View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_high_67 (Length: 363)

Name: NF3772_high_67
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_high_67
NF3772_high_67
[»] chr1 (9 HSPs)
chr1 (136-358)||(44236905-44237127)
chr1 (32-138)||(44236627-44236733)
chr1 (27-109)||(23895233-23895315)
chr1 (27-122)||(43029492-43029586)
chr1 (80-122)||(28075670-28075712)
chr1 (32-122)||(29794018-29794108)
chr1 (32-97)||(46504313-46504378)
chr1 (29-89)||(33339513-33339573)
chr1 (32-64)||(37841940-37841972)
[»] chr3 (10 HSPs)
chr3 (34-109)||(2070952-2071027)
chr3 (29-89)||(20349569-20349629)
chr3 (69-122)||(20874433-20874486)
chr3 (32-116)||(38462171-38462255)
chr3 (52-107)||(28842973-28843028)
chr3 (80-122)||(4534485-4534527)
chr3 (32-98)||(36445640-36445706)
chr3 (32-122)||(43116524-43116614)
chr3 (1-33)||(3900454-3900486)
chr3 (32-116)||(21862272-21862356)
[»] chr5 (10 HSPs)
chr5 (32-122)||(20982231-20982321)
chr5 (32-122)||(26516182-26516272)
chr5 (32-116)||(35135758-35135842)
chr5 (35-98)||(4991042-4991105)
chr5 (45-116)||(37611300-37611371)
chr5 (45-116)||(37788030-37788101)
chr5 (32-116)||(35963138-35963222)
chr5 (29-115)||(37618932-37619018)
chr5 (29-122)||(32172537-32172630)
chr5 (70-122)||(6725121-6725173)
[»] chr8 (14 HSPs)
chr8 (32-109)||(39392757-39392834)
chr8 (32-116)||(14482092-14482176)
chr8 (34-122)||(27320200-27320288)
chr8 (32-103)||(28769435-28769506)
chr8 (27-122)||(10727081-10727176)
chr8 (43-122)||(12972740-12972819)
chr8 (32-122)||(31884478-31884568)
chr8 (32-105)||(6918275-6918348)
chr8 (45-97)||(3645925-3645977)
chr8 (79-122)||(2093169-2093212)
chr8 (51-122)||(29592647-29592718)
chr8 (32-114)||(1117238-1117320)
chr8 (32-122)||(4558682-4558772)
chr8 (32-109)||(8799302-8799379)
[»] scaffold0590 (1 HSPs)
scaffold0590 (32-121)||(1170-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (32-121)||(2716-2805)
[»] chr7 (10 HSPs)
chr7 (33-122)||(27481391-27481480)
chr7 (32-109)||(49060437-49060514)
chr7 (34-122)||(2223033-2223120)
chr7 (32-110)||(26935646-26935724)
chr7 (33-122)||(28702641-28702733)
chr7 (45-94)||(27389295-27389344)
chr7 (44-116)||(37497868-37497940)
chr7 (52-98)||(1431424-1431470)
chr7 (61-122)||(5499288-5499349)
chr7 (72-109)||(39566324-39566361)
[»] chr6 (10 HSPs)
chr6 (32-109)||(8349760-8349837)
chr6 (32-116)||(10452456-10452540)
chr6 (32-104)||(2514604-2514676)
chr6 (32-116)||(32975868-32975952)
chr6 (32-122)||(2023725-2023815)
chr6 (69-122)||(4247217-4247270)
chr6 (41-122)||(28130030-28130111)
chr6 (69-122)||(30865358-30865411)
chr6 (32-97)||(33068657-33068722)
chr6 (69-109)||(21919971-21920011)
[»] chr2 (9 HSPs)
chr2 (32-109)||(38239647-38239724)
chr2 (27-122)||(11393457-11393552)
chr2 (27-122)||(11410118-11410213)
chr2 (32-109)||(35459807-35459884)
chr2 (32-108)||(25609695-25609770)
chr2 (32-116)||(31461328-31461412)
chr2 (79-122)||(14316962-14317005)
chr2 (27-107)||(10190178-10190258)
chr2 (69-109)||(43456818-43456858)
[»] chr4 (6 HSPs)
chr4 (32-122)||(7749178-7749268)
chr4 (32-109)||(485978-486055)
chr4 (27-109)||(46796915-46796997)
chr4 (32-122)||(51555963-51556053)
chr4 (41-122)||(41241649-41241730)
chr4 (70-122)||(24193469-24193521)
[»] scaffold0110 (1 HSPs)
scaffold0110 (47-122)||(34023-34098)
[»] scaffold0455 (1 HSPs)
scaffold0455 (41-122)||(8617-8698)


Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 44236905 - 44237127
Alignment:
Q  136 tagttttgatagtgatggaggaaaatcaagatgattatcaataactgagagtttagctcccttcctccccttaatgacaaaaagtttcgtgtagagttgt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44236905 tagttttgatagtgatggaggaaaatcaagatgattatcaataactgagagtttagctcccttcctccccttaacgacaaaaagtttcgtgtagagttgt 44237004  T
Q  236 agaagtagaattaaaacattgcaaccaatgtaggactggactgtgctggaattcaagtgtgattagttagttctacgttgattagagatgagctaaatgt 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44237005 agaagtagaattaaaacattgcaaccaatgtaggactggactgtgttggaattcaagtgtgattagttagttctacgttgattagagatgagctaaatgt 44237104  T
Q  336 tggagtaccggccctttgctact 358  Q
    |||||||||||||||||| ||||    
T  44237105 tggagtaccggccctttgttact 44237127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 44236627 - 44236733
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaattggagaac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44236627 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaattggagaac 44236726  T
Q  132 cagttag 138  Q
    |||||||    
T  44236727 cagttag 44236733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 23895315 - 23895233
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||| |||||||| |||||||||| |||||||| |||| ||  |||||| |||||||  |||||||| |||||||||||||||    
T  23895315 aatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaattaa 23895233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 43029492 - 43029586
