View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_high_78 (Length: 335)

Name: NF3772_high_78
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_high_78
NF3772_high_78
[»] chr4 (34 HSPs)
chr4 (1-129)||(23457408-23457536)
chr4 (128-184)||(3880501-3880557)
chr4 (125-187)||(16573373-16573435)
chr4 (129-187)||(45618284-45618342)
chr4 (130-187)||(22204055-22204112)
chr4 (130-187)||(42359348-42359405)
chr4 (127-187)||(17281568-17281628)
chr4 (128-184)||(17326739-17326795)
chr4 (127-187)||(17370070-17370130)
chr4 (128-187)||(33137230-33137289)
chr4 (129-187)||(3879085-3879143)
chr4 (133-187)||(17371847-17371901)
chr4 (129-187)||(19674413-19674471)
chr4 (130-184)||(32699319-32699373)
chr4 (129-182)||(41933817-41933870)
chr4 (119-187)||(29059702-29059770)
chr4 (133-181)||(35054665-35054713)
chr4 (125-161)||(42848022-42848058)
chr4 (117-161)||(43231075-43231119)
chr4 (130-185)||(19675624-19675679)
chr4 (132-187)||(47359516-47359571)
chr4 (133-183)||(38167779-38167829)
chr4 (127-187)||(40198574-40198631)
chr4 (130-180)||(44705299-44705349)
chr4 (129-187)||(45619733-45619791)
chr4 (129-187)||(54121702-54121760)
chr4 (128-161)||(31812182-31812215)
chr4 (128-185)||(34659704-34659761)
chr4 (125-161)||(13530682-13530718)
chr4 (125-161)||(29499177-29499213)
chr4 (133-181)||(41935078-41935126)
chr4 (127-187)||(42358029-42358089)
chr4 (129-161)||(51738136-51738168)
chr4 (135-187)||(54120759-54120811)
[»] chr1 (39 HSPs)
chr1 (130-187)||(17976761-17976818)
chr1 (127-187)||(9774890-9774950)
chr1 (123-187)||(35721094-35721158)
chr1 (128-187)||(17977561-17977620)
chr1 (120-187)||(27264218-27264285)
chr1 (128-187)||(37395631-37395690)
chr1 (130-187)||(20722472-20722529)
chr1 (126-187)||(20723690-20723751)
chr1 (135-187)||(27816722-27816774)
chr1 (129-185)||(48334136-48334192)
chr1 (124-187)||(11711256-11711318)
chr1 (128-187)||(26863858-26863917)
chr1 (128-187)||(27262906-27262965)
chr1 (128-187)||(27815439-27815498)
chr1 (128-187)||(35911890-35911949)
chr1 (129-187)||(34934749-34934807)
chr1 (125-187)||(47038861-47038923)
chr1 (130-187)||(24427371-24427428)
chr1 (130-187)||(37396842-37396899)
chr1 (130-187)||(46075052-46075109)
chr1 (130-184)||(24609919-24609973)
chr1 (129-187)||(35722287-35722345)
chr1 (129-187)||(39163026-39163084)
chr1 (129-179)||(45979506-45979556)
chr1 (129-187)||(46073884-46073942)
chr1 (130-187)||(23469971-23470028)
chr1 (128-187)||(13074576-13074635)
chr1 (128-187)||(50164401-50164460)
chr1 (133-187)||(9774040-9774094)
chr1 (121-187)||(26865186-26865252)
chr1 (129-187)||(30724017-30724075)
chr1 (129-187)||(35910652-35910709)
chr1 (126-187)||(11710549-11710610)
chr1 (128-185)||(48588965-48589022)
chr1 (128-185)||(48594052-48594109)
chr1 (128-185)||(48598663-48598720)
chr1 (132-185)||(51240121-51240174)
chr1 (304-332)||(26865020-26865048)
chr1 (125-161)||(47819565-47819601)
[»] chr5 (15 HSPs)
chr5 (124-187)||(3936572-3936635)
chr5 (129-187)||(4565392-4565450)
chr5 (129-183)||(15599764-15599818)
chr5 (127-187)||(27571131-27571191)
chr5 (129-187)||(3954051-3954109)
chr5 (129-187)||(31540495-31540553)
chr5 (132-184)||(14809165-14809217)
chr5 (127-184)||(34911833-34911890)
chr5 (129-187)||(3938062-3938120)
chr5 (119-161)||(5917115-5917157)
chr5 (305-335)||(27570253-27570283)
chr5 (120-161)||(1381237-1381278)
chr5 (124-161)||(5103970-5104007)
chr5 (128-185)||(18258160-18258217)
chr5 (130-187)||(31541624-31541681)
[»] chr2 (21 HSPs)
chr2 (128-187)||(25979253-25979312)
chr2 (126-187)||(1777465-1777526)
chr2 (130-187)||(1778792-1778849)
chr2 (119-187)||(25977859-25977927)
chr2 (129-187)||(20245307-20245366)
chr2 (129-187)||(2412430-2412488)
chr2 (127-187)||(8809593-8809654)
chr2 (133-184)||(12067000-12067051)
chr2 (130-187)||(25283274-25283331)
chr2 (129-185)||(29794321-29794376)
chr2 (129-187)||(23861751-23861809)
chr2 (133-187)||(36837780-36837834)
chr2 (126-184)||(43824159-43824217)
chr2 (130-187)||(11088682-11088739)
chr2 (142-187)||(12067040-12067085)
chr2 (128-161)||(17302112-17302145)
chr2 (130-187)||(19604921-19604978)
chr2 (304-332)||(12067222-12067250)
chr2 (128-176)||(24754171-24754219)
chr2 (129-185)||(30215816-30215872)
chr2 (125-161)||(31644836-31644872)
[»] scaffold0002 (4 HSPs)
scaffold0002 (129-218)||(345868-345957)
scaffold0002 (129-187)||(344936-344994)
scaffold0002 (130-184)||(374335-374389)
scaffold0002 (129-177)||(376381-376429)
[»] chr3 (39 HSPs)
chr3 (129-187)||(39820606-39820664)
chr3 (129-187)||(47433811-47433869)
chr3 (120-187)||(53121292-53121359)
chr3 (125-184)||(40477379-40477438)
chr3 (128-187)||(52401015-52401074)
chr3 (129-184)||(54437472-54437527)
chr3 (129-187)||(52403126-52403184)
chr3 (130-187)||(52708619-52708676)
chr3 (132-187)||(20488368-20488423)
chr3 (129-184)||(46026075-46026130)
chr3 (125-187)||(39819307-39819369)
chr3 (130-187)||(46104343-46104400)
chr3 (133-177)||(15782721-15782765)
chr3 (131-187)||(20489360-20489416)
chr3 (129-185)||(20585648-20585704)
chr3 (129-181)||(42446525-42446577)
chr3 (127-187)||(43734043-43734103)
chr3 (131-187)||(45267306-45267362)
chr3 (254-335)||(46106608-46106699)
chr3 (133-185)||(52707539-52707591)
chr3 (128-187)||(46027419-46027478)
chr3 (129-187)||(976779-976837)
chr3 (121-187)||(3416486-3416552)
chr3 (133-187)||(22508738-22508792)
chr3 (123-161)||(25615968-25616006)
chr3 (128-162)||(35936778-35936812)
chr3 (131-181)||(40476222-40476272)
chr3 (129-187)||(45268572-45268630)
chr3 (127-185)||(55345065-55345123)
chr3 (130-187)||(4705681-4705738)
chr3 (134-187)||(11914835-11914888)
chr3 (129-178)||(20802847-20802896)
chr3 (127-184)||(41780813-41780870)
chr3 (130-187)||(43641143-43641200)
chr3 (129-161)||(15979670-15979702)
chr3 (129-161)||(28452345-28452377)
chr3 (131-187)||(32637190-32637246)
chr3 (128-180)||(44507808-44507860)
chr3 (119-183)||(51004131-51004195)
[»] chr6 (20 HSPs)
chr6 (130-187)||(20897499-20897556)
chr6 (129-187)||(21953205-21953263)
chr6 (127-187)||(16995448-16995508)
chr6 (126-184)||(20391210-20391268)
chr6 (129-187)||(34998143-34998201)
chr6 (130-187)||(18810532-18810589)
chr6 (130-187)||(21165246-21165303)
chr6 (129-184)||(3276366-3276421)
chr6 (129-187)||(17517311-17517369)
chr6 (125-187)||(26421845-26421907)
chr6 (129-187)||(34995113-34995171)
chr6 (130-187)||(1972400-1972457)
chr6 (130-187)||(20393270-20393327)
chr6 (129-185)||(29291358-29291414)
chr6 (130-185)||(1974156-1974211)
chr6 (126-177)||(20895954-20896005)
chr6 (127-185)||(17516159-17516217)
chr6 (131-161)||(23629071-23629101)
chr6 (125-185)||(1171655-1171715)
chr6 (143-187)||(26419526-26419570)
[»] chr7 (29 HSPs)
chr7 (123-187)||(41693638-41693702)
chr7 (125-187)||(24195602-24195664)
chr7 (129-187)||(31848146-31848204)
chr7 (129-187)||(32197911-32197969)
chr7 (128-187)||(13418948-13419007)
chr7 (136-187)||(43869914-43869965)
chr7 (129-187)||(24197105-24197163)
chr7 (133-187)||(32544776-32544830)
chr7 (122-187)||(42254950-42255015)
chr7 (129-184)||(5611512-5611567)
chr7 (128-187)||(12385709-12385768)
chr7 (128-187)||(35212066-35212125)
chr7 (119-161)||(5234173-5234215)
chr7 (129-187)||(17066424-17066482)
chr7 (131-185)||(32196685-32196739)
chr7 (127-183)||(554242-554298)
chr7 (123-187)||(5610149-5610213)
chr7 (127-183)||(38742178-38742234)
chr7 (128-187)||(11217073-11217132)
chr7 (131-182)||(31489942-31489993)
chr7 (123-161)||(3975542-3975580)
chr7 (129-187)||(12933418-12933476)
chr7 (133-187)||(32543483-32543537)
chr7 (129-187)||(40576765-40576823)
chr7 (129-187)||(41694957-41695015)
chr7 (120-161)||(1559674-1559715)
chr7 (130-162)||(6911215-6911247)
chr7 (125-161)||(9659658-9659694)
chr7 (125-161)||(25092155-25092191)
[»] scaffold0517 (2 HSPs)
scaffold0517 (128-187)||(11524-11583)
scaffold0517 (130-187)||(10315-10372)
[»] scaffold0106 (2 HSPs)
scaffold0106 (121-187)||(30909-30976)
scaffold0106 (129-187)||(29728-29786)
[»] chr8 (36 HSPs)
chr8 (128-187)||(22272272-22272331)
chr8 (129-187)||(10717120-10717178)
chr8 (129-187)||(10718450-10718508)
chr8 (131-187)||(4182623-4182679)
chr8 (127-187)||(22534724-22534784)
chr8 (127-187)||(36588219-36588279)
chr8 (129-187)||(1385557-1385615)
chr8 (130-184)||(28997998-28998052)
chr8 (127-177)||(30123149-30123199)
chr8 (129-187)||(38456732-38456790)
chr8 (129-187)||(38658480-38658538)
chr8 (129-187)||(45517962-45518020)
chr8 (127-187)||(22533314-22533374)
chr8 (131-187)||(28996835-28996891)
chr8 (127-187)||(36589389-36589449)
chr8 (129-187)||(1376934-1376992)
chr8 (128-178)||(10292814-10292864)
chr8 (129-187)||(22270942-22271000)
chr8 (132-185)||(3483635-3483688)
chr8 (126-187)||(34904511-34904572)
chr8 (128-184)||(14197823-14197879)
chr8 (129-185)||(41847184-41847240)
chr8 (130-185)||(1420446-1420501)
chr8 (122-161)||(8298944-8298983)
chr8 (126-161)||(20984479-20984514)
chr8 (123-161)||(11976366-11976404)
chr8 (126-184)||(27117922-27117980)
chr8 (129-187)||(30124225-30124283)
chr8 (119-185)||(35115584-35115650)
