View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_high_96 (Length: 300)

Name: NF3772_high_96
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_high_96
NF3772_high_96
[»] chr6 (20 HSPs)
chr6 (26-161)||(34883501-34883636)
chr6 (182-289)||(31110759-31110864)
chr6 (187-289)||(17598554-17598656)
chr6 (209-289)||(11427640-11427720)
chr6 (186-289)||(31976247-31976350)
chr6 (178-289)||(23128125-23128236)
chr6 (184-289)||(30341358-30341463)
chr6 (177-289)||(15832567-15832679)
chr6 (185-289)||(15990040-15990144)
chr6 (209-289)||(32869700-32869780)
chr6 (187-289)||(4231548-4231650)
chr6 (187-289)||(15508022-15508124)
chr6 (187-289)||(29857827-29857929)
chr6 (184-289)||(6209463-6209568)
chr6 (192-289)||(22880656-22880753)
chr6 (187-255)||(31109432-31109500)
chr6 (183-289)||(12732478-12732584)
chr6 (186-252)||(22422053-22422119)
chr6 (192-289)||(28536486-28536581)
chr6 (187-289)||(31953028-31953130)
[»] chr3 (32 HSPs)
chr3 (181-289)||(11347920-11348028)
chr3 (187-289)||(26141530-26141632)
chr3 (187-289)||(47531865-47531967)
chr3 (185-289)||(27714889-27714993)
chr3 (185-289)||(41189762-41189866)
chr3 (183-289)||(49607410-49607516)
chr3 (186-289)||(17470404-17470507)
chr3 (187-289)||(51419358-51419460)
chr3 (187-289)||(53982011-53982113)
chr3 (209-289)||(26754717-26754797)
chr3 (185-289)||(54868893-54868997)
chr3 (186-289)||(8956761-8956864)
chr3 (210-289)||(31456712-31456791)
chr3 (187-289)||(33644200-33644302)
chr3 (191-289)||(52629304-52629402)
chr3 (185-289)||(11907369-11907473)
chr3 (241-289)||(25407145-25407193)
chr3 (186-289)||(24699952-24700055)
chr3 (186-289)||(35536625-35536728)
chr3 (185-255)||(11095385-11095455)
chr3 (187-289)||(14623837-14623939)
chr3 (187-289)||(20764913-20765015)
chr3 (192-289)||(13898053-13898150)
chr3 (209-289)||(8076415-8076495)
chr3 (217-289)||(9563029-9563101)
chr3 (185-289)||(33118849-33118953)
chr3 (185-261)||(35093583-35093659)
chr3 (209-289)||(36331327-36331407)
chr3 (209-289)||(48587089-48587169)
chr3 (184-255)||(36707456-36707527)
chr3 (199-245)||(32605956-32606002)
chr3 (187-289)||(45058551-45058652)
[»] chr2 (32 HSPs)
chr2 (182-289)||(42257188-42257295)
chr2 (187-289)||(40613900-40614002)
chr2 (185-289)||(9058478-9058582)
chr2 (181-289)||(38273140-38273248)
chr2 (186-289)||(5574486-5574589)
chr2 (186-289)||(33436210-33436313)
chr2 (183-289)||(45097733-45097839)
chr2 (192-289)||(19930818-19930915)
chr2 (185-289)||(10249380-10249484)
chr2 (182-289)||(33436098-33436205)
chr2 (187-289)||(13438343-13438445)
chr2 (187-289)||(17473020-17473122)
chr2 (187-289)||(27864704-27864806)
chr2 (187-289)||(28381653-28381755)
chr2 (192-289)||(28863460-28863557)
chr2 (186-287)||(32505648-32505749)
chr2 (187-287)||(4060685-4060785)
chr2 (186-285)||(2533123-2533221)
chr2 (187-289)||(38732354-38732456)
chr2 (187-289)||(40701478-40701580)
chr2 (192-289)||(41575142-41575240)
chr2 (209-289)||(2997485-2997565)
chr2 (186-289)||(7465733-7465836)
chr2 (182-289)||(20700810-20700917)
chr2 (186-289)||(36168835-36168938)
chr2 (236-289)||(13365402-13365455)
chr2 (185-289)||(30915461-30915565)
chr2 (184-255)||(38882846-38882916)
chr2 (187-285)||(43490121-43490219)
chr2 (187-252)||(17820039-17820104)
chr2 (237-289)||(3034981-3035033)
chr2 (237-289)||(3154193-3154245)
[»] chr5 (24 HSPs)
chr5 (186-289)||(6679697-6679800)
chr5 (187-289)||(28177775-28177877)
chr5 (186-289)||(2740273-2740376)
chr5 (183-289)||(13811648-13811754)
chr5 (187-289)||(26720516-26720618)
chr5 (187-289)||(26990265-26990367)
chr5 (187-289)||(35943890-35943992)
chr5 (187-287)||(14831814-14831914)
chr5 (185-289)||(15409608-15409712)
chr5 (186-289)||(2252166-2252269)
chr5 (183-289)||(18520882-18520988)
chr5 (187-289)||(35785199-35785301)
chr5 (187-289)||(40145407-40145509)
chr5 (184-289)||(3921263-3921368)
chr5 (183-287)||(31008984-31009088)
chr5 (210-285)||(42414304-42414379)
chr5 (187-289)||(33149636-33149738)
chr5 (187-287)||(20073516-20073616)
chr5 (185-289)||(36732940-36733044)
chr5 (210-289)||(39557515-39557594)
chr5 (199-289)||(33825322-33825412)
chr5 (185-289)||(39688895-39688999)
chr5 (186-255)||(41470448-41470517)
chr5 (209-261)||(16327923-16327975)
[»] chr1 (28 HSPs)
chr1 (184-289)||(32813244-32813349)
chr1 (187-289)||(27564733-27564835)
chr1 (186-287)||(51898683-51898784)
chr1 (186-289)||(37926436-37926539)
chr1 (183-289)||(8346386-8346492)
chr1 (185-289)||(49811525-49811629)
chr1 (183-289)||(5958998-5959104)
chr1 (192-289)||(44548374-44548471)
chr1 (182-286)||(37649193-37649297)
chr1 (185-285)||(38632323-38632423)
chr1 (184-287)||(2581912-2582015)
chr1 (183-289)||(38595150-38595256)
chr1 (187-289)||(41608491-41608593)
chr1 (187-285)||(48716284-48716382)
chr1 (181-289)||(26440728-26440836)
chr1 (187-289)||(43132-43234)
chr1 (187-289)||(9474874-9474976)
chr1 (187-289)||(47452318-47452420)
chr1 (187-289)||(50590998-50591100)
chr1 (192-285)||(26274437-26274530)
chr1 (188-285)||(44453980-44454077)
chr1 (209-289)||(3000341-3000421)
chr1 (209-289)||(50630480-50630560)
chr1 (214-289)||(41758832-41758907)
chr1 (209-287)||(11152378-11152456)
chr1 (236-287)||(3302533-3302584)
chr1 (230-287)||(48489343-48489400)
chr1 (184-256)||(23597122-23597194)
[»] chr7 (33 HSPs)
chr7 (187-289)||(19329842-19329944)
chr7 (192-289)||(3784000-3784097)
chr7 (188-289)||(35522877-35522978)
chr7 (183-287)||(7727902-7728006)
chr7 (185-289)||(19436185-19436289)
chr7 (186-289)||(3434561-3434664)
chr7 (209-289)||(3694389-3694469)
chr7 (186-289)||(22343360-22343463)
chr7 (186-289)||(36361911-36362014)
chr7 (183-289)||(35468853-35468959)
chr7 (184-289)||(40957704-40957809)
chr7 (185-289)||(7389387-7389491)
chr7 (185-289)||(38044195-38044299)
chr7 (210-289)||(8238236-8238315)
chr7 (186-289)||(36362025-36362128)
chr7 (178-289)||(41915732-41915843)
chr7 (187-289)||(21234401-21234503)
chr7 (187-289)||(32564424-32564526)
chr7 (187-289)||(35137533-35137635)
chr7 (187-281)||(46374808-46374902)
chr7 (192-289)||(32951491-32951588)
chr7 (185-289)||(8080381-8080485)
chr7 (185-289)||(36208171-36208275)
chr7 (186-289)||(26296643-26296746)
chr7 (178-289)||(38837208-38837319)
chr7 (182-289)||(40846111-40846218)
chr7 (186-289)||(46033799-46033902)
chr7 (187-289)||(4999512-4999614)
chr7 (187-289)||(38267040-38267142)
chr7 (183-256)||(18207176-18207249)
chr7 (217-289)||(16374822-16374894)
chr7 (183-263)||(45223038-45223118)
chr7 (187-289)||(41423682-41423784)
[»] chr8 (27 HSPs)
chr8 (186-287)||(37038478-37038579)
chr8 (186-289)||(32032724-32032826)
chr8 (183-289)||(5957826-5957932)
chr8 (187-289)||(43414579-43414681)
chr8 (209-289)||(40423941-40424021)
chr8 (187-289)||(15048180-15048281)
chr8 (187-289)||(15197333-15197435)
chr8 (189-289)||(10621085-10621185)
chr8 (187-289)||(504119-504221)
chr8 (187-289)||(1179938-1180040)
