View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_low_135 (Length: 262)

Name: NF3772_low_135
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_low_135
NF3772_low_135
[»] chr4 (42 HSPs)
chr4 (16-262)||(48416011-48416257)
chr4 (20-262)||(34018266-34018508)
chr4 (16-243)||(38283970-38284197)
chr4 (16-262)||(48636899-48637145)
chr4 (16-262)||(52531417-52531642)
chr4 (16-262)||(24150087-24150312)
chr4 (16-262)||(39501063-39501288)
chr4 (16-195)||(52007012-52007190)
chr4 (16-190)||(24044622-24044795)
chr4 (16-160)||(25961554-25961698)
chr4 (16-195)||(19826952-19827130)
chr4 (35-185)||(30392044-30392194)
chr4 (16-180)||(27677536-27677699)
chr4 (16-159)||(40493848-40493991)
chr4 (16-195)||(40794464-40794642)
chr4 (16-195)||(3718586-3718764)
chr4 (16-190)||(15430337-15430508)
chr4 (16-190)||(15436951-15437122)
chr4 (35-262)||(11195070-11195296)
chr4 (37-160)||(29545376-29545499)
chr4 (16-137)||(27691625-27691746)
chr4 (16-159)||(18673552-18673695)
chr4 (16-107)||(19820277-19820368)
chr4 (182-262)||(39494750-39494830)
chr4 (16-185)||(35509437-35509605)
chr4 (16-137)||(40903565-40903686)
chr4 (16-112)||(53094051-53094147)
chr4 (16-190)||(44164250-44164423)
chr4 (17-90)||(12782471-12782544)
chr4 (16-195)||(21419250-21419428)
chr4 (16-104)||(8877983-8878071)
chr4 (16-87)||(8875243-8875314)
chr4 (16-103)||(53010039-53010126)
chr4 (193-252)||(40494004-40494063)
chr4 (39-135)||(8449047-8449143)
chr4 (202-262)||(25961487-25961547)
chr4 (41-107)||(48014538-48014604)
chr4 (92-137)||(56198372-56198417)
chr4 (70-137)||(15812650-15812717)
chr4 (182-262)||(18673697-18673777)
chr4 (70-137)||(29324343-29324410)
chr4 (70-137)||(44809492-44809559)
[»] chr6 (29 HSPs)
chr6 (16-262)||(2378626-2378872)
chr6 (16-262)||(11188397-11188644)
chr6 (20-262)||(11401653-11401895)
chr6 (16-261)||(26942916-26943161)
chr6 (16-262)||(15543406-15543652)
chr6 (16-262)||(30654840-30655086)
chr6 (37-260)||(3597284-3597507)
chr6 (16-262)||(28229991-28230237)
chr6 (18-262)||(19475399-19475643)
chr6 (64-262)||(11729866-11730063)
chr6 (16-262)||(18856506-18856752)
chr6 (16-262)||(24399576-24399822)
chr6 (16-262)||(24409696-24409942)
chr6 (16-262)||(13941959-13942206)
chr6 (16-185)||(6512726-6512895)
chr6 (16-190)||(10289442-10289615)
chr6 (16-176)||(5259419-5259579)
chr6 (16-185)||(28665745-28665913)
chr6 (35-262)||(4511869-4512096)
chr6 (24-180)||(14282013-14282169)
chr6 (35-185)||(11126196-11126346)
chr6 (35-177)||(26898369-26898511)
chr6 (16-185)||(20185219-20185387)
chr6 (16-185)||(22150604-22150772)
chr6 (16-137)||(13004710-13004831)
chr6 (127-262)||(31880319-31880454)
chr6 (95-185)||(28112331-28112421)
chr6 (95-180)||(28108397-28108482)
chr6 (70-137)||(31071825-31071892)
[»] chr5 (23 HSPs)
chr5 (16-262)||(41307008-41307254)
chr5 (16-262)||(26753183-26753429)
chr5 (16-262)||(34831158-34831404)
chr5 (16-261)||(41877246-41877491)
chr5 (16-262)||(12087353-12087599)
chr5 (16-262)||(12058973-12059220)
chr5 (16-262)||(34143695-34143941)
chr5 (16-262)||(40582644-40582890)
chr5 (16-225)||(34133464-34133673)
chr5 (16-195)||(7270479-7270657)
chr5 (16-107)||(30065892-30065983)
chr5 (16-190)||(4100003-4100176)
chr5 (16-158)||(26907936-26908078)
chr5 (16-185)||(26896085-26896254)
chr5 (20-107)||(18239981-18240068)
chr5 (16-107)||(2836924-2837015)
chr5 (16-195)||(33551584-33551762)
chr5 (35-135)||(26292313-26292413)
chr5 (17-176)||(18952174-18952333)
chr5 (16-137)||(17747960-17748081)
chr5 (16-107)||(18032008-18032099)
chr5 (110-185)||(23043658-23043733)
chr5 (57-195)||(17664013-17664151)
[»] chr2 (36 HSPs)
chr2 (20-262)||(37280163-37280405)
chr2 (16-262)||(9185906-9186152)
chr2 (16-262)||(9189135-9189381)
chr2 (16-262)||(24234472-24234718)
chr2 (16-262)||(24237744-24237990)
chr2 (16-262)||(43208372-43208618)
chr2 (16-241)||(25960171-25960396)
chr2 (16-262)||(40780849-40781095)
chr2 (16-258)||(31586388-31586627)
chr2 (16-262)||(8888033-8888258)
chr2 (35-262)||(40259640-40259867)
chr2 (20-262)||(11348382-11348603)
chr2 (16-241)||(1386904-1387130)
chr2 (16-226)||(17876493-17876703)
chr2 (24-262)||(42369201-42369418)
chr2 (87-252)||(37937751-37937916)
chr2 (16-180)||(22020527-22020691)
chr2 (16-195)||(13972376-13972554)
chr2 (16-190)||(5105177-5105349)
chr2 (170-262)||(25955980-25956072)
chr2 (17-185)||(27266242-27266410)
chr2 (35-169)||(12219265-12219399)
chr2 (16-159)||(16791241-16791384)
chr2 (16-190)||(43723151-43723324)
chr2 (16-137)||(6826274-6826395)
chr2 (173-262)||(30148800-30148889)
chr2 (16-160)||(22630321-22630465)
chr2 (16-146)||(30926040-30926170)
chr2 (16-135)||(30189840-30189959)
chr2 (16-137)||(3874791-3874912)
chr2 (45-185)||(5666115-5666254)
chr2 (83-159)||(30148882-30148958)
chr2 (16-159)||(16178607-16178750)
chr2 (182-262)||(16791386-16791466)
chr2 (70-137)||(33310167-33310234)
chr2 (70-137)||(38015019-38015086)
[»] scaffold0427 (1 HSPs)
scaffold0427 (16-262)||(4270-4516)
[»] chr7 (25 HSPs)
chr7 (16-262)||(23225392-23225638)
chr7 (16-262)||(23234545-23234791)
chr7 (24-262)||(4861195-4861433)
chr7 (16-262)||(37166633-37166879)
chr7 (16-262)||(20593660-20593906)
chr7 (46-262)||(11950930-11951125)
chr7 (16-262)||(26136614-26136859)
chr7 (16-262)||(26144994-26145239)
chr7 (16-204)||(3068463-3068651)
chr7 (16-159)||(9405742-9405885)
chr7 (35-185)||(9133264-9133414)
chr7 (16-190)||(4694979-4695152)
chr7 (16-190)||(9865213-9865386)
chr7 (16-137)||(4596495-4596616)
chr7 (35-185)||(10468603-10468753)
chr7 (16-195)||(17730265-17730443)
chr7 (16-180)||(9273606-9273769)
chr7 (16-195)||(9080627-9080805)
chr7 (16-105)||(18563019-18563108)
chr7 (16-190)||(20081204-20081377)
chr7 (16-117)||(13809999-13810100)
chr7 (16-98)||(10344760-10344842)
chr7 (39-133)||(7227038-7227132)
chr7 (70-137)||(13842146-13842213)
chr7 (17-101)||(22612094-22612178)
[»] chr3 (50 HSPs)
chr3 (16-259)||(25584175-25584413)
chr3 (16-262)||(2873044-2873290)
chr3 (16-262)||(30690215-30690461)
chr3 (16-262)||(49743388-49743634)
chr3 (20-262)||(54723221-54723463)
chr3 (20-262)||(43926315-43926557)
chr3 (20-262)||(2778206-2778447)
chr3 (21-262)||(45895860-45896101)
chr3 (21-262)||(24124978-24125220)
chr3 (21-262)||(7486051-7486291)
chr3 (16-252)||(52987895-52988131)
chr3 (16-262)||(32367597-32367843)
chr3 (16-262)||(48064503-48064749)
chr3 (92-261)||(50462094-50462263)
chr3 (16-262)||(12561702-12561949)
chr3 (16-262)||(22417302-22417548)
chr3 (35-262)||(22010850-22011077)
chr3 (16-262)||(11190018-11190252)
chr3 (109-262)||(12535632-12535785)
chr3 (16-226)||(32287792-32288002)
chr3 (20-159)||(2775066-2775204)
chr3 (16-195)||(3840064-3840242)
chr3 (16-188)||(41976570-41976741)
chr3 (21-262)||(24128276-24128497)
chr3 (16-185)||(17040490-17040658)
chr3 (16-190)||(34984321-34984494)
chr3 (35-185)||(46884510-46884660)
chr3 (16-137)||(20729115-20729236)
chr3 (16-195)||(16243422-16243600)
chr3 (16-190)||(29344343-29344516)
chr3 (35-177)||(15195789-15195931)
chr3 (16-160)||(11784347-11784491)
chr3 (16-160)||(54719553-54719697)
chr3 (16-185)||(10881038-10881206)
chr3 (16-137)||(25443328-25443449)
chr3 (16-137)||(43809184-43809305)
chr3 (16-134)||(31548862-31548982)
chr3 (16-155)||(17140995-17141134)
chr3 (173-262)||(2774984-2775073)
chr3 (16-139)||(27091498-27091620)
chr3 (65-180)||(28008564-28008679)
chr3 (16-177)||(30220477-30220637)
chr3 (16-100)||(19305157-19305241)
chr3 (16-102)||(19301973-19302059)
chr3 (57-107)||(22369984-22370034)
chr3 (68-137)||(35751058-35751127)
chr3 (168-262)||(46985768-46985862)
chr3 (68-137)||(47051099-47051168)
chr3 (193-262)||(17140909-17140978)
chr3 (62-134)||(47054532-47054604)
[»] scaffold0250 (1 HSPs)
scaffold0250 (16-262)||(18790-19036)
[»] chr1 (20 HSPs)
chr1 (16-262)||(23022405-23022651)
chr1 (16-262)||(45940811-45941058)
chr1 (70-262)||(37184400-37184592)
chr1 (27-262)||(28110474-28110688)
chr1 (21-262)||(20398270-20398490)
chr1 (16-190)||(41058783-41058956)
chr1 (16-262)||(3797307-3797532)
chr1 (35-185)||(906189-906337)
chr1 (16-195)||(21018947-21019125)
chr1 (35-195)||(49853578-49853737)
chr1 (16-107)||(34732840-34732931)
chr1 (16-180)||(11668507-11668669)
chr1 (16-98)||(34066922-34067004)
chr1 (16-185)||(2404984-2405152)
chr1 (48-133)||(21107782-21107867)
chr1 (64-145)||(13431175-13431256)
chr1 (57-159)||(673539-673642)
chr1 (229-261)||(21858822-21858854)
chr1 (70-137)||(31204358-31204425)
chr1 (70-137)||(45961281-45961348)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-262)||(30489-30735)
[»] chr8 (12 HSPs)
chr8 (19-262)||(16953189-16953411)
chr8 (16-262)||(31284062-31284308)
chr8 (16-262)||(10498695-10498942)
chr8 (16-240)||(8911062-8911285)
chr8 (16-262)||(23620788-23621034)
chr8 (35-185)||(33419121-33419271)
chr8 (16-257)||(2559986-2560227)
chr8 (16-156)||(38248881-38249021)
chr8 (16-226)||(13196276-13196486)
chr8 (35-252)||(21280268-21280485)
chr8 (24-180)||(5980802-5980957)
chr8 (35-195)||(12582468-12582627)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-262)||(68006-68252)
[»] scaffold0084 (2 HSPs)
scaffold0084 (16-262)||(28759-29006)
scaffold0084 (16-160)||(18792-18936)
[»] scaffold0048 (2 HSPs)
scaffold0048 (65-262)||(24216-24414)
scaffold0048 (120-225)||(28472-28577)
[»] scaffold0191 (1 HSPs)
scaffold0191 (35-185)||(1218-1368)
[»] scaffold0065 (1 HSPs)
scaffold0065 (35-180)||(59183-59328)
[»] scaffold0757 (1 HSPs)
scaffold0757 (16-180)||(4830-4993)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-107)||(84790-84881)
[»] scaffold0520 (1 HSPs)
scaffold0520 (16-137)||(4461-4582)
[»] scaffold0807 (1 HSPs)
scaffold0807 (35-158)||(2573-2696)
[»] scaffold0321 (1 HSPs)
scaffold0321 (30-160)||(3506-3636)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-177)||(34817-34954)
[»] scaffold1785 (1 HSPs)
scaffold1785 (35-132)||(820-917)
[»] scaffold0035 (1 HSPs)
scaffold0035 (35-132)||(63430-63527)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 48416011 - 48416257
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48416011 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 48416110  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||||||||||| |||| ||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48416111 tagacttcagcttaaataggcacataatttcgtctaatatcgtgccacgatttaagtaaatcgtgacacgattctccttgaatcgcaaatcactgaatta 48416210  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  48416211 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 48416257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 34018266 - 34018508
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |    
T  34018266 gaaccgatagaaggttgaagaaatcgccctcctagccgtctttaggtcttaaaatcgcactttggtctctccaaatcgtaacccttgtttttggaataga 34018365  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34018366 cttcagcttaaataggcacagaattttgcctaaaatcgtgccacgatttaagtaaatcgtgacacgattctccttgaatcgcaaatcactgaattagggt 34018465  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  34018466 ttcctcagatcgtgccacgattatgccatcgtgacacgatttc 34018508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 38283970 - 38284197
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  38283970 acatgatctgatagaaggttgaagaaattgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacacttgtctttggaa 38284069  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38284070 tagacttcagcttaaataggcacagaatttcgcctaaaattgtgtcacgttttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 38284169  T
Q  216 gggtttcctcagttcgtgccacgattat 243  Q
    |||||||||||| |||||||||||||||    
T  38284170 gggtttcctcagatcgtgccacgattat 38284197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 48637145 - 48636899
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  48637145 acataaactgatagaaggttgaagaaatcaccctcctagccgtctttaggtctcaaaattgcactttgcactctccaaatcgtaacccttgtctttggaa 48637046  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||| |||||||||||||||||||||||||  ||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48637045 tagacttcagcttaaataagcacataatttcgcctaaaatcgtgccacgatttgagtaaatggtgacacgattctccttgaatcgcaaatcactgaatta 48636946  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  48636945 gggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 48636899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 52531417 - 52531642
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  52531417 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacacctgtctttggaa 52531516  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| ||||||||||||||||                     ||||||||||||||||||||||||||||||||||||||    
T  52531517 tagacttcagcttaaataggcacagaatttcgcctaaaatc---------------------gtgccacgattctccttgaatcgcaaatcactgaatta 52531595  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  52531596 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 52531642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24150312 - 24150087
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24150312 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 24150213  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| ||||||||||||||||                     ||| ||||||||||||||||||||||||| ||||||||    
T  24150212 tagacttcagcttaaataggcacagaatttcgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcgctgaatta 24150134  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  24150133 gggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 24150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 39501288 - 39501063
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39501288 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccctgtctttggaa 39501189  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| ||||||||||||||||                     ||| ||||||||||||||||||||||||| ||||||||    
T  39501188 tagacttcagcttaaataggcacaaaatttcgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcgctgaatta 39501110  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  39501109 gggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 39501063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 52007012 - 52007190
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||  |||    
T  52007012 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaatttgtaacccttgttttcagaa 52007111  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  52007112 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttctgcttg 52007190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 24044622 - 24044795
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||    
T  24044622 acatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcagaa 24044721  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| ||||    
T  24044722 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttct 24044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 25961698 - 25961554
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||| |||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25961698 acatgaactggtaaaagagtgaagaaatctcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 25961599  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgt 160  Q
    || ||| |||||||||||||||||||| |||||||||||||||||    
T  25961598 tagactccagcttaaataggcacataaattcgcctaaaatcgtgt 25961554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 19827130 - 19826952
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||   ||    
T  19827130 acatgaactgataaaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcaaaa 19827031  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  19827030 tagtcttcagcttaaataggca-acaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttcttcttg 19826952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 30392194 - 30392044
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||| | ||||| |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  30392194 tgaagaaatcgacatcctagccgtcttgtagtctcaaaatcgcactttgctctcttcaattcgtaacccttgtctttggaatagacttcagcttaaatag 30392095  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||||| || ||| ||||||||||||| ||  ||||||||||||||| ||||    
T  30392094 gcacaaaaattcacctaaaatcgtgtcacattttaagtaaatcgtgacacg 30392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 27677536 - 27677699
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||| |||    
T  27677536 acatgaactgatagaaggttgaagaaatcgtcttcctagccgtctttaggtctcaaaatcgcactttgctctctcccattcgtcacccttgtttttagaa 27677635  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| |||||||||||||||    
T  27677636 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtg 27677699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 40493848 - 40493991
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||| | ||  |||||||   ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  40493848 acatgaactggtataagagtgaagaaatcgcctttctcgccgtcttgtagtctcaaaatcgcactttgctttctcaaaatcgtaacccttgtctttggaa 40493947  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    || |||||||||||||||||||||||| || |||||||||||||    
T  40493948 tagacttcagcttaaataggcacataaattggcctaaaatcgtg 40493991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 40794642 - 40794464
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||  |||    
T  40794642 acatgaactgatagaaggttgaagaattcgccctcctagccgtttttaggtctcaaaatcgcactttgctctctccaattcgtaacatttgttttcagaa 40794543  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  40794542 tagtcttcagcttaaataggca-acaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttctgcttg 40794464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 3718764 - 3718586