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| |||||||| |||||| ||| ||||| || |||| || |||| || | |||| ||||||||||| |||||||||||||| |||||| |||||    
T  43029492 aatttattttatcttttgttgtagaaataggttatacataagcactcatat-ataatcacttatgctaaaagtgcttaattaaattgtttatccaa 43029586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 28075712 - 28075670
Alignment:
Q  80 taagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||||| |||||||||||||||||||| |||||| |||||    
T  28075712 taagcacttgtgctataagtgcttaattaaattgtttatccaa 28075670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 29794018 - 29794108
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| ||||||| |  |||||| | |||| |||||| ||| ||| || ||||||||||||||| ||||||||||  ||||| |||||    
T  29794018 attttatcttttgttacaaaaatagcctatacataaacacatatatgaaaaacacttatgctataagcgcttaattaagctgtttatccaa 29794108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 46504313 - 46504378
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataa 97  Q
    |||||||| |||||||||  ||||| || || |||||||||||| |||||||  ||||||||||||    
T  46504313 attttatcttttgttataaaaatagtttatagacaaacacttatatgataagagcttatgctataa 46504378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 33339513 - 33339573
Alignment:
Q  29 ttcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcactta 89  Q
    ||||||||||| |||| ||||| |||||||| |||| |||||| ||| |||||| ||||||    
T  33339513 ttcattttatcttttggtatagaaatagcttatacataaacacctatatgataaccactta 33339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 37841972 - 37841940
Alignment:
Q  32 attttatcatttgttataggaatagcttctaca 64  Q
    |||||||||||||||||||||||||||| ||||    
T  37841972 attttatcatttgttataggaatagcttataca 37841940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 2071027 - 2070952
Alignment:
Q  34 tttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||| ||||||| || |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  2071027 tttatcttttgttaaagaaatagcttatacattaacacttatgtgataagtacttatgctataagtgcttaattaa 2070952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 20349569 - 20349629
Alignment:
Q  29 ttcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcactta 89  Q
    ||||||||||| |||||||  | |||||||| ||||||||||||||| |||||||||||||    
T  20349569 ttcattttatcctttgttactgaaatagcttatacacaaacacttatatgataagcactta 20349629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 20874433 - 20874486
Alignment:
Q  69 cacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||| ||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  20874433 cacttatatgatatgcatttatgctataagtgcttaattaagttgtttatccaa 20874486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 38462255 - 38462171
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||| |||| ||||| |||||||| || | |||||||||| |||||||   ||||||| || | |||||||||||||||||    
T  38462255 attttatcttttggtatagaaatagcttataaataaacacttatatgataagtgtttatgctttaggcgcttaattaacttgttt 38462171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 28842973 - 28843028
Alignment:
Q  52 aatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaatt 107  Q
    |||||||| |||| || ||||||| |||||||| |||||| |||||||||||||||    
T  28842973 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 28843028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 4534485 - 4534527
Alignment:
Q  80 taagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||||||| |||||||||||||||||| |||||| |||||    
T  4534485 taagcacttatactataagtgcttaattaagttgtttatccaa 4534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 36445706 - 36445640
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataag 98  Q
    ||||| || |||||||||| |||||||| |||| ||| ||| || |||||||||||||||| |||||    
T  36445706 attttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 36445640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 43116524 - 43116614
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| |||||||||| ||||||||  ||| |||||||| | |||||| || |||||||||||   || |||||| |||||| |||||    
T  43116524 attttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataaacactaaattaagttgtttatccaa 43116614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3900486 - 3900454
Alignment:
Q  1 cactatcaaccagctcatgaaactcaaattcat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  3900486 cactatcaaccagctcatgaaacccaaattcat 3900454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 21862272 - 21862356
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||| ||||| |||| || ||||| ||| ||| |||||||  ||||| |  ||||||||||||||||||||| | ||||||    
T  21862272 attttatcttttgtaatagaaacagcttatacgcaagcacttataagataaacgtttatgctataagtgcttaattgagttgttt 21862356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 20982231 - 20982321
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| |||||||||| |||||||| |||| || ||||||| ||||||||||||||||||||||  |||||| || |||||| |||||    
