||| || |   ||||||||||||||||||||||| | ||||    
T  30763911 tccgatcaagttgcccaaaaatcagatttttgactaagaacagctaacaatgaccaaaaacagaaagatgagagttaggaagattaatattgtccataaa 30763812  T
Q  204 atgactat 211  Q
    ||||||||    
T  30763811 atgactat 30763804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 17474587 - 17474818
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||  | |    
T  17474587 atggaattttggattttgaggggcggagtcccgtaagaagtttcttctaagggagtcatggtccttgaattttttctgattttctggggaagtttctggg 17474686  T
Q  101 caatc--cgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
     | ||   | || |  |    |||||||||||||||||| ||||||||||||||||| | || |||| ||     |||||||||||||||||||||||      
T  17474687 aagtcatgggtcta-aacgatgaaaacccgatttttgacgaagaacaggtaacaatgccgcataacagaattatgagagttaggaagattaatattgtct 17474785  T
Q  199 ctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||||| ||||||||||| |||||||    
T  17474786 ctaaaatgactatccatgttacaaacatgttta 17474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 27670861 - 27670723
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||| ||||||||||||||| |||| |||||  |  |||||||||||||||||||| ||||||||||||||| ||| |||| ||||||  |||    
T  27670861 atggaattttgaattttgaggggcggagtcccataagaggtctcttctaagggagtcatggtcgttgaattttttctgattttatgggaaagtttcggag 27670762  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgacta 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27670761 caatccgatcaagtagtccgaaaacccgatttttgacta 27670723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 19109835 - 19110026
Alignment:
Q  35 taagaatttccttctaagggagtcatggtccttgaatttttt--ctga-tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatt 131  Q
    |||||| | ||||||| | ||||| || ||||||| ||||||  |||| ||||||| |||||||  |||||||||||||||||||||| |||||  ||||    
T  19109835 taagaagtcccttctatgagagtcttgatccttgattttttttcctgaatttctggtgaagtttcggagcaatccgatcaagtagtccaaaaactggatt 19109934  T
Q  132 tttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    ||||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||| | | ||||||||| || |||||||||||    
T  19109935 tttgactaagaacagctaacaatgacccaaaataaaaggatgagagttaggaagattaatattatccttaaaatgacgatccatgttacaaa 19110026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 38065370 - 38065530
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||||||||||| |  ||||||  ||||||||| |||||||||||||||||| ||| |||| ||||||  |||||||    
T  38065370 aattttggattttgaggggcggagtcccgtaagaagtctcttctacaggagtcatgatccttgaattttttctgattttatgggaaagtttcggagcaat 38065469  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaca 165  Q
    |||||||| ||| | ||||| |  |||||| ||||||||||||||||||| ||||||||||    
T  38065470 ccgatcaaatagcctgaaaatctaattttttactaagaacaggtaacaataacccaaaaca 38065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 45153708 - 45153810
Alignment:
Q  129 atttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgt 228  Q
    ||||| ||||||||||||||||||||||||||||||| ||||   ||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  45153708 attttggactaagaacaggtaacaatgacccaaaacagaaggatgagagttaagaagattaatattgtccctaaaatgactatccatgttacaaacatgt 45153807  T
Q  229 tta 231  Q
    |||    
T  45153808 tta 45153810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 42479082 - 42478916
Alignment:
Q  28 aatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagcaatccgatcaagtagtccgaaaacc 126  Q
    |||||| |||||| |  |||||| ||||||| || ||||||| |||||| |||||| | |||||||||| ||||||||| |||||||||| ||||||||     
T  42479082 aatcccataagaagtctcttctacgggagtcttgatccttgatttttttatgattttttggggaagtttcagagcaatctgatcaagtagcccgaaaact 42478983  T
Q  127 cgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
      |||||||||| ||||| | ||||||||||| |||||| ||||   ||||||||||||||||||||    
T  42478982 gaatttttgactgagaacggctaacaatgacctaaaacataaggatgagagttaggaagattaatat 42478916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 26228431 - 26228239
Alignment:
Q  7 attttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-----ctgatttc-tggggaagttttagag 100  Q
    |||||||||||||||||||| |||| |||||||| ||||||||| ||||||| || ||| ||| ||||||     |||||||  |||||||||||  ||     
T  26228431 attttggattttgaggggcgaaatctcgtaagaagttccttctatgggagtcttgatccatgatttttttttcttctgattttatggggaagtttcggac 26228332  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatat 193  Q
     |||| ||||||||||  |||||||  ||||||||||||||||||  ||||||| ||| |||||||||||   |||||||| |||||||||||    
T  26228331 gaatctgatcaagtagctcgaaaactagatttttgactaagaacaactaacaattacctaaaacaaaaggatgagagttagcaagattaatat 26228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 35251293 - 35251073
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttct--gattt-ctggggaagttttagagca 102  Q
    ||||||||||||| ||||||||| |  | |||||| | | ||||| ||||||| || ||||||  ||||||||  ||||| ||||| ||||||  |||||    
T  35251293 aattttggattttaaggggcggagtttcataagaagtactttctatgggagtcttgatccttggtttttttctctgattttctgggaaagtttcggagca 35251194  T
Q  103 atccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    ||| |||||||||| ||||||||| |||||| |||||||||||  ||||||||||| |||| | ||||  | |||||| |||||||||||| || | |||    
T  35251193 atctgatcaagtagcccgaaaaccggattttcgactaagaacaactaacaatgacctaaaatagaaggataggagttaagaagattaatatggtccttaa 35251094  T
Q  203 aatgactatacatgttacaaa 223  Q
    | || |||| ||| |||||||    
T  35251093 actggctatccatattacaaa 35251073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 8388909 - 8388774
Alignment:
Q  108 atcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatga 207  Q
    |||||||||  ||||||||||||||| ||||||||||||  ||||||||||||||||  ||||   ||||||||||||||||||||||| | ||| |||     
T  8388909 atcaagtagctcgaaaacccgattttagactaagaacagccaacaatgacccaaaactgaaggatgagagttaggaagattaatattgtccataagatgg 8388810  T
Q  208 ctatacatgttacaaatatgtttaggatctgtgctg 243  Q
    | || ||||||||||| || ||||| || |||||||    
T  8388809 caatccatgttacaaacatctttagaatttgtgctg 8388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 45293921 - 45293813
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaa 184  Q
    |||| |||||| ||||||||  |||||||||| ||||||||| ||||||||||||||||||  || |||||||| |||||| || |   |||||||||||    
T  45293921 tgggaaagtttcagagcaatatgatcaagtagcccgaaaaccggatttttgactaagaacaactagcaatgacctaaaacagaaagatgagagttaggaa 45293822  T
Q  185 gattaatat 193  Q
    |||||||||    
T  45293821 gattaatat 45293813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 32069031 - 32069249
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagcaat 104  Q
    ||||||||||||||||||| ||||  || ||||||| |  || ||| | |||||||| |||||||  ||||||| |||| |||| |||||| ||||||||    
T  32069031 gaattttggattttgagggacggagacctgtaagaagtcactactaggagagtcatgatccttgatatttttctaatttttgggaaagtttcagagcaat 32069130  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    | ||| |||||| | ||||||  ||||||||| | ||||||  || |||||||| |||||| |||    |||| |||||||| |||||| || | ||||     
T  32069131 ctgattaagtagcctgaaaacaagatttttgagtgagaacatctatcaatgacctaaaacataagtatgagagctaggaagactaatatggtccttaaat 32069230  T
Q  205 tgactatacatgttacaaa 223  Q
    || |||| |||| ||||||    
T  32069231 tggctatccatgatacaaa 32069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 33440299 - 33440526
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||| |||||||| |||||| ||||||||||| | |||| ||  |||||| || |||||     ||| ||||||| ||||||||||||  |||    
T  33440299 atggaattttgaattttgagaggcggagtcccgtaagaagtcccttttataggagtcttgatccttaggcctttcctgattttctggggaagtttcggag 33440398  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||| | | |||||||||| || ||||  |||||| || | ||||||  ||||||||||||||||| ||||   || ||||| |||||||||||| | | |    
T  33440399 caacctggtcaagtagtctgataaccgtattttttaccatgaacagtgaacaatgacccaaaacagaaggatgag-gttagaaagattaatattatcctt 33440497  T
Q  201 aaaatgactatacatgttacaaatatgtt 229  Q
    ||||||| | | ||||| ||||| |||||    
T  33440498 aaaatgaattttcatgtaacaaacatgtt 33440526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 37773616 - 37773827
Alignment:
Q  14 attttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggg-gaagttttagagcaatccgatcaa 112  Q
    ||||||||||||||| ||| ||||||| |||||||||  |||||  ||  |||||| |||||||| |||| | |  ||  ||| ||||||||| ||||||    
T  37773616 attttgaggggcggagtcctgtaagaagttccttctacaggagttttgaaccttgatttttttctaatttttcgtagacatttcagagcaatctgatcaa 37773715  T
Q  113 gtagtccgaaa-acccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactat 211  Q
    |||| || ||| ||  || |||||||||||||||  ||||||||| | |||||| ||||   |||||||| |||||||| || || | |||| || ||||    
T  37773716 gtagcccaaaatactggacttttgactaagaacaactaacaatgaactaaaacagaaggatgagagttagaaagattaacatagtccttaaactggctat 37773815  T
Q  212 acatgttacaaa 223  Q
     |||||||||||    
T  37773816 ccatgttacaaa 37773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 17766791 - 17766846
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  17766791 agagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 17766846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 9847386 - 9847440
Alignment:
Q  178 ttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||||||||||| | ||||||||||||  | |||||||||||||||||    
T  9847386 ttaggaagattaatattgtccttaaaatgactatcgacgttacaaatatgtttag 9847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 12885295 - 12885410
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt----ttctgatttctggg-gaagttttagag 100  Q
    |||||||| |||||||||||||| || |||||||| || |||||| ||||||| || || |||| ||||    ||||||||| ||||  |||||| ||||    
T  12885295 aattttgggttttgaggggcggagtcgcgtaagaagtttcttctacgggagtcttgctctttgattttttttcttctgatttttgggtaaagtttcagag 12885394  T
Q  101 caatccgatcaagtag 116  Q
    ||||| ||||||||||    
T  12885395 caatctgatcaagtag 12885410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 34519501 - 34519554
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||| | |||||||| ||| ||||||||||| |||||    
T  34519501 agttaggaagattaatattgtccttaaaatgattatccatgttacaaacatgtt 34519554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 13704690 - 13704770
Alignment:
Q  90 aagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg 170  Q
    |||||| ||||||||| |||||||||| ||||||| | ||||||||||| | ||||  ||||||| ||| |||||| ||||    
T  13704690 aagtttcagagcaatctgatcaagtagcccgaaaatcggatttttgactgaaaacaactaacaataacctaaaacagaagg 13704770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 32187673 - 32187711
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaa 40  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  32187673 atggaattttggattttgaggggtggagtcccgtaagaa 32187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 9847176 - 9847229
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||| ||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  9847176 agttatgaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 9847229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 17133086 - 17133034
