View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_low_58 (Length: 384)

Name: NF3772_low_58
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_low_58
NF3772_low_58
[»] chr7 (1 HSPs)
chr7 (11-367)||(35050197-35050556)
[»] chr4 (2 HSPs)
chr4 (14-259)||(20006852-20007109)
chr4 (74-316)||(54076826-54077071)
[»] chr1 (6 HSPs)
chr1 (14-259)||(14123257-14123514)
chr1 (74-316)||(41699879-41700124)
chr1 (74-316)||(41705473-41705718)
chr1 (101-226)||(40250123-40250251)
chr1 (74-217)||(24344272-24344418)
chr1 (74-217)||(24356650-24356796)
[»] chr5 (1 HSPs)
chr5 (86-316)||(23558162-23558395)
[»] chr6 (3 HSPs)
chr6 (14-257)||(8533075-8533330)
chr6 (74-226)||(20787753-20787908)
chr6 (74-217)||(24185486-24185632)
[»] chr2 (2 HSPs)
chr2 (74-226)||(15048304-15048459)
chr2 (74-226)||(38177578-38177733)
[»] chr3 (4 HSPs)
chr3 (19-74)||(26304846-26304901)
chr3 (74-140)||(49961457-49961523)
chr3 (74-217)||(409001-409147)
chr3 (74-217)||(414795-414941)


Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 11 - 367
Target Start/End: Complemental strand, 35050556 - 35050197
Alignment:
Q  11 cacagaaacaacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttccatcaaacccacatttaataagtgtgtgtctccgctta 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35050556 cacagaaacaacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttccatcaaacccacatttaataagtgtgtgtctccgctta 35050457  T
Q  111 atatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagttgaagaacacaaaggatatgtctgcataaaatgcctt 207  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35050456 atatccttcctccaccttgacaaaatataacaagacggtactgactcagttttacctgtgagctgaagaacacaaaggatatgtctgcataaaatgcctt 35050357  T
Q  208 taaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctgaaccttgtgtctttaaatctatcatatacctttttact 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35050356 taaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctgaaccttgtgtctttaaatctatcatatacctttttact 35050257  T
Q  308 ttctataacgcaaaatgttgaattcaaattctccattccctctaagaaagcattacagta 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35050256 ttctataacgcaaaatgttgaattcaaattctccattccctctaagaaagcattacagta 35050197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 20006852 - 20007109
Alignment:
Q  14 agaaacaacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttcc---------atcaaacccacatttaataagtgtgtgtctc 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  20006852 agaaacaacttcgtaaaaggcatcacatgctttaccaactagttgcaattcaacatttccggctaaatgatcaaacccacatttaataagtgtgtgtctc 20006951  T
Q  105 cgcttaatatccttcctccaccttgacaaaatataacaaggt---actgactcagttttacctgtgagttgaagaacacaaaggatatgtctgcataaaa 201  Q
    | ||||||||| ||||||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20006952 cacttaatatcattcctccaccttgacaaaatataacaagacgacactgactcagttttacctgtgagctgaagaacacaaaggatgtgtctgcataaaa 20007051  T
Q  202 tgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20007052 tgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaa 20007109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 316
Target Start/End: Original strand, 54076826 - 54077071
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagt 170  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||||||||| || | ||| ||||||||||   | |||||||| |||||| |||||||     
T  54076826 atcaaaaccacttttaataagtgtgtatcttcgcttaatatccttcctccatctcggcaatatataacaagagggcactgactctgttttagctgtgagc 54076925  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctga 270  Q
    | ||||||||||||||||||||| |||||||| || ||||||||||||||  |||| | |||| ||||||| ||||||||||||||||||| |||| |||    
T  54076926 ttaagaacacaaaggatatgtctacataaaatacccttaaactcaaataaaaagcatgtacatcgtatttcaaagtctttctcattgaagaataccttga 54077025  T
Q  271 accttgtgtctttaaatctatcatatacctttttactttctataac 316  Q
    || || ||||||||| |  |||| ||||||||||||||||| ||||    
T  54077026 acattatgtctttaacttcatcaaatacctttttactttctgtaac 54077071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 2e-99; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 14123514 - 14123257
Alignment:
Q  14 agaaacaacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttcc---------atcaaacccacatttaataagtgtgtgtctc 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  14123514 agaaacaacttcgtaaaaggcatcacatgctttaccaactagttgcaattcaacatttccggctaaatgatcaaacccacatttaataagtgtgtgtctc 14123415  T
Q  105 cgcttaatatccttcctccaccttgacaaaatataacaaggt---actgactcagttttacctgtgagttgaagaacacaaaggatatgtctgcataaaa 201  Q
    | ||||||||| ||||||||||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  14123414 cacttaatatcattcctccaccttgacaaaatataacaagacgacactgactcagttttacctgtgagctgaagaacacaaaggatgtgtctgcataaaa 14123315  T