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| ||||||||||| |||||| | ||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||  |||    
T  3718764 acatgaattgatagaaggttgaagaaatctccctccgagccgtctttaggtctcaaaatcacattttgctctctccaattcgtaacccttgttttcagaa 3718665  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  3718664 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttctgcttg 3718586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 15430337 - 15430508
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||||||  || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  15430337 acatgaactgata--aggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgtcttcagaa 15430434  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||| ||| |||| ||||    
T  15430435 tagtcttcagcttaaataggca-agaactgctcctaaaattgtggcacgatttaagtaaattgtgacacgtttct 15430508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 15436951 - 15437122
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||||||  || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||    
T  15436951 acatgaactgata--aggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgtcttcagaa 15437048  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||| ||| |||| ||||    
T  15437049 tagtcttcagcttaaataggca-agaactgctcctaaaattgtggcacgatttaagtaaattgtgacacgtttct 15437122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 262
Target Start/End: Complemental strand, 11195296 - 11195070
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||| |||| |||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||| | |||||||    
T  11195296 tgaagaactcgctctcctagccgtcttgag-tctcaaaatcgcactttgctctcttcaaatcgtaacccttgtctttcaaatagacttcaacataaatag 11195198  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg-attctccttgaatcgcaaatcactgaattagggtttcctcagttcgtg 233  Q
    ||  | |||||||||||||||||||| ||| ||||||||||| ||| ||||  |||| | |||||  | ||   |||||||||||||||||||  |||||    
T  11195197 gcctagaatttcgcctaaaatcgtgtcacgttttaagtaaattgtgacacgttttcttc-tgaataacgaacagctgaattagggtttcctcaaatcgtg 11195099  T
Q  234 ccacgattatgccatcgtgtcacgatttc 262  Q
     |||| || |||||||||| |||| ||||    
T  11195098 tcacgtttttgccatcgtgacacgttttc 11195070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 29545376 - 29545499
Alignment:
Q  37 aagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggc 136  Q
    ||||||||||||||||| |||||||   |||||||||||| ||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  29545376 aagaaatcgccctcctagccgtcttgtagtctcaaaatcgaactttgctcttctcaattcgtaacccttgtctttggaatagacttcagcttaaataggc 29545475  T
Q  137 acataatttcgcctaaaatcgtgt 160  Q
    ||| || |||||||||||||||||    
T  29545476 acagaaattcgcctaaaatcgtgt 29545499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 27691625 - 27691746
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||  |||    
T  27691625 acatgaactgatagaatgttgaagaaatcgccctcctagccttctttaggtctcaaaatcgcactttgctctctccaattcgtcacccttgttttcagaa 27691724  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  |||| |||||||||||||    
T  27691725 tagtcttcggcttaaataggca 27691746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 18673552 - 18673695
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||  ||| ||  |||    
T  18673552 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacctctgttttcagaa 18673651  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    ||  |||||||||||||||||||| |||||||||| ||||||||    
T  18673652 tagtcttcagcttaaataggcacagaatttcgccttaaatcgtg 18673695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 19820368 - 19820277
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19820368 acatgaactgataaaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttactctctccaattcgtaacccttgt 19820277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 39494830 - 39494750
Alignment:
Q  182 cacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  39494830 cacgattctccttgaatcgcaaatcgctgaattagggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 39494750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 35509605 - 35509437
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| |||| |||||||||| |||||||||||   |||||||||||||||||||||||||||||| ||||||| |||| ||  |||    
T  35509605 acatgaactagtaaaagagtgaataaatcgcccttctaaccgtcttgtagtctcaaaatcgcactttgctctctccaaaacgtaaccattgttttcagaa 35509506  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||  ||||||||||||||| ||||    
T  35509505 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacaatttaagtaaatcgtgacacg 35509437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 40903565 - 40903686
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| |||||||||||||||||||| | |||||   || | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  40903565 acatgaaatgatagaaggttgaagaaatcgccctcctagctgtcttgtagtgttaaaatcgcactttgctctctccaaatcctaacccttgtgtttggaa 40903664  T
Q  116 tatacttcagcttaaataggca 137  Q
       |||||| ||||||||||||    
T  40903665 ctgacttcatcttaaataggca 40903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 53094147 - 53094051
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttg 112  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||| ||| |||| |||||||| ||||    
T  53094147 acatgaactgatagaaggttgaagaaatcgccctcctagctgtcttgaggtctcaaaatcacactttgctctcttcaattcgtcacccttgtttttg 53094051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 44164423 - 44164250
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || ||||  |||||||| ||||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||| |||| ||  |||    
T  44164423 acatgaactggtaaaagagcgaagaaattgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacctttgttttcagaa 44164324  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| ||||    
T  44164323 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttct 44164250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 12782544 - 12782471
Alignment:
Q  17 catgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctc 90  Q
    |||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  12782544 catgaaatgatagaaggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctc 12782471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 21419428 - 21419250
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||| | ||  |||||||    ||||||||||||||||||||||||| |||||||||| ||||| ||  |||    
T  21419428 acatgaactggtaaaagagtgaagaaatcgccattctcgccgtcttgtaatctcaaaatcgcactttgctctctcaaaatcgtaactcttgttttcagaa 21419329  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  ||||||| |||||| ||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  21419328 tagtcttcagcctaaataagca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttctgcttg 21419250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 8877983 - 8878071
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccct 104  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||   ||| ||||||||||    
T  8877983 acattaacttatagaaggttgaagaaatcgccctcctaaccgtctttaggtatcaaaatcacactttcctcttctcaattcgtaaccct 8878071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 8875243 - 8875314
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctct 87  Q
    ||||||||| ||||||| |||||||||||  ||||||| || ||||||||||||||||||||||||||||||    
T  8875243 acatgaactaatagaaggttgaagaaatcatcctcctagccatctttaggtctcaaaatcgcactttgctct 8875314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 53010039 - 53010126
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccc 103  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   ||||||||||||||| ||||||||||||||| |||||||    
T  53010039 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcaccttgctctctccaaatggtaaccc 53010126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 40494004 - 40494063
Alignment:
Q  193 ttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtg 252  Q
    ||||||||||||  ||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  40494004 ttgaatcgcaaacaactgaattagggtttcctcaaatcgtgtcacgattttgccatcgtg 40494063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 8449047 - 8449143
Alignment:
Q  39 gaaatcgccctcctaaccgtctttaggtctcaaaatcgcac-tttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatagg 135  Q
    ||||||||||| ||| | ||||| ||||||||||||||||| ||||||||||  |||| ||||||||||| |||| ||   |||||| ||||||||||    
T  8449047 gaaatcgcccttctagcagtcttcaggtctcaaaatcgcacttttgctctct-aaaattgtaacccttgtttttgaaactgacttcaacttaaatagg 8449143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 25961547 - 25961487
Alignment:
Q  202 aaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||| ||||||||||||||||||||  ||||| ||||||| |||||||||| |||| ||||    
T  25961547 aaataactgaattagggtttcctcaaatcgtgtcacgattttgccatcgtgacacgttttc 25961487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 48014538 - 48014604
Alignment:
Q  41 aatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    |||||||||||||   ||||| || || ||||||||||||||||||| || ||||||| ||||||||    
T  48014538 aatcgccctcctagaagtcttcagatcacaaaatcgcactttgctctatcaaaatcgtcacccttgt 48014604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 56198417 - 56198372
Alignment:
Q  92 aaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    |||||||||||||||| |||||||   |||||||||||||||||||    
T  56198417 aaatcgtaacccttgtgtttggaactgacttcagcttaaataggca 56198372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 15812650 - 15812717
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  15812650 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 15812717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 18673697 - 18673777
Alignment:
Q  182 cacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||| ||| ||||||||||| | ||||||| |||||||||||   ||||| |||||||   |||||||| |||||||||    
T  18673697 cacgatcctctttgaatcgcaatttactgaatcagggtttcctccaatcgtgtcacgattcgaccatcgtgacacgatttc 18673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 29324410 - 29324343
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  29324410 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 29324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 44809492 - 44809559
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  44809492 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 44809559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 2378872 - 2378626
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2378872 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccctgtctttggaa 2378773  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2378772 tagacttcagcttaaataggcacagaatttcgcctaaaatcgtgccacgatttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 2378673  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||    
T  2378672 gggtttcctcagatcgtgccacgattatgccatcgtgactcgatttc 2378626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 11188397 - 11188644
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccc-ttgtctttgga 114  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11188397 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccattgtctttgga 11188496  T
Q  115 atatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatt 214  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11188497 atagacttcagcttaaataggcacagaatttcgcctaaaatggtgccacgatttaagtaaatcgtgacacgattctccttgaatcgcaaatcactgaatt 11188596  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||    
T  11188597 agggtttcctcatatcgtgccacgattatgccatcgtgacacgatttc 11188644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 11401895 - 11401653
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  11401895 gaaccgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccctgtctttggaataga 11401796  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| |||| ||||||||||| ||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11401795 cttcagcttaaataggcacagaattccgcctaaaatcatggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatctctgaattagggt 11401696  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  11401695 ttcctcagatcgtgccacgattatgccatcgtgacacgatttc 11401653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 26942916 - 26943161
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26942916 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcacttttctctctccaaatcgtaacccttgtctttggaa 26943015  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| |||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  26943016 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcatgacacgattctccttgaatcgcaaatcgctgaatta 26943115  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgattt 261  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||    
T  26943116 gggtttcctcaaatcgtgccacgattatgccatcgtgacacgattt 26943161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 15543652 - 15543406
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15543652 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 15543553  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||| | |||| ||||||||||||||  ||| ||||||||||||||| || ||||||||||||||||||||| ||| |||||    
T  15543552 tagacttcagcttaaataggcagagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcatgattctccttgaatcgcaaattactaaatta 15543453  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||| |  |||||||||||||||||||||||| |||||||||    
T  15543452 gggtttcctaaaatcgtgccacgattatgccatcgtgacacgatttc 15543406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 30655086 - 30654840
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || ||   ||    
T  30655086 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccccgttttcataa 30654987  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30654986 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaatta 30654887  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  30654886 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 30654840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 37 - 260
Target Start/End: Original strand, 3597284 - 3597507
Alignment:
Q  37 aagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggc 136  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  3597284 aagaaatcgccctcccagccgtctttaggtctcaaaatcgcactttgctctctccaaattgtaacccttgtctttggaatagacttccgcttaaataggc 3597383  T
Q  137 acataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgcca 236  Q
    |||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||    
T  3597384 acataatttcgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgatgaattagggtttcctcagatcgtgtca 3597483  T
Q  237 cgattatgccatcgtgtcacgatt 260  Q
    |||||||||||||||| |||||||    
T  3597484 cgattatgccatcgtgacacgatt 3597507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 28230237 - 28229991
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  28230237 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcacttttctctctccaaatcgtaacccttgtccttggaa 28230138  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  28230137 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgtaaatcgctgaatta 28230038  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  28230037 gggtttcctcagatcgtgacacgattatgccatcgtgacacgatttc 28229991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 19475643 - 19475399
Alignment:
Q  18 atgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaata 117  Q
    |||||||| || |||| ||||||||||||||| ||   ||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19475643 atgaactggtaaaagagtgaagaaatcgcccttctcgtcgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaata 19475544  T
Q  118 tacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagg 217  Q
     ||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||    
T  19475543 gacttcagcttaaataggcacaaaatttcgcctaaaatcgtgccacgttttaagtaaatcgtggcacgattctccttgaatcgcaaatatctaaattagg 19475444  T
Q  218 gtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||| |||  ||||| ||||||||||||||| || |||||||||    
T  19475443 gtttcatcaaatcgtgtcacgattatgccatcatgccacgatttc 19475399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 64 - 262
Target Start/End: Original strand, 11729866 - 11730063
Alignment:
Q  64 ggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttac 163  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||  ||    
T  11729866 ggtctcaaaatcgcactttgctctctccaaatcgtcacc-tggtctttggaatagacttcagcttaaataggcacagaattccgcctaaaatcgtggcac 11729964  T
Q  164 gctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    | ||||||||||||||| ||||||| ||||||  ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11729965 gatttaagtaaatcgtggcacgattttccttggttcgtaaatctctgaattagggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 11730063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 18856506 - 18856752
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  18856506 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 18856605  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||||| |||||||||| ||||||||||||| |||||||||    
T  18856606 tagtcttcagcttaaataggcacagaatttcgccaaaaatcgtgtcacgatttaagttaatcgtggcacgattctctttgaatcgcaaattactgaatta 18856705  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||   |||||||| |||||||||    
T  18856706 gggtttcctccaatcgtgtcacgattcgcccatcgtgacacgatttc 18856752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24399822 - 24399576
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| ||||| || ||| |||||||||||||||| ||| || ||||   || |||||||||||||||||||||||||||||||||||||||| ||  |||    