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    |||||||||||||||||| |||| |||||||| || |  ||||||||||||||    
T  17133086 aattttggattttgagggtcggagtcccgtaaaaagtctcttctaagggagtc 17133034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 25715825 - 25715770
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| ||||||| |||| |||||| |  ||||||||||||||    
T  25715825 atggaattttggattttga-gggcggagtcccataagaaatctcttctaagggagtc 25715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12464911 - 12465154
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgatttct-ggggaagttttag 98  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||||||||||||||||| ||||||| | |||| ||||| ||    
T  12464911 aatggaattttggattttgaggggcagagtcccgtaagaagttccttctataggagtcatggtccttgaatttttttctgattttttggggtagtttcag 12465010  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||||| ||||||||||||||| |    
T  12465011 agcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgatccaaaacaaaaggataagagttatgaagattaatattgtcc 12465110  T
Q  199 ctaaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  12465111 ctaaaataactatacatattacaaatatgtttaggatttgtgct 12465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 39525103 - 39524872
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||||||||||| || ||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||  |||    
T  39525103 atggaattttggattttgaggggcagagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaaatttcggag 39525004  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||||||||||||    
T  39525003 caatctgatcaagtagttcgaaaacccaattttggactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgttcct 39524904  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||||||| ||||||||||||||||    
T  39524903 aaaatgactatacatattacaaatatgtttag 39524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 20891939 - 20891698
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    ||||||||||||||||||| || |||||||||||||||| | |||| || |||||||||| ||||||||||||||||| |||||||||||||||  ||||    
T  20891939 atggaattttggattttgaaggacggaatcccgtaagaagtcccttgtaggggagtcatgatccttgaattttttctgttttctggggaagtttcggagc 20891840  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||||| ||||   ||||||||||||||||||||| | ||||    
T  20891839 aatccgatcaagtagcctgaaaacccgatttttgactaagaataggtaacaataacccaaaacagaaggatgagagttaggaagattaatattatcccta 20891740  T
Q  202 aaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| ||||||||||| |||||||| || |||||||    
T  20891739 aaatgactatccatgttacaaacatgtttagaatttgtgctg 20891698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 37183575 - 37183806
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||  | ||||||| ||||||||||||||||||||||||||||||||  |||||| ||||  |||    
T  37183575 atggaattttggattttgaggggcggagtcccgtaagatgtcccttctacgggagtcatggtccttgaattttttctgattttatggggatgtttcggag 37183674  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |   ||||||||||||||||||||||| | |    
T  37183675 caatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacccaaaacaaaaagatgagagttaggaagattaatattgtccat 37183774  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||| ||||||||||| || |||||    
T  37183775 aaaatgactatccatgttacaaacatatttag 37183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 6157058 - 6156827
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||  |||    
T  6157058 atggaattttggattttgaggggcggagtcccgtaagaagtccctactacgggagtcatggtccttgaattttttctgattttctgggaaagtttcggag 6156959  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| || |||||||| ||||| |||||||||| |||||||||||| |||||| ||||   ||||||||||||||||||||||| |||    
T  6156958 caatccgatcaagtagcccaaaaacccggtttttaactaagaacatgtaacaatgaccaaaaacagaaggatgagagttaggaagattaatattgtccct 6156859  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||| ||||||||||| ||||||||    
T  6156858 aaaatgactatccatgttacaaacatgtttag 6156827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 31928923 - 31929148
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||| ||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  31928923 aattttggattttgaagggcggagtcccgcaagaagtcccttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaat 31929022  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||| ||||||||| | ||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||||||||||| ||||||||    
T  31929023 ccgatcaagtagcccgaaaacctggtttttaactaagaacaggtaacaatgactcaaaacagaaggatgagagttaggaagattaatattg-tcctaaaa 31929121  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    ||||||| ||||||||||| |||||||    
T  31929122 tgactatccatgttacaaacatgttta 31929148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 14112192 - 14111972
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||    
T  14112192 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggattcatggtccttgaattttttctgattttctggggaagtttcggag 14112093  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||  | ||||   | ||||||||||||||||||||| |||    
T  14112092 caatcctatcaagtagtccgaaaacccgatttttgactaagaacaagtaacaataacccaaa--ataaggatgaaagttaggaagattaatattgtccct 14111995  T
Q  201 aaaatgactatacatgttacaaa 223  Q
    ||||||||||| |||||||||||    
T  14111994 aaaatgactatccatgttacaaa 14111972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 15958072 - 15957845
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    |||||||||||||||| |||| | |||| |||||| |  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||    
T  15958072 aattttggattttgagaggcgaagtcccataagaagtcgcttctaagggagttatggtccttgaattttttctgattttctggggaagtttcggagcaat 15957973  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||| |||||||    
T  15957972 ccgatcaagtagtccgaaaacctgatttttgactaagaacaggtaataatgacccaaaacaaaagaaccagagttaggaagattaatattgtccctaaaa 15957873  T
Q  205 tgactatacatgttacaaatatgtttag 232  Q
    | |||||  |||||||||| ||||||||    
T  15957872 ttactatctatgttacaaacatgtttag 15957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 28083170 - 28083402
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttc--cttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttag 98  Q
    ||||||||||||||||||||||||  | |||| |||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||| |  |    
T  28083170 atggaattttggattttgaggggcatagtcccataagaatttttgcttctaagggagtcatggtccttgaattttttctgattttctggggaagtatcgg 28083269  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||| ||||   | |||||| |||||||||||||| |    
T  28083270 agcaatccgatcaagtagtccgaaaactcgattttttcctaagaacaggtaacaatgaccaaaaacagaaggatgaaagttagaaagattaatattgtcc 28083369  T
Q  199 ctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||||| |||||||||||||||||||    
T  28083370 ctaaaatgactatccatgttacaaatatgttta 28083402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 38692579 - 38692819
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttc-taagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagca 102  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||    
T  38692579 gaattttggattttgaggggcggagtcccgtaagaagtcccttcctaagggagtcatggtccttgaattttttctgattttttggggaagtttcggagca 38692678  T
Q  103 atccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaa 202  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || |   ||||||| ||| ||||||||||| | |||    
T  38692679 atccgaccaagtagtccgaaaacccgatttttgactaagaatgggtaacaatgacccaaaacagaaagatgagagttatgaatattaatattgtccttaa 38692778  T
Q  203 aatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||| ||| ||||||||||| |||||||| || |||||||    
T  38692779 aatgattatccatgttacaaacatgtttagaatttgtgctg 38692819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 243
Target Start/End: Complemental strand, 38871995 - 38871756
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaa 103  Q
    |||||||||||||| ||||||  | ||||||||||| |  |||||  |||||||| ||||||||||||||||||||||| ||||| ||||||  ||||||    
T  38871995 gaattttggattttaaggggcaaagtcccgtaagaagtctcttctttgggagtcacggtccttgaattttttctgattttctgggaaagtttcggagcaa 38871896  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||| |||||| ||||||    
T  38871895 tccgattaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattattattgtccctaaa 38871796  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||| ||||||||||| |||||||| || |||||||    
T  38871795 atgactatccatgttacaaacatgtttagaatttgtgctg 38871756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 31221137 - 31221363
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||||||| || |||||||| | ||||||| || ||||| ||||||||||||||||||||||| ||||||||||||  |||||||    
T  31221137 aattttggattttgaggggcggagtctcgtaagaagtcccttctatggaagtcacggtccttgaattttttctgattttctggggaagtttcggagcaat 31221236  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    |||||||||||| ||||||||||  ||||| |||||||||| ||||||||||||||||||| || |   ||||||||||||||||||||||| |||||||    
T  31221237 ccgatcaagtagcccgaaaacccagtttttaactaagaacatgtaacaatgacccaaaacagaaagatgagagttaggaagattaatattgtccctaaaa 31221336  T
Q  205 tgactatacatgttacaaatatgttta 231  Q
    ||||||| ||||||||||| |||||||    
T  31221337 tgactatccatgttacaaacatgttta 31221363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 32841765 - 32841995
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagagc 101  Q
    ||||||||||||||||||||||||||| |||| |||||| | ||||||| |||||||||| |||||||||||||||||||||   ||||| |||  ||||    
T  32841765 atggaattttggattttgaggggcggagtcccataagaagtcccttctaggggagtcatgatccttgaattttttctgattttctgggaattttcggagc 32841864  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt-cct 200  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| | ||||   |||||||||||||||||||||||| |||    
T  32841865 aatccgatcaagtagcccgaaaacccgatttttgactacgaacatgtaacaatgactcaaaatagaaggatgagagttaggaagattaatattgttccct 32841964  T
Q  201 aaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||| ||||||||||| |||||||    
T  32841965 aaaatgactatccatgttacaaacatgttta 32841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 33487938 - 33487695
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||| ||||||||  ||||  ||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||  |||    
T  33487938 atggaattttggatttttaggggcggggtcccaaaagaagtcccttctaagggagtcatgatccttgacttttttctgattttctggggaagtttcggag 33487839  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttcc 199  Q
    |||  ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |  ||||   ||||||||||||||||||||||| ||    
T  33487838 caaatcgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaaactgaaggatgagagttaggaagattaatattgtccc 33487739  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| || ||||| || |||||||    
T  33487738 taaaatgactatccatgttacaaacatttttagaatttgtgctg 33487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 7884522 - 7884289
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct--ggggaagttttag 98  Q