Q  202 tgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14123314 tgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaa 14123257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 316
Target Start/End: Complemental strand, 41700124 - 41699879
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagt 170  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||||||||| || | ||| ||||||||||   | |||||||| |||||| |||||||     
T  41700124 atcaaaaccacttttaataagtgtgtatcttcgcttaatatccttcctccatctcggcaatatataacaagagggcactgactctgttttagctgtgagc 41700025  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctga 270  Q
    | ||||||||||||||||||||| |||||||| || |||||||||||||| ||||| | |||| ||||||| ||||||||||||||||||| |||| |||    
T  41700024 ttaagaacacaaaggatatgtctacataaaatacccttaaactcaaataaacagcatgtacatcgtatttcaaagtctttctcattgaagaataccttga 41699925  T
Q  271 accttgtgtctttaaatctatcatatacctttttactttctataac 316  Q
    || || ||||||||| |  |||| ||||||||||||||||| ||||    
T  41699924 acattatgtctttaacttcatcaaatacctttttactttctgtaac 41699879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 316
Target Start/End: Complemental strand, 41705718 - 41705473
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagt 170  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||||||||| || | ||| ||||||||||   | |||||||| |||||| |||||||     
T  41705718 atcaaaaccacttttaataagtgtgtatcttcgcttaatatccttcctccatctcggcaatatataacaagagggcactgactctgttttagctgtgagc 41705619  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctga 270  Q
    | ||||||||||||||||||||| |||||||| || |||||||||||||| ||||| | |||| ||||||| ||||||||||||||||||| |||| |||    
T  41705618 ttaagaacacaaaggatatgtctacataaaatacccttaaactcaaataaacagcatgtacatcgtatttcaaagtctttctcattgaagaataccttga 41705519  T
Q  271 accttgtgtctttaaatctatcatatacctttttactttctataac 316  Q
    || || ||||||||| |  |||| ||||||||||||||||| ||||    
T  41705518 acattatgtctttaacttcatcaaatacctttttactttctgtaac 41705473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 40250251 - 40250123
Alignment:
Q  101 tctccgcttaatatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagttgaagaacacaaaggatatgtctgcat 197  Q
    ||||||||| | || ||||||||||| || |||||||||| |||   | | ||| || ||||| ||  |||| | ||| |||||||| || |||||||||    
T  40250251 tctccgctttacatacttcctccaccgtggcaaaatataaaaagagggcattgaatctgttttgccaatgagcttaagcacacaaagaatgtgtctgcat 40250152  T
Q  198 aaaatgcctttaaactcaaataagcagca 226  Q
    ||||| |||||||||||||||||||||||    
T  40250151 aaaattcctttaaactcaaataagcagca 40250123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 24344418 - 24344272
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||||| |  |||||||| ||||| |||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  24344418 atcaaaaccacatttaataagtgtatacctccgctttatatctttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 24344319  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaa 217  Q
    | ||| ||||||||||| || || ||||||||||||||||| |||||    
T  24344318 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaa 24344272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 24356796 - 24356650
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||| | |  |||||||| ||||| |||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  24356796 atcaaaaccacatttaataagtatatacctccgctttatatctttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 24356697  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaa 217  Q
    | ||| ||||||||||| || || ||||||||||||||||| |||||    
T  24356696 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaa 24356650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 86 - 316
Target Start/End: Complemental strand, 23558395 - 23558162
Alignment:
Q  86 tttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataacaag---gtactgactcagttttacctgtgagttgaagaacacaa 182  Q
    |||||||||||| | ||| |||||||||||||||||||| || | ||| ||||||||||   | |||||||| |||||| ||||||| | ||||||||||    
T  23558395 tttaataagtgtatatcttcgcttaatatccttcctccatctcggcaatatataacaagagggcactgactctgttttagctgtgagcttaagaacacaa 23558296  T
Q  183 aggatatgtctgcataaaatgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattgaagattaccctgaaccttgtgtctt 282  Q
    ||||||||||| |||||||| || |||||||||||||| ||||| | |||| ||||||| ||||||||||||||||||| |||| ||||| || ||||||    
T  23558295 aggatatgtctacataaaatacccttaaactcaaataaacagcatgtacatcgtatttcaaagtctttctcattgaagaataccttgaacattatgtctt 23558196  T
Q  283 taaatctatcatatacctttttactttctataac 316  Q
    ||| |  |||| ||||||||||||||||| ||||    
T  23558195 taacttcatcaaatacctttttactttctgtaac 23558162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 8533075 - 8533330
Alignment:
Q  14 agaaacaacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttcca---------tcaaacccacatttaataagtgtgtgtctc 104  Q
    |||| ||||||| ||||||||||||||||| ||||||||  | || || ||||||||||||         ||||  ||||||||||||| ||| ||||      