chr8 (130-187)||(4183981-4184038)
chr8 (128-177)||(9465320-9465369)
chr8 (124-161)||(20984140-20984177)
chr8 (128-161)||(28324150-28324183)
chr8 (128-161)||(42429756-42429789)
chr8 (132-184)||(38455449-38455501)
chr8 (127-187)||(45516394-45516454)
[»] scaffold0001 (2 HSPs)
scaffold0001 (130-187)||(119593-119650)
scaffold0001 (130-187)||(120987-121044)
[»] scaffold0230 (1 HSPs)
scaffold0230 (130-187)||(433-490)
[»] scaffold0562 (1 HSPs)
scaffold0562 (129-187)||(9921-9979)
[»] scaffold0051 (1 HSPs)
scaffold0051 (119-161)||(5388-5430)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-183)||(202578-202632)
[»] scaffold0599 (1 HSPs)
scaffold0599 (134-187)||(6586-6639)


Alignment Details
Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23457536 - 23457408
Alignment:
Q  1 gggtgagaatgaggcaaagtggtatgaaatcatcgtaaatgttacaactactatgtatgagacacaattttgagatcataaattttgttgtaatcgtatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23457536 gggtgagaatgaggcaaagtggtatgaaatcatcgtaaatgttacaactactatgtatgagacacacttttgagatcataaattttgttgtaatcgtatt 23457437  T
Q  101 aggcataagctaggaatgaattaattaaa 129  Q
    ||||||| | |||||||||||||||||||    
T  23457436 aggcatatgttaggaatgaattaattaaa 23457408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 3880557 - 3880501
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  3880557 aaggctaaaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccct 3880501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 16573373 - 16573435
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||| |||||    
T  16573373 ttaaaggctaaaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggt 16573435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 45618284 - 45618342
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||| ||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  45618284 aggctaatatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggt 45618342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 22204055 - 22204112
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||||||    
T  22204055 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggt 22204112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 42359405 - 42359348
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  42359405 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctggt 42359348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 17281568 - 17281628
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| || |||| || ||| |||||||||||||||||| ||||||||||||||    
T  17281568 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggt 17281628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 17326795 - 17326739
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||||||    
T  17326795 aaggcttaaatatggttttggtccctccaaatatagggcatttgggttttggtccct 17326739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 17370070 - 17370130
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| || |||| || ||| |||||||||||||||||| ||||||||||||||    
T  17370070 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggt 17370130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 33137289 - 33137230
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||| | ||| |||||||||||| |||||||||| |||||||||    
T  33137289 aaggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccctggt 33137230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 3879085 - 3879143
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| |||||||||||| ||||| ||||||||||||||    
T  3879085 aggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggt 3879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 17371901 - 17371847
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||| | ||| |||||||| ||||||||||||||||||||||||    
T  17371901 taaaatatgcttttgatccctgcaaatataacgaatttgggttttggtccctggt 17371847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 19674413 - 19674471
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| | | |||||||||||| |||| |||||||||||||||    
T  19674413 aggctaaaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggt 19674471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 32699373 - 32699319
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    
T  32699373 ggctaaaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccct 32699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 41933817 - 41933870
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtcc 182  Q
    ||||||||||||| |||||||  || |||||||||||| |||||||||||||||    
T  41933817 aggctaaaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 29059702 - 29059770
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| |||||||||||||||||| |||| || ||| |||||||| |||||||| |||  ||||||||||    
T  29059702 aatttattaaaggctaaaatatgtttttcgtccctgcaaatataacgaatttgagttccggtccctggt 29059770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 35054665 - 35054713
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtc 181  Q
    ||||||||| |||| || ||| |||||||||||||||||||||||||||    
T  35054665 taaaatatgattttagtccctgcaaatatagcgaatttgggttttggtc 35054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 42848022 - 42848058
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42848022 ttaaaggctaaaatatggttttggttcctgcaaatat 42848058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 43231075 - 43231119
Alignment:
Q  117 tgaattaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||    
T  43231075 tgaatttattaaaggctaaaatatggttttggtccctgcaaatat 43231119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 19675679 - 19675624
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||| ||||||| ||| |||||||| ||| ||||| ||||||||||||    
T  19675679 ggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccctg 19675624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 47359516 - 47359571
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||| |||| |||| | ||||||||||||||||| ||||| |||||||||    
T  47359516 ctaaaatatgtttttcgttcttgcaaatatagcgaatttgagttttagtccctggt 47359571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 38167829 - 38167779
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    ||||||||  ||||||| |||||||||||| |||||||||||||| |||||    
T  38167829 taaaatatatttttggtccctacaaatataacgaatttgggttttagtccc 38167779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 40198574 - 40198631
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||    ||| |||||||||||| ||||||||||||||||||||    
T  40198574 aaaggctaaaatatgcttttc---cctgcaaatatagcgagtttgggttttggtccctggt 40198631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 44705299 - 44705349
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggt 180  Q
    |||||||||||| |||||||  || ||||||||| ||||||||||||||||    
T  44705299 ggctaaaatatgtttttggtctctgcaaatatagtgaatttgggttttggt 44705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 45619791 - 45619733
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || ||| |||||||||||| ||| ||||||| ||||||||    
T  45619791 aggctaaaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccctggt 45619733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 54121760 - 54121702
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| ||||||  |||| ||||||||||||||||||||    
T  54121760 aggctaaaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggt 54121702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 31812215 - 31812182
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||| |||||||    
T  31812215 aaggctaaaatatggttttggttcctgcaaatat 31812182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 34659704 - 34659761
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||  ||||||||||||||    
T  34659704 aaggctaaaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 13530718 - 13530682
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  13530718 ttaaaggctaaaatatggttttggtccctgcaaatat 13530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 29499177 - 29499213
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  29499177 ttaaaggctaaaatatggttttggtccctgcaaatat 29499213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 41935126 - 41935078
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtc 181  Q
    ||||||||| ||||||| ||| |||||||| ||| ||||||||||||||    
T  41935126 taaaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 42358029 - 42358089
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| ||| |||||||||  | |||| |||||| ||||||||    
T  42358029 aaaggctaaaatatgtttttggtccctgcaaatataggaagtttgagttttgatccctggt 42358089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 51738136 - 51738168
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||| |||||||||||    
T  51738136 aggctaaaatatggttttggtccctacaaatat 51738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 54120759 - 54120811
Alignment:
Q  135 aaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||| |||||||| || |||||||||||| |||| |||||||| ||||||    
T  54120759 aaatatgtttttggtttcttcaaatatagcgagtttgagttttggttcctggt 54120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 17976761 - 17976818
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17976761 ggcttaaatatggttttggttcctgcaaatatagcgaatttgggttttggtccctggt 17976818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 9774950 - 9774890
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  9774950 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggt 9774890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 35721094 - 35721158
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  35721094 aattataggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggt 35721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 17977620 - 17977561
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  17977620 aaggcttaaatatggttttggtccctgcaaatatagcgaatttgggttttggtccttggt 17977561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 27264285 - 27264218
Alignment:
Q  120 attaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| ||| ||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  27264285 attatttataggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttggtccctggt 27264218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 37395631 - 37395690
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  37395631 aaggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggt 37395690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 20722472 - 20722529
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||    
T  20722472 ggctaaaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccctggt 20722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 20723751 - 20723690
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||| ||||| |||||||||    
T  20723751 taaaggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccctggt 20723690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 27816774 - 27816722
Alignment:
Q  135 aaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  27816774 aaatatggttttggtccctgcaaatatagccaatttgggttttggtccctggt 27816722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 48334192 - 48334136
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||    
T  48334192 aggctaaaatatgcttttggtccctacaaatatagcgaatttgagttttggttcctg 48334136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 11711318 - 11711256
Alignment:
Q  124 attaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||    
T  11711318 attaatggctaaaatatgtttttggtccctgcaaatatagcgaatttggg-tttggtccctggt 11711256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 26863858 - 26863917
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| || ||||||| ||| ||||||||||||||||| |||||||||||||||    
T  26863858 aaggctaaaatgtgtttttggtccctgcaaatatagcgaatttgagttttggtccctggt 26863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 27262906 - 27262965
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||||    
T  27262906 aaggctaaaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccctggt 27262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 27815439 - 27815498
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||| |||||||||| |||| ||| |||||||||| ||||||||||||||||||||||    
T  27815439 aaggcttaaatatggttctggtccctgcaaatatagccaatttgggttttggtccctggt 27815498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 35911949 - 35911890
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||| ||||    
T  35911949 aaggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggt 35911890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 34934807 - 34934749
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || ||| |||||||||||||||||||||||||||| ||||    
T  34934807 aggctaaaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggt 34934749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 47038861 - 47038923
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||| |||| || ||| |||||||||| | ||||||||||||||||||||    
T  47038861 ttaaaggctaaaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggt 47038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 24427428 - 24427371
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| |||||||||||||||| |||| ||||| |||||||||    
T  24427428 ggctaaaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggt 24427371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 37396899 - 37396842
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||| ||||    
T  37396899 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggt 37396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 46075109 - 46075052
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||    
T  46075109 ggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccctggt 46075052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 24609919 - 24609973
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||| ||||||| ||| ||||||| |||| |||||||||||||||||    
T  24609919 ggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccct 24609973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 35722345 - 35722287
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||| |||||||| |||||    
T  35722345 aggctaaaatatgtttttggtccctgtaaatatagcgaatttggattttggtctctggt 35722287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 39163084 - 39163026
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||| ||||  |||||||||||||||||||    
T  39163084 aggctaaaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccctggt 39163026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 45979556 - 45979506
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttgg 179  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||| |||||||    
T  45979556 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 46073884 - 46073942
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| |||||||||| |||||||||||| |||||||||    
T  46073884 aggctaaaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccctggt 46073942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 23470028 - 23469971
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| ||| ||||||| ||||||||    
T  23470028 ggctaaaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccctggt 23469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 13074635 - 13074576
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||  ||||||||||| |||||||  ||| |||| |||||||||||||||    
T  13074635 aaggctaaaatatatttttggttcctgcaaatatgacgagtttgagttttggtccctggt 13074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 50164401 - 50164460
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| ||||||| |||| |||| |||||||||| ||||    
T  50164401 aaggctaaaatatgcttttggtccctgcaaatatggcgagtttgagttttggtccttggt 50164460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 9774040 - 9774094
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||||| ||| |||||||| ||| |||| |||||||||||||||    
T  9774040 taaaatatgtttttggtccctgcaaatataacgagtttgagttttggtccctggt 9774094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 26865252 - 26865186
Alignment:
Q  121 ttaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||  |||||||||||  |||||||  || |||||||||||||||||| |||| |||||||||    
T  26865252 ttaattaggggctaaaatatatttttggtctctgcaaatatagcgaatttggattttagtccctggt 26865186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 30724075 - 30724017
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || ||| |||||||| | |||||| |||||||||||||||    
T  30724075 aggctaaaatatgcttttcgtccctgcaaatataacaaatttgagttttggtccctggt 30724017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 35910652 - 35910709
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||||||  |||| ||||||||||||||||    
T  35910652 aggctaaaatatgattttggt-cctgcaaatatagcatatttcggttttggtccctggt 35910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 11710549 - 11710610
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||| ||||| | |||  ||||||| |||  |||||||||||||||||||    
T  11710549 taaaggctaaaatatgtttttgatccctgtaaatataacgaggttgggttttggtccctggt 11710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 48589022 - 48588965
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||||| ||||||| |||  |||||| | || ||||||||||||||||||    
T  48589022 aaggctaaaatatgtttttggtccctgtaaatatggtgagtttgggttttggtccctg 48588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 48594109 - 48594052
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||||| ||||||| |||  |||||| |||| ||||||||||| ||||||    
T  48594109 aaggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 48598720 - 48598663
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||||| ||||||| |||  |||||| |||| ||||||||||| ||||||    