T  24399822 acattaactggtaaaaggttgaagaaatcgcccttctagccatcttgtagtgtcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 24399723  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||| |||| |||||||||    
T  24399722 tagtcttcagtttaaataggcacagaatttcgcctaaaatcgtgtcacgatttaagtaaatcgtggcacgattctctttgaatcgtaaattactgaatta 24399623  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||  ||||||||| |||||||||    
T  24399622 gggtttcctccaatcgtgtcacgatttggccatcgtgacacgatttc 24399576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24409942 - 24409696
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| ||||| || ||| |||||||||||||||| ||| || ||||   || |||||||||||||||||||||||||||||||||||||||| ||  |||    
T  24409942 acattaactggtaaaaggttgaagaaatcgcccttctagccatcttgtagtgtcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 24409843  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||| |||| |||||||||    
T  24409842 tagtcttcagtttaaataggcacagaatttcgcctaaaatcgtgtcacgatttaagtaaatcgtggcacgattctctttgaatcgtaaattactgaatta 24409743  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||  ||||||||| |||||||||    
T  24409742 gggtttcctccaatcgtgtcacgatttggccatcgtgacacgatttc 24409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 13942206 - 13941959
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  13942206 acatgaactagtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtcacctttgtctttggaa 13942107  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || ||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||| ||||||| ||| ||||||||||||| ||| |||     
T  13942106 tagacttcagcttaaataggcacataatttcgcccaaaatcgtgtcacgtttttagtaaatcgtgacacgattttcctttgaatcgcaaattactaaata 13942007  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  ||||| |||||||  | ||||||| |||||||||    
T  13942006 agggtttcctcaaatcgtgtcacgatttagtcatcgtgccacgatttc 13941959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 6512895 - 6512726
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  6512895 acatgaactgatagaaggttgaagaaatcgccttcctagccgtctttaggtctcaaaatctcactttgctctctccaaatcgtaacccttgtcttcagaa 6512796  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    || || ||||||||||||||| || || |||||| |||||||||| ||| ||||||||||||||| ||||    
T  6512795 tagacgtcagcttaaataggctcagaaattcgcccaaaatcgtgtcacgttttaagtaaatcgtgacacg 6512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 10289615 - 10289442
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||    
T  10289615 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcacttggctctctccaaatcgtaacccttgttttcagaa 10289516  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||| ||  ||| ||||||||||||||| |||| ||||    
T  10289515 tagtcttcagcttaaataggca-agaactgctcctaaaatcttggcacgatttaagtaaatcgtgacacgtttct 10289442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 5259579 - 5259419
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||  |||||||| |||||||  |||    
T  5259579 acatgaactgatagaaggttgaagaaatcgccctcctagtcgtctttaggtctcaaaatcgcactttgttctctccatttcgtaaccattgtcttcagaa 5259480  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaat 176  Q
    || ||||||||||||||| || || || |||||| |||||||||| ||| |||||||||||    
T  5259479 tagacttcagcttaaataagctcagaaattcgcccaaaatcgtgtcacgttttaagtaaat 5259419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 28665745 - 28665913
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||   ||    
T  28665745 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcaaaa 28665844  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||   ||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| ||||    
T  28665845 tagtattcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacg 28665913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 262
Target Start/End: Complemental strand, 4512096 - 4511869
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| || ||||   ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||    
T  4512096 tgaagaaatcgccctcctagccatcttgtagtctcaaaatcgcactttgctctcttcaaattgtaacgcttgtctttggaatagacttcagcttaaatag 4511997  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcct-tgaatcgcaaatcactgaattagggtttcctcagttcgtg 233  Q
    ||| | || |||||| ||||||||||  || ||||||| ||||||| || | || |||| |||||  ||||   || ||||||||||||||||  |||||    
T  4511996 gcatagaaattcgcccaaaatcgtgtcgcgttttaagttaatcgtgacatggtt-tcctctgaataacaaaaagctaaattagggtttcctcaaatcgtg 4511898  T
Q  234 ccacgattatgccatcgtgtcacgatttc 262  Q
     |||| || |||||||||| |||| ||||    
T  4511897 tcacgtttttgccatcgtgacacgttttc 4511869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 14282013 - 14282169
Alignment:
Q  24 tgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttc 123  Q
    ||||||||| || |||||||| |||| ||| |||||||||||||| |||||| ||||||  ||||||||| ||||||||||||||||  ||||| | |||    
T  14282013 tgatagaaggttaaagaaatcacccttctagccgtctttaggtctgaaaatcacacttttttctctccaattcgtaacccttgtcttcagaatagagttc 14282112  T
Q  124 agcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    ||||||||||||| || || |||||| |||||| ||| ||| |||||||||||||||    
T  14282113 agcttaaataggctcagaaattcgcccaaaatcatgtcacgttttaagtaaatcgtg 14282169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 11126196 - 11126346
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||| ||||| |||||||   |||||||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||  |||||||     
T  11126196 tgaagaaatcgccgtcctagccgtcttgtagtctcaaaatcgcactttgctcttctcaattcgtaacccttgtctttggaatagacttcatgttaaatat 11126295  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    |||||||| || ||| |||||||||| ||| ||||||||||| ||| ||||    
T  11126296 gcacataaatttgcccaaaatcgtgtcacgttttaagtaaatagtgacacg 11126346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 26898369 - 26898511
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    |||||||||| |||||||| |||||||   ||||||||||| |||||||||||   ||| ||| ||||||||||||||||||| ||||||||||||||||    
T  26898369 tgaagaaatcaccctcctagccgtcttgtagtctcaaaatcacactttgctcttctcaattcgcaacccttgtctttggaatagacttcagcttaaatag 26898468  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatc 177  Q
    ||||  || |||||||||||| |||| ||| ||||||||||||    
T  26898469 gcactgaaattcgcctaaaattgtgtcacgttttaagtaaatc 26898511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 20185387 - 20185219
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||||| |||| |||||| |||| |||||||| || |||||||||||||||||| ||||||||||||||||| || ||||| |||| ||| |||    
T  20185387 acatgaactgatggaaggttgaagtaatctccctcctagccatctttaggtctcaaaatctcactttgctctctccaattcttaacctttgtttttagaa 20185288  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||  ||||| |||||||||||| | || ||| |||||||||||   ||| ||||||||||||||| ||||    
T  20185287 tagtcttcaacttaaataggca-acaacttctcctaaaatcgtagcacgatttaagtaaatcgtgacacg 20185219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 22150604 - 22150772
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||||| |||| |||||| |||| |||||||| || |||||||||||||||||| ||||||||||||||||| || ||||| |||| ||| |||    
T  22150604 acatgaactgatggaaggttgaagtaatctccctcctagccatctttaggtctcaaaatctcactttgctctctccaattcttaacctttgtttttagaa 22150703  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||  ||||| |||||||||||| | || ||| |||||||||||   ||| ||||||||||||||| ||||    
T  22150704 tagtcttcaacttaaataggca-acaacttctcctaaaatcgtagcacgatttaagtaaatcgtgacacg 22150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 13004831 - 13004710
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||| | ||| ||||||||||||| || | ||    
T  13004831 acatgaactgatagaaggttgaagaaatcgccctcctagccttctttaggtctcaaaatcgtactttgctcttttcaattcgtaacccttgttttagaaa 13004732  T
Q  116 tatacttcagcttaaataggca 137  Q
        ||||||||||||||||||    
T  13004731 ctggcttcagcttaaataggca 13004710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 31880454 - 31880319
Alignment:
Q  127 ttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctca 226  Q
    ||||||||||| | || |||||| |||||||||| ||| ||||||||||||||| |||| ||  |  |||||  ||||   |||||||||||||||||||    
T  31880454 ttaaataggcataaaaattcgcccaaaatcgtgtcacgttttaagtaaatcgtgacacgttttccactgaataacaaacagctgaattagggtttcctca 31880355  T
Q  227 gttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
      ||||| |||  || |||||||||| |||| ||||    
T  31880354 aatcgtgtcacatttttgccatcgtgacacgttttc 31880319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 28112331 - 28112421
Alignment:
Q  95 tcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||||||||||||||||| ||||| ||||| ||||||||| | ||| ||  ||||  |||||||||| | | ||||||||||||||| ||||    
T  28112331 tcgtaacccttgtctttagaatagacttccgcttaaatatgaacagaaactcgcacaaaatcgtgtcaagttttaagtaaatcgtgacacg 28112421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 28108397 - 28108482
Alignment:
Q  95 tcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    ||||||||||||||||   |||| | |||| ||||||||||| ||||| |||||| ||||| |||| ||| ||||| |||||||||    
T  28108397 tcgtaacccttgtcttcaaaatagatttcatcttaaataggctcataaattcgcccaaaattgtgtcacgttttaaataaatcgtg 28108482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 31071892 - 31071825
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  31071892 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 31071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 41307008 - 41307254
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41307008 acatgaactgatagaaggttgaagaaatcgccctcctagtcatctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 41307107  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41307108 tagacttcagcttaaataggcacataattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaatta 41307207  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  41307208 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 41307254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 26753183 - 26753429
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26753183 acatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 26753282  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  26753283 tagacttcagcttaaataggcacagaatttcgcctaaaatcgtgtcacgatttaagtaaatcgtggcacgattctccttgaatcgaaaatcactgaatta 26753382  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  |||||||||||||||||| |||| |||||||||    
T  26753383 gggtttcctcagaccgtgccacgattatgccaacgtgacacgatttc 26753429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 34831404 - 34831158
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34831404 acatgaattgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatctcactttgctctctccaaatcgtaacccttgtctttggaa 34831305  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34831304 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaatta 34831205  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||    
T  34831204 gggtttcctcatatcgtgccacgattatgccatcgtgacacgatttc 34831158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 41877246 - 41877491
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||  |||    
T  41877246 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctatctccaaatcgtcaccctttttttcagaa 41877345  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||| | |||||||||||||||||||| ||  ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  41877346 tagtcttcagcttaaataggcatagaatttcgcctaaaatcgtgtcacaatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 41877445  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgattt 261  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||    
T  41877446 gggtttcgtcagatcgtgccacgattatgccatcgtgacacgattt 41877491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 12087599 - 12087353
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||||||||||| |||||||| ||  |||    
T  12087599 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtcacccttgttttcagaa 12087500  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  12087499 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgctgaatta 12087400  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||  |||  ||||| |||||||||||||||||| |||||||||    
T  12087399 gggtttagtcaaatcgtgtcacgattatgccatcgtgacacgatttc 12087353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 12058973 - 12059220
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12058973 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttgaaa 12059072  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || |||||||||||||||| |||| ||||||||| |||||||||| ||| ||| ||||||||||| ||| ||| ||| ||||||||||||| |||||||     
T  12059073 tagacttcagcttaaatagacacaaaatttcgcccaaaatcgtgtcacgtttttagtaaatcgtgacacaattttcctttgaatcgcaaattactgaata 12059172  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  ||||| |||||||  | ||||||| |||||||||    
T  12059173 agggtttcctcaaatcgtgtcacgatttagtcatcgtgccacgatttc 12059220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 34143695 - 34143941
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||| | | ||  |||    
T  34143695 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccctcttttcagaa 34143794  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||| | |||||||||||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  34143795 tagtcttcagcttaaataggcatagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 34143894  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| ||||||||  | |||||| |||||||||    
T  34143895 gggtttcctccaatcgtgtcacgattagactatcgtgacacgatttc 34143941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 40582890 - 40582644
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40582890 acatgaactggtaaaagagtgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 40582791  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| || || |||||||||||||| ||| ||||||| ||||||| |||| ||  | |||||||| |||   ||||||||    
T  40582790 tagtcttcagcttaaataggcacaaaaatttgcctaaaatcgtgtcacgttttaagtgaatcgtgacacgttttcctttgaatcgtaaacagctgaatta 40582691  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    || ||||||||  || || |||| || |||||||||| |||| ||||    
T  40582690 ggatttcctcaaatcatgtcacgtttttgccatcgtgacacgttttc 40582644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 34133464 - 34133673
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| | ||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||| | | ||  |||    
T  34133464 acatgaactggtaaaagagtaaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccctcttttcagaa 34133563  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||| | |||||||||||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  34133564 tagtcttcagcttaaataggcatagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 34133663  T
Q  216 gggtttcctc 225  Q
    ||||||||||    
T  34133664 gggtttcctc 34133673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 7270657 - 7270479
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||    
T  7270657 acatgaactgatagaaggttgaagaaatcgccctcctagctgtcgttaggtctcaaaatcgcacttagctctctccaattcgtaacccttgttttcagaa 7270558  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  ||||| |||||||||||| ||   | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  7270557 tagtcttcaacttaaataggcaaat-gctgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttcttcttg 7270479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 30065983 - 30065892
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30065983 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgt 30065892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 4100003 - 4100176
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| | ||  |||    
T  4100003 acatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcattttgctctctccaattcgtaatccttattttcagaa 4100102  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||||||| |||| ||||    
T  4100103 tagtcttcagcttaaataggca-aaaactgctcctaaaattgtggcacgatttaagtaaatcgtgacacgtttct 4100176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 26907936 - 26908078
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||| |||| ||| |||||||   ||||||||||| |||||| |||||||||||| ||||||||| | |||||||    
T  26907936 acatgaactggtaaaagagtgaagaaatcacccttctagccgtcttgtagtctcaaaatcacacttttctctctccaaattgtaacccttatttttggaa 26908035  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgt 158  Q
    || ||||||||||||||||||||| || |||||||||||||||    
T  26908036 tagacttcagcttaaataggcacagaaattcgcctaaaatcgt 26908078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 26896085 - 26896254
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || |||||| |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||   ||| ||||||||||||||||  |||    
T  26896085 acatgaattggtagaaggttgaagaaatcgccctcctagccgtttttaggtctcaaaatcgcattttgctcttgtcaattcgtaacccttgtcttcagaa 26896184  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    || |||| | ||||||||||||||||| || ||| ||||| |||| | | ||||| ||||||||| ||||    
T  26896185 tagactttaacttaaataggcacataaatttgcccaaaattgtgtcaggttttaattaaatcgtgacacg 26896254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18239981 - 18240068
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18239981 gaactgatagaaggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaaatcgtcacccttgt 18240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 2837015 - 2836924
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  2837015 acatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgtacttttctctctccaattcgtaacccttgt 2836924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 33551762 - 33551584
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||   ||||||||||| |||||||||||   ||| ||||||||||||| ||  |||    