    |||| |||||| |||||||||||||||| | ||||||||| |  |||||| |||||||||||||||||||| |||||||||||    ||||||||||  |    
T  7884522 aatgaaattttagattttgaggggcggagttccgtaagaagtctcttctacgggagtcatggtccttgaatgttttctgattttataggggaagtttcgg 7884423  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| |    
T  7884422 agcaatccgatcaagtagcccgaaaatccgattcttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtcc 7884323  T
Q  199 ctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||| |||||| ||||||| || |||||    
T  7884322 ctaaaatgacaatacatattacaaacatatttag 7884289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 40619779 - 40620015
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||   ||||||||| |||||||||||||| ||| ||||| |||||||||  ||     
T  40619779 atggaattttggattttgaggggcggagtcccgtaagaagttccttcttttggagtcatgatccttgaattttttatgattttctagggaagtttcggaa 40619878  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgac----taagaacaggtaacaatgacccaaaacaaaaggta-aagagttaggaagattaatattg 195  Q
    |||||||| ||||||||||| ||||||||||||||||    |||||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  40619879 caatccgaccaagtagtccggaaacccgatttttgactaattaagaacaggtaacaatgacccaaaacagaagggatgagagttaggaagattaatattg 40619978  T
Q  196 ttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    | |||||||||| | | ||||||||||  ||||||||    
T  40619979 tccctaaaatgattgtccatgttacaagcatgtttag 40620015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 15799552 - 15799310
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||| ||| |||| |  ||| | ||||||| ||||| ||||||||||||||||||| |||||| ||||| ||||||  |||    
T  15799552 atggaattttggattttgaggggtggagtcccattggaagtcccttctaggggaggcatggtccttgaattttttttgattttctgggcaagtttcggag 15799453  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    || ||||||||| ||||||||| | |    
T  15799452 caatccggtcaagtagcccggaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgcgaattaggaagaataatattgtccat 15799353  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| |||||||| || |||||||    
T  15799352 aaaatgactatccatgttacaaacatgtttagaatttgtgctg 15799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27213031 - 27212806
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttaga 99  Q
    ||||||||||| |||||||||||||||| ||||||||||| | ||||||| ||||||||||| | |||||||||| ||||||| || ||||||| |  ||    
T  27213031 aatggaattttagattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggacgttgaattttt-ctgattttctagggaagtatcgga 27212933  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||   |||||||||||||||||||||||||     
T  27212932 gcaatccaatcaaatagtccgaaaacccgatttttgactaagaacaggtaacaatgactcaaaccagaaggatgagagttaggaagattaatattgttc- 27212834  T
Q  200 taaaatgactatacatgttacaaatatgttta 231  Q
        ||||||||  |||||||||| |||||||    
T  27212833 ----atgactatctatgttacaaacatgttta 27212806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26190115 - 26190265
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||| ||||||||||| ||| ||| ||||||||||| |||    
T  26190115 aatggaattttggattttgaggggcggagtcccttaagaagttccttctaggggagtcatggtcgttgaattttttttgattttttggggaagtttcaga 26190214  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaa 150  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26190215 gcaatccgatctagtagtccgaaaacccgatttttgactaagaacaggtaa 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 26898601 - 26898790
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctgggg-aagttttagagcaat 104  Q
    ||||||||||||||||||||||| ||| ||||||| | |||||||  ||||||||||||||||||||||||||||||| | ||| ||||||  |||||||    
T  26898601 aattttggattttgaggggcggagtcctgtaagaagtcccttctacaggagtcatggtccttgaattttttctgattttttgggcaagtttcggagcaat 26898700  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatatt 194  Q
    |||||||||||| |||||||| |||||||||||||||||||  |||||||||| ||||||| ||||   |||||||||||||||||||||    
T  26898701 ccgatcaagtagcccgaaaactcgatttttgactaagaacatataacaatgactcaaaacagaaggatgagagttaggaagattaatatt 26898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 38372628 - 38372395
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgat-ttctggggaagttttagag 100  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||  |||    
T  38372628 atggaattttggattttgaggggtggagtcccgtaagaagtctcttctaaggaagtcatggtccttgaattttttctgatcttctggggaagtttcggag 38372529  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    | |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||         ||     ||||||||||||||||||||||| |||    
T  38372528 cgatccgatcaagtagcccgaaaacccaatttttaactaagaacatgtaacaatgac--------gaattatgagagttaggaagattaatattgtccct 38372437  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||||||| ||||| ||||| |||||||| || ||||||    
T  38372436 aaaatgactatccatgtaacaaacatgtttagaatttgtgct 38372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 30 - 232
Target Start/End: Original strand, 24203505 - 24203709
Alignment:
Q  30 tcccgtaagaatttccttctaagggagtcatggtccttgaattttttc-tgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaaccc 127  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||| |||||| || |||||||||  ||||||||||||||| ||| |||||||| |    
T  24203505 tcccataagaagtcccttctaagggagtcatggtccttgaattttttcatgattttcttgggaagtttcggagcaatccgatcaaatagcccgaaaactc 24203604  T
Q  128 gatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatg 227  Q
     |||||| ||||||||||||||||||||| |||||||| |||||  ||||||||||| ||||||||||| | |||||||| ||| |  |||||||| |||    
T  24203605 aatttttaactaagaacaggtaacaatgatccaaaacagaaggttgagagttaggaacattaatattgtccttaaaatgattatcccagttacaaacatg 24203704  T
Q  228 tttag 232  Q
    |||||    
T  24203705 tttag 24203709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 4064593 - 4064756
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaa-aaggtaaagagtt 179  Q
    |||||||||||||||  ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||  | ||||   | ||||    
T  4064593 tttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaaatagaaggatgatagtt 4064692  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  4064693 aggaagattaacattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 4064756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 29862860 - 29862697
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagtt 179  Q
    ||||| |||||||||  ||||||||  ||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||| |  ||||   | ||||    
T  29862860 tttctagggaagtttcggagcaatcacatcaagtagcccgaaaacttgatttttgactaagaacaggtaataatgacccaaaaacggaaggatgaaagtt 29862761  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  29862760 aggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 29862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 12847687 - 12847528
Alignment:
Q  84 ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttagga 183  Q
    |||||||||||| |||| |||  |||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||| ||     |||||| |||    
T  12847687 ctggggaagtttcagagtaatatgatcaagtagcccgaaaactcgatttttgactaagaacagctaacaatgatccaaaacagaaatacgagagttggga 12847588  T
Q  184 agattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||| | |||||||| |||  |||||||||| ||||| || || |||||||    
T  12847587 agattaatattgtccataaaatgattatctatgttacaaacatgttcagaatttgtgctg 12847528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 13908778 - 13908645
Alignment:
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg-taaagagttaggaagattaatattgt 196  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||| |||||||||| ||||| | |||| | ||| |||| |||||||||||||||    
T  13908778 gagcaatccgatcaagtagtctgaaaacctgatttttgacaaagaacagctaacaatgactcaaaagagaaggatgaag-gttaagaagattaatattgt 13908680  T
Q  197 tcctaaaatgactatacatgttacaaatatgttta 231  Q
     | |||||||||||| | ||||||||| |||||||    
T  13908679 ccataaaatgactatccgtgttacaaacatgttta 13908645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 23269584 - 23269436
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    |||||||||||||||   |||||||||||||||||| ||||||||||||||||||| ||||||||  |||| || ||||| || | |||    |||||||    
T  23269584 tttctggggaagtttcgaagcaatccgatcaagtagcccgaaaacccgatttttgaataagaacatctaactataacccagaatagaagaatgagagtta 23269485  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||| | |||||||| | | ||||||||||| |||||    
T  23269484 ggaagattaatattgtccttaaaatgattgttcatgttacaaacatgtt 23269436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 26095350 - 26095188
Alignment:
Q  71 ttttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaag 169  Q
    ||||||||||||| ||||||||||||  |||||||| || ||||||| || |||||||||||||| ||| | |||||  ||||||||| ||||| | |||    
T  26095350 ttttttctgattttctggggaagtttcggagcaatctgaacaagtagcccaaaaacccgattttttactgaaaacagccaacaatgacacaaaatagaag 26095251  T
Q  170 gtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
        ||||||| ||||||||||||||| | ||| |||||||| ||||||||||| ||||||||    
T  26095250 aatgagagttaagaagattaatattgtccataatatgactatccatgttacaaacatgtttag 26095188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 27158411 - 27158183
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||||||| ||| ||| || ||  || | || || || ||||||| ||||| |||| |||||||| ||||||  |||    
T  27158411 atggaattttggattttgaggggcggaatccagtatgaagtttctcttacgagaatcttgatccttgattttttcctgattttctgggaaagtttcggag 27158312  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||| |||||||||| | |||||||  |||||| | ||| ||||  ||| ||||||||||||   ||||   ||  |||||||| |||||||||| | |    
T  27158311 caatctgatcaagtagcctgaaaaccgaattttttattaataacaactaataatgacccaaaagtgaaggatgaggattaggaagcttaatattgtcctt 27158212  T
Q  201 aaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||| |||||| |||| |||||    
T  27158211 aaaatgactatccatgtttcaaacatgtt 27158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 6800805 - 6800949
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaa 184  Q
    |||| ||||||  |||||||  ||||||||||| |||||||| ||||||||||||||||||  ||||||||||| |||||| ||||   ||| | |||||    
T  6800805 tgggcaagtttcggagcaatatgatcaagtagttcgaaaaccggatttttgactaagaacatctaacaatgacctaaaacagaaggatgagaatgaggaa 6800904  T
Q  185 gattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||  ||||| | |||||||||| | |||||| |||| |||||    
T  6800905 gattagcattgtccttaaaatgactgtccatgttgcaaacatgtt 6800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 40613514 - 40613697
Alignment:
Q  47 tctaagggagtcatggtccttgaattttttctgatttctgg-ggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaaca 145  Q
    ||||||||||||||| |||||   |||||||| |||| | | ||||||||  |||||||| ||||||||||  | |||||  ||||||| ||||||||||    
T  40613514 tctaagggagtcatgatccttattttttttcttattttttgaggaagtttcggagcaatctgatcaagtagctcaaaaactggatttttaactaagaaca 40613613  T
Q  146 ggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    | || |||||||| || ||| ||||   | ||||||||||||||||| ||| | |||||| | ||| ||||||||||| |||||    
