View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3772_low_85 (Length: 326)

Name: NF3772_low_85
Description: NF3772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3772_low_85
NF3772_low_85
[»] chr6 (38 HSPs)
chr6 (1-192)||(32171489-32171680)
chr6 (85-192)||(34939766-34939873)
chr6 (66-186)||(34939541-34939661)
chr6 (76-187)||(2455837-2455948)
chr6 (64-155)||(27857417-27857508)
chr6 (76-187)||(32848528-32848639)
chr6 (94-192)||(281798-281896)
chr6 (66-184)||(31958506-31958624)
chr6 (91-187)||(2732194-2732290)
chr6 (76-187)||(2460083-2460194)
chr6 (94-184)||(32171333-32171423)
chr6 (95-144)||(2455683-2455732)
chr6 (91-148)||(26559186-26559243)
chr6 (75-187)||(8420128-8420240)
chr6 (122-186)||(32577964-32578028)
chr6 (106-146)||(32917265-32917305)
chr6 (85-169)||(32976023-32976107)
chr6 (70-125)||(2455078-2455132)
chr6 (132-187)||(9667973-9668028)
chr6 (76-146)||(3181001-3181071)
chr6 (1-55)||(4308641-4308695)
chr6 (81-187)||(10031759-10031865)
chr6 (81-187)||(33067185-33067291)
chr6 (66-104)||(33068524-33068562)
chr6 (78-181)||(33385560-33385665)
chr6 (69-102)||(430302-430335)
chr6 (26-59)||(8348294-8348327)
chr6 (98-187)||(10616496-10616584)
chr6 (69-146)||(28776643-28776720)
chr6 (69-146)||(28798347-28798424)
chr6 (4-57)||(32577933-32577986)
chr6 (122-186)||(725633-725697)
chr6 (66-126)||(1432227-1432287)
chr6 (159-187)||(4420670-4420698)
chr6 (91-184)||(24631859-24631954)
chr6 (66-130)||(24973949-24974013)
chr6 (140-184)||(27894076-27894120)
chr6 (151-183)||(30004921-30004953)
[»] chr4 (42 HSPs)
chr4 (160-322)||(45737969-45738131)
chr4 (70-187)||(47970323-47970440)
chr4 (160-281)||(45732611-45732727)
chr4 (76-187)||(2996600-2996711)
chr4 (105-192)||(6987702-6987789)
chr4 (57-192)||(11264323-11264458)
chr4 (98-186)||(28406940-28407028)
chr4 (66-187)||(1312868-1312989)
chr4 (77-146)||(18628486-18628555)
chr4 (67-186)||(21157796-21157915)
chr4 (70-187)||(28615550-28615668)
chr4 (66-192)||(44319971-44320097)
chr4 (66-130)||(19429392-19429456)
chr4 (66-146)||(25717661-25717741)
chr4 (66-182)||(29375935-29376051)
chr4 (76-184)||(45128242-45128350)
chr4 (76-187)||(27123284-27123395)
chr4 (68-146)||(25583660-25583738)
chr4 (76-189)||(33534101-33534214)
chr4 (76-141)||(39931306-39931371)
chr4 (1-57)||(2996643-2996699)
chr4 (66-146)||(54426112-54426191)
chr4 (66-125)||(15173225-15173283)
chr4 (118-224)||(21952935-21953044)
chr4 (95-186)||(23819117-23819208)
chr4 (79-146)||(28232613-28232680)
chr4 (66-144)||(21731578-21731655)
chr4 (64-146)||(41097177-41097258)
chr4 (69-115)||(52333697-52333743)
chr4 (4-57)||(18628500-18628553)
chr4 (66-179)||(19304961-19305074)
chr4 (159-192)||(19429731-19429764)
chr4 (110-186)||(29263398-29263475)
chr4 (65-130)||(46860002-46860067)
chr4 (160-192)||(5131266-5131298)
chr4 (70-146)||(8469251-8469326)
chr4 (122-178)||(10812544-10812600)
chr4 (159-187)||(14011261-14011289)
chr4 (76-132)||(17125630-17125686)
chr4 (106-186)||(21043197-21043277)
chr4 (235-318)||(24193465-24193549)
chr4 (69-125)||(30770978-30771034)
[»] chr7 (37 HSPs)
chr7 (76-187)||(48157052-48157163)
chr7 (82-187)||(22387834-22387939)
chr7 (76-176)||(36598288-36598388)
chr7 (66-193)||(12234811-12234938)
chr7 (65-179)||(31751680-31751789)
chr7 (66-143)||(8427084-8427161)
chr7 (106-186)||(4966184-4966264)
chr7 (66-186)||(40428583-40428703)
chr7 (66-181)||(33894660-33894775)
chr7 (97-187)||(503301-503391)
chr7 (66-116)||(29363606-29363656)
chr7 (76-130)||(30751603-30751657)
chr7 (106-187)||(33645922-33646004)
chr7 (70-140)||(43854967-43855037)
chr7 (82-172)||(44686972-44687062)
chr7 (85-186)||(27626064-27626165)
chr7 (70-187)||(41040192-41040309)
chr7 (98-174)||(12834916-12834992)
chr7 (66-186)||(27496334-27496449)
chr7 (66-186)||(27502992-27503107)
chr7 (76-183)||(44808189-44808296)
chr7 (66-104)||(2727280-2727318)
chr7 (120-186)||(27517833-27517898)
chr7 (150-187)||(1710757-1710794)
chr7 (67-148)||(15321707-15321788)
chr7 (76-129)||(37064146-37064199)
chr7 (66-130)||(45593613-45593677)
chr7 (66-187)||(46082063-46082184)
chr7 (90-138)||(1431939-1431987)
chr7 (66-130)||(18765369-18765432)
chr7 (63-115)||(21073236-21073288)
chr7 (9-61)||(21247566-21247618)
chr7 (1-57)||(22387840-22387896)
chr7 (276-316)||(22388052-22388092)
chr7 (66-126)||(25014037-25014097)
chr7 (88-148)||(30535629-30535689)
chr7 (134-190)||(47134747-47134803)
[»] chr3 (38 HSPs)
chr3 (71-187)||(37273161-37273277)
chr3 (67-174)||(24624250-24624357)
chr3 (94-189)||(43115081-43115176)
chr3 (74-187)||(31710817-31710930)
chr3 (74-187)||(31711072-31711185)
chr3 (75-187)||(31010429-31010541)
chr3 (76-187)||(21574517-21574630)
chr3 (71-192)||(41724233-41724355)
chr3 (69-138)||(22667479-22667548)
chr3 (69-138)||(22724118-22724187)
chr3 (66-143)||(24158438-24158515)
chr3 (66-187)||(48528583-48528704)
chr3 (66-182)||(20210850-20210966)
chr3 (91-187)||(39311626-39311722)
chr3 (91-182)||(1810009-1810100)
chr3 (86-184)||(50004682-50004781)
chr3 (98-187)||(5292474-5292563)
chr3 (98-187)||(24281074-24281163)
chr3 (86-187)||(26542564-26542665)
chr3 (69-178)||(41033181-41033289)
chr3 (66-130)||(20194955-20195019)
chr3 (76-184)||(29771868-29771976)
chr3 (122-186)||(49465914-49465978)
chr3 (79-130)||(45590735-45590786)
chr3 (76-187)||(48588684-48588795)
chr3 (22-56)||(2719540-2719574)
chr3 (66-116)||(18405753-18405802)
chr3 (66-192)||(30923821-30923946)
chr3 (106-187)||(14548683-14548764)
chr3 (76-121)||(21872227-21872272)
chr3 (76-192)||(11253523-11253639)
chr3 (75-115)||(25129878-25129918)
chr3 (17-57)||(25182947-25182987)
chr3 (150-190)||(25866969-25867009)
chr3 (70-142)||(26330249-26330321)
chr3 (279-319)||(33081307-33081347)
chr3 (159-187)||(44295556-44295584)
chr3 (159-187)||(50760620-50760648)
[»] chr1 (48 HSPs)
chr1 (76-187)||(31517672-31517783)
chr1 (87-184)||(34380475-34380572)
chr1 (66-187)||(44815225-44815346)
chr1 (66-146)||(4549463-4549543)
chr1 (76-186)||(23373245-23373354)
chr1 (66-184)||(33723304-33723422)
chr1 (66-146)||(5157140-5157220)
chr1 (76-183)||(15581285-15581392)
chr1 (70-182)||(6231742-6231854)
chr1 (67-186)||(3110019-3110138)
chr1 (76-187)||(12564431-12564542)
chr1 (76-171)||(45327623-45327718)
chr1 (66-184)||(4868430-4868547)
chr1 (76-130)||(5924097-5924151)
chr1 (76-146)||(24279817-24279887)
chr1 (76-130)||(27807199-27807253)
chr1 (77-187)||(32515374-32515484)
chr1 (66-144)||(36070251-36070329)
chr1 (127-192)||(33975592-33975657)
chr1 (4-57)||(43371838-43371891)
chr1 (76-192)||(10439708-10439824)
chr1 (67-123)||(14737649-14737705)
chr1 (91-187)||(26179499-26179594)
chr1 (103-187)||(37811879-37811963)
chr1 (76-111)||(15361814-15361849)
chr1 (76-143)||(16980874-16980941)
chr1 (76-187)||(27140505-27140616)
chr1 (69-187)||(1662600-1662718)
chr1 (86-144)||(4200304-4200362)
chr1 (76-130)||(9507315-9507369)
chr1 (111-181)||(15579515-15579585)
chr1 (66-116)||(24460323-24460373)
chr1 (66-128)||(25719757-25719819)
chr1 (97-187)||(28389046-28389136)
chr1 (76-186)||(37593616-37593726)
chr1 (76-146)||(40485705-40485775)
chr1 (66-148)||(41638230-41638312)
chr1 (76-146)||(43420326-43420396)
chr1 (4-57)||(4033964-4034017)
chr1 (91-180)||(10089740-10089829)
chr1 (76-149)||(11996962-11997035)
chr1 (91-178)||(17628635-17628718)
chr1 (105-146)||(27146215-27146256)
chr1 (64-181)||(29723522-29723639)
chr1 (70-146)||(2295165-2295240)
chr1 (66-146)||(18327068-18327148)
chr1 (132-192)||(26184770-26184830)
chr1 (9-57)||(42757129-42757177)
[»] chr2 (45 HSPs)
chr2 (76-180)||(43456639-43456743)
chr2 (66-187)||(15120210-15120331)
chr2 (66-146)||(22878166-22878246)
chr2 (77-144)||(19243603-19243670)
chr2 (64-146)||(25609864-25609946)
chr2 (66-181)||(787365-787480)
chr2 (79-186)||(35485945-35486052)
chr2 (76-186)||(32821837-32821947)
chr2 (66-123)||(15370245-15370302)
chr2 (77-138)||(17443541-17443602)
chr2 (66-187)||(40158745-40158866)
chr2 (122-187)||(43065428-43065493)
chr2 (94-182)||(18884899-18884987)
chr2 (66-185)||(33231874-33231991)
chr2 (76-184)||(39621981-39622089)
chr2 (66-125)||(15757580-15757638)
chr2 (76-187)||(17221472-17221583)
chr2 (152-187)||(24098129-24098164)
chr2 (111-186)||(25661135-25661210)
chr2 (70-125)||(38787827-38787882)
chr2 (76-146)||(3458663-3458733)
chr2 (157-187)||(5781696-5781726)
chr2 (76-146)||(9996806-9996876)
chr2 (66-136)||(14209279-14209349)
chr2 (99-189)||(14299586-14299676)
chr2 (76-130)||(32616002-32616056)
chr2 (133-187)||(34652025-34652079)
chr2 (66-184)||(41809167-41809285)
chr2 (4-57)||(787402-787455)
chr2 (94-187)||(7283023-7283116)
chr2 (77-146)||(13866946-13867015)
