View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_low_147 (Length: 251)
Name: NF3772_low_147
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_low_147 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 47105750 - 47105525
Alignment:
| Q |
16 |
aacctcacttttcactacgtaggattgcaagaacccgacaaacctctcattcaatcatggctatcctccaacactaaaaccaaaactcttcttccaccac |
115 |
Q |
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| T |
47105750 |
aacctcacttttcactacgtaggattgcaagaacccgacaaacctctcattcaatcatggctatcctccaacactaaaaccaaaactcttcttccaccac |
47105651 |
T |
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| Q |
116 |
cttgtctagcctttgtcatagtaaggttccaaaaactatccctcgaaatcatcgtagacttttcaactcgttccataatctcaacaaaactctacaaagg |
215 |
Q |
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| T |
47105650 |
ctcgtcaagcctttgtcatagtaaggttccaaaaacaatccctcgaaatcatcgtagacttttcaactcgttccataatctcaacaaaactctacaaagg |
47105551 |
T |
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| Q |
216 |
acaaggctaccctatccttacctttg |
241 |
Q |
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|||||||||||||||||||||||||| |
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| T |
47105550 |
acaaggctaccctatccttacctttg |
47105525 |
T |
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