T  40613614 gttagcaatgacctaatacataaggatgaaagttaggaagattaataatgtccttaaaataattatccatgttacaaacatgtt 40613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 26093786 - 26093620
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttga---attttttctga-tttctggggaagtttta 97  Q
    ||||||||||||||||||||||| ||| ||||||||||| | || |||| ||||||  || |||||||    |||||||||| ||| || ||||||||      
T  26093786 atggaattttggattttgaggggaggagtcccgtaagaagtcccctctacgggagttttgatccttgattttttttttctgattttgtgaggaagtttcg 26093687  T
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaac 164  Q
      |||||| | |||| ||| | |||||| | |||||||||||||||||  |||||||||||||||||    
T  26093686 aggcaatctgttcaaatagcctgaaaactcaatttttgactaagaacaactaacaatgacccaaaac 26093620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 8738952 - 8739007
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  8738952 agagttaggaagattaatattgttcttaaaatgactatccatgttacaaacatgtt 8739007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 27494123 - 27494178
Alignment:
Q  177 gttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  27494123 gttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgtttag 27494178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 26190264 - 26190334
Alignment:
Q  173 aagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||| ||| | | ||||||| |||||||||||||||||||||||||||| |||||||    
T  26190264 aagagttaggaatattaaaattatccttaaaatggctatacatgttacaaatatgtttaggatttgtgctg 26190334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 8739079 - 8739132
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  8739079 gaattttggattttgaggggcggagtcccgtaataagttccttctaagggagtc 8739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21070693 - 21070465
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttaga 99  Q
    ||||||||||||||||||||||||| |  |||  |||||| | ||||||| ||||||| ||   ||||| |||||  |||||| | ||||||||||   |    
T  21070693 aatggaattttggattttgaggggcagtgtccaataagaagtcccttctaggggagtcttgactcttgattttttcttgattttttggggaagtttcgaa 21070594  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttg---actaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgt 196  Q
    ||||||| |||||||||   ||||||| |||||||    ||||| ||||| |||||||||    ||| ||| ||   || |||| |||||||||||||||    
T  21070593 gcaatccaatcaagtagcatgaaaaccggatttttttttactaaaaacagctaacaatga----aaataaatggatgagggttatgaagattaatattgt 21070498  T
Q  197 tcctaaaatgactatacatgttacaaatatgtt 229  Q
     | ||||||||||||  ||||||||||||||||    
T  21070497 ccttaaaatgactatctatgttacaaatatgtt 21070465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 26622357 - 26622298
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaa 140  Q
    |||||| ||||||||  |||||||| |||||||||||||||||||| |||||||||||||    
T  26622357 tttctgaggaagtttcggagcaatctgatcaagtagtccgaaaaccggatttttgactaa 26622298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 33901200 - 33901094
Alignment:
Q  87 gggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaaga 186  Q
    |||||||||  |||||||| |||||| ||||| ||||| |  |||||||||||| ||||  ||||||||||| |||| | ||||  | ||||||||||||    
T  33901200 gggaagtttcggagcaatctgatcaaatagtctgaaaatcaaatttttgactaaaaacaactaacaatgacctaaaagagaaggatatgagttaggaaga 33901101  T
Q  187 ttaatat 193  Q
    |||||||    
T  33901100 ttaatat 33901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 8739155 - 8739210
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | |||||||||||  ||||||||||| |||||    
T  8739155 agagttaggaagattaatattgtccttaaaatgactacccatgttacaaacatgtt 8739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 27493919 - 27493970
Alignment:
Q  177 gttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgt 228  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  27493919 gttaggaagattaatattgtttttaaaatgactatccatgttacaaacatgt 27493970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 28445176 - 28445231
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||||||||| |||||    
T  28445176 agagttaggaagattaatattgtccttaaaacgaccatacatgttacaaacatgtt 28445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 25747168 - 25747110
Alignment:
Q  185 gattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| |||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  25747168 gattaatgttgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 25747110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 16429450 - 16429381
Alignment:
Q  160 aaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||| ||||  ||||||| |||||||||||||||| | ||||| |||||| ||||||||||| |||||    
T  16429450 aaaacacaaggataagagtttggaagattaatattgtccttaaaacgactattcatgttacaaacatgtt 16429381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 34530367 - 34530314
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||| |||||    
T  34530367 agttaggaagattaatattgtccttaaaatgactaaccatgttacaaacatgtt 34530314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 5456379 - 5456327
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    |||||||||||||||| |||||| ||||||||||| | ||||||||| |||||    
T  5456379 aattttggattttgagaggcggagtcccgtaagaaatcccttctaagtgagtc 5456327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 16429302 - 16429250
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||| ||||||||||||||| ||||||||||| | |||||||||| ||||    
T  16429302 aattttgaattttgaggggcggagtcccgtaagaagtcccttctaaggtagtc 16429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 8973576 - 8973631
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||| |||||||||| | |||||||| ||| ||||||||||| |||||    
T  8973576 agagttaggaaggttaatattgtccttaaaatgattatccatgttacaaacatgtt 8973631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 31561767 - 31561656
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaat 104  Q
    ||||||||||||||||| | | | ||||||||||| || |||||| ||||||| ||||||||   ||| || ||| |||||||| ||||||  ||| |||    
T  31561767 aattttggattttgaggagtgaagtcccgtaagaagtttcttctacgggagtcttggtccttttttttcttttgattttctgggaaagtttcggagtaat 31561668  T
Q  105 ccgatcaagtag 116  Q
    | ||||||||||    
T  31561667 ctgatcaagtag 31561656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 4650244 - 4650194
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||||| || ||||||||| ||||| ||||| |||||    
T  4650244 taggaagattaatattgttcttacaatgactatccatgtgacaaacatgtt 4650194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 28445381 - 28445427
Alignment:
Q  183 aagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||| | |||||||||||| ||||||||||| |||||    
T  28445381 aagattaatattgtccttaaaatgactatccatgttacaaacatgtt 28445427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 38641083 - 38641033
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  38641083 taggaagattaatattgtccttaaaatgactatctatgttacaaacatgtt 38641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 43387954 - 43388009
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||||||||||||||| || |||| ||||||||||| | | |||||||||||||    
T  43387954 atggaattttggattttga-ggacggagtcccgtaagaagtcctttctaagggagtc 43388009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 31519687 - 31519928
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttaga 99  Q
    ||||||||||||||||||||||||  || ||||||||||  | ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||    
T  31519687 aatggaattttggattttgagggg--gagtcccgtaagacgtcccttctaagggtgtcatggtccttgaattttttctgattttatggggaagtttcaga 31519784  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||  | |||||||||||||||||||||| ||    
T  31519785 gcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgaccaaaaacaaaaggatacgagttaggaagattaatattgtccc 31519884  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||| ||||||||||||||| ||| |||||||| |||||||    
T  31519885 taaaatggctatacatgttacaattatatttaggatttgtgctg 31519928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 8885246 - 8885489
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||||||||||||| ||| ||||||| | ||||||| ||||||||||||||||||||||||| ||||||| ||||| | ||||  ||    
T  8885246 atggaattttggattttgaggggcggagtcctgtaagaagtcccttctacgggagtcatggtccttgaatttttttctgattttctgggaatgtttcgga 8885345  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||   ||||||||||||||||||||||| ||    
T  8885346 gcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaataacccaaaacagaaggatgagagttaggaagattaatattgtccc 8885445  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||| ||||||||||| |||||||| || |||||||    
T  8885446 taaaatgactatccatgttacaaacatgtttagaatttgtgctg 8885489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 28917141 - 28916898
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttaga 99  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  28917141 aatggaattttggattttgaggggcggagtcccataagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcgga 28917042  T
Q  100 gcaatccgatcaagtagtccgaaaacccga-tttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||||||||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||||| ||||   |||||||| |||||||||||||| |    
T  28917041 gcaatccgatcaagtagt-cgaaaacccgatttttttaccaagaacatgtaacaatgacccaaaacagaaggatgagagttagaaagattaatattgtcc 28916943  T
Q  199 ctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||| ||||| ||||| |||||||| || |||||||    
T  28916942 ctaaaatgactatccatgtaacaaacatgtttagaatttgtgctg 28916898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 42280685 - 42280915
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||| ||||||| | ||||||| |||||| |||||||||||| ||||| |||||| ||||||||||||   ||    
T  42280685 atggaattttggattttgaggggcggagtcctgtaagaagtcccttctaggggagttatggtccttgaactttttttgattttctggggaagtttcgaag 42280784  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
     |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  42280785 taatccgatcaagtagtccaaaaatccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 42280884  T
Q  201 aaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||||| ||||||||||| |||||||    
T  42280885 aaaatgactatgcatgttacaaacatgttta 42280915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 11698110 - 11698341
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||  | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  11698110 atggaattttggattttgaggggcggagtcccgtaagacgtcccttctatgggagtcatggtccttgaattttttctgattttctggggaagtttcggag 11698209  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||  ||||   ||||||||||||||||||||| | |||    
T  11698210 cattccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgaccaaaaacggaaggatgagagttaggaagattaatattatccct 11698309  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||| ||||||| ||| ||| ||||    
T  11698310 aaaatgactatccatgttaaaaacatgcttag 11698341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 34853693 - 34853451