T  33551762 acatgaactgatagaaggttgaagaaatcgccctcctagccgtcttgtagtctcaaaatcacactttgctcttctcaattcgtaacccttgttttcagaa 33551663  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||||||| |||| |||| ||||    
T  33551662 tagtcttcagcttaaataggca-acaactgctcctaaaattgtggcacgatttaagtaaatcgtgacacgtttcttcttg 33551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 26292413 - 26292313
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||| ||||||||| |||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  26292413 tgaagaaattgccctcctagccgtcttgtagtctcaaaatcgcactttgctctcttcaaatcgtaacccttgtctttggaatagactctagcttaaatag 26292314  T
Q  135 g 135  Q
    |    
T  26292313 g 26292313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 18952333 - 18952174
Alignment:
Q  17 catgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaat 116  Q
    |||||||||||| ||| ||||||||||| |||||||| || ||||   ||||||||||||||||||| |||    || |||||| |||||||||  ||||    
T  18952333 catgaactgataaaaggttgaagaaatcaccctcctagccatcttgtagtctcaaaatcgcactttgttctgctaaattcgtaatccttgtcttcagaat 18952234  T
Q  117 atacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaat 176  Q
    | ||||||||||||||||||||| || ||| || ||||| |||| ||| |||||||||||    
T  18952233 agacttcagcttaaataggcacagaaattcacccaaaattgtgtcacgttttaagtaaat 18952174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 17748081 - 17747960
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||| |||| |||||||||||||||| ||  |||    
T  17748081 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctatctcaaaatcgtaacccttgttttcagaa 17747982  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  ||||||||||||||||||    
T  17747981 tagtcttcagcttaaataggca 17747960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 18032099 - 18032008
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    |||| |||||||||||| ||||||||||| | |||||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||    
T  18032099 acatcaactgatagaaggttgaagaaatctctctcctacccgtctttaggtctcaaaatcgcactttgctcttctcaattcgtaacccttgt 18032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 23043733 - 23043658
Alignment:
Q  110 ttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||    
T  23043733 ttggaatagacttcagattaaataggcacataaattcgcctaaaatcgtgtcacgttttaagtaaatcgtgacacg 23043658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 17664151 - 17664013
Alignment:
Q  57 gtctttaggtctcaaaatcgcactttgctctctccaaa--tcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaa 154  Q
    |||| |||||||  |||||||||||| | ||||||| |  ||||||||||||| ||  |||||  |||||||||||||||||||| || ||| ||| |||    
T  17664151 gtctctaggtctacaaatcgcacttt-cactctccagaattcgtaacccttgttttcagaatagtcttcagcttaaataggcacagaaattcacct-aaa 17664054  T
Q  155 tcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    |||||  ||| ||| ||||||| ||| |||| || ||||||    
T  17664053 tcgtgccacgtttttagtaaattgtgacacgtttttccttg 17664013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 37280163 - 37280405
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37280163 gaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 37280262  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    ||||||||||||||| |||| ||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37280263 cttcagcttaaatagacacaaaatttcgcctacaatcgtgctacgatttaagtaaatcgtgacacgattctccttgaatcgcaaatcactgaattagggt 37280362  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| ||||||||||||||||||||| || |||||||||    
T  37280363 ttcctcagatcgtgccacgattatgccatcatgacacgatttc 37280405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 9185906 - 9186152
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  9185906 acatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgtctttagaa 9186005  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9186006 tagacttcagcttaaataggcacagaatttcgcctaaaatcgtgccacgatttaagtaaatcgtgccgcgattctccttgaatcgcaaatcactgaatta 9186105  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  9186106 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 9186152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 9189135 - 9189381
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9189135 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttagaa 9189234  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||||||||||||||| ||  ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  9189235 tagacttcagcttaaataggcacagaatttcgcctaaaatcatgccacgatttaagtaaatcgtgacacgattctccttgaattgcaaatcactgaatta 9189334  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  9189335 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 9189381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24234718 - 24234472
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24234718 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 24234619  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  24234618 tagacttcagcttaaataggcacagaattccgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattttccttgaatcgcaaatctctgaatta 24234519  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||    
T  24234518 gggtttcctcagatcgtgccacaattatgccatcgtgacacgatttc 24234472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24237990 - 24237744
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24237990 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcattttgctctctccaaatcgtaacccttgtctttggaa 24237891  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||| ||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24237890 tagacttcagcttaaataggcacagaattccgcctaaaatcatggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatctctgaatta 24237791  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  24237790 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 24237744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 43208372 - 43208618
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  43208372 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaaccattgtctttggaa 43208471  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||| ||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43208472 tagacttcagcttaaataggcacagaattccgcctaaaatcatgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaatta 43208571  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||    
T  43208572 gggtttcctcatatcgtgccacgattatgccatcgtgacacgatttc 43208618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 25960171 - 25960396
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25960171 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 25960270  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25960271 tagacttcagcttaaataggcacagaatttcgcctaaaatcgtgccacgatttaagtaaaccgtgacacgattctccttgaatcgcaaatcactgaatta 25960370  T
Q  216 gggtttcctcagttcgtgccacgatt 241  Q
    |||||||||||| ||||| |||||||    
T  25960371 gggtttcctcagatcgtgacacgatt 25960396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 40781095 - 40780849
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||    
T  40781095 acatgaattgatagaaggttgaagaaatcgtcctcctagccgtctttaggtctcaaaatcgcactttgctcactccaaatcgtaacccttgttagtggaa 40780996  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||| ||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40780995 tagacttcaacttaaataggcacataattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaatta 40780896  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||||||||||||||||| |||| ||| |||||    
T  40780895 gggtttcctcagatcgtgccacgattatgccaacgtgacacaatttc 40780849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 16 - 258
Target Start/End: Original strand, 31586388 - 31586627
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31586388 acatgaactgatagaaggatgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgtctttggaa 31586487  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| |||||||||||| ||  |   |||||||||||||    
T  31586488 tagacttcagcttaaataggcacaaaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctcctcgatgc---aatcactgaatta 31586584  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacga 258  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  31586585 gggtttcctcagatcgtgccacgattatgccaacgtgacacga 31586627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 8888258 - 8888033
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8888258 acataaactgatagaagattgaagaaatcgccctcctagccgtctttaggtctcaaaatcgtactttgctctctccaaatcgtaacccttgtctttggaa 8888159  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| ||||||||||||||||                     ||||||||||||||||||||||||||||||||||||||    
T  8888158 tagacttcagcttaaataggcacagaatttcgcctaaaatc---------------------gtgccacgattctccttgaatcgcaaatcactgaatta 8888080  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||    
T  8888079 gggtttccttagatcgtgtcacgattatgccatcgtgacacgatttc 8888033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 35 - 262
Target Start/End: Original strand, 40259640 - 40259867
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  40259640 tgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacctttgtctttggaatagacttcagcttaaatag 40259739  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgc 234  Q
    ||||| |||| | ||||||||||||  ||| |||||||||| |||| ||||||||||||||||||||||||  |||||||||| ||||||||  |||||     
T  40259740 gcacaaaattccacctaaaatcgtgccacgttttaagtaaaccgtggcacgattctccttgaatcgcaaatatctgaattaggatttcctcaaatcgtgt 40259839  T
Q  235 cacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||||||||| |||||||||    
T  40259840 cacgattatgccatcgtgccacgatttc 40259867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 11348382 - 11348603
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  11348382 gaaccgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccctgtctttggaataga 11348481  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| ||||||||||||||||                     ||| ||||||||||||||||||||||||| ||||||||||||    
T  11348482 cttcagcttaaataggcacaaaatttcgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcgctgaattagggt 11348560  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| ||||| |||||||||||||||||| |||||||||    
T  11348561 ttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 11348603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 1386904 - 1387130
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1386904 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttgaaa 1387003  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || ||||||||||||||||||||| ||||||||| |||||||||| ||| ||| ||||||||||| ||| ||| ||| ||||||||||||| |||||||     
T  1387004 tagacttcagcttaaataggcacagaatttcgcccaaaatcgtgtcacgtttttagtaaatcgtgacactattttcctttgaatcgcaaattactgaata 1387103  T
Q  215 agggtttcctcagttcgtgccacgatt 241  Q
    ||||||||||||  ||||| |||||||    
T  1387104 agggtttcctcaaatcgtgtcacgatt 1387130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 17876493 - 17876703
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   ||||||||||||||| ||||||||||||||||||||||||||| ||  |||    
T  17876493 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcaccttgctctctccaaatcgtaacccttgttttcagaa 17876592  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||  ||| ||  | ||||||||||||  |||||||||    
T  17876593 tagacttcagcttaaataggcacataaattcgcctaaaatcgtgtcacattttaagtaaatcgtgatacgttttcctttgaatcgcaaacaactgaatta 17876692  T
Q  216 gggtttcctca 226  Q
    |||||||||||    
T  17876693 gggtttcctca 17876703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 262
Target Start/End: Original strand, 42369201 - 42369418
Alignment:
Q  24 tgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttc 123  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||  ||||    
T  42369201 tgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgttttcagaatagtcttc 42369300  T
Q  124 agcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcc 223  Q
    |||||||||||||||| ||||||||||||||||                     ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  42369301 agcttaaataggcacagaatttcgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaattactgaattaggatttcc 42369379  T
Q  224 tcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||| |||||||||||||||||||||||| || ||||||    
T  42369380 tcagatcgtgccacgattatgccatcgtgacatgatttc 42369418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 37937751 - 37937916
Alignment:
Q  87 tctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacga 186  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||| ||||     
T  37937751 tctcaaaatcataacccttgtctttggaatagacttcagcttaaataggcacagaaattcgcctaaaatcgtgtcacgatttaagtaaatcgtgacacgt 37937850  T
Q  187 ttctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtg 252  Q
    ||  | ||||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  37937851 tttcctttgaatcgcaaataactgaattagggtttcctcaaatcgtgtcacgattttgccatcgtg 37937916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 22020691 - 22020527
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||||  |||||| ||||||||| |||||||||| |||||   ||    
T  22020691 acatgaactgatagaaggttgaagaaatcgcccttctagcagtctttaggtctcaaaatcatactttggtctctccaattcgtaaccctcgtcttcataa 22020592  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    || |||||||||||||||||| || || |||||| |||||||||| ||| |||||||||||||||    
T  22020591 tagacttcagcttaaataggctcagaaattcgcccaaaatcgtgtcacgttttaagtaaatcgtg 22020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 13972376 - 13972554
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||  |||    
T  13972376 acatgaactaatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacctttgttttcagaa 13972475  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | ||   | ||| ||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  13972476 tagtcttcagcttaaataggca-acaaaggctcctcaaatcgtggcacgatttaagtaaatcgtgacacgtttctgcttg 13972554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 5105349 - 5105177
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| ||  |||    
T  5105349 acatgaattgatagaaggttgaagaaatcgccctcctaaccgtctttagatctcgaa-tcgcactttgctctctccaaatcgtaacccttgttttcagaa 5105251  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||| ||| |||| ||||    
T  5105250 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaattgtgacacgtttct 5105177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 25955980 - 25956072
Alignment:
Q  170 agtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  25955980 agtaaatcgtgacacgattctccttgaatcgcaaatcactgaattagggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 25956072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 27266410 - 27266242
Alignment:
Q  17 catgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaat 116  Q
    |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||   ||| | ||||||||||||||   |||    
T  27266410 catgaactgatagaaggttgaagaaatcgtcctcctagccgtctttaggtctcaaaatcgcactttgctctactcaatttgtaacccttgtcttcataat 27266311  T
Q  117 atacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    | |||||| ||||||||||| || || |||||| |||||||||| ||  |||||| |||||||| ||||    
T  27266310 agacttcaacttaaataggctcagaaattcgcccaaaatcgtgtcacattttaaggaaatcgtgacacg 27266242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 12219399 - 12219265
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||| |||||||||    
T  12219399 tgaagaaatcgccctcctagccgtcttatagtctcaaaatcgcactttgctcttctcaattcgtaacccttgtctttggaatagacttcaacttaaatag 12219300  T
Q  135 gcacataatttcgcctaaaatcgtgttacgcttta 169  Q
    ||||| || ||||||||||||||||| ||| ||||    
T  12219299 gcacagaaattcgcctaaaatcgtgtcacgattta 12219265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 16791241 - 16791384
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||| |||| |||| ||  |||    
T  16791241 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgcaacctttgttttcagaa 16791340  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    ||  |||||||||||||||||||| |||||||||||||||||||    
T  16791341 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtg 16791384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 43723324 - 43723151
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||||| | ||||||||||| ||  |||    
T  43723324 acatgtactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcccacttgactctctccaatttgtaacccttgttttcagaa 43723225  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| |||||||||||| || |||| ||||    
T  43723224 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcatgacacgtttct 43723151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 6826395 - 6826274
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||   ||    
T  6826395 acatgaattgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctcctattcgtaacccttgttttcataa 6826296  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  ||||||||||||||||||    
T  6826295 tagtcttcagcttaaataggca 6826274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 30148889 - 30148800
Alignment:
Q  173 aaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  30148889 aaatcgtggcacgattctccttgaatcccaaatcactgaattagggtttcctcaaatcgtgccacgattatgccatcgtgacacgatttc 30148800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 22630465 - 22630321
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| |||  ||||||   ||||   |||| |||||||||||||||||||||||||||||||||||||||    
T  22630465 acatgaactggtaaaagactgaagaaatcgcccttctagtcgtcttgtagtctttgaatcacactttgctctctccaaatcgtaacccttgtctttggaa 22630366  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgt 160  Q
