View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_high_7 (Length: 642)
Name: NF3772_high_7
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 557; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 29 - 625
Target Start/End: Original strand, 30015854 - 30016449
Alignment:
| Q |
29 |
atagtcttttcaagttgcctggttatctatcatcccaatgattcatgttattttcacacacattatccactatagccaattttatcttgatggcagaatt |
128 |
Q |
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| T |
30015854 |
atagtcttttgaagttgcctggttatct-tcatcccaatgattcatgctattttcacacacattatccactatagccaattttatcttgatggcagaatt |
30015952 |
T |
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| Q |
129 |
tggacaaagtatacattgctgtatatattggtttagactttagtttacataacattttctttgcattgaatgcgctgaactccaattaataagaaattta |
228 |
Q |
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| T |
30015953 |
tggacaaagtatacattgctgtatatattggtttagactttagtttacataacattttctttgcattgaatgcgctgaactccaattaacaagaaattta |
30016052 |
T |
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| Q |
229 |
tttgcaagaaatgttccgcaacacaattttgcaaatttgttttatttgttttgttgggattggttattaacttgttatgacagtttccgatatgtgctaa |
328 |
Q |
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| T |
30016053 |
tttgcaagaaatgttccgcaacacaattttgcaatttttttttatttgttttgttgggattggttattaacttgttaggacagtttccgatatgtgctaa |
30016152 |
T |
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| Q |
329 |
tgctacattttacagctcaatggaagcttagttagtatttagcttttattattatttccccggccccagcttgtttccttttaggcctgtttaggtttgt |
428 |
Q |
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| T |
30016153 |
tgctacattttacagctcaatggaagcttagttagtatttagcttttattattatttccccggccctagcttgtttccttttaggcctgtttaggtttgt |
30016252 |
T |
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| Q |
429 |
ggttatattcatttggagtgttgtttgtattgtagtgtacattctattgaggtggaggatatctcgggccagggtggcatctatattcaatccgatggag |
528 |
Q |
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| T |
30016253 |
ggttatactcatttggagtgttgtttgtattgtagtgtacattctattgaggtggaggatatctcgggccagggtggcatctatattcaatccgatggag |
30016352 |
T |
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| Q |
529 |
agcatttgggattccttccaaaaaagattagtgttcttcctgctgctgttgagatgatattttgatccttctggagtataacaaatttgacaaaaaa |
625 |
Q |
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| T |
30016353 |
agcatttgggattccttccaaaaaagattagtgttcttcctgctgctgttgagatgatattttgatccttctggagtataacaaatttgacaaaaaa |
30016449 |
T |
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