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagag 100  Q
    ||||||||||  ||||||||||||||| ||||  ||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||||  |||    
T  34853693 atggaattttttattttgaggggcggagtcccagaagaagtcctttctaagggagtcatggtccttgaattttttctgattttatggggaagtttcggag 34853594  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||    
T  34853593 caatccgatcaagtaatccgaaaactcgatttctgcctaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccct 34853494  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| || ||||| || |||||||    
T  34853493 aaaatgactatccatgttacaaacatttttagaatttgtgctg 34853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 3095046 - 3094808
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    ||||||||||||||||||| ||| || |||||| | | ||| ||| ||||||||||||||||||||||||| |||||| ||||| ||||||  |||||||    
T  3095046 aattttggattttgaggggtggagtcgcgtaagtagtccctcctatgggagtcatggtccttgaattttttatgattttctgggcaagtttcggagcaat 3094947  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| | |||||    
T  3094946 ccgatcaagtagtccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccataaaa 3094847  T
Q  205 tgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||| ||| ||||||||||| |||||||| || |||||||    
T  3094846 tgattatccatgttacaaacatgtttagaatttgtgctg 3094808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 40328256 - 40328031
Alignment:
Q  9 tttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttagagcaatcc 106  Q
    |||||||||||||||||||| ||||||||||| || ||| || |||||||||| |||||||||||||| ||||||| || |||||||||| |||||||||    
T  40328256 tttggattttgaggggcggagtcccgtaagaagtttcttttacgggagtcatgatccttgaatttttttctgattttctagggaagttttggagcaatcc 40328157  T
Q  107 gatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |   ||||||||||||||||||||| | | |||||||    
T  40328156 gatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaataacccaaaacagaaagatgagagttaggaagattaatattatccataaaatg 40328057  T
Q  207 actatacatgttacaaatatgtttag 232  Q
    || || ||||||||||| ||||||||    
T  40328056 acaatccatgttacaaacatgtttag 40328031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 14163851 - 14164093
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||  ||||||||||||||| ||||||||||| ||  || |||||||| |||||||||||||||||||||||||| ||||||| ||||  |||    
T  14163851 atggaattttttattttgaggggcggagtcccgtaagaagttatttataagggagccatggtccttgaattttttctgattttctggggaggtttcggag 14163950  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||| |||||||||||  |||||||| |  ||||||||||||||||||||||||||||| |||||| ||||   ||||||||||| ||||||||||| |||    
T  14163951 caaaccgatcaagtaccccgaaaacgcagtttttgactaagaacaggtaacaatgaccaaaaacagaaggatgagagttaggaaaattaatattgtccct 14164050  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||||||||||| |||||||| || |||||||    
T  14164051 aaaatgactatccatgttacaaacatgtttagaatttgtgctg 14164093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 54 - 243
Target Start/End: Original strand, 27927787 - 27927977
Alignment:
Q  54 gagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaaca 152  Q
    ||||||||||||||||||||||||||||||  |||||||||||  |||||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  27927787 gagtcatggtccttgaattttttctgattttatggggaagtttcggagcaatctgatcaagtagtccgaaaacccaatttttaactaagaacaggtaaca 27927886  T
Q  153 atgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||| ||||   |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||| || |||||||    
T  27927887 atgacccaaaacagaaggatgagagttaggaagattaatattgtctctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 27927977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 9073815 - 9073628
Alignment:
Q  56 gtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 154  Q
    |||||| ||||||||||||||||||||| ||| ||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  9073815 gtcatgctccttgaattttttctgattttctgaggaagtttcggagcaatccaatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaat 9073716  T
Q  155 gacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgct 242  Q
    ||||||||||| ||||   ||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || ||||||    
T  9073715 gacccaaaacataaggatgagacttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgct 9073628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 243
Target Start/End: Complemental strand, 44106585 - 44106346
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaa 103  Q
    ||||||||||||||||||| | || |||| ||||||    ||||||||||||||||||||||||| |||||| | ||||  ||||||||||| |||||||    
T  44106585 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgattttttttttattttatggggaagtttcagagcaa 44106486  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    || ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| ||||   ||||||||||||||||||||||| | |  |    
T  44106485 tcagatcaagtagcacgaaaacccgatttttgactaagaacaggtaacaatgactcaaaacagaaggatgagagttaggaagattaatattgtccatgga 44106386  T
Q  204 atgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||| ||||||||||| |||||||| || |||||||    
T  44106385 atgactatccatgttacaaacatgtttagaatttgtgctg 44106346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 21004695 - 21004515
Alignment:
Q  56 gtcatggtccttgaattttttctgatttct--ggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaa 153  Q
    |||||||||||||||||||| ||||||| |  || ||||||| ||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||    
T  21004695 gtcatggtccttgaattttt-ctgatttttttggagaagtttcagagcaatctgatcaagtagccggaaaacccgatttttgactaagaacatgtaacaa 21004597  T
Q  154 tgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggat 235  Q
    |||||||||||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  21004596 tgacccaaaacaaaaggataagagttatgaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 21004515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 17119678 - 17119915
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttc-tggggaagttttagagcaat 104  Q
    ||||||||||||||||||| |    |||||||||| |  |||||| |||||| ||| ||||||| |||||||| ||||| |||||||||||  ||| |||    
T  17119678 aattttggattttgaggggtgttg-cccgtaagaagtatcttctacgggagtaatgatccttgatttttttctaatttcctggggaagtttcggagaaat 17119776  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||||||||| | |||||    
T  17119777 ccaatcaagtagtccgaaaacccggtttttgactaagaacaggtaacaatgatccaaaacagaaggatgagagttaggaagattaatattgtccgtaaaa 17119876  T
Q  205 tgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||| || ||||||||||| || ||||| || |||||||    
T  17119877 tgacaatccatgttacaaacatatttagaatttgtgctg 17119915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 231
Target Start/End: Original strand, 36165681 - 36165862
Alignment:
Q  52 gggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaa-cccgatttttgactaagaacaggta 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| || |||| |||| ||||| |||||||||| |||    
T  36165681 gggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaatccgatcaagtagcccaaaaaacccggtttttaactaagaacatgta 36165780  T
Q  150 acaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    |||||||||||||||| ||||   ||||||| |||||||||||||||  ||||||| ||||| ||||||||||| |||||||    
T  36165781 acaatgacccaaaacagaaggatgagagttaagaagattaatattgtctctaaaataactatccatgttacaaacatgttta 36165862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 36980934 - 36980706
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||| |||||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||| || ||||||| ||||| ||||||| ||| ||||||||  |||    
T  36980934 atgggattttgaattttgaggagcggagtcctgtaagaagtcccttctaggggagtcttgatccttgattttttcctgattttctgtggaagtttcggag 36980835  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||| | ||||  ||||||||| ||||| |||||||| | |    
T  36980834 caatccgatcaagtagcccgaaaatcggatttttgactaagaatagctaacaatgacccaaaatagaaggataagagttagaaagatcaatattgtcctt 36980735  T
Q  201 aaaatgactatacatgttacaaatatgtt 229  Q
    ||||||| ||| ||||||||||| |||||    
T  36980734 aaaatgattatccatgttacaaacatgtt 36980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 40392815 - 40392659
Alignment:
Q  87 gggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaaga 186  Q
    |||||||||  ||| |||||||||||||||   ||||||  ||||||||||||||||||  ||||||||||||||| || || |  ||||||||||||||    
T  40392815 gggaagtttcggagaaatccgatcaagtagcttgaaaacttgatttttgactaagaacaactaacaatgacccaaatcataaagataagagttaggaaga 40392716  T
Q  187 ttaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||| | |||||||||||| ||||||||||| |||||||| || |||||||    
T  40392715 ttaatattgtccataaaatgactatccatgttacaaacatgtttagaatttgtgctg 40392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 6395446 - 6395227
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaa 103  Q
    ||||||||||||||||||||| |  || |||||||| |  ||||||  |||||| |  | ||||| ||| ||||||||| | ||||| |||| ||| |||    
T  6395446 gaattttggattttgaggggcagcgtcacgtaagaaatctcttctacaggagtcttaatacttgattttgttctgattttcaggggatgtttcagaacaa 6395347  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    ||||||||||||| ||||||| | |||||||||||| |||||| ||||||||||| |||||| |||    |||||||||||| |||||||||| | ||||    
T  6395346 tccgatcaagtagcccgaaaatcagatttttgactacgaacagctaacaatgacctaaaacagaagaatgagagttaggaagtttaatattgtccataaa 6395247  T
Q  204 atgactatacatgttacaaa 223  Q
    |||| ||| |||| ||||||    
T  6395246 atgaatatccatgctacaaa 6395227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34645744 - 34645520
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttga-atttttt--ctgatttctggggaagtttta 97  Q
    ||||||||||| ||||  |||| ||||| ||||||||||| ||| ||||||||| ||| || ||||||| |||||||  ||||||| |||||||  |||     
T  34645744 aatggaattttagatt--gaggtgcggagtcccgtaagaagttcattctaagggtgtcttgatccttgatatttttttcctgatttttggggaaaatttc 34645647  T
Q  98 g-agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgt 196  Q
    | ||||||  |||||||||| ||||||||| ||| |||||||||||||| |||||||||| |||||||| ||||   |||||||| || ||||| ||| |    
T  34645646 ggagcaatgtgatcaagtagcccgaaaaccggatgtttgactaagaacatgtaacaatgatccaaaacagaaggatgagagttagaaaaattaaaattat 34645547  T
Q  197 tcctaaaatgactatacatgttacaaa 223  Q
     | ||||||||||||  ||||||||||    
T  34645546 ccttaaaatgactatctatgttacaaa 34645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 36318161 - 36317938
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||  ||||||||||| ||| || | |||||| |   |||||||| |||| || ||||||  ||||| || |||| ||||| ||||||| ||     
T  36318161 atggaattttaaattttgaggggtggagtctcataagaagtcatttctaaggtagtcttgatccttgtttttttcctaattttctgggaaagttttggaa 36318062  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    | |||||||||||||| ||||||| |  |||| ||||||||||||| ||||||||||||||||   || |  ||||||||| |||||||||||||| | |    
T  36318061 ctatccgatcaagtagcccgaaaatcgaatttctgactaagaacagctaacaatgacccaaaattgaaagataagagttagaaagattaatattgtcctt 36317962  T
Q  201 aaaatgactatacatgttacaaat 224  Q
    ||||||| ||| ||||||||||||    