    || ||||||||||||||||| | | || |||||||||||| ||||    
T  22630365 tagacttcagcttaaataggaaaagaaattcgcctaaaattgtgt 22630321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 30926170 - 30926040
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||| ||  ||||| ||||||||||||||   |||||  |||||||||||| ||||||||||||||||||||||||| ||||| ||  |||    
T  30926170 acatgaactgataaaaagttgaaaaaatcgccctcctagtagtcttctggtctcaaaatcacactttgctctctccaaatcgtaacacttgttttcagaa 30926071  T
Q  116 tatacttcagcttaaataggcacataatttc 146  Q
    || |||||||| |||||||||||| ||||||    
T  30926070 taaacttcagcataaataggcacagaatttc 30926040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 30189959 - 30189840
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| | |||| ||||| || ||| |||| | |||||    
T  30189959 acatgaactgatagaaggttgaagaaatctccctcctagccatctttaggtctcaaaatcgcacttttcgctcttcaaattgtcacctttgtttctggaa 30189860  T
Q  116 tatacttcagcttaaatagg 135  Q
       |||| ||||||||||||    
T  30189859 ctgactttagcttaaatagg 30189840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 3874912 - 3874791
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| |||| |||||||||| ||| |||||||   |||||||||||||||||||||||||||||||| |||||||||| ||  |||    
T  3874912 acatgaactcgtaaaagagtgaataaatcgcccttctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcataacccttgttttcagaa 3874813  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  |||||| |||||||||||    
T  3874812 tagtcttcagtttaaataggca 3874791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 5666254 - 5666115
Alignment:
Q  45 gccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatt 144  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||| | |||| ||  |||||  ||||| |||||||||||| | || |    
T  5666254 gcccttctagccgtcttgaagtctcaaaatcgcactttgctctctccaaatcgtaaacattgttttcagaatagtcttcaacttaaataggca-agaact 5666156  T
Q  145 tcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
     | ||||||||||||  ||| ||||||||||||||| ||||    
T  5666155 gctcctaaaatcgtggcacgatttaagtaaatcgtgacacg 5666115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 30148958 - 30148882
Alignment:
Q  83 gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    ||||||||||||||||||||||||| ||  |||||  |||||||||||||||||||| |||||||||||||||||||    
T  30148958 gctctctccaaatcgtaacccttgttttcagaatagtcttcagcttaaataggcacagaatttcgcctaaaatcgtg 30148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 16178750 - 16178607
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||  |||||||||| |||| ||| |||||||   |||||||||||||||||||||||   ||||  ||| ||||||||||   ||    
T  16178750 acatgaactggtaaaaggatgaagaaatcacccttctagccgtcttgtagtctcaaaatcgcactttgctctgcgcaaagtgtatcccttgtcttcataa 16178651  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    || |||| || ||||||||||||| || |||| |||||| ||||    
T  16178650 taaactttagtttaaataggcacagaaattcgactaaaaccgtg 16178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 16791386 - 16791466
Alignment:
Q  182 cacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||| ||||||||||||| |||||||||||||||||||   ||||| ||||||| ||| || ||  |||||||||    
T  16791386 cacgattctctttgaatcgcaaattactgaattagggtttcctccaatcgtgtcacgattctgctatagtaacacgatttc 16791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 33310234 - 33310167
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  33310234 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 33310167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 38015086 - 38015019
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  38015086 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 38015019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 4270 - 4516
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4270 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 4369  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4370 tagacttcagcttaaataggcacataattccgcctaaaatcgtgccacgatttaagtaaatcgtgacacgattctccttgaatcgcaaatcactgaatta 4469  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
     ||||||||||| || |||||||||||||| |||||| |||||||||    
T  4470 aggtttcctcagatcctgccacgattatgctatcgtgacacgatttc 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 23225392 - 23225638
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23225392 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgtctttggaa 23225491  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23225492 tagacttcagcttaaataggcacataatttcgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgctgaatta 23225591  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| || ||||| ||||||||| |||||||||    
T  23225592 gggtttcctcagatcgtgtcatgattacgccatcgtgacacgatttc 23225638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 23234545 - 23234791
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23234545 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgtctttggaa 23234644  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23234645 tagacttcagcttaaataggcacataatttcgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgctgaatta 23234744  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| || ||||| ||||||||| |||||||||    
T  23234745 gggtttcctcagatcgtgtcatgattacgccatcgtgacacgatttc 23234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 24 - 262
Target Start/End: Complemental strand, 4861433 - 4861195
Alignment:
Q  24 tgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttc 123  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||    
T  4861433 tgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaatagtcttc 4861334  T
Q  124 agcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcc 223  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4861333 agcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcactgaattagggtttcc 4861234  T
Q  224 tcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  4861233 tcagatcgtgccacgattatgccatcgtgacacgatttc 4861195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 37166633 - 37166879
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37166633 acatgaattggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 37166732  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37166733 tagacttaagcttaaataggcacataatttcgtctaaaatcgtgtcacgttttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 37166832  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||    
T  37166833 gggtttccttagatcgtgccacgattatgccatcgtgacacgatttc 37166879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 20593906 - 20593660
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  20593906 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccatgtctttggaa 20593807  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||| ||| |||| ||| | ||||||| ||||| ||| |||||    
T  20593806 tagacttcagcttaaataggcacaaaaattcgcctaaaatcgtgtcacgatttaagtaaattgtgacacgtttccctttgaatcacaaataactaaatta 20593707  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  ||||| ||||||| |||||||||| |||| ||||    
T  20593706 gggtttcctcaaatcgtgtcacgattttgccatcgtgacacgttttc 20593660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 46 - 262
Target Start/End: Original strand, 11950930 - 11951125
Alignment:
Q  46 ccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataattt 145  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  11950930 ccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatagacttcagcttaaataggcacagaattt 11951029  T
Q  146 cgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgc 245  Q
    |||||||||||                     ||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  11951030 cgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcactgaattagggtttccttagatcgtgccacgattatgc 11951108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 26136614 - 26136859
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||| ||||| ||  |||||||   |||||||||||||||||||||||||||||||||| ||||| || ||| |||    
T  26136614 acatgaactggtaaaagagtgaagaaattgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtcaccct-gtttttagaa 26136712  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  26136713 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtgtcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 26136812  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||   |||||||| |||||||||    
T  26136813 gggtttcctccaatcgtgtcacgattcgaccatcgtgacacgatttc 26136859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 26144994 - 26145239
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||||||||||| ||||| || ||  |||    
T  26144994 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtcaccct-gttttcagaa 26145092  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  26145093 tagtcttcagcttaaataggcacagaattttgcctaaaatcgtgtcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 26145192  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||   |||||||| |||||||||    
T  26145193 gggtttcctccaatcgtgtcacgattcgaccatcgtgacacgatttc 26145239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 3068463 - 3068651
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3068463 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcactttgttctctccaagtcgtaacccttgtctttggaa 3068562  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaa 204  Q
    || ||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||| |||| ||  | ||||||||||||    
T  3068563 tagacttcagcttaaataggcacagaaattcgcttaaaatcgtgtcacgttttaagtaaatcgtgacacgttttcctttgaatcgcaaa 3068651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 9405885 - 9405742
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  9405885 acatgaactgatagaaggttgaagaaatcgcccttctagccgtctttaggtctcaaaatcgcactttgctctctccaattcataacccttgtctttggaa 9405786  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    || |||||| |||||||||||||| || ||||||||||| ||||    
T  9405785 tagacttcaacttaaataggcacagaaattcgcctaaaaccgtg 9405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 9133264 - 9133414
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  9133264 tgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttgctttcttcaaatcgtaacccttgtctttggaatagacttcagcataaatag 9133363  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    |||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||    
T  9133364 gcacataaattcgcctaaaatcgtgtcacgttttaagtaaattgtgacacg 9133414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 4695152 - 4694979
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||  |||    
T  4695152 acatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcaatttgctctctccaattcgtaacccttgttttcagaa 4695053  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| ||||    
T  4695052 tagtcttcagcttaaataggca-agaaatgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttct 4694979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 9865213 - 9865386
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||    
T  9865213 acatgaactgatagaaggttgaagaaatcgccctcctagccgtgtttaggtctcaaaatcacactttgctctctccaaatcgtaacccttgttttcagaa 9865312  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||||||| |||| ||||    
T  9865313 tagtcttcagcttaaataggca-agaactgctcctaaaattgtggcacgatttaagtaaatcgtgacacgtttct 9865386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 4596495 - 4596616
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  4596495 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatctcactttgctctctccaattcgtaactcttgtgtttggaa 4596594  T
Q  116 tatacttcagcttaaataggca 137  Q
       |||||||||||||||||||    
T  4596595 ctgacttcagcttaaataggca 4596616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 10468753 - 10468603
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| || ||||   |||||||||||||| ||| ||||   ||| ||||||||||||||||||||||| ||||||||||||||||    
T  10468753 tgaagaaatcgccctcctagccatcttgtagtctcaaaatcgcatttttctcttctcaattcgtaacccttgtctttggaatagacttcagcttaaatag 10468654  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||    
T  10468653 gcacagaaattcgcctaaaatcgtgtcacgttttaagtaaatcgtgacacg 10468603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 17730443 - 17730265
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||| |||||| | |||| ||  |||    
T  17730443 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttcggtctcaaaattgcacttggctctctccaattcgtaatcgttgttttcagaa 17730344  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  17730343 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttcttcttg 17730265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 9273606 - 9273769
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgct-ctctccaaatcgtaacccttgtctttgga 114  Q
    |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||   |    
T  9273606 acatgaaccgatagaaggttgaagaaatcgccctccgagccgtctttaggtctcaaaatcgcactttgctcctct-caaatcgtaacccttgttttcaaa 9273704  T
Q  115 atatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    |||  |||||||||||||||||| | || | | ||||||||||||  ||| |||||||||||||||    
T  9273705 atagtcttcagcttaaataggca-acaactgctcctaaaatcgtggcacgatttaagtaaatcgtg 9273769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 9080805 - 9080627
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || || |||| ||||||||||||||| ||| |||||||   ||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  9080805 acatgaattggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgtgttcagaa 9080706  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  ||||||||||||||| || | || | | ||||||||||||  ||  ||||||||||||||| |||| |||| ||||    
T  9080705 tagtcttcagcttaaatagtca-acaactactcctaaaatcgtggcactatttaagtaaatcgtgacacgtttcttcttg 9080627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 18563019 - 18563108
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccctt 105  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18563019 acatgaactgataaaaggttgaagaaatcgtcctcctaacagtcttctggtctcaaaatcgcactttgctctctccaaatcgtaaccctt 18563108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 20081204 - 20081377
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   || ||||||||||| ||| |||||||||||||||||||||||| ||  |||    
T  20081204 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtttcaaaatcgcaatttcctctctccaaatcgtaacccttgttttcagaa 20081303  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  ||||||| ||||||| || | || | | |||||||| |||  ||| ||||||||||||||| |||| ||||    
T  20081304 tagtcttcagcataaatagaca-acaactactcctaaaattgtggcacgatttaagtaaatcgtgacacgtttct 20081377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 13809999 - 13810100
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || ||| ||||||||||| |||||| | | |||||  ||||||||||| | ||||||||||||||||||||||||| |||| ||| |||    
T  13809999 acatgaactggtaaaaggttgaagaaatctccctcccagcagtcttctggtctcaaaattgaactttgctctctccaaatcgtaaccgttgtttttagaa 13810098  T
Q  116 ta 117  Q
    ||    
T  13810099 ta 13810100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 10344842 - 10344760
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgt 98  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   ||||||||||| ||||||||||| ||||||||||    
T  10344842 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcacactttgctctttccaaatcgt 10344760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 7227132 - 7227038
Alignment:
Q  39 gaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaata 133  Q
    |||||| |||||||| | ||||| |||||| |||||||||||||   |||||||||||||||| ||||| | |||||    ||||||||||||||    
T  7227132 gaaatcaccctcctatcagtcttcaggtcttaaaatcgcacttttggctctccaaatcgtaactcttgtttctggaactggcttcagcttaaata 7227038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 13842213 - 13842146
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||| | |||||||   |||||||||||||||||||    
T  13842213 aaaatcgcactttagctctc-caaaatcgtaacccttatgtttggaactgacttcagcttaaataggca 13842146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 22612094 - 22612178
Alignment:
Q  17 catgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaac 101  Q
    |||||| || || |||| |||||||||||||||  ||  ||||||   ||||||||||||||| ||||| | |||||||||||||    
T  22612094 catgaattggtaaaagagtgaagaaatcgcccttatagtcgtcttgtagtctcaaaatcgcaccttgctttatccaaatcgtaac 22612178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 25584413 - 25584175
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||     ||    
T  25584413 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcacactttgctctctccaaatcgtaacccttgtc-----aa 25584319  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25584318 tagacttcagcttaaataggcacataatttcgcctaaaatcgtgtcacgttttaagtaaatcgtgccacgattctccttgaatcgcaaatcactaaatta 25584219  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgat 259  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  25584218 gggtttcctcagatcgtgccacgattatgccatcgtgacacgat 25584175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 2873290 - 2873044
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2873290 acataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtcacccttgtctttggaa 2873191  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||| |||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  2873190 tagacttcaccttaaataggcacagaattccgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctcattgaatcgcaaatctctgaatta 2873091  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  2873090 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 2873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 30690461 - 30690215
