View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_low_155 (Length: 248)
Name: NF3772_low_155
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_low_155 |
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Alignment Details
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 15377906 - 15378103
Alignment:
| Q |
8 |
attattctgttataaatgtttttggttgaattaatgtacgaacattacagctgcctaataaagtttactagtagttgtagttcgtttatgataatgaatc |
107 |
Q |
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| T |
15377906 |
attattctgttataaatgtttttggttgaattaatgtacgaacattacagctgcctaataaagtttacttgtagtagtagttcgtttatgataatgaatc |
15378005 |
T |
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| Q |
108 |
cgcaaggggtaatgtatcatttctcgaccatgtatgtatctcatgagaaaagttactttagactctatttttatagggttattaatttaataatagtg |
205 |
Q |
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| T |
15378006 |
cgcaaggggtaatgtatcatttctcgaacatgtatgtatctcatgagaaaagttactttagacactatttttatagggttattaatttattaatagtg |
15378103 |
T |
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