T  48598720 aaggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48598663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 51240121 - 51240174
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||| |||||||  || |||||||||||||||||| ||||| ||||||    
T  51240121 ctaaaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctg 51240174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 26865048 - 26865020
Alignment:
Q  304 agtggcattttacattattttaaatattt 332  Q
    |||||||||||||||||||||||||||||    
T  26865048 agtggcattttacattattttaaatattt 26865020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 47819601 - 47819565
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  47819601 ttaaaggctaaaatatggttttggtccctgcaaatat 47819565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 3936572 - 3936635
Alignment:
Q  124 attaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  3936572 attaaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctggt 3936635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 4565392 - 4565450
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||    
T  4565392 aggctaaaatatgtttttagtccctacaaatatagcgagtttgggttttggtccctggt 4565450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 15599764 - 15599818
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  15599764 aggctaaaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 27571191 - 27571131
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||||||||| ||||||||    
T  27571191 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttgatccctggt 27571131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 3954051 - 3954109
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| | | |||||||| ||||||||||||||||||||||||    
T  3954051 aggctaaaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccctggt 3954109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 31540495 - 31540553
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||| ||||||    
T  31540495 aggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtacctggt 31540553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 14809165 - 14809217
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||| ||||| | |||||||||||||||||||||| |||||||||||    
T  14809165 ctaaaatatgtttttgatccctacaaatatagcgaatttggattttggtccct 14809217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 34911890 - 34911833
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||||| ||||| |||||    
T  34911890 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttggattttgatccct 34911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 3938120 - 3938062
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || ||| |||||||||| | ||| ||||||||||||||||    
T  3938120 aggctaaaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggt 3938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 5917115 - 5917157
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||    
T  5917115 aattaattataggctaaaatatggttttggtccctgcaaatat 5917157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Original strand, 27570253 - 27570283
Alignment:
Q  305 gtggcattttacattattttaaatatttaaa 335  Q
    |||||||||||||||||||||||||||||||    
T  27570253 gtggcattttacattattttaaatatttaaa 27570283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 1381237 - 1381278
Alignment:
Q  120 attaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||| ||||||||||||||||||||||| ||| |||||||    
T  1381237 attaataaaaggctaaaatatggttttggtccctgcaaatat 1381278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 5104007 - 5103970
Alignment:
Q  124 attaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  5104007 attaatggctaaaatatggttttggttcctgcaaatat 5103970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 18258160 - 18258217
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||||||||||||| ||| ||||||| ||  |||| |||||| |||||||    
T  18258160 aaggctaaaatatggttttggtccctgcaaatatggctcattttggttttagtccctg 18258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 31541681 - 31541624
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||| | ||| |||||||| ||||||| |||||| |||||||||    
T  31541681 ggctaaaatatgtttttgatccctgcaaatataacgaattttggtttttgtccctggt 31541624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 25979312 - 25979253
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  25979312 aaggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctggt 25979253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 1777465 - 1777526
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||||    
T  1777465 taaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctggt 1777526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 1778849 - 1778792
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||    
T  1778849 ggctaaaatatgcttttggttcctgcaaatatagcgactttgggttttggtccttggt 1778792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 25977859 - 25977927
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||  ||||||||||||| ||||||| ||| ||||||||| || ||||||||||||||||||||    
T  25977859 aattaattttaggctaaaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccctggt 25977927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 20245366 - 20245307
Alignment:
Q  129 aggctaaaatatggttttgg-ttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  20245366 aggctaaaatatggtttttgattcctgcaaatatagcgaatttgggttttagtccctggt 20245307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 2412488 - 2412430
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||||||    
T  2412488 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggt 2412430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 8809593 - 8809654
Alignment:
Q  127 aaaggctaaaatatggttttggttccta-caaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| |||  |||||||| ||||||||||||||||||||||||    
T  8809593 aaaggctaaaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccctggt 8809654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 12067000 - 12067051
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||| ||||||| |||||||||||| |||||||| ||||||||||||    
T  12067000 taaaatatgtttttggtccctacaaatataacgaatttgagttttggtccct 12067051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 25283331 - 25283274
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| |||||||  || ||||||||||||||||| |||||| ||||||||    
T  25283331 ggctaaaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccctggt 25283274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 29794376 - 29794321
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||| |||||||| ||||    
T  29794376 aggctaaaatatg-ttttggtccctgcaaatatagcgaatttgagttttggttcctg 29794321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 23861751 - 23861809
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||| | || ||||| ||||||||||||||    
T  23861751 aggctaaaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggt 23861809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 36837834 - 36837780
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||  |||||||  || |||||||||||| ||||||||||||||||||||    
T  36837834 taaaatatatttttggtctctgcaaatatagcgagtttgggttttggtccctggt 36837780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 43824159 - 43824217
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||| ||||||||| |||| || ||| |||||||||| |||||| ||||||||||||    
T  43824159 taaaggttaaaatatgtttttcgtccctgcaaatatagcaaatttgagttttggtccct 43824217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 11088739 - 11088682
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| |||| || | | ||||||||||||||||| |||||||| ||||||    
T  11088739 ggctaaaatatgtttttcgtccatgcaaatatagcgaatttgagttttggttcctggt 11088682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 12067040 - 12067085
Alignment:
Q  142 gttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||| ||||||||||||| ||||||| ||||||||| |||||    
T  12067040 gttttggtccctacaaatatagggaatttgagttttggtcactggt 12067085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 17302145 - 17302112
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||| |||||||    
T  17302145 aaggctaaaatatggttttggttcctgcaaatat 17302112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 19604978 - 19604921
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| |||  |||||| ||  |||||||||||||||||||||    
T  19604978 ggctaaaatatgtttttggtccctgtaaatatggctcatttgggttttggtccctggt 19604921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 12067222 - 12067250
Alignment:
Q  304 agtggcattttacattattttaaatattt 332  Q
    |||||||||||||||||||||||||||||    
T  12067222 agtggcattttacattattttaaatattt 12067250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 24754219 - 24754171
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttt 176  Q
    |||| ||||||||| ||||||| ||| ||||||| ||||||||||||||    