chr8 (183-289)||(16056399-16056505)
chr8 (183-289)||(16383373-16383479)
chr8 (209-289)||(14547944-14548024)
chr8 (185-289)||(15258927-15259031)
chr8 (185-289)||(24307791-24307895)
chr8 (187-289)||(12831047-12831149)
chr8 (187-289)||(23122595-23122697)
chr8 (187-289)||(34012294-34012396)
chr8 (185-289)||(4854861-4854965)
chr8 (185-289)||(34307214-34307318)
chr8 (185-289)||(42221513-42221617)
chr8 (187-289)||(30479472-30479574)
chr8 (184-289)||(10284629-10284734)
chr8 (209-289)||(8841430-8841510)
chr8 (186-242)||(25838196-25838252)
chr8 (183-250)||(24307625-24307692)
chr8 (236-289)||(9122234-9122287)
[»] scaffold0321 (1 HSPs)
scaffold0321 (178-289)||(10107-10218)
[»] chr4 (25 HSPs)
chr4 (187-289)||(41236347-41236449)
chr4 (183-289)||(50052426-50052532)
chr4 (187-287)||(50526171-50526271)
chr4 (185-289)||(55475189-55475293)
chr4 (178-289)||(19670714-19670825)
chr4 (186-289)||(47986207-47986310)
chr4 (219-289)||(56300163-56300233)
chr4 (185-285)||(29547961-29548061)
chr4 (185-289)||(32766956-32767060)
chr4 (187-289)||(6034044-6034146)
chr4 (183-289)||(42044365-42044471)
chr4 (184-289)||(29239883-29239988)
chr4 (185-289)||(48183047-48183151)
chr4 (187-289)||(40574779-40574881)
chr4 (186-289)||(44536744-44536846)
chr4 (186-289)||(50813890-50813993)
chr4 (183-289)||(480445-480551)
chr4 (187-289)||(11511460-11511562)
chr4 (187-289)||(31910192-31910294)
chr4 (209-289)||(17983741-17983821)
chr4 (210-289)||(29977908-29977987)
chr4 (187-289)||(3481654-3481756)
chr4 (187-289)||(8343161-8343263)
chr4 (236-289)||(41823931-41823984)
chr4 (187-285)||(54473535-54473633)
[»] scaffold1268 (1 HSPs)
scaffold1268 (187-289)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (187-289)||(927-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (187-289)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (212-289)||(152523-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (210-289)||(17077-17156)


Alignment Details
Target: chr6 (Bit Score: 124; Significance: 8e-64; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 34883501 - 34883636
Alignment:
Q  26 ttccatacatatattgctattttcacccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttact 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  34883501 ttccatacatatattgctattttcacccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttact 34883600  T
Q  126 ttttcattagataaaatatatatgggtcttaccact 161  Q
    |||||||||||||||| |||||||||||||||||||    
T  34883601 ttttcattagataaaacatatatgggtcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 31110864 - 31110759
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||| | || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  282 ctttctct 289  Q
    ||||||||    
T  31110766 ctttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  287 tct 289  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 11427640 - 11427720
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  ||||||||||||||||||||| ||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  286 ctct 289  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 23128236 - 23128125
Alignment:
Q  178 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 277  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||  |||  |||||||  ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  278 cacactttctct 289  Q
    ||||||||||||    
T  23128136 cacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  284 ttctct 289  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 15832567 - 15832679
Alignment:
Q  177 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaa 276  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||  ||||||||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T
Q  277 gcacactttctct 289  Q
      ||| |||||||    
T  15832667 atacattttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  285 tctct 289  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 32869700 - 32869780
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||  ||| ||||  ||||||||||||||| |  ||| ||  |||||||||||||||||||||  |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  287 tct 289  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  287 tct 289  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  287 tct 289  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||  |||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  284 ttctct 289  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 22880753 - 22880656
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||| ||||||||||  |||  |||| || |||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 255  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 12732478 - 12732584
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||   || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  283 tttctct 289  Q
    |||||||    
T  12732578 tttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 252  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 28536581 - 28536486
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||||  | |||| |||| ||  ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  287 tct 289  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 11348028 - 11347920
Alignment:
Q  181 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 280  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||  || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  281 actttctct 289  Q
    |||||||||    
T  11347928 actttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  287 tct 289  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||  |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  287 tct 289  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  285 tctct 289  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||  || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  285 tctct 289  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  283 tttctct 289  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  286 ctct 289  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||  || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  287 tct 289  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  287 tct 289  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 26754717 - 26754797
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | || ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  26754717 ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  285 tctct 289  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  286 ctct 289  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 31456712 - 31456791
