View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_high_66 (Length: 365)
Name: NF3772_high_66
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 7 - 349
Target Start/End: Complemental strand, 33893042 - 33892700
Alignment:
| Q |
7 |
acagacccagaattctaaatccccagaaaatgaaaagtcaataagcccttatgaaaaattgaaagcagaagcaagaaatctgaagtgggtcaaagatgaa |
106 |
Q |
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| T |
33893042 |
acagacccagaattctaaatccccggaaaatgaaaagtcaataagcccttatgaaaaattgaaagcagaagcaagaaatctgaagtgggtcaaagatgaa |
33892943 |
T |
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| Q |
107 |
acctttggacttcttagaagaaaggagatagatagcaccaacaccaatggctacaacagcaacggcgacaccaacaagaatttgattttctggtgtttgt |
206 |
Q |
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| T |
33892942 |
acctttggacttcttagaagaaaggagatagatagcaccaacaccaatggctacaacagcaacggcgacaccaacaagaatttgattttctggtgtttgt |
33892843 |
T |
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| Q |
207 |
agaaaatccatgatgatttgaaaaatgggtttggaatgaaagagaataaaagggaatgggtattggggtaggtgaagagagtgagctaatnnnnnnntgt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
33892842 |
agaaaatccatgatgatttgaaaaatgggtttggaatgaaagagaataaaagggaatgggtattggggtaggtgaagagagtgagctaatgggggggtgt |
33892743 |
T |
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| Q |
307 |
ttagaagaagagtggtcacagacacagtgaaagggatctggtg |
349 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33892742 |
ttagaagaagagtggtcacagacacagtgaaagggatctggtg |
33892700 |
T |
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