T  20982231 attttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatccaa 20982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 26516272 - 26516182
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| |||||| ||| |||||||| |||| || ||||||| |||||||| ||||||||||||| |||||||||| |||||| |||||    
T  26516272 attttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaa 26516182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 35135758 - 35135842
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||| |||||||||| |||| ||| |||| |||||||||| || |||||||||||||||| |||| | |||||| ||||||    
T  35135758 attttatcttttgttatagaaatatcttatacataaacacttatatgttaagcacttatgctatgagtgttgaattaagttgttt 35135842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 4991042 - 4991105
Alignment:
Q  35 ttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataag 98  Q
    ||||| |||||||||  |||||||| ||||||||||||||| |||||| | |||||||||||||    
T  4991042 ttatcttttgttataaaaatagcttatacacaaacacttatatgataatcgcttatgctataag 4991105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 37611300 - 37611371
Alignment:
Q  45 ttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||| |||||||| |||| || ||||||| ||| || || ||||||||||||||||||||||| ||||||    
T  37611300 ttatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaaattgttt 37611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 37788030 - 37788101
Alignment:
Q  45 ttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||| |||||||| |||| || ||||||| ||| || || ||||||||||||||||||||||| ||||||    
T  37788030 ttatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaaattgttt 37788101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 35963222 - 35963138
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||| ||| ||| |||||| ||||  || ||||||| ||||||| |||||| | ||||||||||||||||||| |||| ||||||    
T  35963222 atttgatcttttcttatagaaataatttatacacaagcacttatttgataatcgcttatgctataagtgcttagttaagttgttt 35963138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 37618932 - 37619018
Alignment:
Q  29 ttcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtt 115  Q
    ||||||||||| ||| | |||| |||||||| | || || |||||||  ||||| |||||||||| || |||||||||||| |||||    
T  37618932 ttcattttatcttttataatagaaatagcttttgcataagcacttatacgataaacacttatgctgtatgtgcttaattaagttgtt 37619018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 32172630 - 32172537
Alignment:
Q  29 ttcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||||||| |||||| ||| ||||| || |||| || | ||| | |||||||| |||||||| |||| |||||||||  |||||| |||||    
T  32172630 ttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttatgctgtaagcgcttaattatgttgtttatccaa 32172537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 6725173 - 6725121
Alignment:
Q  70 acttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||| ||||||||||||||||||||||  ||||||||| || ||| |||||    
T  6725173 acttatatgataagcacttatgctataagcacttaattaaattatttatccaa 6725121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 39392757 - 39392834
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| |||||||||| ||||| || |||| |  ||||||| ||||||||||||||||||||| |||||||||||    
T  39392757 attttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataaatgcttaattaa 39392834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 14482176 - 14482092
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||| |||||||||| ||||| || |||| || ||||||| ||||||||||| ||||||||||  ||||||||| ||||||    
T  14482176 attttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaaattgttt 14482092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 27320288 - 27320200
Alignment:
Q  34 tttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||| |||| |||||||||||||| |||  || |||||||||||||||   |||||||||||| |||||||||| |||||| |||||    
T  27320288 tttatcttttgctataggaatagcttatacgtaagcacttatgtgataagtgtttatgctataagcgcttaattaaattgtttttccaa 27320200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 28769435 - 28769506
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgctt 103  Q
    |||||||  ||||||||||||||||||| |||| || || |||| ||||||||||||||||||||| |||||    
T  28769435 attttatagtttgttataggaatagcttatacataagcatttatatgataagcacttatgctataaatgctt 28769506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 10727176 - 10727081
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| |||| ||| |||| ||||| |||||||| | || || ||||||| |||| | |||||||||||||| ||||||||||| ||| ||||||||    
T  10727176 aatttatttcatcttttgctatagaaatagcttatgcataagcacttatatgatgaacacttatgctataaatgcttaattaagttggttgtccaa 10727081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 12972819 - 12972740
Alignment:
Q  43 tgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||| | |||||||| |||| || ||||||| ||||||   ||||||||||||| |||||||||| ||||||||||||    