T  36317961 aaaatgattatccatgttacaaat 36317938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 28423785 - 28423555
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttga-attttttctgattt-ctggggaagttttagag 100  Q
    |||||||||||||||||||||  ||| |||| |||||| | | ||||| ||||||| || ||||||| ||||||| | |||| ||||  ||||||  |||    
T  28423785 tggaattttggattttgagggatggagtcccataagaagtcctttctacgggagtcttgatccttgatattttttttaattttctggctaagtttcggag 28423686  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
     ||||||||||||||| ||||||| |  |||||||||||||||||  | |||||||| ||||| | ||||   |||||||||||||||||||||||   |    
T  28423685 taatccgatcaagtagcccgaaaaactaatttttgactaagaacaact-acaatgacgcaaaatagaaggatgagagttaggaagattaatattgtctgt 28423587  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||   || ||||||||||| ||||||||    
T  28423586 aaaatgttcatccatgttacaaacatgtttag 28423555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 16310791 - 16310722
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  16310791 agagttaggaagattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatttgtgctg 16310722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 1076822 - 1076690
Alignment:
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||| ||||||||| ||||||| | |||||||||| |||||||  |||||||||  |||||||||| |   |||| || ||||||||||||||| |    
T  1076822 agcaatccaatcaagtagcccgaaaatcagatttttgaccaagaacaactaacaatgatgcaaaacaaaatgatgagagctatgaagattaatattgtcc 1076723  T
Q  199 ctaaaatgactatacatgttacaaatatgttta 231  Q
     |||||||  ||| ||||||||||| |||||||    
T  1076722 ataaaatggatattcatgttacaaacatgttta 1076690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 40994983 - 40994915
Alignment:
Q  175 gagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  40994983 gagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 40994915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 4259528 - 4259671
Alignment:
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgtt 197  Q
    |||||| |||||| ||||| ||||||||| || |||||||||||||||  ||||||||| | |||| ||  ||   | |||||||||||||||||||||     
T  4259528 gagcaagccgatctagtagcccgaaaaccagagttttgactaagaacaactaacaatgatcgaaaagaa--ggatgatagttaggaagattaatattgtc 4259625  T
Q  198 cctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    | ||||||||||||  |||||||||| ||| |||| || |||||||    
T  4259626 cataaaatgactatcaatgttacaaacatgcttagaatttgtgctg 4259671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 10840547 - 10840687
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttt-----ttctga-tttctggggaagttt 95  Q
    |||| |||||| ||||||||||| ||| |||||||||||| |||||||| |||||||||| ||||||  ||||     |||||| |||||||||||||||    
T  10840547 atgggattttgaattttgaggggtggagtcccgtaagaatatccttctacgggagtcatgatccttggtttttttttcttctgattttctggggaagttt 10840646  T
Q  96 tagagcaatccgatcaagtag-tccgaaaacccgatttttga 136  Q
      |||||| | |||||||||| |||||||||| |||||||||    
T  10840647 cggagcaa-ctgatcaagtagatccgaaaacctgatttttga 10840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 37248750 - 37248681
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||    
T  37248750 agagttaggaagattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatttgtgctg 37248681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 7981881 - 7981651
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt--ctga-tttctggggaagttttag 98  Q
    ||||||||||||||||||||||||| | |||  ||| || | ||||||||||||||| || | ||||| ||||||  |||| |||| | ||||||||       
T  7981881 atggaattttggattttgaggggcgaagtcctataacaaatcccttctaagggagtcttgatgcttgattttttttcctgattttcggaggaagtttcga 7981782  T
Q  99 agcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||||||||||||||| | |||||    |||||| | ||| ||||  ||||||| |||||||||| ||||   || ||||||||  |||| ||||| |    
T  7981781 agcaatccgatcaagtagcctgaaaattgcatttttaattaataacaactaacaataacccaaaacagaaggatgagggttaggaaacttaacattgtcc 7981682  T
Q  199 ctaaaatgactatacatgttacaaatatgtt 229  Q
     |||||| | ||| ||||||||||| |||||    
T  7981681 ttaaaataaatatccatgttacaaacatgtt 7981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 31234486 - 31234540
Alignment:
Q  175 gagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  31234486 gagttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgtt 31234540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 9845378 - 9845323
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  9845378 agagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 9845323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 33472263 - 33472208
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  33472263 agagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 33472208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 10833468 - 10833537
Alignment:
Q  160 aaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||   | ||||||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  10833468 aaaacaaaaggatgaaagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 10833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 33472468 - 33472415
Alignment:
Q  176 agttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  33472468 agttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 33472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 1374216 - 1374083
Alignment:
Q  90 aagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagatta 189  Q
    ||||||| |||||||  |||||||||||| |||| ||  |||||||| | | ||||  ||||||||||| |||||| ||||   |||||||| | |||||    
T  1374216 aagttttggagcaatttgatcaagtagtctgaaatccaaatttttgaatgaaaacaactaacaatgacctaaaacataaggatgagagttagaatgatta 1374117  T
Q  190 atattgttcctaaaatgactatacatgttacaaa 223  Q
    |||| |||| |||  ||||||| ||| |||||||    
T  1374116 atatagttcttaatctgactatccatattacaaa 1374083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 24627761 - 24627717
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaa 223  Q
    |||||||||||||||||| | |||||||||||| |||||||||||    
T  24627761 taggaagattaatattgtccttaaaatgactatccatgttacaaa 24627717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 4259479 - 4259514
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaa 40  Q
    |||||||||||||||||||||||| |||||||||||    
T  4259479 gaattttggattttgaggggcggagtcccgtaagaa 4259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 7982570 - 7982515
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||| |||||||||||||||| | ||||||||||||  |||||||||| |||||    
T  7982570 agagttgggaagattaatattgtccttaaaatgactatttatgttacaaacatgtt 7982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40995035 - 40994980
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagt 57  Q
    |||||||||||||||||||| |||||| |||||||| || | ||||||| ||||||    
T  40995035 atggaattttggattttgagaggcggagtcccgtaataaatcccttctacgggagt 40994980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 41530862 - 41530812
Alignment:
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||||||||||||||| | | |||||||||| ||||||||||| |||||    
T  41530862 taggaagattaatattgtccttgaaatgactatccatgttacaaacatgtt 41530812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 8621528 - 8621593
Alignment:
Q  98 gagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa 163  Q
    |||||||||||||||||||  | ||||   ||||||||||||||||||  ||||||||||| ||||    
T  8621528 gagcaatccgatcaagtagctcaaaaattggatttttgactaagaacaactaacaatgacctaaaa 8621593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41530947 - 41530891
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    |||| |||||||||||||||||| |||| ||||||||||| |  ||||||||||||||    
T  41530947 aatgcaattttggattttgaggg-cggagtcccgtaagaagtctcttctaagggagtc 41530891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 33472338 - 33472286
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtc 58  Q
    ||||||| ||||||||||||| | ||||||||||| |  ||||||||||||||    
T  33472338 aattttgaattttgaggggcgtagtcccgtaagaagtctcttctaagggagtc 33472286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 140844 - 140620
Alignment:
Q  9 tttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttagagcaatcc 106  Q
    |||||||||||||||||| | ||||||||||| | |||| || ||||||||||||||||||||||||| ||||||| ||||||||||||  |||||||||    
T  140844 tttggattttgaggggcgaagtcccgtaagaagtcccttttatgggagtcatggtccttgaatttttttctgattttctggggaagtttcggagcaatcc 140745  T
Q  107 gatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatg 206  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||   ||||||||||||||||||||||| |||||||||    
T  140744 gatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacctaaaacaaaaggatgagagttaggaagattaatattgtccctaaaatg 140645  T
Q  207 actatacatgttacaaatatgttta 231  Q
    |||||  |||||||||| |||||||    
T  140644 actatcaatgttacaaacatgttta 140620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 4508096 - 4508338
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    ||||||||||||||||||||||||||| |||| |||||| |  |||||  ||||||||||||||||||||| |||||||||| ||| ||||||||  |||    
T  4508096 atggaattttggattttgaggggcggagtcccttaagaagtctcttctgtgggagtcatggtccttgaattgtttctgattttctgcggaagtttcggag 4508195  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||   | ||||||||||||||||||||| |||    
T  4508196 caatccaatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgaaagttaggaagattaatattgtccct 4508295  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||| ||| ||||||| |||||||| || |||||||    
T  4508296 aaaatgactatccatattacaaacatgtttagaatttgtgctg 4508338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 2539813 - 2539588
Alignment:
Q  5 gaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaa 103  Q
    |||||||||||||||||||||||| ||||||||||| |  |||||| | |||||||||||||||||||||||||||||| ||||| ||||||  ||||||    
T  2539813 gaattttggattttgaggggcggagtcccgtaagaagtcacttctatgagagtcatggtccttgaattttttctgattttctgggcaagtttcggagcaa 2539714  T
Q  104 tccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaa 203  Q
    |||||||||||||||||||||| || ||||| |||| ||| ||||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||||    
T  2539713 tccgatcaagtagtccgaaaactcggtttttaactacgaataggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccctaaa 2539614  T
Q  204 atgactatacatgttacaaatatgtt 229  Q
    |||||||| ||||||||||| |||||    
T  2539613 atgactatccatgttacaaacatgtt 2539588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 21514825 - 21515057
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgatttc-tggggaagttttaga 99  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||| |||||||||||||| || ||||  |||||||||||  ||    
T  21514825 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctaagggagt-atgatccttgaatttttttctaattttatggggaagtttcgga 21514923  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||   ||||||||||||||||||||||| ||    
T  21514924 gcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaggtaacaatgacccaaaggagaaggatgagagttaggaagattaatattgtccc 21515023  T