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||| ||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30690461 acatgaactaatagaaggttgaagaaatcaccatcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgtctttggaa 30690362  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  30690361 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacaattctccttgaatcgcaaatcactgaatta 30690262  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  30690261 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 30690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 49743388 - 49743634
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49743388 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaactcttgtctttggaa 49743487  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||| |||||||||||||| |||| ||||||||||| ||  | | ||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  49743488 tagacttcaacttaaataggcacaaaattccgcctaaaatcatgccatgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcattgaatta 49743587  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  49743588 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 49743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 54723463 - 54723221
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  54723463 gaaccgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaataga 54723364  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    ||||||||||||||||| || ||||||||||||||||||   ||| || |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  54723363 cttcagcttaaataggctcagaatttcgcctaaaatcgtaccacgattcaagtaaatcgtgacacggttctccttgaatcgcaaatcactgaattagggt 54723264  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  54723263 ttcctcagatcgtgccacgattatgccatcgtgacacgatttc 54723221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 43926557 - 43926315
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43926557 gaaccgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaataga 43926458  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||| |||||||| |||    
T  43926457 cttcagcttaaataggcacaaaatttcgcctaaaatcgtgccacgatttaagtaaatcgtgacacgattctctttgaatcgcaaatctctgaattatggt 43926358  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| || |||||||||||||| |||||| |||||||||    
T  43926357 ttcctcagatcttgccacgattatgctatcgtgacacgatttc 43926315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 2778447 - 2778206
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||||||| |    
T  2778447 gaaccgatagaaggttgaagaaatcgccctcctagccgtcttttggtctcaaaatcgcactttgctctctccaaatcgtcacc-tggtctttggaataga 2778349  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||||    
T  2778348 cttcagcttaaataggcacataattccgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattttccttgaatcgtaaatctctgaatttgggt 2778249  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  2778248 ttcctccgatcgtgccacgattatgccatcgtgacacgatttc 2778206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 45896101 - 45895860
Alignment:
Q  21 aactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatac 120  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||| |||||||||| ||  |||||  |    
T  45896101 aactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaattgcacttggctctctccaaatcataacccttgttttcagaatagtc 45896002  T
Q  121 ttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtt 220  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  45896001 ttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgctgaattagggtt 45895902  T
Q  221 tcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |  |||  ||||| |||||||||||||||||| |||||||||    
T  45895901 ttgtcaaatcgtgtcacgattatgccatcgtgacacgatttc 45895860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 24125220 - 24124978
Alignment:
Q  21 aactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccct-tgtctttggaatata 119  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||| ||||  ||| ||  ||| | |    
T  24125220 aactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcacttggctctctccagatcgtcaccccctgttttcagaaaaaa 24125121  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  24125120 cttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgctgaattagggt 24125021  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||| |||| ||||| |||||||||||||||||| |||||||||    
T  24125020 ttcgtcagatcgtgtcacgattatgccatcgtgacacgatttc 24124978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 7486291 - 7486051
Alignment:
Q  21 aactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatac 120  Q
    |||||||||||| |||||||||||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||  |||||  |    
T  7486291 aactgatagaaggttgaagaaatcgccctcctagccatcttgaggtctccaaatcgcacttggctctctccaaatcgtaacccttgttttcagaatagtc 7486192  T
Q  121 ttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtt 220  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  7486191 ttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgct-aattagggtt 7486093  T
Q  221 tcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    || |||  ||||| ||||||||||||||| || |||||||||    
T  7486092 tcgtcaaatcgtgtcacgattatgccatcatgacacgatttc 7486051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 52988131 - 52987895
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||| |||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52988131 acatgaactggtaaaagagtgaagaaatctcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 52988032  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||| || |||||||||||||||||| |||||   || ||||    
T  52988031 tagacttcagcttaaataggcacataattccgcctaaaatcgtgtcaagttttaagtaaatcatggcacgattctccttgaatcacaaatatatgtatta 52987932  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtg 252  Q
    |||||||||||  ||||| ||||||||||||||||||    
T  52987931 gggtttcctcaaatcgtgtcacgattatgccatcgtg 52987895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 32367597 - 32367843
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  32367597 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 32367696  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  32367697 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctctttgaatcgcaaattactgaatta 32367796  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| ||||||| ||| |||||  |||||||||    
T  32367797 gggtttcctccaatcgtgtcacgattctgctatcgtaacacgatttc 32367843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 48064503 - 48064749
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||| ||| || |||| |||| |||||||||| ||   ||||||   |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48064503 acatgacctggtaaaagagtgaaaaaatcgcccttcttgtcgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtcacccttgtctttggaa 48064602  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| || |||||||||||||| ||||||  ||||||||    
T  48064603 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgttttaagtaaatcgtggcatgattctccttgaattgcaaatatctgaatta 48064702  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  ||||| |||||||||||||||||| |||||||||    
T  48064703 gggtttcctcaaatcgtgtcacgattatgccatcgtgccacgatttc 48064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 50462094 - 50462263
Alignment:
Q  92 aaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctc 191  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  50462094 aaatcgtaacccttgtctttggaatagacttccgcttaaataagcacagaatttcgcctaaaatcgtgccacgatttaagtaaatcgtgccacgattctc 50462193  T
Q  192 cttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgattt 261  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  50462194 cttgaatcgcaaatcactgaattagggtttcctcatatcgtgccacgattatgccatcgtgacacgattt 50462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 12561702 - 12561949
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12561702 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 12561801  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || ||||||||||||||||| ||||||||||| | |||||||||| ||| ||| ||||||||||| ||||||| ||| |||||||||||||  ||||||     
T  12561802 tagacttcagcttaaataggtacataatttcgtccaaaatcgtgtcacgtttttagtaaatcgtgacacgattttcctttgaatcgcaaattgctgaata 12561901  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  ||||| |||||||  | |||||||||||||||||    
T  12561902 agggtttcctcaaatcgtgtcacgatttagtcatcgtgtcacgatttc 12561949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 22417302 - 22417548
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  22417302 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 22417401  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  22417402 tagtcttcagcttaaataggcacagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 22417501  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||   ||||| |||||||   |||||||| |||||||||    
T  22417502 gggtttcctccaatcgtgtcacgattcgaccatcgtgacacgatttc 22417548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 262
Target Start/End: Complemental strand, 22011077 - 22010850
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||||||| ||  |||||  |||||||||||||||    
T  22011077 tgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaatagtcttcagcttaaatag 22010978  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgc 234  Q
    ||||| ||||||| |||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||   |||||     
T  22010977 gcacagaatttcgactaaaatcgtgacacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaattagggtttcctctaatcgtgt 22010878  T
Q  235 cacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||  |||||||| |||||||||    
T  22010877 cacgattagaccatcgtgacacgatttc 22010850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 11190252 - 11190018
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctc---------tctccaaatcgtaacccttg 106  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||||| ||||||||    
T  11190252 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctcactttgctctctccaaatcgcaacccttg 11190153  T
Q  107 tctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatc 206  Q
    ||||||||||| | ||||||||||||||||||| |||| |||||||||                     |||||||||||||||||||||||||||||||    
T  11190152 tctttggaatagatttcagcttaaataggcacaaaattccgcctaaaa---------------------tcgtgccacgattctccttgaatcgcaaatc 11190074  T
Q  207 actgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  11190073 actgaattagggtttcctcagatcgtgccacgattatgccatcatgacacgatttc 11190018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 12535632 - 12535785
Alignment:
Q  109 tttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcac 208  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| |    
T  12535632 tttggaatagacttcagcttaaataggcacaaaattttgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaatcgc 12535731  T
Q  209 tgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
     |||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  12535732 cgaattagggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 12535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 32287792 - 32288002
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||  |||    
T  32287792 acatgaactgatagaaggttgaagaatttgcccttctagccgtctttaggtctcaaaatcgcactttgctctctccaattcataacccttgttttcagaa 32287891  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||   |||||||||||||||||||||| ||||||||||||||||| ||  ||||| ||||||||| |||  ||  | ||||||||||||  |||||||||    
T  32287892 tagttttcagcttaaataggcacataaattcgcctaaaatcgtgtcacattttaattaaatcgtgacactttttcctttgaatcgcaaacaactgaatta 32287991  T
Q  216 gggtttcctca 226  Q
     ||||||||||    
T  32287992 aggtttcctca 32288002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 2775204 - 2775066
Alignment:
Q  20 gaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatata 119  Q
    |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||| |    
T  2775204 gaaccgatagaaggttgaagaaatcgccctcctagccgtcttttggtctcaaaatcgcactttgctctctccaaatcgtca-cctggtctttggaataga 2775106  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtg 159  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  2775105 cttcagcttaaataggcacataattccgcctaaaatcgtg 2775066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 3840242 - 3840064
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  3840242 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaa 3840143  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  | | ||||||||||||||| |||| |||| ||||    
T  3840142 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcatgatttaagtaaatcgtgacacgtttctgcttg 3840064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 41976741 - 41976570
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||   ||    
T  41976741 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctatctccaattcgtaacccttgttttaataa 41976642  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgatt 188  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||||||    
T  41976641 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtggcacgatt 41976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 24128497 - 24128276
Alignment:
Q  21 aactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaccct-tgtctttggaatata 119  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||| ||||  ||| ||  ||| | |    
T  24128497 aactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcacttggctctctccagatcgtcaccccctgttttcagaaaaga 24128398  T
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||||| ||||||||||||||||                     ||| ||||||||||||||||||||||||| ||||||||||||    
T  24128397 cttcagcttaaataggcacagaatttcgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcgctgaattagggt 24128319  T
Q  220 ttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||| |||| ||||| |||||||||||||||||| |||||||||    
T  24128318 ttcgtcagatcgtgtcacgattatgccatcgtgacacgatttc 24128276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17040490 - 17040658
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| |||||   ||| | ||||||||||||||  |||    
T  17040490 acatgaactgatagaagattgaagaaatcgctctcctagccgtctttaggtctcaaaattgcacttagctcttctcaatttgtaacccttgtcttcagaa 17040589  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    || | ||||||||||||||||||| || |||||| |||||||||| ||| ||||||||||||||| ||||    
T  17040590 tagatttcagcttaaataggcacaaaaattcgcc-aaaatcgtgtcacgttttaagtaaatcgtggcacg 17040658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 34984321 - 34984494
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||  |||    
T  34984321 acatgaactgatagaaggttgaagaagttgccctcctaaccgtctttaggtctcaaaatcgcactttgctttctccaattcgtaacccttgttttcagaa 34984420  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  |||||||||||||||||| | || | | |||||||| |||  ||| ||||||||||||||| |||| ||||    
T  34984421 tagtcttcagcttaaataggca-agaactgctcctaaaattgtggcacgatttaagtaaatcgtgtcacgtttct 34984494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 46884660 - 46884510
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||||||   ||| |||| ||||||||||||||| || ||||||||||||||||    
T  46884660 tgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttgctcttctcaattcgtcacccttgtctttggagtagacttcagcttaaatag 46884561  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||||| || ||||||||||||||||| ||| ||||||||||||||| ||||    
T  46884560 gcacaaaaattcgcctaaaatcgtgtcacgttttaagtaaatcgtgacacg 46884510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 20729115 - 20729236
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||    
T  20729115 acatgaactgatagaaggttgaaaaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcagaa 20729214  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  ||||||||||||||||||    
T  20729215 tagtcttcagcttaaataggca 20729236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 16243600 - 16243422
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||| ||||||||||||| |   |||    
T  16243600 acatgaactgatagaaggttgaagaaatcgccctcgtagccatctttaggtctcaaagtcgcactttgctctctccaattcgtaacccttgtttacagaa 16243501  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  ||||||| |||||||||| | || ||| ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  16243500 taatcttcagcataaataggca-acaacttctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttcttcttg 16243422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 29344343 - 29344516
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||    
T  29344343 acatgaactgatagaaggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcagaa 29344442  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    |    ||||||||||||||||| | || | |  |||||||||||  ||| ||||||||||||||| |||| ||||    
T  29344443 tcgttttcagcttaaataggca-agaactgcttctaaaatcgtggcacgatttaagtaaatcgtgacacgtttct 29344516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 15195789 - 15195931
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||| | |||||||   |||| ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||     
T  15195789 tgaagaaatcgccctccaagccgtcttgtagtctgaaaatcgcacttttctctcttcaaatcgtaacccttgtctttggaatagacttcagcttaaatat 15195888  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatc 177  Q
    | ||| || |||||| |||||||||| ||  ||||||||||||    
T  15195889 gaacagaaattcgcccaaaatcgtgtcacattttaagtaaatc 15195931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 11784491 - 11784347
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| |||||||   ||||||||||| |||||||||||   ||||| ||||||||||||||  |||    