chr2 (82-147)||(20258567-20258632)
chr2 (66-187)||(28677581-28677702)
chr2 (66-127)||(42852624-42852685)
chr2 (159-187)||(1647263-1647291)
chr2 (135-187)||(1939323-1939375)
chr2 (77-144)||(5045101-5045166)
chr2 (66-130)||(11513980-11514044)
chr2 (66-145)||(26143564-26143640)
chr2 (66-146)||(28803452-28803532)
chr2 (98-146)||(29429711-29429759)
chr2 (99-182)||(38388718-38388802)
chr2 (160-192)||(41817190-41817222)
chr2 (66-122)||(43199927-43199983)
chr2 (86-186)||(43985237-43985337)
[»] chr5 (24 HSPs)
chr5 (97-192)||(28586719-28586814)
chr5 (66-145)||(34205310-34205389)
chr5 (75-179)||(32172688-32172792)
chr5 (76-187)||(37611147-37611258)
chr5 (76-187)||(37787877-37787988)
chr5 (76-186)||(8089964-8090074)
chr5 (80-187)||(17259244-17259351)
chr5 (66-187)||(4619734-4619855)
chr5 (69-146)||(38047804-38047881)
chr5 (66-186)||(31208500-31208620)
chr5 (76-186)||(2880478-2880589)
chr5 (66-204)||(8177454-8177593)
chr5 (71-130)||(15015928-15015986)
chr5 (121-187)||(6109510-6109576)
chr5 (105-187)||(37526160-37526242)
chr5 (105-187)||(37588321-37588403)
chr5 (105-187)||(37690597-37690679)
chr5 (78-136)||(42181019-42181077)
chr5 (100-145)||(29336699-29336744)
chr5 (66-143)||(42500165-42500240)
chr5 (66-146)||(7674716-7674795)
chr5 (98-186)||(11700332-11700420)
chr5 (76-144)||(14599304-14599372)
chr5 (126-186)||(32897485-32897545)
[»] chr8 (37 HSPs)
chr8 (76-186)||(6950350-6950460)
chr8 (66-146)||(43368622-43368702)
chr8 (66-129)||(14926904-14926967)
chr8 (66-144)||(2487930-2488008)
chr8 (78-148)||(24326097-24326167)
chr8 (66-187)||(7714269-7714390)
chr8 (106-187)||(8558687-8558768)
chr8 (97-186)||(14949894-14949983)
chr8 (92-192)||(26410301-26410402)
chr8 (76-181)||(30191073-30191178)
chr8 (78-189)||(21130639-21130748)
chr8 (95-182)||(2482895-2482982)
chr8 (66-193)||(39551131-39551258)
chr8 (113-187)||(4055585-4055659)
chr8 (66-187)||(11183572-11183691)
chr8 (76-186)||(7918713-7918815)
chr8 (86-179)||(30013253-30013346)
chr8 (66-126)||(8535977-8536037)
chr8 (69-144)||(41589657-41589731)
chr8 (4-58)||(6526199-6526253)
chr8 (66-144)||(30251376-30251453)
chr8 (4-57)||(7918728-7918781)
chr8 (91-184)||(13000371-13000464)
chr8 (1-42)||(14926926-14926967)
chr8 (159-192)||(31705107-31705140)
chr8 (76-180)||(37740359-37740462)
chr8 (76-116)||(778487-778527)
chr8 (66-186)||(2091791-2091911)
chr8 (66-122)||(8806623-8806679)
chr8 (76-184)||(11494340-11494448)
chr8 (159-187)||(11795119-11795147)
chr8 (66-187)||(12361219-12361342)
chr8 (86-146)||(25881357-25881417)
chr8 (66-186)||(33553268-33553388)
chr8 (196-224)||(34788495-34788523)
chr8 (160-192)||(41606919-41606951)
chr8 (66-146)||(45071442-45071522)
[»] scaffold0311 (1 HSPs)
scaffold0311 (86-181)||(10559-10654)
[»] scaffold0159 (1 HSPs)
scaffold0159 (157-187)||(27028-27058)
[»] scaffold0141 (1 HSPs)
scaffold0141 (69-143)||(9703-9777)
[»] scaffold0110 (1 HSPs)
scaffold0110 (76-145)||(4155-4224)
[»] scaffold0428 (1 HSPs)
scaffold0428 (77-137)||(3983-4043)


Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 32171680 - 32171489
Alignment:
Q  1 atttactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttataagtcagcttggattggtttatttgaacttatttactgacata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32171680 atttactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttataagtcagcttggattggtttatttgaacttatttactgacata 32171581  T
Q  101 agcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32171580 agcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctccagga 32171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 34939873 - 34939766
Alignment:
Q  85 cttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    ||||| || |||||||| ||||||||| |||| || |||||||||| ||||||| ||||||| |  ||||| || |||||||||||||||||||||| ||    
T  34939873 cttatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataaact 34939774  T
Q  185 ctcaagga 192  Q
    ||| ||||    
T  34939773 ctccagga 34939766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 34939661 - 34939541
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||||||||| || |||| |||  | |||| | | || ||| ||||||||| ||||||||||||||| || ||| | |  ||||||    
T  34939661 ttggattggcttatttgaacttatctagtgacgtaacgacttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgtttt 34939562  T
Q  166 cagcttatttccataagctct 186  Q
    |||||||||||||||| ||||    
T  34939561 cagcttatttccataacctct 34939541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 2455948 - 2455837
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| ||| | |||||||| ||| |||| || || | |||||||| ||||||||||||||| |   |||| |||| |||||| |||||||    
T  2455948 ttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttattt 2455849  T
Q  176 ccataagctctc 187  Q
    ||||||||||||    
T  2455848 ccataagctctc 2455837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 27857508 - 27857417
Alignment:
Q  64 gcttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccat 155  Q
    ||||||| ||||||||||||  |||| ||||||||||  || |||||| |||| ||||||||||||| | ||||||||||||| | ||||||    
T  27857508 gcttggactggtttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccat 27857417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 32848528 - 32848639
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| |||||||||||||||||||||| | | | ||||||||||| ||||| | |||||||||  ||||| |  ||| |||| ||||||     
T  32848528 ttatttgagcttatctactgacataagcatttgtgagtccgttggggagagcttatggaaatagcttatgatatttccataatttgtgttcaacttatta 32848627  T
Q  176 ccataagctctc 187  Q
     |||||||||||    
T  32848628 tcataagctctc 32848639  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 281798 - 281896
Alignment:
Q  94 tgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||| | ||||||||||| ||||||||||| | |||| |||||||||| |  || || |  |||||||||||||||||||| ||||||| ||||    
T  281798 tgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctagga 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 31958506 - 31958624
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||||| ||| | |||  |||| |||||||||||||||||||| ||||||||||||| | |||| | | |||| |  ||| | | |||||||    
T  31958506 ttggattggtttatctgagcatatcgactgccataagcatttgtgagactgattgggagagcttatgaaaaccattaatgacatgtccttaatctgtttt 31958605  T
Q  166 cagcttatttccataagct 184  Q
     |||||||||| |||||||    
T  31958606 tagcttatttctataagct 31958624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 2732194 - 2732290
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||| ||||||||||| |||| | |||||| ||||||| || |||||   ||||| || ||||||||||||| ||| | ||||||||    
T  2732194 tactgacataagcacttgtgagactgtttggaaaagcttatggaaacagctaatgatctgtccataaattgttttcagcttacttctagaagctctc 2732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 2460083 - 2460194
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| |||||  |||  |||||| | ||||||||||| ||| ||||||||| ||||||||||||||| |  ||  | |  |||||||| |||||||    
T  2460083 ttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 2460182  T
Q  176 ccataagctctc 187  Q
    ||||||||||||    
T  2460183 ccataagctctc 2460194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 32171333 - 32171423
Alignment:
Q  94 tgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    ||||||||||| ||| ||||||| ||| ||||||||| | ||||| ||||||| |  ||||  | || |||||||||||||||||||||||    
T  32171333 tgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagct 32171423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 2455732 - 2455683
Alignment:
Q  95 gacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    |||||||||||||||||||||| |||  |||||||| |||||||||||||    
T  2455732 gacataagcatttgtgagactgtttgaaagagcttatggaaacaacttat 2455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 26559186 - 26559243
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgata 148  Q
    ||||| |||||||||||||||||||| |||| ||| |||| | |||||||||||||||    
T  26559186 tactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgata 26559243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 8420128 - 8420240
Alignment:
Q  75 tttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    ||||||||| ||||| || |||||||| || ||||||||||| | | |||||||||  |||| | ||||||| |  ||||  | || |||||| ||||||    
T  8420128 tttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatt 8420227  T
Q  175 tccataagctctc 187  Q
    |||||||||||||    
T  8420228 tccataagctctc 8420240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 32577964 - 32578028
Alignment:
Q  122 gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||||| | ||||||||||||| |  ||| ||| |||||||||||||||||||||| |||||    
T  32577964 gagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctct 32578028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 32917305 - 32917265
Alignment:
Q  106 ttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  32917305 ttgtgagactgtttgggagagcttatggaaacaacttatga 32917265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 32976107 - 32976023
Alignment:
Q  85 cttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagc 169  Q
    ||||||||||| |||||| | ||||||||||| |||| ||||||||  |||||| ||||||| |  ||||| | |||||||||||    
T  32976107 cttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttcagc 32976023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 2455132 - 2455078
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggaga 125  Q
    |||||||||||||||||||| |||| |||||||  |||||||||||| ||||||||    
T  2455132 attggtttatttgaacttatctactaacataag-ttttgtgagactgtttgggaga 2455078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 9667973 - 9668028
Alignment:
Q  132 ggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||||||||||| |  ||||| | ||||||||| |||||||||||||||||||    
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctc 9668028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 3181001 - 3181071
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||||||||||| ||| |||||||||| ||||||||||  |||  |||||| | | |||||||||||||    
T  3181001 ttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttatga 3181071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4308695 - 4308641
Alignment:
Q  1 atttactggcataaccacttctgacactgtttgagagagcttaggaaaacaactt 55  Q
    |||||||||||||| ||||  |||||||||||| |||| |||| |||||||||||    
T  4308695 atttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactt 4308641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 10031865 - 10031759
Alignment:
Q  81 tgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccata 180  Q
    |||| |||| |||||||||||||| ||||||||||| |||  ||||| || | || ||||||| || |  ||||| |  |||||||| ||||||||| ||    
T  10031865 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 10031766  T
Q  181 agctctc 187  Q
    |||||||    
T  10031765 agctctc 10031759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 33067291 - 33067185
Alignment:
Q  81 tgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccata 180  Q
    |||| |||| |||||||||||||| |||| |||||| ||||||||||||| || ||||  ||| || |  ||||| ||  |||||||| ||||||| | |    
T  33067291 tgaatttatctactgacataagcacttgtaagactgattgggagagcttatggcaacagtttaggaaatgtccataaatcgttttcagtttatttctaca 33067192  T
Q  181 agctctc 187  Q
    |||||||    
T  33067191 agctctc 33067185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 33068524 - 33068562
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagca 104  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  33068524 ttggattggcttatttgaacttatctactgacataagca 33068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 33385665 - 33385560
Alignment:
Q  78 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaa--ctgttttcagcttattt 175  Q
    |||||||||||| |||||| ||||||| |||||| |||| |||| |||| ||| ||||||| || |||| |  ||||| ||   |||||||||||| |||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 33385566  T
Q  176 ccataa 181  Q
    ||||||    
T  33385565 ccataa 33385560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 430302 - 430335
Alignment:
Q  69 gattggtttatttgaacttatttactgacataag 102  Q
    ||||||||||||||||||||||||||| ||||||    
T  430302 gattggtttatttgaacttatttactggcataag 430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 8348327 - 8348294
Alignment:
Q  26 actgtttgagagagcttaggaaaacaacttataa 59  Q
    |||||||||||||||||| |||||||||||||||    
T  8348327 actgtttgagagagcttacgaaaacaacttataa 8348294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 10616496 - 10616584
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||||| |  ||| | |  ||| ||||||||||||  ||||||||||    
T  10616496 ataagcatttgtga-actatttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctc 10616584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 28776720 - 28776643
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||| || |||||  |||| |||| || |||| ||||||||||||  ||||||||| ||||||||||| |||||||    
T  28776720 gattggcttctttgagtttatctactaacgtaagaatttgtgagactatttgggagagtttaaggaaacagcttatga 28776643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 28798424 - 28798347
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||| || |||||  |||| |||| || |||| ||||||||||||  ||||||||| ||||||||||| |||||||    
T  28798424 gattggcttctttgagtttatctactaacgtaagaatttgtgagactatttgggagagtttaaggaaacagcttatga 28798347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 32577933 - 32577986
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    |||||||||||  ||||  |||| |||||||||||||||| |||||||||||||    
T  32577933 tactggcataaatacttgggacattgtttgagagagcttatgaaaacaacttat 32577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 725633 - 725697
Alignment:
Q  122 gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||||| | ||||||||||||| |  ||| |  ||| |||||||||||||||||||||||||    
T  725633 gagagcttatgaaaacaacttatgacatgtccgtagactattttcagcttatttccataagctct 725697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 1432287 - 1432227
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagag 126  Q
    |||||||||||||||| | ||||| |||| ||||||||| |||| |||||| ||| |||||    
T  1432287 ttggattggtttattttagcttatctactcacataagcaattgttagactgtttgagagag 1432227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 4420698 - 4420670
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  4420698 ctgttttcagcttatttccataagctctc 4420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 24631859 - 24631954
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaa--ctgttttcagcttatttccataagct 184  Q
    |||||| ||||||| |||||| |||  |||| |||| ||| |||||||||| ||||||  ||||| ||  ||||||| |||||||||||| |||||    
T  24631859 tactgatataagcacttgtgaaactatttggaagagtttatggaaacaactcatgatatgtccataaaagctgtttttagcttatttccaaaagct 24631954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 24973949 - 24974013
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||| | |||||||||||||| | |||||||||||| |||| ||| || |||| ||||||||    
T  24973949 ttggattagcttatttgaacttatctgctgacataagcacttgtaagattgtttggtagagctta 24974013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 27894120 - 27894076
Alignment:
Q  140 cttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    |||||||||  ||||| ||||||||||||||||||| ||||||||    
T  27894120 cttatgatatgtccataaactgttttcagcttattttcataagct 27894076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 30004953 - 30004921
Alignment:
Q  151 tccatgaactgttttcagcttatttccataagc 183  Q
    ||||| |||||||||||||||||||||||||||    
T  30004953 tccataaactgttttcagcttatttccataagc 30004921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 7e-80; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 160 - 322
Target Start/End: Complemental strand, 45738131 - 45737969
Alignment:
Q  160 tgttttcagcttatttccataagctctcaaggaaggatagcttatatggaaacagtttgactttagtgttatttcttgttgtaggaatgacttatacata 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45738131 tgttttcagcttatttccataagctctcaaggaaggatagcttatatggaaacagtttgactttagtgttatttcttgttgtaggaatgacttatacata 45738032  T
Q  260 agaatttattgatacatgtttatgttataagcgctcaattaagatatttatccaaacaaaact 322  Q
    || ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  45738031 agcatttattgatacacgtttatgttataagcgctcaattaagttatttatccaaacaaaact 45737969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 47970440 - 47970323
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagc 169  Q
    |||||||||||||| ||||| |||||||||||||| |||||| |||| |  ||| |||||| |||||| |||| ||| |  ||||| || ||||||||||    
T  47970440 attggtttatttgagcttatctactgacataagcacttgtgaaactgttatggaaagcttatggaaactacttgtgacatttccataaattgttttcagc 47970341  T
Q  170 ttatttccataagctctc 187  Q
    |||||| |||||||||||    
T  47970340 ttatttgcataagctctc 47970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 45732727 - 45732611
Alignment:
Q  160 tgttttcagcttatttccataagctctcaaggaaggatagcttatatggaaacagtttgactttagtgttatttcttgttgtaggaatgacttatacata 259  Q
    ||||||||||||||||||||||||||||     |||||| ||||||||||||| |||| |||||  || |||||||||||| || ||||||||| |||||    
T  45732727 tgttttcagcttatttccataagctctc----gaggatatcttatatggaaactgttt-acttttatgctatttcttgttgcagaaatgacttacacata 45732633  T
