View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_high_83 (Length: 317)
Name: NF3772_high_83
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_high_83 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 24909025 - 24909335
Alignment:
| Q |
7 |
gattattctaaggaagactccaaagaaattgtcaagacactttaatcctttgataaaatcaaattgaagatcaaaggctttgagttcttaaatgatcttt |
106 |
Q |
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| T |
24909025 |
gattattttaaggaagactccaaagaaattgtctagacacttcaatcctttaataaaatcaaattgaagatcaaaggctttaagttcttaaatgatcttt |
24909124 |
T |
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| Q |
107 |
caagtaaaacaaagtgaatatccaaaatgtaagagatcatactcaacctaatgaagacaacaatcataaagcacaaacagttcaatatcttacaaattta |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
24909125 |
caagtaaaacaaagtgaatatccaaaatgtaagagatcatactcaacctaatgaagacaacaatcataaagcacaaacaattcaatatcttacaaattta |
24909224 |
T |
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| Q |
207 |
tctaatggctctttgtactttatttttgtctcattctccaacttctttttcaactatagtattctctccttataagagagaaactatggatagtgtgaaa |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24909225 |
tctaatggctctttgtactttatttttgtctcattctccaacttctttttcaactatagtattctctccttataagagagaaactatggatagtgtgaaa |
24909324 |
T |
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| Q |
307 |
attgttgatct |
317 |
Q |
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||||||||||| |
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| T |
24909325 |
attgttgatct |
24909335 |
T |
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