T  12972819 tgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgcttaattaagttgtttgtccaa 12972740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 31884568 - 31884478
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||  |||||||||| |||| ||| |||| |  ||||| | |||||||| |||||||||||||||||||||| | |||||| |||||    
T  31884568 attttatattttgttatagaaataacttatacatatgcacttgtatgataagcgcttatgctataagtgcttaattgagttgtttatccaa 31884478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 6918275 - 6918348
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaa 105  Q
    |||||||| ||| |||||  |||||||| || |||||||||||| | ||||||||||| | |||||||||||||    
T  6918275 attttatcttttattatataaatagcttatatacaaacacttatattataagcacttaagttataagtgcttaa 6918348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 3645925 - 3645977
Alignment:
Q  45 ttataggaatagcttctacacaaacacttatgtgataagcacttatgctataa 97  Q
    |||||| |||||||| ||||||| ||||||| |||||| ||||||||||||||    
T  3645925 ttatagaaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 2093212 - 2093169
Alignment:
Q  79 ataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||    
T  2093212 ataagcacttatgcgataagcgcttaattaagttgtttgtccaa 2093169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 29592647 - 29592718
Alignment:
Q  51 gaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||||| |||| || ||||||| ||||||| ||||||||||||| ||| ||| ||| |||||| |||||    
T  29592647 gaatagcttatacaaaagcacttatatgataagaacttatgctataaatgcataactaagttgtttatccaa 29592718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 1117320 - 1117238
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgt 114  Q
    ||||||||||| ||||||| || | |||  ||| || ||||||| ||||||||||| ||| ||||||| ||||||||| ||||    
T  1117320 attttatcattcgttatagaaacaacttacacataatcacttatatgataagcactaatgatataagtacttaattaagttgt 1117238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 4558772 - 4558682
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| ||| |||||| |||||||| |||| |||||||||  | |||| |  |||||||||||| || ||||||| |||||| |||||    
T  4558772 attttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagttgtttatccaa 4558682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 8799379 - 8799302
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| |||||||||| |||| | |  | |||| ||| ||| ||||||||| || ||||||||||||||||||||    
T  8799379 attttatcttttgttatagaaataacatacatacaagcacatatatgataagcatttgtgctataagtgcttaattaa 8799302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 1170 - 1259
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtcca 121  Q
    |||||||| |||||||||| |||||||| |||| || ||||||| |||||  |  ||||||||||||| ||||||||| |||||| ||||    
T  1170 attttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 2805 - 2716
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtcca 121  Q
    |||||||| |||||||||| |||||||| |||| || ||||||| |||||  |  ||||||||||||| ||||||||| |||||| ||||    
T  2805 attttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 2716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 27481391 - 27481480
Alignment:
Q  33 ttttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||| |||||||||| |||||||| |||| |||||||||| | |||| || ||||||||||||  | ||||||| |||||| |||||    
T  27481391 ttttatcctttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagcacctaattaagttgtttatccaa 27481480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 49060514 - 49060437
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||  |||||||||| |||||||| |||| ||| |||||| ||||||||  |||| ||||||||||||||||||    
T  49060514 attttattttttgttatagaaatagcttatacataaatacttatatgataagccattatactataagtgcttaattaa 49060437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 2223120 - 2223033
Alignment:
Q  34 tttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||| |||||||||| |||||||| |||| ||||||||||  |||||| | ||||||||||| ||| ||||||| |||||| |||||    
T  2223120 tttatcttttgttatagaaatagcttatacataaacacttatacgataag-atttatgctataaatgcctaattaaattgtttatccaa 2223033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 26935646 - 26935724
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaac 110  Q
    ||||||||||||||||||  ||||||||  ||| || ||||||| |||||| | |||||| |||||| |||||||||||    
T  26935646 attttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaac 26935724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 28702733 - 28702641
Alignment:
Q  33 ttttatcatttgttataggaatagcttctacacaaaca---cttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||| |||||||||| |||||||| |||| ||| |   ||| | || || ||||||||||||||||||||||||||| |||||| |||||    
T  28702733 ttttatcttttgttatagaaatagcttatacataaaaaatacttgtatggtacgcacttatgctataagtgcttaattaagttgtttatccaa 28702641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 27389344 - 27389295
Alignment:
Q  45 ttataggaatagcttctacacaaacacttatgtgataagcacttatgcta 94  Q