Q  260 agaatttattgatacatgttta 281  Q
    |  | |||||||||||||||||    
T  45732632 aacacttattgatacatgttta 45732611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 2996711 - 2996600
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||||||||||| ||||||||||| || |||||||| ||| ||||||||| | ||||||||||||| |  ||||| | || |||||| |||||||    
T  2996711 ttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattt 2996612  T
Q  176 ccataagctctc 187  Q
     |||| ||||||    
T  2996611 tcatacgctctc 2996600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 6987702 - 6987789
Alignment:
Q  105 tttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| |  ||||| |||| |||||| ||||||||||||||||||| ||||    
T  6987702 tttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccagga 6987789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 11264458 - 11264323
Alignment:
Q  57 taagtcagcttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatg 156  Q
    |||||| | ||||||||| ||||||||   ||| ||||  ||||| ||| |||||||||| |||||||||| ||  ||| |||||||||| |  |||||     
T  11264458 taagtctgtttggattggcttatttgagtctatctactagcataaacatctgtgagactgtttgggagagcatatagaatcaacttatgacatgtccata 11264359  T
Q  157 aactgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||||| ||||||||||||||||||| ||||    
T  11264358 aactgttttcaacttatttccataagctctctagga 11264323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 28407028 - 28406940
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    |||| |||||||||||||||||| ||||||||| |||||||||| |||| |  | ||| |||| ||| |||||||||||||||||||||    
T  28407028 ataaacatttgtgagactggttgagagagcttacggaaacaactcatgacatattcataaactatttgcagcttatttccataagctct 28406940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 1312989 - 1312868
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||||||| |||||| ||||| ||||||||| |||| ||||| |||  |||| ||| | ||||||||||| | |  | ||| |||||||||    
T  1312989 ttggattgacttatttgcacttatctactggcataagcatgtgtgtgactgtttgatagagtttacgaaaacaacttattacatattcataaactgtttt 1312890  T
Q  166 cagcttatttccataagctctc 187  Q
    |||||||||||||||| |||||    
T  1312889 cagcttatttccataaactctc 1312868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||| | |||||||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 21157915 - 21157796
Alignment:
Q  67 tggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttc 166  Q
    |||||| | |||||||| || || |||||||||||||| |||| |||||| |||| ||||||||  |||||| ||||||| |  | ||  | |||||||     
T  21157915 tggatttgcttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgttttt 21157816  T
Q  167 agcttatttccataagctct 186  Q
    ||||||||||||||||||||    
T  21157815 agcttatttccataagctct 21157796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 28615668 - 28615550
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaagga-aacaacttatgatacctccatgaactgttttcag 168  Q
    ||||| |||||||| ||||| || |||||||||||||||| |||||| || | |||||||||| | | |||||||||| |  ||||| |  | ||||||     
T  28615668 attggcttatttgagcttatctaatgacataagcatttgtaagactgtttcgaagagcttaagaataccaacttatgacatgtccattagatattttcac 28615569  T
Q  169 cttatttccataagctctc 187  Q
    |||||||||||||||||||    
T  28615568 cttatttccataagctctc 28615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 44320097 - 44319971
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||||||||| ||||  || || ||||| || ||||||||||| ||||||||||||| | |||||| |||||||   ||||| | || ||||    
T  44320097 ttggattggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaacaaattatgatgtatccattagctatttt 44319998  T
Q  166 cagcttatttccataagctctcaagga 192  Q
    || || |||| |||||| |||| ||||    
T  44319997 caactaattttcataagttctctagga 44319971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 19429392 - 19429456
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||| |||||||| |||||||||||  |||| || ||||||||||| |||||||||||||    
T  19429392 ttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgggagagctta 19429456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 25717741 - 25717661
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||  |||||||| ||||| ||| |||||||||| |||||| | || |||| |||||||| |||||||||||||||    
T  25717741 ttggattgtcttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatga 25717661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 29376051 - 29375935
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||||||||| || ||||||||||| ||||||  ||  ||  ||||||||| ||||||| ||||||| |  |||||    ||||||    
T  29376051 ttggattggcttatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccatattttgtttt 29375952  T
Q  166 cagcttatttccataag 182  Q
    || ||||||||||||||    
T  29375951 caacttatttccataag 29375935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 45128242 - 45128350
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||| ||| | ||||| ||  ||||| | || ||| ||||||||| |||||||||| ||   |  ||||||| |||||||||||||||||    
T  45128242 ttatttgaacttatctaccggcataaccacatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttattt 45128341  T
Q  176 ccataagct 184  Q
    |||||||||    
T  45128342 ccataagct 45128350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 27123284 - 27123395
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| |||||  |||  |||||| | ||||||||||| ||| ||||||||| ||||||||||||||| |  ||  | |  |||||||| |||||||    
T  27123284 ttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 27123383  T
Q  176 ccataagctctc 187  Q
    ||||||||||||    
T  27123384 ccataagctctc 27123395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 25583738 - 25583660
Alignment:
Q  68 ggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||| |||||||||  |||| | ||||||||| ||| |||||||||| ||||||| ||||| | |||||||||||||    
T  25583738 ggattgatttatttgagtttatcttctgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatga 25583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 33534101 - 33534214
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| || ||||||||| | |||||||| |  ||| ||||||||| | |||||| || ||| |  ||||| |  ||||||||||||||||    
T  33534101 ttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattt 33534200  T
Q  176 ccataagctctcaa 189  Q
     |||||||||||||    
T  33534201 tcataagctctcaa 33534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 39931306 - 39931371
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaact 141  Q
    ||||||||| ||||||| |||||||| || |||||||||||  || |||||||||| |||||||||    
T  39931306 ttatttgaatttatttattgacataaacacttgtgagactgtctgtgagagcttaatgaaacaact 39931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2996699 - 2996643
Alignment:
Q  1 atttactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    ||||| || ||||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  2996699 atttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttat 2996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 54426191 - 54426112
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||| |||||||| ||||| ||||| ||||||  |||||||||||| |||||||| |||| | ||||| |||||||    
T  54426191 ttggattggcttatttgagcttatctactggcataagt-tttgtgagactgcttgggagaacttaggaaaacagcttatga 54426112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 15173225 - 15173283
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggaga 125  Q
    ||||||||  |||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  15173225 ttggattgacttatttgaacttatctactgacataag-ttttgtgagactgtttgggaga 15173283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 21953044 - 21952935
Alignment:
Q  118 ttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaaggaagg---atagcttatatggaaacag 214  Q
    ||||||||||||| ||||| ||||||||| |  ||||| | ||||||| || |||||||| ||||||||  ||||  |   |||||||||||| |||||     
T  21953044 ttgggagagcttatggaaagaacttatgacatgtccataacctgtttttagtttatttccttaagctctataggatagcttatagcttatatgaaaacaa 21952945  T
Q  215 tttgacttta 224  Q
    ||||||||||    
T  21952944 tttgacttta 21952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 23819208 - 23819117
Alignment:
Q  95 gacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||| || ||||||||||||| |||| |||| ||||| ||||| ||||||| |  ||||| |  |||||||| |||||||| |||||||||    
T  23819208 gacatcagaatttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctct 23819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 28232680 - 28232613
Alignment:
Q  79 tttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||| || |||||| |||| ||| ||||||| |||| |||||||  |||||||||||||||    