T  11784491 acatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcacactttgctctgctcaaattgtaacccttgtcttcagaa 11784392  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgt 160  Q
    || |||||||||||||||||||||||| || ||||||||||||||    
T  11784391 tagacttcagcttaaataggcacataaatttgcctaaaatcgtgt 11784347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 54719697 - 54719553
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| || ||||   |||||||||||||| ||| |||||||||||| |||||| ||||  ||||||    
T  54719697 acatgaactggtaaaagagtgaagaaatcgcccttctagccatcttgtagtctcaaaatcgcatttttctctctccaaattgtaaccattgttattggaa 54719598  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgt 160  Q
    || |||||||||||||||||||||||| || ||||||||||||||    
T  54719597 tagacttcagcttaaataggcacataaatttgcctaaaatcgtgt 54719553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 10881206 - 10881038
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||| ||| |||||||||||||||||||||||||||| ||  |||    
T  10881206 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatggcattttgctctctccaaatcgtaacccttgttttcagaa 10881107  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| ||||    
T  10881106 tagtcttcagcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacg 10881038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 25443328 - 25443449
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || || |||| ||||||||||||||| ||| |||||||   |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  25443328 acatgaattggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaattgcactttgctctctccaaatcgtaacccttgtgtttggaa 25443427  T
Q  116 tatacttcagcttaaataggca 137  Q
       |||||| ||||||||||||    
T  25443428 ctgacttcaacttaaataggca 25443449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 43809305 - 43809184
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||| ||||| || || ||||   ||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  43809305 acatgaactggtaaaagagtgaagaaatcaccctcatagccatcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccttgtgtttgaaa 43809206  T
Q  116 tatacttcagcttaaataggca 137  Q
       |||||||||||||||||||    
T  43809205 ctgacttcagcttaaataggca 43809184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 31548982 - 31548862
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctt-tg-g 113  Q
    |||| |||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| || || |    
T  31548982 acattaactgataaaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcactttgctctgtccaattcgtaactcttgttttctgag 31548883  T
Q  114 aatatacttcagcttaaatag 134  Q
    ||||  |||||||||||||||    
T  31548882 aatagtcttcagcttaaatag 31548862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 17141134 - 17140995
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| ||||||||||||||| |||  ||||||   ||||||||||| ||||||| ||||||||||||||||||||||| ||   ||    
T  17141134 acatgaactagtaaaagactgaagaaatcgcccttctagtcgtcttgtagtctcaaaatcacactttgttctctccaaatcgtaacccttgttttcaaaa 17141035  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaat 155  Q
    ||  ||||||||||||||||| ||||| ||||||||||||    
T  17141034 tagtcttcagcttaaataggcccataaattcgcctaaaat 17140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 2775073 - 2774984
Alignment:
Q  173 aaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| ||||||| ||||||||||| ||||| ||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||    
T  2775073 aaatcgtggcacgattttccttgaatcgtaaatctctgaatttgggtttcctccgatcgtgccacaattatgccatcgtgacacgatttc 2774984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 27091620 - 27091498
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||| ||||||||||||| ||||   ||| ||||||||||||||||  |||    
T  27091620 acatgaactgatagaaggttgaagaaatcacc-tcatagccgtctttgggtcttaaaatcgcacttttctcttctcaattcgtaacccttgtcttcagaa 27091522  T
Q  116 tatacttcagcttaaataggcaca 139  Q
    || ||||||||||| |||| ||||    
T  27091521 tagacttcagcttagatagacaca 27091498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 28008564 - 28008679
Alignment:
Q  65 gtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacg 164  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||   |||| | |||| |||||||||||||| ||  || || |||||||||| |||    
T  28008564 gtctcaaaatcgcactttgctcttctcaattcgtaacccttgtcttcataatagatttcatcttaaataggcacagaaaatcacccaaaatcgtgtcacg 28008663  T
Q  165 ctttaagtaaatcgtg 180  Q
     |||||||||||||||    
T  28008664 ttttaagtaaatcgtg 28008679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 30220477 - 30220637
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||  || ||||||| ||| |||||| |   ||| ||||||||||||| |    ||    
T  30220477 acatgaactgatagaaggttgaagaaatcgtcctcctagccgtcttttagtgtcaaaattgcattttgcttttctcaattcgtaacccttgtttaaataa 30220576  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatc 177  Q
    ||  |||||||||||||||||  | || ||||||  ||||||||| | | ||||||||||||    
T  30220577 tagtcttcagcttaaataggcttagaaattcgcc-caaatcgtgtcatgttttaagtaaatc 30220637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 19305157 - 19305241
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 100  Q
    |||||||||| || ||| |||||||||||| ||||||| ||| |||   |||||||||||||||||||||||   ||||||||||    
T  19305157 acatgaactggtaaaaggttgaagaaatcgtcctcctagccgccttgtagtctcaaaatcgcactttgctcttctcaaatcgtaa 19305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 19301973 - 19302059
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 102  Q
    |||||||||| || ||| ||||||||||||||||| || ||  |||   |||||||||||||||||||||||   ||||||||||||    
T  19301973 acatgaactggtaaaaggttgaagaaatcgccctcatagccaccttgtagtctcaaaatcgcactttgctcttctcaaatcgtaacc 19302059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 22370034 - 22369984
Alignment:
Q  57 gtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    |||||||||||||||||||||||||| || |||  ||||||||||||||||    
T  22370034 gtctttaggtctcaaaatcgcacttttctatctaaaaatcgtaacccttgt 22369984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 35751127 - 35751058
Alignment:
Q  68 tcaaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||| ||||||| |||||| | |||||||||||||||| |||||||   |||||||||||||||||||    
T  35751127 tcaaaattgcactttagctctc-caaaatcgtaacccttgtgtttggaactgacttcagcttaaataggca 35751058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 46985768 - 46985862
Alignment:
Q  168 taagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||| |||| ||  | |||||| ||||   ||||| ||||||||||||||  ||||| ||||||| |||||||||| |||| ||||    
T  46985768 taagtaaatcgtgacacgttttcctttgaattgcaaccaactgatttagggtttcctcaaatcgtgtcacgattttgccatcgtgacacgttttc 46985862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 47051168 - 47051099
Alignment:
Q  68 tcaaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    |||||||| |||||| |||||| | |||||||||||||||| ||||||||   ||||||||||||||||||    
T  47051168 tcaaaatcacacttttgctctc-caaaatcgtaacccttgtttttggaattggcttcagcttaaataggca 47051099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 17140978 - 17140909
Alignment:
Q  193 ttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||  ||||||||||||||||||||  ||||| |||| || |||||| ||| |||| ||||    
T  17140978 ttgaatcgcaaacaactgaattagggtttcctcaaatcgtgtcacgtttttgccattgtgacacgttttc 17140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 47054604 - 47054532
Alignment:
Q  62 taggtctcaaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||| ||||||||||||||| |||||| | |||||||||||||||| | ||||||   |||||||||||||||    
T  47054604 taggtgtcaaaatcgcacttttgctctc-caaaatcgtaacccttgtttctggaattggcttcagcttaaatag 47054532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 19036 - 18790
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19036 acataaactgatagaaggttgaagaaatcgccctgctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 18937  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  18936 tagacttcagcttaaataggcacagaattccgcctaaaatcgtggcacgatttaagtaaatcgtggcacgattctccttgaatctcaaatctctgaatta 18837  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  18836 gggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 18790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 23022405 - 23022651
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23022405 acattaactgatagaaggttgaagaaatcgccctcatagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 23022504  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  23022505 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgcaaattgctgaatta 23022604  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    || ||||||||| || ||||||||||||||||||||| |||||||||    
T  23022605 ggatttcctcagatcatgccacgattatgccatcgtgacacgatttc 23022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 45941058 - 45940811
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttg-tctttgga 114  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  45941058 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaacctttatctttgga 45940959  T
Q  115 atatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatt 214  Q
    ||| |||||||||||||||| ||||||||| ||||||||||||||  ||  |||||||| |||||| ||||||||||||||||||||||||||||  |||    
T  45940958 atagacttcagcttaaatagacacataattccgcctaaaatcgtgccacaatttaagtatatcgtggcacgattctccttgaatcgcaaatcactagatt 45940859  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  45940858 agggtttcctcagatcgtgccacgattatgccatcgtgacacgatttc 45940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 70 - 262
Target Start/End: Original strand, 37184400 - 37184592
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgcttt 168  Q
    ||||||||||||| |||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||  ||| |||    
T  37184400 aaaatcgcactttagctctc-caaaatcgtaacccttgtctttgaaatagacttcagcttaaataggcacaaaatttcgcctaaaatcgtgccacgattt 37184498  T
Q  169 aagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  37184499 aagtaaatagtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagatcgtgtcacgattatgccatcgtgacacgatttc 37184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 27 - 262
Target Start/End: Complemental strand, 28110688 - 28110474
Alignment:
Q  27 tagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagc 126  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28110688 tagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatagacttcagc 28110589  T
Q  127 ttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctca 226  Q
    ||||||||||| | ||||||||||||||||                     ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  28110588 ttaaataggcatagaatttcgcctaaaatc---------------------gtgacacgattctccttgaatcacaaatcactgaattagggtttcctca 28110510  T
Q  227 gttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    | |||||||||||||||||||||||| |||||||||    
T  28110509 gatcgtgccacgattatgccatcgtgacacgatttc 28110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 20398490 - 20398270
Alignment:
Q  21 aactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatac 120  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||  |||||  |    
T  20398490 aactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcacttggctctctccaaatcgtaacccttgttttcagaatagtc 20398391  T
Q  121 ttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtt 220  Q
    ||||||||||||||||||| ||||| ||||||||||                     ||| ||||||||||||||||||||||||| |||||||||||||    
T  20398390 ttcagcttaaataggcacagaattttgcctaaaatc---------------------gtggcacgattctccttgaatcgcaaatcgctgaattagggtt 20398312  T
Q  221 tcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    || |||| ||||| |||||||||||||||||| |||||||||    
T  20398311 tcgtcagatcgtgtcacgattatgccatcgtgacacgatttc 20398270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 41058783 - 41058956
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||    
T  41058783 acatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgttttcagaa 41058882  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattct 190  Q
    ||  ||||| |||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| |||| ||||    
T  41058883 tagtcttcaacttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacgtttct 41058956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 3797307 - 3797532
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || || |||||||||||||||||||| ||  |||||||   ||||||||||||||||||||||||||||||||||||||| ||| ||  |||    
T  3797307 acatgaaatggtaaaagattgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacccctgttttcagaa 3797406  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||||| |||||| |||||||||                     ||| ||||||||||||||||||||||||| ||||||||    
T  3797407 tagtcttcagcttaaataggcacagaatttcacctaaaatc---------------------gtgacacgattctccttgaatcgcaaatcgctgaatta 3797485  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||    
T  3797486 gggtttccttagatcgtgccacgattatgccatcgtggcacgatttc 3797532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 906189 - 906337
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    |||||||| ||| |||||| |||| ||  |||||||||||||||||||||||| | ||| ||||||| |  |||||||||||| ||||||||||||||||    
T  906189 tgaagaaaacgcactcctagccgttttgtggtctcaaaatcgcactttgctcttttcaattcgtaactc--gtctttggaatagacttcagcttaaatag 906286  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||    
T  906287 gcacataaattcgcctaaaatcatgtcacgttttaagtaaatcgtgacacg 906337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 21018947 - 21019125
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| || |||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||  |||    
T  21018947 acatgaactgatagaaggttgaagaattctccctcctagccgtctttatgtttcaaaatcgcactttgctctctccaattcgtaacccttgttttcagaa 21019046  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||  ||| |||||||||||||| | || | | ||||||||| ||  ||| ||||||||||||||| |||| |||| ||||    
T  21019047 taatcttaagcttaaataggca-acaactgctcctaaaatcttggcacgatttaagtaaatcgtgacacgtttcttcttg 21019125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 49853578 - 49853737
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||  |||||  ||||| |||||||||    
T  49853578 tgaagaaatcgccctcctagccgtctttaggtctcaaaatcgtattttgctctctccaattcgtaacccttgttttcagaatagtcttcaacttaaatag 49853677  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||| | || |   |||||||| |||  ||| ||||||||||||||| |||| |||| ||||    
T  49853678 gca-acaactgatcctaaaattgtggcacgatttaagtaaatcgtgacacgtttcttcttg 49853737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 34732840 - 34732931
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||  |||||||    
T  34732840 acatgaactgatagaaggttgaagaaatcgccctactatccgtctttaggtctcaaaattgcactttgctctctccaattcgtcccccttgt 34732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 11668507 - 11668669
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||||||| |||| |||||||||| | |||| ||||| || ||  |||    
T  11668507 acatgaactgatagaaggttgaagaagtcgccctcctagccgtctctaggtctcaaaatcacactatgctctctccgattcgtcaccctcgttttcagaa 11668606  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    || |||||||  |||||||||||| ||  ||||| |||  | ||| ||| |||||||||||||||    
T  11668607 taaacttcagaataaataggcacaaaaaatcgcccaaa--catgtcacgatttaagtaaatcgtg 11668669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 34066922 - 34067004
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgt 98  Q
    ||||||||||||||||| ||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||    
T  34066922 acatgaactgatagaaggttgaataaatcgccctcctagccttctttaggtttcaaaatcgcactttgctctctccaattcgt 34067004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 2405152 - 2404984
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || ||| |||||||||||||||| ||| |||| ||   || | ||||||||| |||||||||||||||| ||||||||||| ||  |||    
T  2405152 acatgaactggtaaaaggttgaagaaatcgcccttctagccgttttgtagtgttaaaatcgcattttgctctctccaaattgtaacccttgttttcagaa 2405053  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||  ||| | |||||||||||| | || | | ||||||||||||  ||| ||||||||||||||| ||||    
T  2405052 tagtctttatcttaaataggca-agaactgctcctaaaatcgtggcacgatttaagtaaatcgtgacacg 2404984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 21107782 - 21107867
Alignment:
Q  48 ctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaata 133  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||  |||||  ||||||||||||||    
T  21107782 ctcctagccgtctttaggtctcaaaatcgcactttgatctctccaattcgtaaccattgttttcagaatagtcttcagcttaaata 21107867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 13431175 - 13431256
Alignment:
Q  64 ggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataattt 145  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||   ||||  ||||||||||||||| | ||||||||    
T  13431175 ggtctcaaaatcgcactttggtctctccaaatcgtaacccttgttttcataatagtcttcagcttaaatagactcataattt 13431256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 673539 - 673642
Alignment:
Q  57 gtctttaggtctcaaaatcgcactttgctctctccaaa--tcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaa 154  Q
    |||| |||||||  |||||||||||| ||| ||||| |  ||||||||||||||||   |||| |||||||||||||||||| || || ||||||  |||    
T  673539 gtctctaggtctataaatcgcacttt-ctcgctccagaattcgtaacccttgtcttcataatagacttcagcttaaataggctcaaaaattcgccctaaa 673637  T
Q  155 tcgtg 159  Q
    |||||    
T  673638 tcgtg 673642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 21858854 - 21858822
Alignment:
Q  229 tcgtgccacgattatgccatcgtgtcacgattt 261  Q
    ||||||||||||| |||||||||||||||||||    
T  21858854 tcgtgccacgattttgccatcgtgtcacgattt 21858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 31204425 - 31204358