T  24754219 aaggttaaaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 30215872 - 30215816
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||||||||||| ||| |||||||| ||  ||| |||||| |||||||    
T  30215872 aggctaaaatatggttttggtccctgcaaatatatcgcgttttggttttagtccctg 30215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 31644836 - 31644872
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  31644836 ttaaaggctaaaatatggttttggtccctgcaaatat 31644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 8e-18; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 345957 - 345868
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggtnnnnnnnnntttgaaatcaatccctgcaaaa 218  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||    
T  345957 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctagtaattttttttttgaaatcaatccctgcaaaa 345868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 344936 - 344994
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| ||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  344936 aggctcaaatatgattttggtccctgcaaatatggcgagtttgggttttggtccctggt 344994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 374335 - 374389
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||| ||||| | ||| |||||||||||| |||||||||||||||||    
T  374335 ggctaaaatatgattttgatccctgcaaatatagcgagtttgggttttggtccct 374389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 376429 - 376381
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggtttt 177  Q
    ||||||||||||| ||||||| ||| |||||||||||| ||||||||||    
T  376429 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgggtttt 376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 39820664 - 39820606
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  39820664 aggctaaaatatggttttggtccctgcaaatatagcgagtttgggttttggtccctggt 39820606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 47433869 - 47433811
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  47433869 aggctaaaatatggttttggtccctgcaaatatagcgaatttgagttttggtccctggt 47433811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 53121292 - 53121359
Alignment:
Q  120 attaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||| |||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||||||    
T  53121292 attaatttaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggt 53121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 40477438 - 40477379
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||||||| ||||||| ||| |||||||| ||| |||||||||||||||||    
T  40477438 ttaaaggctaaaatatgattttggtccctgcaaatataacgagtttgggttttggtccct 40477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 52401015 - 52401074
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  52401015 aaggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctggt 52401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 54437527 - 54437472
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  54437527 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttggtccct 54437472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 52403184 - 52403126
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  52403184 aggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccctggt 52403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 52708676 - 52708619
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| |||||||||||||| |||||    
T  52708676 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtctctggt 52708619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 20488368 - 20488423
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||| ||||||| ||| ||||||| | |||||||||||||||||||||||    
T  20488368 ctaaaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccctggt 20488423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 46026075 - 46026130
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||| ||||||| ||| |||||||||||| ||||| |||||||||||    
T  46026075 aggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccct 46026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 39819307 - 39819369
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||| ||||||||||||||| || ||| |||||||||||| ||||  ||||||||||||||    
T  39819307 ttaaagcctaaaatatggttttagtccctgcaaatatagcgagtttgaattttggtccctggt 39819369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 46104343 - 46104400
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| |||| ||||| |||||||||    
T  46104343 ggctaaaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccctggt 46104400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 15782765 - 15782721
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggtttt 177  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  15782765 taaaatatgtttttggtccctacaaatatagcgaatttgagtttt 15782721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 20489416 - 20489360
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| ||||||| ||| |||||||  ||| ||||||||||||||||||||    
T  20489416 gctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggt 20489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 20585704 - 20585648
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||| ||||| | ||| |||||||||||| ||||| ||||||||||||    
T  20585704 aggctaaaatatgtttttgatccctgcaaatatagcgagtttggattttggtccctg 20585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 42446525 - 42446577
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtc 181  Q
    ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||    
T  42446525 aggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtc 42446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 43734103 - 43734043
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||  |||||||| | |||||||||| | |||||||||||||| |||||    
T  43734103 aaaggctaaaatatgcgtttggttcttgcaaatatagcaagtttgggttttggtctctggt 43734043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 45267306 - 45267362
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| ||||| | ||| |||||||||||| |||| |||||||||||||||    
T  45267306 gctaaaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccctggt 45267362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 46106699 - 46106608
Alignment:
Q  254 ttttactgagttggcccattttcgcatatgtggcaggtgttgaccgtacta----------gtggcattttacattattttaaatatttaaa 335  Q
    |||||| || |||||||||||| |||||||||||||||| |||| | ||||          |||||||||||||||||||||||||||||||    
T  46106699 ttttaccgatttggcccatttttgcatatgtggcaggtgctgacaggactatcatgtacatgtggcattttacattattttaaatatttaaa 46106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 52707539 - 52707591
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||| ||||||| | | ||||||||||||||||| |||||||||||||    
T  52707539 taaaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctg 52707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 46027478 - 46027419
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||  ||||||||||||||    
T  46027478 aaggctaaaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggt 46027419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 976779 - 976837
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| ||||||||||||||||  ||||| |||||||||    
T  976779 aggctaaaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccctggt 976837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 3416486 - 3416552
Alignment:
Q  121 ttaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||| |||||||||||||| ||||| | |||  ||||||||| | ||||| ||||||||||||||    
T  3416486 ttaatttaaggctaaaatatgattttgatccctgtaaatatagcaagtttggtttttggtccctggt 3416552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 22508738 - 22508792
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||||| ||| |||||||||||| |||| |||||||||| ||||    
T  22508738 taaaatatgattttggtccctgcaaatatagcgagtttgagttttggtccttggt 22508792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 25615968 - 25616006
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  25615968 aattaaaggctaaaatatggttttggtccctgcaaatat 25616006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 35936778 - 35936812
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatata 162  Q
    |||||||||||||||||||||| ||||||||||||    
T  35936778 aaggctaaaatatggttttggtccctacaaatata 35936812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 40476222 - 40476272
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtc 181  Q
    ||||||||||| ||||||| ||| |||||||||||| ||||| ||||||||    
T  40476222 gctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtc 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 45268630 - 45268572
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||  | ||| |||||||||| | ||||||||||||||||||||    
T  45268630 aggctaaaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccctggt 45268572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 55345065 - 55345123