T  28232680 tttgaacttatctattgacatgagcacttgcgagactgtttggaagagcttgtggaaacaacttatga 28232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 21731578 - 21731655
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    |||||||||||||||||| | ||| ||||||||||||  ||||||||| || |||||||| |||| | ||||| |||||    
T  21731578 ttggattggtttatttgagcatatctactgacataag-ttttgtgagattgtttgggagaacttatgaaaacagcttat 21731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 41097177 - 41097258
Alignment:
Q  64 gcttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||  |||||||||||||| || || || ||||| ||||||||||| | |||||||||||  ||||||||| ||||    
T  41097177 gcttggattgagttatttgaacttatcta-tgtcaaaagcacttgtgagactgttcgggagagcttatagaaacaactaatga 41097258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 52333743 - 52333697
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagact 115  Q
    |||||| |||||||| ||||||||||||| |||||| ||||||||||    
T  52333743 gattggcttatttgagcttatttactgacctaagcacttgtgagact 52333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 18628500 - 18628553
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    ||||| ||||| ||||| ||| |||||||| ||||||||| |||||||||||||    
T  18628500 tactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 18628553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 19305074 - 19304961
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||||||||  |||| || |||||||||||||||||||| ||  |||||||  ||  ||||||| ||||||| |  ||||| |  ||||||    
T  19305074 ttggattgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccataagttgtttt 19304975  T
Q  166 cagcttatttccat 179  Q
    |||||| |||||||    
T  19304974 cagcttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 19429764 - 19429731
Alignment:
Q  159 ctgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||||||||||||||||||||||| ||||    
T  19429764 ctgttttcagcttatttccataagctctccagga 19429731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 29263475 - 29263398
Alignment:
Q  110 gagactggttgggagagcttaag-gaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||| ||||||||||||||  |||||| |||||||||  | ||| |  ||||||||||||||||||| |||||||    
T  29263475 gagactgcttgggagagcttaattgaaacagcttatgatatgttcataagttgttttcagcttatttccacaagctct 29263398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 46860067 - 46860002
Alignment:
Q  65 cttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||||||  |||||||||||||| || | ||||||||| |||||| |||| ||| |||||||||    
T  46860067 cttggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagctta 46860002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 5131266 - 5131298
Alignment:
Q  160 tgttttcagcttatttccataagctctcaagga 192  Q
    |||||||||||||||||||||||||||| ||||    
T  5131266 tgttttcagcttatttccataagctctccagga 5131298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 8469251 - 8469326
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||| || ||||  ||||| |||||||| |||| || ||| ||||||||||||| | |||||||||||||    
T  8469251 attggtttattcgagcttacctactggcataagcacttgtaaggctg-ttgggagagcttacgtaaacaacttatga 8469326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 10812600 - 10812544
Alignment:
Q  122 gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttcca 178  Q
    ||||||||| ||||||||||| ||  |  | ||||||||||||||||||||||||||    
T  10812600 gagagcttatggaaacaacttttgtcatgtacatgaactgttttcagcttatttcca 10812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 14011289 - 14011261
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  14011289 ctgttttcagcttatttccataagctctc 14011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 17125630 - 17125686
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaag 132  Q
    ||||||||  ||||||| ||  ||||||||||||||||||| ||||||| |||||||    
T  17125630 ttatttgagtttatttattggtataagcatttgtgagactgtttgggagtgcttaag 17125686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 21043197 - 21043277
Alignment:
Q  106 ttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||||||| ||||||||| ||| ||||||| ||||||| || | ||| | ||||||||||  ||||| |||| |||||    
T  21043197 ttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttcatatgctct 21043277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 24193549 - 24193465
Alignment:
Q  235 ttgttgtaggaatgacttatacataagaatttat-tgatacatgtttatgttataagcgctcaattaagatatttatccaaacaa 318  Q
    ||||||||  ||| ||||||||||||| | |||| |||||   ||||||| |||||| ||||||||||| | |||||||||||||    
T  24193549 ttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataagtgctcaattaagttgtttatccaaacaa 24193465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 30771034 - 30770978
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggaga 125  Q
    ||||| |||||||||| ||||  |||||||||||||||||| |||||| ||| ||||    
T  30771034 gattgttttatttgaatttatccactgacataagcatttgtaagactgtttgagaga 30770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 48157052 - 48157163
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||||||||||||  |||||||||||||  |  ||||| | |||||||||||||||||    
T  48157052 ttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttattt 48157151  T
Q  176 ccataagctctc 187  Q
    ||||||| ||||    
T  48157152 ccataagatctc 48157163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 22387834 - 22387939
Alignment:
Q  82 gaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataa 181  Q
    |||||||||||||||||||| ||  |||||||||| ||||||||||||| | ||||||||||||  |  |  || ||||||||| | |||||||||||||    
T  22387834 gaacttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataa 22387933  T
Q  182 gctctc 187  Q
    ||||||    
T  22387934 gctctc 22387939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 36598288 - 36598388
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||  |||||||||||||| |||||||| || ||| ||||||||| ||||||| ||||||| |  | ||| | |||||||||||||||||    
T  36598288 ttatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T
Q  176 c 176  Q
    |    
T  36598388 c 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 12234811 - 12234938
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||| |||| ||||| ||||| ||| ||||  |||||||||| |||| | ||||||  |||||||||||||| |  || || | |||||||    
T  12234811 ttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgtttt 12234910  T
Q  166 cagcttatttccataagctctcaaggaa 193  Q
    |||||||||||||||||||||| |||||    
T  12234911 cagcttatttccataagctctctaggaa 12234938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 31751680 - 31751789
Alignment:
Q  65 cttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttt 164  Q
    |||||||||  |||||| ||||||| || | ||||||||||||||||||||| ||   |||||||| ||||||||||||||| || |||     | ||||    
T  31751680 cttggattgacttatttaaacttatgtagtcacataagcatttgtgagactgtttataagagcttatggaaacaacttatgacacgtcc-----ccgttt 31751774  T
Q  165 tcagcttatttccat 179  Q
    |||||||||||||||    
T  31751775 tcagcttatttccat 31751789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 8427161 - 8427084
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactta 143  Q
    |||||||| ||||||||| ||||| |||| ||||||| | ||||||||||| ||||| |||| || ||||||||||||    
T  8427161 ttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaactta 8427084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 4966264 - 4966184
Alignment:
Q  106 ttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||||||| || ||||||||||  ||||| ||||||||||  ||||| |  ||||||||| |||||||||||||||||    
T  4966264 ttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctct 4966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 40428703 - 40428583
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||| | |||||||||||||| |  |||||||| || ||||||||||   ||||| ||||||   | || |||||||| ||  | || |||||||||    
T  40428703 ttggattcgattatttgaacttatctgttgacataaccacttgtgagactatctgggaaagcttatacatacgacttatgacacgccgataaactgtttt 40428604  T
Q  166 cagcttatttccataagctct 186  Q
    |||||||||||||||||||||    
T  40428603 cagcttatttccataagctct 40428583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 33894775 - 33894660
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||| | |||||||| |||||  | ||||||||||| ||||||||||| ||| ||||||||| | ||||| | ||||| |  ||||| |  ||||||    
T  33894775 ttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgtttt 33894676  T
Q  166 cagcttatttccataa 181  Q
    ||||||||||| ||||    
T  33894675 cagcttatttcaataa 33894660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 503301 - 503391
Alignment:
Q  97 cataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||| ||||||||| |||| || ||||||||||| |||||  ||||||| |  ||||| |||| | ||||| ||||||||||||||||||    
T  503301 cataaacatttgtgacactgtttaggagagcttaaagaaacggcttatgacagatccataaactatgttcagattatttccataagctctc 503391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 29363656 - 29363606
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactg 116  Q
    ||||||||| |||||||||||||| |||| ||||||||| |||||||||||    
T  29363656 ttggattggcttatttgaacttatctactaacataagcacttgtgagactg 29363606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 30751657 - 30751603
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||| ||||||| |||||||||||||| ||||| ||||| |||||||||||||    
T  30751657 ttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagctta 30751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 33645922 - 33646004
Alignment:
Q  106 ttgtgagactggttgg-gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |  || || |  |||||| || ||||||||||||||||||    
T  33645922 ttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctc 33646004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 43854967 - 43855037
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaac 140  Q
    ||||| |||||||||||||| |||| ||||||||||||| || |||  ||||||||||||| | |||||||    
T  43854967 attggcttatttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaacaac 43855037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 44687062 - 44686972
Alignment:
Q  82 gaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagctta 172  Q
    |||||||| |||| |||||| |||||||||||||  ||   |||||||| ||||||||||||||| |  ||||||| ||||||||| ||||    
T  44687062 gaacttatctactaacataaacatttgtgagacttcttaaaagagcttatggaaacaacttatgacatgtccatgagctgttttcaactta 44686972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 27626064 - 27626165
Alignment:
Q  85 cttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    ||||| ||||||| | |||  |||||||| || ||| || |||||| ||||||| ||||||| |  ||||| ||||||||| | ||||||||||||||||    
T  27626064 cttatctactgacgtcagctcttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagct 27626163  T
Q  185 ct 186  Q
    ||    
T  27626164 ct 27626165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 41040309 - 41040192
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagc 169  Q
    |||| |||||||||  |||| |||||| ||||| ||||||||| ||  || | |||||||| ||||||| ||||||| |  ||||||| ||||| | ||     
T  41040309 attgatttatttgagtttatctactgatataagtatttgtgaggctctttagaagagcttatggaaacagcttatgacatatccatgagctgttatgagt 41040210  T
Q  170 ttatttccataagctctc 187  Q
    |||||||||||| |||||    
T  41040209 ttatttccataaactctc 41040192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 12834916 - 12834992
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    ||||||| || |||||||| |||| |||| ||| ||||||| ||||||| |  ||||| ||||||||||||||||||    
T  12834916 ataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttcagcttatt 12834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 27496334 - 27496449
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||||||| |  || | | |||||||||  |||||||||||     |||||||||||||||||| ||| |||| |  ||||| | |||||||    
T  27496334 ttggattggtttatttaagattgtctgctgacataaatatttgtgagac----cgggagagcttaaggaaac-actcatgacatgtccataagctgtttt 27496428  T
Q  166 cagcttatttccataagctct 186  Q
    |||||||||||||||| ||||    
T  27496429 cagcttatttccataaactct 27496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 27502992 - 27503107
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||||||| |  || | | |||||||||  |||||||||||     |||||||||||||||||| ||| |||| |  ||||| | |||||||    
T  27502992 ttggattggtttatttaagattgtctgctgacataaatatttgtgagac----cgggagagcttaaggaaac-actcatgacatgtccataagctgtttt 27503086  T
Q  166 cagcttatttccataagctct 186  Q
    |||||||||||||||| ||||    
T  27503087 cagcttatttccataaactct 27503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 44808296 - 44808189
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| |||||||| |  |||||||| |||| |||||| |||  ||| |||| | ||| ||||||||| |  ||||| | |||||||||||||||||    
T  44808296 ttatttgagcttatttattagcataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattt 44808197  T
Q  176 ccataagc 183  Q
     |||||||    
T  44808196 tcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2727280 - 2727318
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagca 104  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  2727280 ttggattgatttatttgaacttatctactgacataagca 2727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 27517833 - 27517898
Alignment:
Q  120 gggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||||||||||||| ||||||||| |  ||||| | | ||||||||||||||||||||| ||||    
T  27517833 gggagagcttaaggaaa-aacttatgacatgtccataagcagttttcagcttatttccataaactct 27517898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 1710794 - 1710757
Alignment:
Q  150 ctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  1710794 ctccataaactgttttcagcttatttccataacctctc 1710757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 15321707 - 15321788
Alignment:
Q  67 tggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgata 148  Q
    |||||||  |||||||| ||||||||||||| |||||| || ||||| || || ||| || ||| | |||||||||||||||    
T  15321707 tggattgacttatttgagcttatttactgacttaagcacttttgagattgttttggatagtttatgaaaacaacttatgata 15321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 37064146 - 37064199
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctt 129  Q
    |||||||||||||| || ||||||||||| ||||||||| | ||| ||||||||    
T  37064146 ttatttgaacttatctagtgacataagcacttgtgagacggtttgtgagagctt 37064199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 45593677 - 45593613
Alignment:
Q  66 ttggattggtttatttgaacttat-ttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||||||||||| |||||||| ||||    
T  45593677 ttggattggcttatttgagtttatattactgacataagc-tttgtgagactgtttgggagaactta 45593613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 46082184 - 46082063
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| | |||||| ||||  ||||| ||||| || || |||||||| |   ||||||||| | ||||||||||||| |   |||| |  ||||||    
T  46082184 ttggattggctaatttgatcttacctactggcataaacaattttgagactgttaatgagagcttatgaaaacaacttatgacatgaccataagttgtttt 46082085  T
Q  166 cagcttatttccataagctctc 187  Q
    |||||||||| |||||||||||    
T  46082084 cagcttattttcataagctctc 46082063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 1431939 - 1431987
Alignment:
Q  90 ttactgacataagcatttgtgagactggttgggagagcttaaggaaaca 138  Q
    |||||| |||||||| ||||||||||| || |||||||||| |||||||    
T  1431939 ttactggcataagcacttgtgagactgtttaggagagcttatggaaaca 1431987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 18765432 - 18765369
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||||| ||||||||| ||||| || |||||||||  |||||||||||| |||||||| ||||    
T  18765432 ttggattgctttatttgagcttatctattgacataagt-tttgtgagactgtttgggagaactta 18765369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 21073288 - 21073236
Alignment:
Q  63 agcttggattggtttatttgaacttatttactgacataagcatttgtgagact 115  Q
    |||||||||| | |||||| | ||||| |||||||||||||| ||||||||||    
T  21073288 agcttggatttgcttatttaagcttatctactgacataagcaattgtgagact 21073236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 21247618 - 21247566
Alignment:
Q  9 gcataaccacttctgacactgtttgagagagcttaggaaaacaacttataagt 61  Q
    |||||||||||| ||| ||||||||  |||||||| |||||||| ||||||||    
T  21247618 gcataaccacttgtgaaactgtttgcaagagcttatgaaaacaatttataagt 21247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22387840 - 22387896
Alignment:
Q  1 atttactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    |||||||| ||||| ||| | ||| |||||||| ||||||||| |||||||||||||    
T  22387840 atttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttat 22387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 22388052 - 22388092
Alignment:
Q  276 tgtttatgttataagcgctcaattaagatatttatccaaac 316  Q
    ||||||||||||||||||| ||||||| | |||||||||||    
T  22388052 tgtttatgttataagcgcttaattaagttgtttatccaaac 22388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 25014097 - 25014037
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagag 126  Q
    ||||||| ||||||||||| |||| |||||||| ||||| |||| |||||| ||| |||||    
T  25014097 ttggattagtttatttgaatttatctactgacacaagcacttgtaagactgtttgagagag 25014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 30535689 - 30535629
Alignment:
Q  88 atttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgata 148  Q