Q  200 taaaatgactatacatgttacaaatatgtttagg 233  Q
    |||||||||||| ||||||||||| || ||||||    
T  21515024 taaaatgactatccatgttacaaacatatttagg 21515057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 2813020 - 2813250
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt--ctgattt-ctggggaagttttagagca 102  Q
    ||||||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||||||||||  ||||||| ||||||||||||  |||||    
T  2813020 aattttggattttgaggggtggagtcccataagaagtccattctaagggagtcatggtccttgaattttttttctgattttctggggaagtttcggagca 2813119  T
Q  103 atccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||   ||||||||||||||||||||| | | ||    
T  2813120 atccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaacggaaggatgagagttaggaagattaatattatccata 2813219  T
Q  202 aaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||| ||||||| ||||||||||||    
T  2813220 aaatgactattcatgttaaaaatatgtttag 2813250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 3717077 - 3717308
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttct-ggggaagttttagagc 101  Q
    |||||||||||||||||||||||||| ||||||||||| |  |||||| ||||| |||||||||||||||||||||||||| | ||||| ||||  ||||    
T  3717077 tggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagccatggtccttgaattttttctgattttttggggatgtttcggagc 3717176  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||   |||||||| || ||||||||||| |||    
T  3717177 aatccgatcaagtagtctgaaaacccgatttttgactaagaacatgtaacaatgacccaaaaacagaaggatgagagttagaaaaattaatattgtccct 3717276  T
Q  201 aaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||||| ||||||||| | ||||||||    
T  3717277 aaaatgactatccatgttacagacatgtttag 3717308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 5639226 - 5638985
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaa-gttttagag 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||||||||||||| ||||||| | ||||| |||| ||||    
T  5639226 atggaattttggattttgaggggcggagtcccgtaagaagtctcttctaaaggagtcatggtccttgaattttt-ctgattttttgggaaagtttcagag 5639128  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||| || ||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||| |||    
T  5639127 caatctgaccaagtagcccggaaacccgatttttgattaagaacaggtaacaatgactcaaaacaaaaggataagagttaagaagattaatattgtccct 5639028  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    | |||| ||||| |||||||| | ||||||| ||| |||||||    
T  5639027 agaatggctatatatgttacagacatgtttatgatatgtgctg 5638985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 14587354 - 14587594
Alignment:
Q  1 aatggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgatttctggggaagttttagag 100  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||   |||||||||   ||    
T  14587354 aatggaattttggattttgagtggcggagtcccgtaagaagttccttctaagggagtcttggtccttgaattttttctaattttctgggaagtttcgaag 14587453  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    |||||| ||||||||| || |||| ||  ||||| |||||||||| ||||||||||||||||||| ||||   ||||||||||||||||||||||| | |    
T  14587454 caatccaatcaagtagcccaaaaatccatttttttactaagaacatgtaacaatgacccaaaacataaggattagagttaggaagattaatattgtccgt 14587553  T
Q  201 aaaatgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    ||||||||||| ||||||||||| |||||||| || |||||    
T  14587554 aaaatgactatccatgttacaaacatgtttagaatttgtgc 14587594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 17264770 - 17264533
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaat 104  Q
    |||||||||||||||||| || | ||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||  |||||||    
T  17264770 aattttggattttgagggacgaagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttt-ctgattttctggggaagtttcggagcaat 17264672  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaa 204  Q
    || ||||||||| || ||||| | |||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| |||||||| |||||||    
T  17264671 cccatcaagtagcccaaaaactcaatttttaactaagaacaggtaacaatgacgcaaaacagaaggatgagagttaggaagataaatattgtccctaaaa 17264572  T
Q  205 tgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||  |||||| |||| |||||||| || |||||||    
T  17264571 tgactaaccatgttgcaaacatgtttagaatttgtgctg 17264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 243
Target Start/End: Original strand, 24604156 - 24604397
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagc 101  Q
    ||||||||||||||||||| |||||| | ||| ||||| | |||||||||||||||||| |||||||||||||| | |||| || |||| ||||   |||    
T  24604156 tggaattttggattttgagaggcggagttccgcaagaagtcccttctaagggagtcatgatccttgaatttttttttattttctagggatgtttagaagc 24604255  T
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||  |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| ||||   | |||||||||||||||||||||  |||    
T  24604256 aatgtgatcaagtagcccaaaaacccgatttttgactaagaacaggtaacaatgactcaaaacagaaggatgaaagttaggaagattaatattgtctcta 24604355  T
Q  202 aaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||   |||||||||||||||||| || |||||||    
T  24604356 aaatgactatctttgttacaaatatgtttagaatttgtgctg 24604397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 5699861 - 5699699
Alignment:
Q  72 tttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgaccc-aaaacaaaag 169  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||    
T  5699861 tttttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaatcccgatttttgactaagaataggtaacaatgacccaaaaacagaag 5699762  T
Q  170 gtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |   ||||||| ||||||||||||||| | |||||||||||| ||||||||||| || |||||    
T  5699761 gatgagagttatgaagattaatattgtccttaaaatgactatccatgttacaaacatatttag 5699699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 29519634 - 29519402
Alignment:
Q  8 ttttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatcc 106  Q
    |||||||||||||| || ||| ||||  ||||| || ||||| |||||||   ||||||||||| ||||||||||| ||| ||||||||  |||||||      
T  29519634 ttttggattttgagaggaggagtccca-aagaagtttcttcttagggagt---ggtccttgaatattttctgattttctgaggaagtttcggagcaattt 29519539  T
Q  107 gatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatg 206  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| | ||||   | ||||||||||||||||||| | | |||||||    
T  29519538 gatcaagtagctcgaaaacccgatttttgaccaagaacacgtaacaatgacccaaaatagaaggatgatagttaggaagattaatattttccataaaatg 29519439  T
Q  207 actatacatgttacaaatatgtttaggatctgtgctg 243  Q
    || || ||||||||||| |||||||| || |||||||    
T  29519438 acaattcatgttacaaacatgtttagaatttgtgctg 29519402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 9905392 - 9905249
Alignment:
Q  89 gaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagatt 188  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||| ||||  |||||| ||||| |||    
T  9905392 gaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaattggtaacaatgactcaaaacagaaggataagagtaaggaaaatt 9905293  T
Q  189 aatattgtt-cctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||||| |||||||||| ||| ||||||||||| |||||||    
T  9905292 aatattgttccctaaaatgattatccatgttacaaacatgttta 9905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 23407082 - 23406919
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa-caaaaggtaaagagtt 179  Q
    |||||||||||||||  ||||||||  ||||||||| ||||||||  |||||||||||||||||| |||| |||||||||||| |  ||||   ||||||    
T  23407082 tttctggggaagtttcggagcaatcaaatcaagtagcccgaaaacttgatttttgactaagaacaagtaataatgacccaaaaacggaaggatgagagtt 23406983  T
Q  180 aggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  23406982 aggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 23406919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 32044638 - 32044537
Alignment:
Q  110 caagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcctaaaatgact 209  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  32044638 caagtagcccgaaaacctgatttttgactaagaacaggtaacaatgatccaaaacaaaaggataagagttaggaagattaatattgtccctaaaatgact 32044539  T
Q  210 at 211  Q
    ||    
T  32044538 at 32044537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 1945423 - 1945564
Alignment:
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcc 199  Q
    ||||||||||||| ||  ||||||| ||||||||||| ||| |||||||||||||| ||||||||| ||||   ||||||||||||||||||||| | ||    
T  1945423 gcaatccgatcaaataacccgaaaatccgatttttgaataaaaacaggtaacaatgtcccaaaacagaaggatgagagttaggaagattaatattatccc 1945522  T
Q  200 taaaatgactatacatgttacaaatatgtttaggatctgtgc 241  Q
    |||||||||||| ||||||||||| |||||||| || |||||    
T  1945523 taaaatgactatccatgttacaaacatgtttagaatttgtgc 1945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 13800901 - 13801052
Alignment:
Q  81 tttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagtta 180  Q
    ||||| || ||||||  |||||||||||||||||||| | |||| ||||||||||||||||||||  |||||||||||||||||| || |   |||||||    
T  13800901 tttctaggcaagtttcggagcaatccgatcaagtagttcaaaaatccgatttttgactaagaacaactaacaatgacccaaaacataatgatgagagtta 13801000  T
Q  181 ggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttag 232  Q
    |||||||||||||||||| ||||||||  ||  |||||||||| ||||||||    
T  13801001 ggaagattaatattgttcataaaatgataatctatgttacaaacatgtttag 13801052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 229
Target Start/End: Complemental strand, 34528718 - 34528577
Alignment:
Q  88 ggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagat 187  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||| |||    |||||||| |||||    
T  34528718 ggaagttttggagcaatccgatcaagtagaccgaaaaccagatttttgactaagaacagctaataatgacccaaaacagaagaatgagagttagaaagat 34528619  T
Q  188 taatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||| | | | |||||| ||| ||||||||||| |||||    
T  34528618 taatattatccttgaaatgaatatccatgttacaaacatgtt 34528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 7734221 - 7734351
Alignment:
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||| |||||||||| ||||||||| |||||||||  |||||||| ||||||||| |||||||||||||   | ||||||||||||||||||||| | ||    
T  7734221 aatctgatcaagtagcccgaaaacctgatttttgatcaagaacagataacaatgatccaaaacaaaaggatgatagttaggaagattaatattgtccata 7734320  T
Q  202 aaatgactatacatgttacaaatatgtttag 232  Q
    ||||||| || | ||||||||| ||||||||    
T  7734321 aaatgacaattcgtgttacaaacatgtttag 7734351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 7413071 - 7412967
Alignment:
Q  46 ttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaac 144  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||| ||||||||  ||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  7413071 ttcttagggagttatggtccttgagttttttctgattttctgtggaagtttcggagcaatccgatcaactagtccgaaaacctgatttttggctaagaac 7412972  T
Q  145 aggta 149  Q
    |||||    
T  7412971 aggta 7412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 29289497 - 29289647
Alignment:
Q  79 gatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagt 178  Q