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||| ||||||||| |||||||  ||||||||||| |||||||||| |||||| ||||    
T  55345065 aaaggttaaaatatgtttttggtgtctacaaatataacgaatttgggctttggttcctg 55345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 4705681 - 4705738
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||| | ||| ||||||| |||| ||| ||||||||||||||||    
T  4705681 ggctaaaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccctggt 4705738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 11914888 - 11914835
Alignment:
Q  134 aaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| || |||| || ||| |||||||||||||||||||||||||| ||||||    
T  11914888 aaaatgtgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggt 11914835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 20802847 - 20802896
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttg 178  Q
    ||||||||||||| || | || |||||||||||||||| |||||||||||    
T  20802847 aggctaaaatatgtttctagtccctacaaatatagcgagtttgggttttg 20802896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 41780870 - 41780813
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||||| ||||| | |||| ||||||||| | ||||||||| |||||||    
T  41780870 aaaggctaaaatatgtttttgatccctaaaaatatagcaagtttgggtttcggtccct 41780813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 43641143 - 43641200
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| |||| || ||| |||||||||||| ||||| || |||||||||||    
T  43641143 ggctaaaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggt 43641200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 15979702 - 15979670
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||| |||||||||||    
T  15979702 aggctaaaatatggttttggtccctacaaatat 15979670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 28452377 - 28452345
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||| |||||||||||    
T  28452377 aggctaaaatatggttttggtccctacaaatat 28452345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 32637246 - 32637190
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| ||||||| |||  |||| |||||| ||||||||||||| ||||||    
T  32637246 gctaaaatatgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggt 32637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 44507860 - 44507808
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggt 180  Q
    |||||||||||||| ||||||| ||| |||||||||||| ||||  |||||||    
T  44507860 aaggctaaaatatgattttggtccctgcaaatatagcgagtttgaattttggt 44507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 51004131 - 51004195
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    |||||| || ||||||||||||| |||| |  |||  |||||| |||||||||||||||||||||    
T  51004131 aattaaatataggctaaaatatgtttttagaccctgtaaatatggcgaatttgggttttggtccc 51004195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 20897556 - 20897499
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  20897556 ggctaaaatatggttttggtccctgcaaatatagtgaatttgggttttggtccctggt 20897499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 21953205 - 21953263
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||    
T  21953205 aggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccctggt 21953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 16995448 - 16995508
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| ||| ||||||||  |||||||||||||||||||||||    
T  16995448 aaaggctaaaatatgtttttggtccctgcaaatataaagaatttgggttttggtccctggt 16995508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 20391210 - 20391268
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||| ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||    
T  20391210 taaaggttaaaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccct 20391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 34998201 - 34998143
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||    
T  34998201 aggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggt 34998143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 18810532 - 18810589
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| ||||||||| || ||||||||||||||||||||    
T  18810532 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggt 18810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 21165246 - 21165303
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||||    
T  21165246 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggt 21165303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 3276366 - 3276421
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||| |||| ||||||    
T  3276366 aggctaaaatatgtttttggtccctgcaaatatagcgaatttggattttagtccct 3276421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 17517369 - 17517311
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||| |||| |||| |||||||||||||||    
T  17517369 aggctaaaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggt 17517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 26421907 - 26421845
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||| |||||||  || ||||||||||||||||| ||||| |||||||||    
T  26421907 ttaaaggctaaaacatgtttttggtctctgcaaatatagcgaatttgagttttagtccctggt 26421845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 34995113 - 34995171
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| ||||||||||||||||| |||||||| ||||||    
T  34995113 aggctaaaatatgcttttgatccctgcaaatatagcgaatttgagttttggttcctggt 34995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 1972400 - 1972457
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||| |||||||||||||||| ||| |||||    
T  1972400 ggctaaaatatgtttttggtccctgcaaataaagcgaatttgggttttagtctctggt 1972457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 20393327 - 20393270
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||| | ||| ||||||||||||||||||||||  |||||||||    
T  20393327 ggctaaaatatgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggt 20393270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 29291358 - 29291414
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||| ||||||| | | ||||||| |||| ||||||||||||||||||    
T  29291358 aggctaaaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 1974211 - 1974156
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||| ||||| | | | ||||||||||||||||| |||||||||||||    
T  1974211 ggctaaaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccctg 1974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 20895954 - 20896005
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggtttt 177  Q
    ||||| |||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  20895954 taaagactaaaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 17516159 - 17516217
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||| |||||||||| ||||||| ||| ||||||| | || ||||||||||||||||||    
T  17516159 aaagactaaaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctg 17516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 161
Target Start/End: Complemental strand, 23629101 - 23629071
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||||||||    
T  23629101 gctaaaatatggttttggttcctacaaatat 23629071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 1171715 - 1171655
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||| ||||||||| ||||| | ||| |||||||| ||| ||||| ||||||||||||    
T  1171715 ttaaaggttaaaatatgtttttgatccctgcaaatataacgagtttggtttttggtccctg 1171655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 26419526 - 26419570
Alignment:
Q  143 ttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||    
T  26419526 ttttggtccctacaaatataacaagtttgggttttggtccctggt 26419570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 41693638 - 41693702
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||||| ||||| | ||| ||||||| |||||||||||||||||||||||||    
T  41693638 aattaaaggctaaaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccctggt 41693702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 24195602 - 24195664
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||| ||||||||    
T  24195602 ttaaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggt 24195664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 31848204 - 31848146
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||    
T  31848204 aggctaaaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccctggt 31848146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 32197969 - 32197911
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||    
T  32197969 aggctaaaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggt 32197911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 13418948 - 13419007
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||||||||    
T  13418948 aaggctaaaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccctggt 13419007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 43869965 - 43869914