    |||||||||||||| || ||| ||||||| || ||||| |||| | |||||||||||||||    
T  30535689 atttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgata 30535629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 47134747 - 47134803
Alignment:
Q  134 aaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaag 190  Q
    ||||||||||||| || ||||| |  |||||||||||||||| |||||||| |||||    
T  47134747 aaacaacttatgacacgtccataagttgttttcagcttattttcataagctttcaag 47134803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 37273277 - 37273161
Alignment:
Q  71 ttggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagct 170  Q
    |||| ||||||||||||||||| |  |||||||| | ||||||||| ||||||||||||| ||||||||||||||| |  ||||| |  |||||||| ||    
T  37273277 ttggcttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaact 37273178  T
Q  171 tatttccataagctctc 187  Q
    |||||||||||| ||||    
T  37273177 tatttccataagttctc 37273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 24624357 - 24624250
Alignment:
Q  67 tggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttc 166  Q
    |||||||| ||| |||||||||| |||| |||| |||| |||| |||||| |||| |||||||| | ||||| ||||||| |  ||||| ||||||||||    
T  24624357 tggattggcttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttc 24624258  T
Q  167 agcttatt 174  Q
    ||||||||    
T  24624257 agcttatt 24624250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 43115176 - 43115081
Alignment:
Q  94 tgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaa 189  Q
    |||||||| || |||||||| || |||| |||| ||| ||||||||||||||| |  ||||| |  ||||||||||||||||||||||||||||||    
T  43115176 tgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaa 43115081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 31710817 - 31710930
Alignment:
Q  74 gtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttat 173  Q
    |||||||||||||||| ||| |||||||| | ||||||| ||| ||| || ||||||   ||||||||||||| |   |||||| ||||||||||||||     
T  31710817 gtttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccatgagctgttttcagcttaa 31710916  T
Q  174 ttccataagctctc 187  Q
    ||||| ||||||||    
T  31710917 ttccaaaagctctc 31710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 31711072 - 31711185
Alignment:
Q  74 gtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttat 173  Q
    |||||||||||||||| ||| |||||||| | ||||||| ||| ||| || ||||||   ||||||||||||| |   |||||| ||||||||||||||     
T  31711072 gtttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccatgagctgttttcagcttaa 31711171  T
Q  174 ttccataagctctc 187  Q
    ||||| ||||||||    
T  31711172 ttccaaaagctctc 31711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 31010541 - 31010429
Alignment:
Q  75 tttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    ||||||||||||||  |||| ||||||| | |||||||  || ||| || ||||||  |||||||||||||| |  ||||| | |||||||||||||| |    
T  31010541 tttatttgaacttaactactaacataagaacttgtgagtgtgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttcagcttaat 31010442  T
Q  175 tccataagctctc 187  Q
    |||||||||||||    
T  31010441 tccataagctctc 31010429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 21574630 - 21574517
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgt--gagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttat 173  Q
    |||||||||||||| ||||| || || || ||||  ||||||| ||||||||||||| | ||||||||||||| |  | ||| | ||| ||| |||||||    
T  21574630 ttatttgaacttatctactggcaaaatcaattgtttgagactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttat 21574531  T
Q  174 ttccataagctctc 187  Q
    ||||||||||||||    
T  21574530 ttccataagctctc 21574517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 41724355 - 41724233
Alignment:
Q  71 ttggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagct 170  Q
    |||| |||||||||||||| |||||||||||| | |||| |||| | ||| || | |||| ||||||||||||||| |  ||||| |  |||||||||||    
T  41724355 ttggattatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccataagttgttttcagct 41724256  T
Q  171 ta-tttccataagctctcaagga 192  Q
    || |||  |||||||||||||||    
T  41724255 tattttatataagctctcaagga 41724233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 22667548 - 22667479
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaaca 138  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||||||| ||| ||||| ||| |||||||    
T  22667548 gattggcttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaaca 22667479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 22724187 - 22724118
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaaca 138  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||||||| ||| ||||| ||| |||||||    
T  22724187 gattggcttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaaca 22724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 24158438 - 24158515
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactta 143  Q
    ||||||||| |||||| | ||||| |||||||||||| | |||||| |||| ||| ||||||||| ||||||||||||    
T  24158438 ttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 48528704 - 48528583
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||||||||| |||||  | ||| ||||| ||||| ||||||| || || ||||||  |||| |||||||||  |  ||||| ||| |||||    
T  48528704 ttggattggtttatttgagcttatcgaatgatataagtatttgggagactgtttaggcgagcttgtggaagcaacttatggcatgtccataaacagtttt 48528605  T
Q  166 cagcttatttccataagctctc 187  Q
    ||||||||||| |||| |||||    
T  48528604 cagcttatttctataaactctc 48528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 20210850 - 20210966
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||| |||||||||  |||| ||||||||||| || ||||||||||| ||| |||| |||| | ||||   ||||||||  || ||||  ||||||    
T  20210850 ttggattgatttatttgaggttatctactgacataaccacttgtgagactgtttgagagatcttatgcaaacggattatgatatgtctatgagttgtttt 20210949  T
Q  166 cagcttatttccataag 182  Q
    ||||||||||| |||||    
T  20210950 cagcttatttctataag 20210966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 39311626 - 39311722
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||| ||||||||||  || |||||||||| |||||||  ||||||||  ||||  || | |||||| ||||||||||||| |||||    
T  39311626 tactgacataagcacttgtgagactattttggagagcttatggaaacagtttatgatatttccacaaatttttttcatcttatttccataaactctc 39311722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 1810100 - 1810009
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataag 182  Q
    |||| |||||| || ||||||||||  ||| ||||||||| ||||||||||||||| |  |||||||  ||||||| ||||||||| |||||    
T  1810100 tactaacataatcacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataag 1810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 50004781 - 50004682
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagag-cttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    ||||||||||||||||||| |||| |||||| ||| ||| | |||| ||||||||||||||| |  | | | | |||||||||||||||||| |||||||    
T  50004781 ttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgttcttaagctgttttcagcttatttcaataagct 50004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 5292474 - 5292563
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||| |||||||| |   |||||||| ||||||||| ||||||||| | | | || |  ||||||||||||||||||||||||||||    
T  5292474 ataagcacttgtgagattatatgggagagtttaaggaaaaaacttatgaaaacgctataagttgttttcagcttatttccataagctctc 5292563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 24281163 - 24281074
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||| ||||| || || ||| ||||||||| | ||||||||||||||| |||||| |  |||||||| |||| || |||||||||||    
T  24281163 ataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctctc 24281074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 26542665 - 26542564
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctc 185  Q
    |||| |||| ||||||| | |||| |||||| |||| ||||||||  ||||||||||||||||  || || |  |||||||| ||||||||||||| |||    
T  26542665 ttatctactcacataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataacttgttttcaacttatttccataaactc 26542566  T
Q  186 tc 187  Q
    ||    
T  26542565 tc 26542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 41033181 - 41033289
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcag 168  Q
    |||||||||||||||  |||| |||||||||||| | | |||||||| ||| ||||| |||||| |||||||| ||||||  || || | || |||| ||    
T  41033181 gattggtttatttgagtttatctactgacataaggactcgtgagact-gtttggagaacttaagtaaacaactaatgataaatcgataagctatttttag 41033279  T
Q  169 cttatttcca 178  Q
    ||||||||||    