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||| ||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  31456712 taggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  287 tct 289  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 52629304 - 52629402
Alignment:
Q  191 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| |||||||   ||||||| |||||||    |  ||| |||||||||||||||||| ||| ||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  285 tctct 289  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 25407193 - 25407145
Alignment:
Q  241 aaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctct 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||| ||||||  ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  286 ctct 289  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  ||| ||||||||||| | |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  286 ctct 289  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 255  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  287 tct 289  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||| | ||||||||  |||||||| ||||||   ||| |||  |||||||||||||||||||||  || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  287 tct 289  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 13898150 - 13898053
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  |||| |||||||||||||||| |||| |||| |   ||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 8076415 - 8076495
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8076415 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 9563029 - 9563101
Alignment:
Q  217 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||| | |||||||| || | |||||||||||||||  |||  |||||||||||||| ||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||  |||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  285 tctct 289  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 35093583 - 35093659
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 261  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| ||||||||||||| ||| ||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcat 35093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||| || |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 48587169 - 48587089
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||    
T  48587169 ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 255  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  199 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 245  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| |||   ||||||||||||||| | || ||||  |||| |||||||||||| |||| |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  287 tct 289  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 42257188 - 42257295
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||  || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  282 ctttctct 289  Q
    ||||||||    
T  42257288 ctttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  287 tct 289  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  285 tctct 289  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 38273248 - 38273140
Alignment:
Q  181 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 280  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||   || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  281 actttctct 289  Q
    |||||||||    
T  38273148 actttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  286 ctct 289  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||||||||||| ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  286 ctct 289  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 45097839 - 45097733
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || |||||||||||||| |||  |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  283 tttctct 289  Q
    |||||||    
T  45097739 tttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 19930915 - 19930818
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||| ||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  285 tctct 289  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 33436205 - 33436098
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  282 ctttctct 289  Q
    ||||||||    
T  33436105 ctttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  287 tct 289  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  287 tct 289  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| |||||||||||||||||||| ||||  |||| || ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  287 tct 289  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||||  | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  287 tct 289  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 28863460 - 28863557
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  286 ct 287  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  287 t 287  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||   || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| |||   ||| ||| |||||||||  ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  287 tct 289  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  287 tct 289  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 41575142 - 41575240
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatgga-tcctgcacaagcacactttctct 289  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| ||||| ||| |||| ||||  ||| ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  286 ctct 289  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 20700810 - 20700917
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||  |||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  282 ctttctct 289  Q
    ||||||||    
T  20700910 ctttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||||||  |||| || ||||||||| ||| ||   ||||||||||| |||||||||  || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  286 ctct 289  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 13365402 - 13365455
Alignment:
Q  236 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||||| |||| |||||||| || ||||||| |||||||||||    