    |||||||||||||||||  |||||||  ||||||||||  |||||||| ||||||||||||||||||  ||||||||||| |||||| ||||    ||||    
T  29289497 gatttctggggaagtttcggagcaatttgatcaagtagcacgaaaacctgatttttgactaagaacatctaacaatgacctaaaacagaaggatgcgagt 29289596  T
Q  179 taggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    |||||| ||||||||||| | |||||| | |||  |||||||||| |||||    
T  29289597 taggaaaattaatattgtccataaaattaatatctatgttacaaagatgtt 29289647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 237163 - 237090
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttt 75  Q
    ||||||||||||||||||||||||||| |||||||||||   |||||||||||| || |||||||||| |||||    
T  237163 atggaattttggattttgaggggcggagtcccgtaagaagacccttctaagggattcttggtccttgatttttt 237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 16450583 - 16450355
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttc----tgattt-ctggggaagtttt 96  Q
    ||||||||||||||||||| ||||||| || | |||| | | |||| ||||  |||| || ||||| | |||||||    |||||| || || ||||||     
T  16450583 atggaattttggattttgatgggcggagtctcataagtagtcccttttaagaaagtcttgatccttaatttttttccttctgattttctaggtaagtttc 16450484  T
Q  97 agagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgt 196  Q
      ||||||| |||||||||| || ||||||  |||||||||||||||||| ||||||||||| |||||| || |   ||| ||||||||||||||| |||    
T  16450483 gaagcaatctgatcaagtagcccaaaaaccaaatttttgactaagaacagctaacaatgacctaaaacataatgatgagatttaggaagattaata-tgt 16450385  T
Q  197 tcc-taaaatgactatacatgttacaaata 225  Q
    ||| |||| ||  ||| |||||||||||||    
T  16450384 tccttaaactggttatccatgttacaaata 16450355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 225
Target Start/End: Original strand, 6703994 - 6704144
Alignment:
Q  74 tttctgatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaa 173  Q
    |||||||||||  | ||||||| ||||||||| |||||| ||||||||||||| |||||||||| |  ||||| ||||||||||| ||||   || |       
T  6703994 tttctgatttcctgagaagtttcagagcaatctgatcaaatagtccgaaaaccggatttttgac-attaacagctaacaatgacctaaaatcgaatgatg 6704092  T
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaata 225  Q
    ||||||||||||||||||||||| | |||| |   ||| |||||||||||||    
T  6704093 agagttaggaagattaatattgtccttaaactagttatccatgttacaaata 6704144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 14037759 - 14037928
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaag-ggagtcatggtccttgaattttttctgatttc-tggggaagttttaga 99  Q
    ||||||| ||||||||||||| || || ||||||||||| | |||| |  | |||||| || |||||||  ||||||| ||||  | |||| ||||| ||    
T  14037759 atggaatgttggattttgaggagcagagtcccgtaagaagt-ccttttccgtggagtcttgatccttgatatttttctaattttattgggatgttttgga 14037857  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaagg 170  Q
    |||||| ||||||||||  |||||||  ||||||||||||||||||  ||||||||||| |||||| ||||    
T  14037858 gcaatctgatcaagtagcacgaaaactagatttttgactaagaacaactaacaatgacctaaaacagaagg 14037928  T

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Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 5699963 - 5699897
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaa-----tttccttctaagggagtcatggt 63  Q
    ||||||||||||||||||||||||||| |||||||||||     |||||||||| ||||||||||||    
T  5699963 atggaattttggattttgaggggcggagtcccgtaagaagttcctttccttctacgggagtcatggt 5699897  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 9905428 - 9905390
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaa 40  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  9905428 atggaattttggattttgaggggcggagtcccgtaagaa 9905390  T

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Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 1945377 - 1945414
Alignment:
Q  3 tggaattttggattttgaggggcggaatcccgtaagaa 40  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1945377 tggaattttggattttgaggggcggagtcccgtaagaa 1945414  T

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Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 32035268 - 32035231
Alignment:
Q  206 gactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    |||||||||||||||||||||||||||||| |||||||    
T  32035268 gactatacatgttacaaatatgtttaggatttgtgctg 32035231  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 33413364 - 33413408
Alignment:
Q  85 tggggaagttttagagcaatccgatcaagtagtccgaaaacccga 129  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  33413364 tggggaagtttcagagcaatccgatcaagtagcccgaaaatccga 33413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 17501054 - 17501003
Alignment:
Q  178 ttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||||||| ||| | |||||||||||| ||||||||||| |||||    
T  17501054 ttaggaagattaataatgtccttaaaatgactattcatgttacaaacatgtt 17501003  T

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Target: scaffold0508 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 3187 - 3420
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaatttttt-ctgattt-ctggggaagttttaga 99  Q
    ||||||||||||||||||||||| ||  |||| |||||| | ||||||||||| |||||||||||| |||||||| ||||||| |||||||||||| |||    
T  3187 atggaattttggattttgaggggtggggtcccataagaagtcccttctaagggggtcatggtccttaaatttttttctgattttctggggaagtttcaga 3286  T
Q  100 gcaatccgatcaagtagtccgaaaacccgatttttg-actaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttc 198  Q
    |||||| |||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||| ||||   ||||||| ||||||||||||||| |    
T  3287 gcaatctgatcaagtagcccgaaaacctgatttttttactaagaacaagtaacaatgacccaaaacagaaggatgagagttacgaagattaatattgtcc 3386  T
Q  199 ctaaaatgactatacatgttacaaatatgtttag 232  Q
    ||||||||| |||  |||||||||| ||||||||    
T  3387 ctaaaatgattatcgatgttacaaacatgtttag 3420  T

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Target: scaffold0137 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 9292 - 9518
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctgattt-ctggggaagttttagag 100  Q
    |||| |||||| ||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||| |||||||| || || |||||| ||||    
T  9292 atggtattttgaattttgaggggcggagtcccgtaagaagt-ccttctaagggagtcaaggtccttgaattttctctgattttctaggcaagtttcagag 9390  T
Q  101 caatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttcct 200  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| || |   | |||||  || ||||||||||| | |    
T  9391 caatccgatcaagtaatccgaaaatccgatttttaactaagaacatgtaacaatgacccaaaacagaatgatgaaagttataaatattaatattgtccat 9490  T
Q  201 aaaatgactatacatgttacaaatatgt 228  Q
    ||||||||||| ||||||||||| ||||    
T  9491 aaaatgactatccatgttacaaacatgt 9518  T

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Target: scaffold0027 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 68 - 243
Target Start/End: Original strand, 141824 - 141999
Alignment:
Q  68 gaattttttctgattt-ctggggaagttttagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaa 166  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||     
T  141824 gaattttttctgattttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgcaacaatgacccaaa-cag 141922  T
Q  167 aaggtaaagagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgtttaggatctgtgctg 243  Q
    ||||    |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || |||||||    
T  141923 aaggatgggagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 141999  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 141788 - 141829
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaattt 43  Q
    |||||||||||||||||||||||| || |||| |||||||||    
T  141788 atggaattttggattttgaggggcagagtcccataagaattt 141829  T

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Target: scaffold0018 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 174155 - 174283
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagag 100  Q
    ||||||||||| ||||||||||||||| || |||||||| | |||||||  |||||||||||||||||||||||||||| ||||| |||||||||  |||    
T  174155 atggaattttgaattttgaggggcggagtctcgtaagaagtcccttctacaggagtcatggtccttgaattttttctgattttctagggaagtttcggag 174254  T
Q  101 caatccgatcaagtagtccgaaaacccgatt 131  Q
    |||||||||   ||||||| |||||||||||    
T  174255 caatccgat--tgtagtccaaaaacccgatt 174283  T

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Target: scaffold0182 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 23294 - 23238
Alignment:
Q  174 agagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttt 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  23294 agagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgttt 23238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 23338 - 23300
Alignment:
Q  2 atggaattttggattttgaggggcggaatcccgtaagaa 40  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  23338 atggaattttggattttgaggggcggagtcccgtaagaa 23300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 4732 - 4579
Alignment:
Q  6 aattttggattttgaggggcggaatcccgtaagaatttccttctaagggagtcatggtccttgaattttttctga-tttctggggaagttttagagcaat 104  Q
    ||||||||||||||||||| ||| ||||||||||| | |||| | ||| ||||  | ||||| | |||||| ||| |||||||  ||||||  |||||||    
T  4732 aattttggattttgaggggtggagtcccgtaagaagtcccttttgaggaagtctcgttcctttatttttttatgattttctggccaagtttcggagcaat 4633  T
Q  105 ccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc 158  Q
    |||||||| |||  | ||||||  ||||| ||||| |||||  |||||||||||    
T  4632 ccgatcaaatagctcaaaaaccgtattttggactaggaacaactaacaatgacc 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 9459 - 9395
Alignment:
Q  70 attttttctgatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgattttt 134  Q
    ||||||| ||||||   ||||||||||||||||||| ||||||||||| || ||||| |||||||    
T  9459 attttttatgattttctgggaagttttagagcaatctgatcaagtagtacggaaaccagattttt 9395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 10102 - 10038
Alignment:
Q  70 attttttctgatttctggggaagttttagagcaatccgatcaagtagtccgaaaacccgattttt 134  Q
    ||||||| ||||||   ||||||||||||||||||| ||||||||||| || ||||| |||||||    
T  10102 attttttatgattttctgggaagttttagagcaatctgatcaagtagtacggaaaccagattttt 10038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 59551 - 59495
Alignment:
Q  175 gagttaggaagattaatattgttcctaaaatgactatacatgttacaaatatgttta 231  Q
    ||||||| |||||||||||||| | |||||||||||| ||||| ||||| |||||||    
T  59551 gagttagaaagattaatattgtccttaaaatgactatccatgtcacaaacatgttta 59495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 59865 - 59992
Alignment:
Q  102 aatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggtaaagagttaggaagattaatattgttccta 201  Q
    |||| |||||||||  ||||||| |  |||||||||||||||| | ||||||||||| ||||  |      | ||||||||||||||||||||||   ||    
T  59865 aatctgatcaagtaacccgaaaatcaaatttttgactaagaacggctaacaatgacctaaaatgactatccatgagttaggaagattaatattgtcttta 59964  T
Q  202 aaatgactatacatgttacaaatatgtt 229  Q
    ||||||||||  |||||||||| |||||    
T  59965 aaatgactatctatgttacaaacatgtt 59992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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