Alignment:
Q  136 aatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccctggt 43869914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 24197163 - 24197105
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||| |||||||| ||||||    
T  24197163 aggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggt 24197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 32544830 - 32544776
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||    
T  32544830 taaaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggt 32544776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 42254950 - 42255015
Alignment:
Q  122 taattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||||||||| ||||||| |||  |||||| |||| |||| |||||||||||||||    
T  42254950 taattaaaggctaaaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccctggt 42255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 5611567 - 5611512
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||||    
T  5611567 aggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccct 5611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 12385768 - 12385709
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| ||||||||| ||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  12385768 aaggataaaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggt 12385709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 35212066 - 35212125
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| |||||||  ||| ||||||||||||||||||||    
T  35212066 aaggctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggt 35212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 5234215 - 5234173
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  5234215 aatttattaaaggctaaaatatggttttggtccctacaaatat 5234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 17066424 - 17066482
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||  | ||| |||||||||||| ||||||||||||||||||||    
T  17066424 aggctaaaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccctggt 17066482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 32196685 - 32196739
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||| ||||||| ||| ||||||||||| |||||| ||||||||||||    
T  32196685 gctaaaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctg 32196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 554242 - 554298
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    ||||||||||||||  | ||||| ||| |||||||||||| ||||||||||||||||    
T  554242 aaaggctaaaatataatattggtccctgcaaatatagcgagtttgggttttggtccc 554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 5610149 - 5610213
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||||||| ||||| | ||| |||||||| |||||||||||||| ||| |||||    
T  5610149 aattaaaggttaaaatatgcttttgatccctgcaaatataacgaatttgggttttagtctctggt 5610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 38742178 - 38742234
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    ||||| ||||||||| |||| || ||| |||||||||||| ||||||||||||||||    
T  38742178 aaaggttaaaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccc 38742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 11217132 - 11217073
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| ||||||||| ||||||| ||| |||||||||||| ||||  ||||||||||||||    
T  11217132 aaggttaaaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccctggt 11217073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 31489993 - 31489942
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtcc 182  Q
    ||||||||||| ||||||| ||| |||||||| ||| |||||||||||||||    
T  31489993 gctaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtcc 31489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 3975542 - 3975580
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  3975542 aattaaaggctaaaatatggttttggtccctgcaaatat 3975580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 12933418 - 12933476
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||||||||| || ||||  ||||||||||||||    
T  12933418 aggctaaaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccctggt 12933476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 32543483 - 32543537
Alignment:
Q  133 taaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||| ||| ||||    
T  32543483 taaaatatgcttttggtccctacaaatatagcaagtttgggttttgatccttggt 32543537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 40576765 - 40576823
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||  ||||||||| |||||||| |||||    
T  40576765 aggctaaaatatgcttttggtccctgcaaatatgacgaatttggattttggtctctggt 40576823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 41695015 - 41694957
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||  | ||| |||||||||||| |||| |||||||||||||||    
T  41695015 aggctaaaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccctggt 41694957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 1559715 - 1559674
Alignment:
Q  120 attaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||||| || ||| |||||||    
T  1559715 attaattaaaggctaaaatatggttttagtccctgcaaatat 1559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 6911247 - 6911215
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatata 162  Q
    |||||||||||||||||||||||| ||||||||    
T  6911247 ggctaaaatatggttttggttcctgcaaatata 6911215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 9659694 - 9659658
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  9659694 ttaaaggctaaaatatggttttggtccctgcaaatat 9659658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 25092155 - 25092191
Alignment:
Q  125 ttaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  25092155 ttaaaggctaaaatatggttttggtccctgcaaatat 25092191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 11583 - 11524
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  11583 aaggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggt 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 10315 - 10372
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||| ||||    
T  10315 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggt 10372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 30976 - 30909
Alignment:
Q  121 ttaattaa-aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||    
T  30976 ttaattaataggctaaaatatggttttggtccctgcaaatatagtgagtttgggttttggtccctggt 30909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 29728 - 29786
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||| | ||| ||||| ||||||||||||||    
T  29728 aggctaaaatatgcttttggtccctgcaaataaaacgagtttggattttggtccctggt 29786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 22272331 - 22272272
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||    
T  22272331 aaggctaaaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccctggt 22272272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 10717120 - 10717178
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  10717120 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggt 10717178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 10718508 - 10718450
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  10718508 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggt 10718450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 4182623 - 4182679
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| ||||||| |||  ||||||||||||||||||||||||||||||||    
T  4182623 gctaaaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccctggt 4182679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 22534784 - 22534724
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||    
T  22534784 aaaggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggt 22534724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 36588219 - 36588279
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||||    
T  36588219 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggt 36588279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 1385615 - 1385557
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| ||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||    
T  1385615 aggcttaaatatggttttggtccctgcaaatatagccaatttggattttggtccctggt 1385557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 28998052 - 28997998
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||    
T  28998052 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccct 28997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 30123149 - 30123199
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggtttt 177  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  30123149 aaaggctaaaatatgtttttggtccatacaaatatagcgaatttgggtttt 30123199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 38456790 - 38456732