T  13365402 cacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||||||||||| | ||||||   |||| |||||||||||||||  |||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  285 tctct 289  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 255  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||||||||| ||| |||   ||||||| ||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 252  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  237 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||||||| ||| ||||||||| || ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  237 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||||||||||| ||| |||||||| || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  286 ctct 289  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  287 tct 289  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  286 ctct 289  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  283 tttctct 289  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  287 tct 289  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  287 tct 289  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  | |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  287 tct 289  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  287 t 287  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||   || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  285 tctct 289  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  286 ctct 289  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 18520988 - 18520882
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  283 tttctct 289  Q
    |||||||    
T  18520888 tttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  ||||||| |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  287 tct 289  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  287 tct 289  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  284 ttctct 289  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  283 tttct 287  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 285
Target Start/End: Complemental strand, 42414379 - 42414304
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  287 tct 289  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||||  |||| || ||||||| | ||||||| ||||| ||||||||  ||||||| ||  |||| |||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  287 t 287  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  |||||||||||||||||| |  |||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  285 tctct 289  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 33825412 - 33825322
Alignment:
Q  199 atagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||| |||||||||||||||    ||||||  |||| |||||||||||||||| |||| || | | | ||||||||||||||||||    
T  33825412 atagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| |||   ||| |||||||||||||  ||||||  ||||||||||||||| | ||| ||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  285 tctct 289  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 255  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 16327923 - 16327975
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 261  Q
    |||||||||||||||||  ||||||  |||| |||||||||||||||| ||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcat 16327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  284 ttctct 289  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  287 tct 289  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  286 ct 287  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||  || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  286 ctct 289  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 8346492 - 8346386
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  283 tttctct 289  Q
    |||||||    
T  8346392 tttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||   ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  285 tctct 289  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 5959104 - 5958998
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  283 tttctct 289  Q
    |||||||    
T  5959004 tttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 44548471 - 44548374
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 37649193 - 37649297
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  ||||||||||||||||||||| |||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  282 ctttc 286  Q
    |||||    
T  37649293 ctttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  285 t 285  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  284 ttct 287  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 38595150 - 38595256
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  283 tttctct 289  Q
    |||||||    
T  38595250 tttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  287 tct 289  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 289
Target Start/End: Original strand, 26440728 - 26440836
Alignment:
Q  181 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 280  Q
    ||||| |||||| |||| ||||||||  |||| || ||||||| | ||| |||  |||||||||||||||||||||  || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  281 actttctct 289  Q
    |||||||||    
T  26440828 actttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||  |||  ||||  | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  287 tct 289  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  287 tct 289  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||| ||||||  |||  ||||||| ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  287 tct 289  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  287 tct 289  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 26274437 - 26274530
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| ||||||||||||| |  |||  ||||||||||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 285
Target Start/End: Original strand, 44453980 - 44454077
Alignment:
Q  188 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  ||||||||||||||||| ||| | |  |||||||  ||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 3000341 - 3000421
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 50630480 - 50630560
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||||| ||||  |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  50630480 ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 41758832 - 41758907
Alignment:
Q  214 tggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||| | |||||||  ||||||||||||||||||||  ||| ||||| || |||||| ||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 11152456 - 11152378
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 287  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||  |||| | || || |||||||||| ||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 3302584 - 3302533
Alignment:
Q  236 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 287  Q
    |||||||||||||||||||| |||||||||| ||   |||||||||||||||    
T  3302584 cacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  230 gacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 287  Q
    ||||| ||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 256  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  287 tct 289  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 3784000 - 3784097
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 35522877 - 35522978
Alignment:
Q  188 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 287  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  288 ct 289  Q
