View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3772_low_70 (Length: 363)
Name: NF3772_low_70
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3772_low_70 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 19 - 363
Target Start/End: Original strand, 43877463 - 43877807
Alignment:
| Q |
19 |
cggtgaattgaaaagaaccaagttagattatgatgatcatgttgactacagccacaacattgaagaagctgcatctgctctcagcgagatagaagaatgc |
118 |
Q |
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| T |
43877463 |
cggtgaattgaaaagaaccaagttagattatgatgatcatgttgactacagccacaacattgaagaagctgcatctgctctcagcgagatagaagaatgc |
43877562 |
T |
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| Q |
119 |
ttcttagaacaattggatgatgttcagacaaaacgattcacaaaagaaaaacctgcagagcatttgcaagaagagttagagagtcctaccaaaactgagg |
218 |
Q |
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| T |
43877563 |
ttcttagaacaattggatgatgttcagacaaaacgattcacaaaagaaaaacctgcagagcatttgcaagaagagttagagagtcctaccaaaactgagg |
43877662 |
T |
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| Q |
219 |
attcctgtctgagttctagttatagaaacggctcgacaacaactgagggatcaaatgctgacacaagtagtccatcaatagaaagtaaagacaccaatga |
318 |
Q |
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| T |
43877663 |
attcctgtctgagttctagttatagaaacggctcgacaacaactgagggatcaaatgctgacacaagtagtccatcaatagaaagtaaaaacaccaatga |
43877762 |
T |
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| Q |
319 |
tgtggagatggtagataaatttagtgattctatttcactcttgcc |
363 |
Q |
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| T |
43877763 |
tgtggagatggtagataaatttagtgattctatttcactcttgcc |
43877807 |
T |
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