    |||||| |||||||| |||| |||||||||| ||||||||||||||||||    
T  27389344 ttatagaaatagcttatacataaacacttatatgataagcacttatgcta 27389295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 37497868 - 37497940
Alignment:
Q  44 gttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    ||||||| |||| ||| ||||||| ||  ||| |||||||| ||||| |||||||||||||||||| ||||||    
T  37497868 gttatagaaataacttgtacacaatcatatatatgataagcgcttatactataagtgcttaattaagttgttt 37497940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 1431424 - 1431470
Alignment:
Q  52 aatagcttctacacaaacacttatgtgataagcacttatgctataag 98  Q
    |||| ||| |||| |||||||||| ||||||||||||||||||||||    
T  1431424 aataacttatacataaacacttatatgataagcacttatgctataag 1431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 5499288 - 5499349
Alignment:
Q  61 tacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| ||||||| || |||||||||||| ||| ||||||| |||||||| |||||| |||||    
T  5499288 tacataaacactcatatgataagcacttttgccataagtggttaattaaattgtttatccaa 5499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 39566324 - 39566361
Alignment:
Q  72 ttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  39566324 ttatttgataagcacttatgttataagtgcttaattaa 39566361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 8349760 - 8349837
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| ||||||| || ||||| || ||||||||||||||| |||||||   |||||||||||| ||||||||||    
T  8349760 attttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaattaa 8349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 10452456 - 10452540
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||  |||||||||| |||||||| |||| || |||| || |||||  ||||||||||||||| |||||||||| ||||||    
T  10452456 attttatattttgttatagaaatagcttatacataagcactgatatgatagccacttatgctataagagcttaattaagttgttt 10452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 2514676 - 2514604
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgctta 104  Q
    |||||||| ||| |||||| |||||||| |||| || ||||||  ||||||||| |||||||||||| |||||    
T  2514676 attttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataagagctta 2514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 32975952 - 32975868
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||  ||||||| || |||| ||| |||| |||||||||| ||| |||| ||||||||||||  |||||||||| ||||||    
T  32975952 attttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgttt 32975868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 2023725 - 2023815
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| |||| ||||| |||| ||| || |  ||||||||| |||||||  | ||| |||||||||||||||||| |||||| |||||    
T  2023725 attttatcttttgctatagaaataacttatatatgaacacttatatgataagtgcctatactataagtgcttaattaagttgtttatccaa 2023815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 4247217 - 4247270
Alignment:
Q  69 cacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||| ||||||| ||||||||||||||  ||||||||| |||||| |||||    
T  4247217 cacttatatgataagtacttatgctataagcacttaattaagttgtttatccaa 4247270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 28130030 - 28130111
Alignment:
Q  41 tttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||||| ||||||||  ||||||  |||||| |||||  | |||||||||||||  ||||||||  ||||||||||||    
T  28130030 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaa 28130111  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 30865411 - 30865358
Alignment:
Q  69 cacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||||||||||| | ||||||| ||||| ||||||||||| |||||| |||||    
T  30865411 cacttatgtgataggaacttatgttataaatgcttaattaagttgtttatccaa 30865358  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 33068657 - 33068722
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataa 97  Q
    |||||||| |||||||||| |||| ||| |||| || || |||| |||||||| ||||||||||||    
T  33068657 attttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataa 33068722  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 21920011 - 21919971
Alignment:
Q  69 cacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    ||||||| ||||||| |||||||||||||| ||||||||||    
T  21920011 cacttatatgataagtacttatgctataagcgcttaattaa 21919971  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 38239647 - 38239724
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| |||||||||| |||||||| |||| |||||||||  |||| ||  ||||||||| ||||||||||||||    
T  38239647 attttatcttttgttatagaaatagcttatacataaacacttacatgatgagtgcttatgctacaagtgcttaattaa 38239724  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 11393457 - 11393552
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| ||| |||| |||| ||||| |||||||| || | || ||||||| |||||| ||||| ||||||||||||||||||||  ||||| |||||    
T  11393457 aatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaa 11393552  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 11410118 - 11410213