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  31204425 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 31204358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 45961281 - 45961348
Alignment:
Q  70 aaaatcgcacttt-gctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||||||||| |||||| | |||||||||||||||| ||  |||||  ||||||||||||||||||    
T  45961281 aaaatcgcactttagctctc-caaaatcgtaacccttgttttcagaatagtcttcagcttaaataggca 45961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 30735 - 30489
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  30735 acatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcacttttctctctccaaatcgtaacccttgtccttggaa 30636  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  30635 tagacttcagcttaaataggcacagaattccgcctaaaatcgtgccacgatttaagtaaatcgtggcacgattctccttgaatcgtaaatcgctgaatta 30536  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  30535 gggtttcctcagatcgtgacacgattatgccatcgtgacacgatttc 30489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 16953411 - 16953189
Alignment:
Q  19 tgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatat 118  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  16953411 tgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctccccaaatcgtaacccttgtctttggaatag 16953312  T
Q  119 acttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattaggg 218  Q
    ||||||||||||||||||||||||||||||||||||||                     ||| |||||||||||||||||||||||||||||||||||||    
T  16953311 acttcagcttaaataggcacataatttcgcctaaaatc---------------------gtgacacgattctccttgaatcgcaaatcactgaattaggg 16953233  T
Q  219 tttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  16953232 tttcctcagatcgtgccacgattatgccatcgtgacacgatttc 16953189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 31284308 - 31284062
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||| || || |||| ||||||||||||||| || ||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31284308 acatgaattggtaaaagagtgaagaaatcgcccttcttaccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 31284209  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| |||| ||||||||||  ||  ||| ||||||||||||||| |||||||||| |||||||||||||  || |||||    
T  31284208 tagacttcagcttaaataggcacaaaattccgcctaaaattatgccacgttttaagtaaatcgtggcacgattctctttgaatcgcaaatatctaaatta 31284109  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  || || |||||||||||||||||| |||||||||    
T  31284108 gggtttcctcaaatcatgtcacgattatgccatcgtgccacgatttc 31284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 10498695 - 10498942
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| || ||||||||   || ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  10498695 acatgaactggtaaaagagtgaagaaatcgcccttctcaccgtcttgtagtatcaaaatcgcactttgctctctcaaaatcataacccttgtctttggaa 10498794  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || |||||||||||||||| |||| ||||||| | |||||||||| ||| ||| ||||||||||| ||||||| ||| ||||||||||||| |||||||     
T  10498795 tagacttcagcttaaatagacacagaatttcgtccaaaatcgtgtcacgtttttagtaaatcgtgacacgattttcctttgaatcgcaaattactgaata 10498894  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    | ||||||||||  ||||| |||| ||  | ||||||| |||||||||    
T  10498895 aaggtttcctcaaatcgtgtcacgttttagtcatcgtgccacgatttc 10498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 8911285 - 8911062
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||| ||| |||   ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8911285 acatgaactggtaaaagagtgaagaaatcgcccttctagccgacttatagtctcaaaatcgcactttgctctctccaa-tcgtaacccttgtctttggaa 8911187  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| || ||||||||||||| ||| ||  ||||||||||||||| |||| ||  | ||| ||||||||  |||||||||    
T  8911186 tagacttcagcttaaataggcacagaaattcgcctaaaatcttgtcacattttaagtaaatcgtgacacgttttcctttggatcgcaaacaactgaatta 8911087  T
Q  216 gggtttcctcagttcgtgccacgat 240  Q
    |||||||||||  ||||| ||||||    
T  8911086 gggtttcctcaaatcgtgtcacgat 8911062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 23620788 - 23621034
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| ||||||||||||||| ||  |||||||   || ||||||||||| ||| |||||||||||||||||||||| | ||  |||    
T  23620788 acatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtttcaaaatcgcatttttctctctccaaatcgtaaccctttttttcagaa 23620887  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    ||  |||||||||||||||||| | ||||||| |||||||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||    
T  23620888 tagtcttcagcttaaataggcatagaatttcgtctaaaatcgtgtcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaatta 23620987  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||| |||   ||||| |||||||   |||||||| |||||||||    
T  23620988 gggttttctccaatcgtgtcacgattcgcccatcgtgacacgatttc 23621034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 33419271 - 33419121
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||| ||||||| |||||||   |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  33419271 tgaagaaatcgtcctcctagccgtcttgtagtctcaaaatcgaactttgctctcttcaaatagtaacccttgtctttggaatatactttagcttaaatag 33419172  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    ||||| || |||||| |||||||||| ||| ||||||||||||||| ||||    
T  33419171 gcacaaaaattcgcccaaaatcgtgtcacgttttaagtaaatcgtgtcacg 33419121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 257
Target Start/End: Complemental strand, 2560227 - 2559986
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| ||||||||||||||| ||| | || ||   |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  2560227 acatgaactcgtaaaagagtgaagaaatcgcccttctagctgtgttgtagtctcaaaatcgcactttgctctgctcaaatcgtaacccttgtctttggaa 2560128  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || |||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||||||||| |||  ||  | ||||||  ||||   ||| ||||    
T  2560127 tagacttcagcttaaataggcgcataaatttgcctaaaatcgtgtcacgttttaagtaaatcgtgacaccttttcctttgaataacaaacagctgtatta 2560028  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacg 257  Q
    ||||||||| |  ||||| |||| || |||||||||| ||||    
T  2560027 gggtttccttaaatcgtgtcacgtttttgccatcgtgacacg 2559986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 38248881 - 38249021
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || ||| |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||   ||    
T  38248881 acatgaactagtacaaggttgaagaaatcgcccttctagccgtctttaggtctcaaaatcgcacttttctctctccaattcgtaacccttgtcttcaaaa 38248980  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatc 156  Q
    || |||||||||||||||||| || ||||||||||||||||    
T  38248981 tagacttcagcttaaataggctcagaatttcgcctaaaatc 38249021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 13196486 - 13196276
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctct-ctccaaatcgtaacccttgtctttgga 114  Q
    |||||||||  || ||| |||||||||||||||||||||| |||||   |||||||||||||||||| |||| |||||| |||||||| ||||||| |||    
T  13196486 acatgaacttgtaaaaggttgaagaaatcgccctcctaactgtcttgtagtctcaaaatcgcacttttctcttctccaa-tcgtaaccattgtcttagga 13196388  T
Q  115 atatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatt 214  Q
    ||| ||||||||||||||||||||| || |||||| ||||| |||| ||| ||||||||||||||| |||| ||  | ||||||  ||||    ||||||    
T  13196387 atagacttcagcttaaataggcacagaaattcgcccaaaattgtgtcacgttttaagtaaatcgtgacacgttttcctttgaataacaaacagttgaatt 13196288  T
Q  215 agggtttcctca 226  Q
    ||||||||||||    
T  13196287 agggtttcctca 13196276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 21280268 - 21280485
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    |||||||||| |||||||| |||||||   |||||||| || ||||||||| |   ||| |||||||||||| |||||||||| ||||||||||||||||    
T  21280268 tgaagaaatcaccctcctagccgtcttgtagtctcaaagtctcactttgctattctcaagtcgtaacccttgcctttggaatagacttcagcttaaatag 21280367  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggtttcctcagttcgtgc 234  Q
    || || || |||||| |||||||||| | | ||||||||||||||| |||| ||  | ||||||  ||||   |||||||||||||||  ||  |||||     
T  21280368 gcgcaaaaattcgcccaaaatcgtgtcatgttttaagtaaatcgtgacacgttttcctttgaataacaaacagctgaattagggtttcaccaaatcgtgt 21280467  T
Q  235 cacgattatgccatcgtg 252  Q
    |||| || ||||||||||    
T  21280468 cacgtttttgccatcgtg 21280485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 5980802 - 5980957
Alignment:
Q  24 tgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttc 123  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||||| |||||||||||   ||| ||||||||||||| ||  |||||  |||     
T  5980802 tgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaatcacactttgctcttctcaattcgtaacccttgttttcagaatagtctta 5980901  T
Q  124 agcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    |||||||||||||| | || | | ||||||||||||  ||| |||||||||||||||    
T  5980902 agcttaaataggca-acaactgctcctaaaatcgtgccacgatttaagtaaatcgtg 5980957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 12582627 - 12582468
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    |||||||||| |||||||| |||||||    ||||||||||||| ||||||||   ||| ||||||||||||| ||   ||||  |||||||||||||||    
T  12582627 tgaagaaatctccctcctagccgtcttgtaatctcaaaatcgcattttgctcttctcaattcgtaacccttgttttcataatagtcttcagcttaaatag 12582528  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttg 195  Q
    ||| | || | | ||||||||||||  ||| ||||||||||||||| |||| |||| ||||    
T  12582527 gca-acaactgcacctaaaatcgtggcacgatttaagtaaatcgtggcacgtttcttcttg 12582468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 68006 - 68252
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||||||||| || |||||||   |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  68006 acatgaactggtaaaagagtgaagaaatcgccctcttagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaacctttgtctttggaa 68105  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaatta 215  Q
    || ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||| |||| ||  | ||||||||||||   || |||||    
T  68106 tacacttcagcttaaataggcacagaaattcgcctaaaatcgtgtcacgttttaagtaaatcgtgacacgttttgctttgaatcgcaaacagctaaatta 68205  T
Q  216 gggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    |||||||||||  ||||| || | || |||||||||| |||| ||||    
T  68206 gggtttcctcaaatcgtgtcatgtttttgccatcgtgacacgttttc 68252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 29006 - 28759
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||  || |||| ||||||||||||||| ||  |||||||   || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29006 acatgaactcttaaaagagtgaagaaatcgcccttcttgccgtcttgtagtttcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 28907  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaatt 214  Q
    || |||| |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||| ||| ||||||| ||| || ||||||||||  ||||||     
T  28906 tagactttagcttaaataggcacagaatttcgcccaaaatcgtgtcacgttttaagtaaattgtgacacgattttcctttaaatcgcaaattgctgaata 28807  T
Q  215 agggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
    | ||||||||||  ||||| |||||||  | ||||||| |||||||||    
T  28806 acggtttcctcaaatcgtgtcacgatttagtcatcgtgccacgatttc 28759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 18936 - 18792
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    |||||||||| || |||| |||||||||| |||| ||  |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18936 acatgaactggtaaaagagtgaagaaatctcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaa 18837  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgt 160  Q
    || |||||| |||||||||||||| ||||||||| ||||||||||    
T  18836 tagacttcaacttaaataggcacaaaatttcgcccaaaatcgtgt 18792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 262
Target Start/End: Complemental strand, 24414 - 24216
Alignment:
Q  65 gtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacg 164  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||| | |    
T  24414 gtctcaaaatcgcactttgctctctcaaaatcgtaacccttgtctttggaatagacttcagcttaaataggcacagaatttcgcccaaaattgtgtcagg 24315  T
Q  165 ctttaagtaaatcgtgccacgattctcc-ttgaatcgcaaatcactgaattagggtttcctcagttcgtgccacgattatgccatcgtgtcacgatttc 262  Q
     ||| ||||||||||| ||| ||| ||| ||||||||||||| ||||||| ||||||||||||  ||||| |||||||  | ||||||| |||||||||    
T  24314 tttttagtaaatcgtgacacaattttcctttgaatcgcaaattactgaataagggtttcctcaaatcgtgtcacgatttagtcatcgtgccacgatttc 24216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 28577 - 28472
Alignment:
Q  120 cttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacgattctccttgaatcgcaaatcactgaattagggt 219  Q
    |||||||||||||||||| | |||||||||||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  28577 cttcagcttaaataggcatagaatttcgcctaaaatcgtggcacgatttaagtaaatcgtggcacgatcctctttgaatcgcaaattactgaattagggt 28478  T
Q  220 ttcctc 225  Q
    ||||||    
T  28477 ttcctc 28472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 1368 - 1218
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||| ||||   ||  ||||||||||||||||||||||| |||||| |||||||||    
T  1368 tgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttcctcttctcatttcgtaacccttgtctttggaatagacttcatcttaaatag 1269  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtgccacg 185  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||    
T  1268 gcacataaattcgcctaaaatcgtgtcacgttttaagtaaatcgtgacacg 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 59183 - 59328
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    ||||||||||||||||||| |||||||   |||||||||||||| ||| ||||   ||| || |||||||||||||||||||| ||||||||||||||||    
T  59183 tgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcaattttctcttctcaattcataacccttgtctttggaataaacttcagcttaaatag 59282  T
Q  135 gcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  59283 gcacataaattcgcctaaaatcgtgtcacattttaagtaaatcgtg 59328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 4993 - 4830
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||| ||||||| |||||||| || |||||||| || |||||||||||||||||||||||||||||||||||| || |||||||||| ||  |||    
T  4993 acatgaactcatagaaggttgaagaattctccctcctagccatctttaggtctcaaaatcgcactttgctctctccaattcataacccttgttttcagaa 4894  T
Q  116 tatacttcagcttaaataggcacataatttcgcctaaaatcgtgttacgctttaagtaaatcgtg 180  Q
    ||  |||||||||||||||||| | || | | ||||||||||||  ||| |||||||||||||||    
T  4893 tagtcttcagcttaaataggca-acaactgctcctaaaatcgtggcacgatttaagtaaatcgtg 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 84881 - 84790
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 107  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  84881 acatgaactgatagaaggttgaagaaatcgcccttctagccgtctttagatctcaaaatcgcactttgctctctccaaatcgtcacccttgt 84790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 4461 - 4582
Alignment:
Q  16 acatgaactgatagaagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaa 115  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||| |    ||    
T  4461 acatgaactgatagaaggttgaagaaattgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaatttgtaaccgttgtttgcataa 4560  T
Q  116 tatacttcagcttaaataggca 137  Q
    ||  ||||||||||||||||||    
T  4561 tagtcttcagcttaaataggca 4582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 2573 - 2696
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaatag 134  Q
    |||||||||| |||||||| |||||||   |||||||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||||||||||||    
T  2573 tgaagaaatctccctcctagccgtcttgtagtctcaaaatcgcactttgctcttgtcaaatcgtaacccttatctttggaatagacttcagcttaaatag 2672  T
Q  135 gcacataatttcgcctaaaatcgt 158  Q
    ||||| || |  ||||||||||||    
T  2673 gcacaaaaatgtgcctaaaatcgt 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 3506 - 3636
Alignment:
Q  30 aagattgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagctta 129  Q
    |||| |||||||||| |||| ||| |||||||   ||||||||||||||||||  ||||||||||||||||||| | | ||||||||| |||||||||||    
T  3506 aagagtgaagaaatcacccttctagccgtcttatagtctcaaaatcgcacttttttctctccaaatcgtaacccctatttttggaatagacttcagctta 3605  T
Q  130 aataggcacataatttcgcctaaaatcgtgt 160  Q
    || ||||||| || |||||||||||||||||    
T  3606 aacaggcacagaaattcgcctaaaatcgtgt 3636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 34817 - 34954
Alignment:
Q  38 agaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgtctttggaatatacttcagcttaaataggca 137  Q
    ||||||| ||||| || | |||||| |||||||||| | |||||||||||||| ||||||||| |||||| ||| |||||  ||||||  ||||||||||    
T  34817 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaatcgtaatccttgtttttagaataagcttcagtataaataggca 34916  T
Q  138 cataatttcgcctaaaatcgtgttacgctttaagtaaatc 177  Q
    || || ||||||   |||||||| ||| ||||||||||||    
T  34917 caaaaattcgcc--gaatcgtgtcacgatttaagtaaatc 34954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 917 - 820
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctct-ctccaaatcgtaacccttgtctttggaatatacttcagcttaaat 132  Q
    ||||||||||||| | ||| | |||||   ||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||||||||    
T  917 tgaagaaatcgcctttctagcagtcttgtagtctcaaaatcgcactttgctcttctccat-tcgtaacccttatctttggaatagacttcagcttaaat 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 63527 - 63430
Alignment:
Q  35 tgaagaaatcgccctcctaaccgtctttaggtctcaaaatcgcactttgctct-ctccaaatcgtaacccttgtctttggaatatacttcagcttaaat 132  Q
    ||||||||||||| | ||| | |||||   ||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||||||||    
T  63527 tgaagaaatcgcctttctagcagtcttgtagtctcaaaatcgcactttgctcttctccat-tcgtaacccttatctttggaatagacttcagcttaaat 63430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University