View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_low_144 (Length: 252)
Name: NF3772_low_144
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_low_144 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 27723554 - 27723313
Alignment:
| Q |
1 |
taaaaagaatgaaaaaagttgggcctcttacaggtagtcctactaaattagccaagatagctatctggttaactccaaccttaaagcttacaggtttctg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
27723554 |
taaaaagaatgaaaaaagttgggcctcttacaggtagtcctactaaattagccaagatagctatctggttaactccaaccttaaagtttacaggtttctg |
27723455 |
T |
|
| Q |
101 |
gaattcaaaacctttctcttcatggctaccatgtttggatccttaaaaccatgaagaaaattattataattacttgattagtaagacatcaatttaagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
27723454 |
gaattcaaaacctttctcttcatggctaccatgtttggatccttaaaaccatgaagaaaattattataattacttgattattaagacatcaatttaagta |
27723355 |
T |
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| Q |
201 |
cattggattgagcattttccttttacaaatcaaatttctgtg |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
27723354 |
cattggattgagcattttccttttacaaatcaaatttctgtg |
27723313 |
T |
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