T  8533075 agaagcaacttcataaaaggcatcacatgctttaccaacacgctgtaactcaacatttccagtcaagttatcaataccacatttaataactgtatgtcgt 8533174  T
Q  105 cgcttaatatccttcctccaccttgacaaaatataacaaggt---actgactcagttttacctgtgagttgaagaacacaaaggatatgtctgcataaaa 201  Q
    ||||| |||||||||||||||   || |||||||||  || |   ||| | || |||||||| | ||||| ||| ||||| || || ||||| || ||||    
T  8533175 cgctttatatccttcctccactgagaaaaaatataatgagatggcactaaatctgttttaccagagagtttaagcacacatagtatgtgtctacacaaaa 8533274  T
Q  202 tgcctttaaactcaaataagcagcaagcacattgtatttcgaagtctttctcattg 257  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  8533275 tgcctttaaactcaaataagcagcaagtacattgtatctcaaagtctttttcattg 8533330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 20787753 - 20787908
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| || |||||||||||||| |  |||||||| |||||||||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  20787753 atcaaaaccgcatttaataagtgtatacctccgctttatatccttcctccaccgtgccaaaatataattagatggcacaaaatctgttttccctatgagc 20787852  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagca 226  Q
    | ||| || |||||||| || || ||||||||||||||||| ||||| ||||||||    
T  20787853 ttaagcacgcaaaggatgtgcctacataaaatgcctttaaattcaaacaagcagca 20787908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 24185486 - 24185632
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||||| |  |||||||| ||||| |||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  24185486 atcaaaaccacatttaataagtgtatacctccgctttatatctttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 24185585  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaa 217  Q
    | ||| ||||||||||| || || ||||||||||||||||| |||||    
T  24185586 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaa 24185632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 15048304 - 15048459
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||||| |  |||||||| |||||||||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  15048304 atcaaaaccacatttaataagtgtatacctccgctttatatccttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 15048403  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagca 226  Q
    | ||| || |||||||| || || ||||||||||||||||| ||||| ||||||||    
T  15048404 ttaagcacgcaaaggatgtgcctacataaaatgcctttaaattcaaacaagcagca 15048459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 38177733 - 38177578
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataacaaggt---actgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||||| |  ||||| || |||||||||||||||| || ||||||||||  || |   ||  | || ||||| ||  ||||     
T  38177733 atcaaaaccacatttaataagtgtatacctccgttttatatccttcctccaccgtgccaaaatataattagatgacacgaaatctgttttcccaatgagc 38177634  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaataagcagca 226  Q
    | ||| ||||||||||| || || ||||||||||||||||| ||||| ||||||||    
T  38177633 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaacaagcagca 38177578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 26304901 - 26304846
Alignment:
Q  19 caacttcgtaaaaggcatcacatgccttaccaactagttgcaattcaacatttcca 74  Q
    ||||||||||||||||||||||||| ||||||||  |||| || ||||||||||||    
T  26304901 caacttcgtaaaaggcatcacatgctttaccaacacgttgtaactcaacatttcca 26304846  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 49961523 - 49961457
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatataa 140  Q
    |||||| ||||||||||||||||| |  |||| ||| |||||||||||||||| || ||||||||||    
T  49961523 atcaaaaccacatttaataagtgtatacctccactttatatccttcctccaccgtgccaaaatataa 49961457  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 409001 - 409147
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||| | |  |||||||| ||||| |||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  409001 atcaaaaccacatttaataagtatatacctccgctttatatctttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 409100  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaa 217  Q
    | ||| ||||||||||| || || ||||||||||||||||| |||||    
T  409101 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaa 409147  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 414941 - 414795
Alignment:
Q  74 atcaaacccacatttaataagtgtgtgtctccgcttaatatccttcctccaccttgacaaaatata---acaaggtactgactcagttttacctgtgagt 170  Q
    |||||| ||||||||||||||| | |  |||||||| ||||| |||||||||| || |||||||||   | | || ||  | || ||||| ||| ||||     
T  414941 atcaaaaccacatttaataagtatatacctccgctttatatctttcctccaccgtgccaaaatataattagatggcacgaaatctgttttccctatgagc 414842  T
Q  171 tgaagaacacaaaggatatgtctgcataaaatgcctttaaactcaaa 217  Q
    | ||| ||||||||||| || || ||||||||||||||||| |||||    
T  414841 ttaagcacacaaaggatgtgcctacataaaatgcctttaaattcaaa 414795  T

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