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| ||| |||| |||| ||||| |||||||| || | || ||||||| |||||| ||||| ||||||||||||||||||||  ||||| |||||    
T  11410118 aatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaa 11410213  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 35459884 - 35459807
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| |||| ||||  |||||||| |||| || ||||||| |||||| ||||||||||||||| ||| ||||||    
T  35459884 attttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataagagctgaattaa 35459807  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 25609770 - 25609695
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaatta 108  Q
    |||||||| ||| |||||| |||||||| |||| || |||||||||| ||||  ||||||||| |||||||||||||    
T  25609770 attttatcttttcttatagaaatagcttatacataagcacttatgtg-taagagcttatgctagaagtgcttaatta 25609695  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 31461412 - 31461328
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgttt 116  Q
    |||||||| |||||||||| |||||||| || | || ||||||| |||||  |  |||||||| |||||||||||||| ||||||    
T  31461412 attttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgttt 31461328  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 14316962 - 14317005
Alignment:
Q  79 ataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||||||||||||||| |||||||||| |||||| |||||    
T  14316962 ataagcacttatgctataagcgcttaattaatttgtttatccaa 14317005  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 10190258 - 10190178
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaatt 107  Q
    |||| |||||||| |||||||||  ||||| || |||| || ||||||| |||||| ||||  | ||||||||||||||||    
T  10190258 aatttattttatcctttgttataaaaatagtttatacataagcacttatatgataaccactcctactataagtgcttaatt 10190178  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 43456818 - 43456858
Alignment:
Q  69 cacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    ||||||||||||||   ||||||||||||||||||||||||    
T  43456818 cacttatgtgataaatgcttatgctataagtgcttaattaa 43456858  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 7749178 - 7749268
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    ||||| || ||| |||||| |||||| | |||| |||||||||| || ||| ||||||||||||||| ||||| |||| |||||| |||||    
T  7749178 attttctcttttattatagaaatagcgtatacataaacacttatatggtaaacacttatgctataagagcttagttaagttgtttatccaa 7749268  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 486055 - 485978
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||||||| |||||| ||| |||||| | |||| || ||||| | |||||||| ||||||||||||| ||||||||||    
T  486055 attttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataagcgcttaattaa 485978  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 46796997 - 46796915
Alignment:
Q  27 aattcattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaa 109  Q
    |||| |||||||| ||||||||   |||||||| | || ||  |||||| ||||||||||||||| |||||||| ||||||||    
T  46796997 aatttattttatcgtttgttatgaaaatagcttatgcataagaacttatatgataagcacttatgttataagtgattaattaa 46796915  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 51555963 - 51556053
Alignment:
Q  32 attttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||| |||||||||  |||||||| |||| || ||||||| ||||||    ||||| ||||||||||| ||||| ||||||| ||||    
T  51555963 attttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagtgctttattaagttgtttggccaa 51556053  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 41241649 - 41241730
Alignment:
Q  41 tttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||||| ||||||||  ||||||  |||||| |||||  | |||||||||||||  ||||||||  ||||||||||||    
T  41241649 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaa 41241730  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 24193521 - 24193469
Alignment:
Q  70 acttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||| ||||||||  |||||||||||||||| |||||| |||||| |||||    
T  24193521 acttatatgataagcgtttatgctataagtgctcaattaagttgtttatccaa 24193469  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 34023 - 34098
Alignment:
Q  47 ataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||| ||||||||||||| || ||||||| |||| ||  |||||||||||||  ||||||||| |||||| |||||    
T  34023 atagaaatagcttctacataatcacttatatgatcagatcttatgctataagctcttaattaagttgtttatccaa 34098  T

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Target: scaffold0455 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 8617 - 8698
Alignment:
Q  41 tttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaacttgtttgtccaa 122  Q
    |||||||||| ||||||||  ||||||  |||||| |||||  | |||||||||||||  ||||||||  ||||||||||||    
T  8617 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaa 8698  T

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