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  38456790 aggctaaaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccctggt 38456732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 38658480 - 38658538
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| || |||| | | |||||||||||||||||||||||||||||||||    
T  38658480 aggctaaaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggt 38658538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 45518020 - 45517962
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||||||    
T  45518020 aggctaaaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 22533314 - 22533374
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| ||||||| |||  | ||||||||| ||||||||||||||||||||    
T  22533314 aaaggctaaaatatgcttttggtccctgtatatatagcgagtttgggttttggtccctggt 22533374  T

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Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 28996835 - 28996891
Alignment:
Q  131 gctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||| ||||||| ||| ||||||||| || ||||||||||||||||||||    
T  28996835 gctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggt 28996891  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 36589449 - 36589389
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||||| |||| |||||| |||||||||||| ||| ||||||||||| ||||    
T  36589449 aaaggctaaaatatgattttagttcctgcaaatatagcgagtttaggttttggtccttggt 36589389  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 1376934 - 1376992
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| ||||||| ||||||| ||| |||||||||| ||||||| ||||||||||||||    
T  1376934 aggcttaaatatgattttggtccctgcaaatatagccaatttggattttggtccctggt 1376992  T

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Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 10292814 - 10292864
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttg 178  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||| ||||||    
T  10292814 aaggctaaaatatgattttggtcccttcaaatatagcgaatttgcgttttg 10292864  T

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Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 22270942 - 22271000
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||| |||| |||||||||    
T  22270942 aggctaaaatatgcttttgatccctgcaaatatagcgaatttggattttagtccctggt 22271000  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 3483635 - 3483688
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||    
T  3483635 ctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 34904572 - 34904511
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||| | ||||||| |||| || ||| |||||||||||||||||||||||||| ||||||    
T  34904572 taaaggttgaaatatgattttagtcccttcaaatatagcgaatttgggttttggttcctggt 34904511  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 14197823 - 14197879
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||||| |||||||||||    
T  14197823 aaggctaaaatatgtttttggtccctgcaaatatggcgagtttggattttggtccct 14197879  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 41847240 - 41847184
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||||||||| |||| ||  || ||||||||||||||||| |||||||||||||    
T  41847240 aggctaaaatatgcttttagtctctgcaaatatagcgaatttgagttttggtccctg 41847184  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 1420501 - 1420446
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||| | ||||||||||    
T  1420501 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctg 1420446  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 8298983 - 8298944
Alignment:
Q  122 taattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  8298983 taattaaaggctaaaatatggttttggtccctgcaaatat 8298944  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 20984514 - 20984479
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||| |||||||||||    
T  20984514 taaaggctaaaatatggttttggtccctacaaatat 20984479  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 11976366 - 11976404
Alignment:
Q  123 aattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  11976366 aattaaaggctaaaatatggttttggtccctgcaaatat 11976404  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 27117980 - 27117922
Alignment:
Q  126 taaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||||||||||||||||| ||| |||||||  |  |||| |||||||||||||    
T  27117980 taaaggctaaaatatggttttggtccctgcaaatatgcctcattttggttttggtccct 27117922  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 30124283 - 30124225
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||||| ||| |||||| ||| | |||| |||||||||||||||    
T  30124283 aggctaaaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccctggt 30124225  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 35115650 - 35115584
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctg 185  Q
    ||||||| | |||||||||||||||||| || |||||||||||| |   ||| ||||||||||||||    
T  35115650 aattaataataggctaaaatatggttttagtccctacaaatatacctcgttttggttttggtccctg 35115584  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 4184038 - 4183981
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| |||| || ||| ||||||||| |  ||||||||||||||||||||    
T  4184038 ggctaaaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggt 4183981  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 9465369 - 9465320
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatatagcgaatttgggtttt 177  Q
    ||||||||| |||| |||| |||||| ||||||||| |||||||||||||    
T  9465369 aaggctaaagtatgtttttagttcctgcaaatatagtgaatttgggtttt 9465320  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 20984140 - 20984177
Alignment:
Q  124 attaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  20984140 attaaaggctaaaatatggttttggtccctgcaaatat 20984177  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 28324183 - 28324150
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||| |||||||||||    
T  28324183 aaggctaaaatatggttttggtccctacaaatat 28324150  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 42429756 - 42429789
Alignment:
Q  128 aaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||| |||||||||||    
T  42429756 aaggctaaaatatggttttggtccctacaaatat 42429789  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 38455449 - 38455501
Alignment:
Q  132 ctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccct 184  Q
    |||||||||| ||||||| | | ||||||||| ||||||| ||||||||||||    
T  38455449 ctaaaatatgtttttggtccttgcaaatatagtgaatttgagttttggtccct 38455501  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 45516394 - 45516454
Alignment:
Q  127 aaaggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||| |||||||||| |||| || | |  |||||||||||||||||||||||||| |||||    
T  45516394 aaagactaaaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggt 45516454  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 119593 - 119650
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||    
T  119593 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccctggt 119650  T

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Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 121044 - 120987
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  121044 ggctaaaatatgcttttggtccctgcaaatataacgagtttgggttttggtccctggt 120987  T

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Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 490 - 433
Alignment:
Q  130 ggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    |||||||||||| ||||||| ||| ||||||||| || ||||||||||||||||||||    
T  490 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggt 433  T

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Target: scaffold0562 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 9921 - 9979
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||||||||||| ||||| | ||| |||||||||||| ||||| ||||||||||||||    
T  9921 aggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggt 9979  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 5388 - 5430
Alignment:
Q  119 aattaattaaaggctaaaatatggttttggttcctacaaatat 161  Q
    |||||||||||||||||||||||||||| || ||| |||||||    
T  5388 aattaattaaaggctaaaatatggttttagtccctgcaaatat 5430  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 202578 - 202632
Alignment:
Q  129 aggctaaaatatggttttggttcctacaaatatagcgaatttgggttttggtccc 183  Q
    ||||||||||||| ||||||| ||| |||||||| ||| ||||| ||||||||||    
T  202578 aggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccc 202632  T

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Target: scaffold0599 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 6639 - 6586
Alignment:
Q  134 aaaatatggttttggttcctacaaatatagcgaatttgggttttggtccctggt 187  Q
    ||||| || |||| || ||| |||||||||||||||||||||||||| ||||||    
T  6639 aaaatgtgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggt 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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