View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_low_106 (Length: 296)
Name: NF3772_low_106
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_low_106 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 37302682 - 37302910
Alignment:
| Q |
19 |
cttgtttgtttatgtcaataagcttcccgtgacagcttatagaaacaatttatatgaaaaagtttaaacatcttttattgtccctctttgactatagaaa |
118 |
Q |
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| T |
37302682 |
cttgtttgtttatgtcaataagcttcccgtgacagcttatagaaacaatttatatgaaaaagtttaaacatcttttattgtccctctttgactatagaaa |
37302781 |
T |
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| Q |
119 |
tagaaagttgcagcaccaaataacacgtgataaagatatatcgggcactatcttttaagcattacttagctaatcgataactccacttcaattatcactt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37302782 |
tagaaagttgcagcaccaaataacacgtgataaagatatatcgggcactatcttttaagcattacttagctaatcgataactccacttcaattatcactt |
37302881 |
T |
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| Q |
219 |
actacattaagttaaagctgttcctattt |
247 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
37302882 |
actacattaagttaaagctgttcctattt |
37302910 |
T |
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