    ||    
T  35522977 ct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| |||||||||||| ||| ||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  283 tttct 287  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  285 tctct 289  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||  |||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  286 ctct 289  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 3694389 - 3694469
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||| ||||||| ||||| |||  ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  3694389 ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  286 ctct 289  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  286 ctct 289  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 35468959 - 35468853
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| |||||||| | | |||| ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  283 tttctct 289  Q
    |||||||    
T  35468859 tttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||  |||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  284 ttctct 289  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  285 tctct 289  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| ||||||||||||||||| ||   |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  285 tctct 289  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 8238236 - 8238315
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||||| | |||||||  ||||||||||||||||| ||  ||||||||| || ||||||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  286 ctct 289  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 41915732 - 41915843
Alignment:
Q  178 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 277  Q
    ||||||| |||||||||||| ||| |||   ||||||||||||||| |  ||||||   |||||||||||||||| |||  |||||||| || |||||||    
T  41915732 tttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T
Q  278 cacactttctct 289  Q
     |||||||||||    
T  41915832 tacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||   || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  287 tct 289  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  ||||||||||||||||| |||   ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  287 tct 289  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  287 tct 289  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||  || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 32951588 - 32951491
Alignment:
Q  192 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||| ||||||| | |||| || ||||||||| ||| |||| ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  285 tctct 289  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| |||||||   |||||||| |||||||   ||||||  |||||||||| |||||| ||| |||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  285 tctct 289  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||| |||| |||| |||||||||| |||||  |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  286 ctct 289  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 38837208 - 38837319
Alignment:
Q  178 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 277  Q
    |||| |||||||| |||||| |||||||   ||||||||||||||| | ||  |||   |||||||||||||||||||  |||  |||| || |||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  278 cacactttctct 289  Q
    ||||||||||||    
T  38837308 cacactttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 40846218 - 40846111
Alignment:
Q  182 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 281  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| ||||||||||||| ||| ||  | ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  282 ctttctct 289  Q
    ||||||||    
T  40846118 ctttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| |||||||||||||||| ||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  286 ctct 289  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||  |||  |||| || |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  287 tct 289  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||| ||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  287 tct 289  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 256  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  217 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||  ||||||| ||||||||||||||||||||| |||  ||||||   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 45223038 - 45223118
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatat 263  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatat 45223118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | |||||||||||||||| ||| |||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  287 tct 289  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 287
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  286 ct 287  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  286 ctct 289  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 5957826 - 5957932
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||| |||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  283 tttctct 289  Q
    |||||||    
T  5957926 tttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  287 tct 289  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 40424021 - 40423941
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  287 tct 289  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  287 tct 289  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 289
Target Start/End: Complemental strand, 10621185 - 10621085
Alignment:
Q  189 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctc 288  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||   || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  289 t 289  Q
    |    
T  10621085 t 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  287 tct 289  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  287 tct 289  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 16056505 - 16056399
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  283 tttctct 289  Q
    |||||||    
T  16056405 tttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 16383373 - 16383479
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  283 tttctct 289  Q
    |||||||    
T  16383473 tttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 14547944 - 14548024
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||||| | | |||| ||||||||||||  | ||||| |||| |||||||||||| ||| |||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  285 tctct 289  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  285 tctct 289  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  287 tct 289  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  287 tct 289  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  287 tct 289  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| ||||||||  ||||||||||||||| | ||| |||   ||| |||||||||| | |||  || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  285 tctct 289  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  285 tctct 289  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| ||| ||||  ||||||| ||||||||   | ||||  |||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  285 tctct 289  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| |||||||||||| |||   ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  287 tct 289  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    |||||||||||||| |||||||   ||| ||| |||||||   |||||||  ||||||||||| ||||||||  |||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  284 ttctct 289  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 242  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 250  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 9122234 - 9122287
Alignment:
Q  236 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||||| ||  |||  ||||||| |||||||||||||||||||    
T  9122234 cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 10218 - 10107
Alignment:
Q  178 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 277  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||  |||  |||| |  | |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  278 cacactttctct 289  Q
    ||||||||||||    
T  10118 cacactttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  287 tct 289  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 50052532 - 50052426
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  283 tttctct 289  Q
    |||||||    
T  50052432 tttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||  ||||| | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  287 t 287  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  ||||||||||||||||| |||  |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  285 tctct 289  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 19670825 - 19670714
Alignment:
Q  178 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 277  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || |||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T
Q  278 cacactttctct 289  Q
     |||||||||||    
T  19670725 tacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  286 ctct 289  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 56300233 - 56300163
Alignment:
Q  219 atacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctct 56300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||  ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  285 t 285  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||  || |||||||||||||| |||  |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  285 tctct 289  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  287 tct 289  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 42044471 - 42044365
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  283 tttctct 289  Q
    |||||||    
T  42044371 tttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  184 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 283  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||  |||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  284 ttctct 289  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  185 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 284  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  285 tctct 289  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg-tgatcatatggatcctgcacaagcacacttt 285  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||| || | | |||||||| | |||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgct-acatggatcccgaacaagcacacttt 40574877  T
Q  286 ctct 289  Q
    ||||    
T  40574878 ctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  286 ctct 289  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  186 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||||||||||| ||| ||| | |||||||| |||||| |  ||||||  ||||||||||||||||| ||| ||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  286 ctct 289  Q
    ||||    
T  50813893 ctct 50813890  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 480551 - 480445
Alignment:
Q  183 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 282  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  283 tttctct 289  Q
    |||||||    
T  480451 tttctct 480445  T

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Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  |||| || ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  287 tct 289  Q
    |||    
T  11511462 tct 11511460  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  |||||||||||||||||| |   || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  287 tct 289  Q
    |||    
T  31910292 tct 31910294  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  209 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 29977908 - 29977987
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||  ||||||||| ||  ||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  |||||||||||||||||| |  |||  |||| ||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  287 tct 289  Q
    |||    
T  3481754 tct 3481756  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| |||||||||||| |||  |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  287 tct 289  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 41823931 - 41823984
Alignment:
Q  236 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||||||||||||||||||  ||| ||||| || |||||||||||||||||||    
T  41823931 cacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 285  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

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Target: scaffold1268 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  287 tct 289  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  287 tct 289  Q
    |||    
T  929 tct 927  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  187 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 286  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  287 tct 289  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 152523 - 152600
Alignment:
Q  212 ggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    |||||||||||| |  ||||||  ||||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  210 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 289  Q
    ||||| ||||||||||  | ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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