T  41033280 cttatttcca 41033289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 20194955 - 20195019
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||||| ||||||||||||||| | ||  |||||||| ||||||||||| ||| |||||||||    
T  20194955 ttggattgatttatttgaacttatcttcttgcataagcagttgtgagactgtttgtgagagctta 20195019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 29771976 - 29771868
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||||||||  ||||||||||  | | ||||||||  ||  |||||||||| ||||||||||| || |  ||||| |  |||||||| |||||||    
T  29771976 ttatttgaacttatcaactgacataaatactcgtgagactatttatgagagcttaaagaaacaacttaggacatgtccataagttgttttcaacttattt 29771877  T
Q  176 ccataagct 184  Q
    |||||||||    
T  29771876 ccataagct 29771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 49465914 - 49465978
Alignment:
Q  122 gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    |||||||||  |||||||||||||| |  |||||||||| |||||| ||||||||||||| ||||    
T  49465914 gagagcttatagaaacaacttatgacatgtccatgaactattttcaacttatttccataaactct 49465978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 45590786 - 45590735
Alignment:
Q  79 tttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||||| ||||  |||||||| ||||||||||| |||||||||||||    
T  45590786 tttgaacttatctactagcataagcacttgtgagactgtttgggagagctta 45590735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 48588795 - 48588684
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||||||||||||| | | || ||||||||||| || ||| |||||||||   ||||||||||||| |  | | | || ||||||||||| ||||    
T  48588795 ttatttgaacttatttacttatacaaacatttgtgagattgcttgagagagcttatataaacaacttatgacatgttcttaaagtgttttcagctaattt 48588696  T
Q  176 ccataagctctc 187  Q
    ||| || |||||    
T  48588695 ccacaaactctc 48588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 2719574 - 2719540
Alignment:
Q  22 tgacactgtttgagagagcttaggaaaacaactta 56  Q
    ||||||||||||||||| |||||||||||||||||    
T  2719574 tgacactgtttgagagaacttaggaaaacaactta 2719540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 18405753 - 18405802
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactg 116  Q
    |||||||||||||||||| ||||| ||||||||||||  ||||||||||||    
T  18405753 ttggattggtttatttgagcttatctactgacataag-ttttgtgagactg 18405802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 30923821 - 30923946
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||| |||| |||||||| ||| |||| || ||||||||||| ||  ||||||| | ||||||| ||||||| |  || || | |||||||    
T  30923821 ttggattgccttacttgagcttatttattgatataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgtttt 30923919  T
Q  166 cagcttatttccataagctctcaagga 192  Q
    ||||||||||| |||| ||||| ||||    
T  30923920 cagcttatttctataaactctctagga 30923946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 14548683 - 14548764
Alignment:
Q  106 ttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||||||| ||| ||||||||| | ||||||| ||||| |  |  ||   |||||||||||||||||||||||||||||    
T  14548683 ttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctc 14548764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 21872227 - 21872272
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgg 121  Q
    |||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  21872227 ttatttgatcttatctactgacataagcacttgtgagactgtttgg 21872272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 11253639 - 11253523
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||  |||| ||||  |||||||| ||| ||||||| |||| |||  |||   ||||||||||||| |  || || ||||||||||||| |||||    
T  11253639 ttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacatatctataaactgttttcagcctattt 11253540  T
Q  176 ccataagctctcaagga 192  Q
    || ||||||||| ||||    
T  11253539 ccctaagctctctagga 11253523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 25129918 - 25129878
Alignment:
Q  75 tttatttgaacttatttactgacataagcatttgtgagact 115  Q
    ||||||||||||||| |||||||||||||| || |||||||    
T  25129918 tttatttgaacttatatactgacataagcacttatgagact 25129878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 25182947 - 25182987
Alignment:
Q  17 acttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    |||| ||| |||||||||||||||||| |||||||||||||    
T  25182947 acttgtgagactgtttgagagagcttatgaaaacaacttat 25182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 25866969 - 25867009
Alignment:
Q  150 ctccatgaactgttttcagcttatttccataagctctcaag 190  Q
    |||||| ||||||||||||||||||| ||||||| ||||||    
T  25866969 ctccataaactgttttcagcttattttcataagcactcaag 25867009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 26330249 - 26330321
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactt 142  Q
    |||| |||||||||  |||| |||||| ||||| ||||||||||||| || | |||||||| | |||||||||    
T  26330249 attgatttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaactt 26330321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 33081307 - 33081347
Alignment:
Q  279 ttatgttataagcgctcaattaagatatttatccaaacaaa 319  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  33081307 ttatgctataagcgctgaattaagctatttatccaaacaaa 33081347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 44295584 - 44295556
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  44295584 ctgttttcagcttatttccataagctctc 44295556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 50760648 - 50760620
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  50760648 ctgttttcagcttatttccataagctctc 50760620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 31517672 - 31517783
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||   |||||||| |||| |  | ||| | |||||||||||||||||    
T  31517672 ttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattt 31517771  T
Q  176 ccataagctctc 187  Q
     |||||||||||    
T  31517772 tcataagctctc 31517783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 34380572 - 34380475
Alignment:
Q  87 tatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    |||||||||||| || |||||||||||||||||  ||||||||| |||||||  |||||| |  ||||| | |||||||||||||||||| |||||||    
T  34380572 tatttactgacacaaacatttgtgagactggtttagagagcttacggaaacaggttatgacatttccataagctgttttcagcttatttcaataagct 34380475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 44815225 - 44815346
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||   ||| ||| || | ||||  | |||||||||  |  || || ||||||    
T  44815225 ttggtttggcttatttgaacttatctactgacataagcatttgtgagactttgtggaagaactcatggaactagcttatgatatgtgtataaattgtttt 44815324  T
Q  166 cagcttatttccataagctctc 187  Q
    ||||||||||||||||||||||    
T  44815325 cagcttatttccataagctctc 44815346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 4549463 - 4549543
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||| ||||||||  |||| ||||| ||||||||||| |||||||| |||||||||||||  ||||||||||||||    
T  4549463 ttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatga 4549543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 23373245 - 23373354
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||| | |||||| ||||||| |||||||| || |||||||||||||  |||||||||||||| |  ||||  | |||||||||||||||||    
T  23373245 ttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca-catctgttttcagcttattt 23373343  T
Q  176 ccataagctct 186  Q
    |  ||||||||    
T  23373344 ctgtaagctct 23373354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 33723304 - 33723422
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  |||||||||||||| ||||  ||||| || ||||||||||| |||||| | |||| ||||||| || |||| |  | |||||  ||||||    
T  33723304 ttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgtttt 33723403  T
Q  166 cagcttatttccataagct 184  Q
    |||||||||||||||||||    
T  33723404 cagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 5157220 - 5157140
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||  |||||||||||||| ||| ||||||| || |||||| |||| |||||||||||||  ||||||||||||||    
T  5157220 ttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 15581392 - 15581285
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||| | ||||| |||||||||||||| |||||||| || |||| |||||| | ||||||||||||||| |  || || | ||||||||||| |||||    
T  15581392 ttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctattt 15581293  T
Q  176 ccataagc 183  Q
    | ||||||    
T  15581292 ctataagc 15581285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 6231742 - 6231854
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagc 169  Q
    ||||||||||||||  |||| ||||  ||||| ||||||||||| || |  ||| |||| | |||||||||| |||| |  ||||| |||||||||||||    
T  6231742 attggtttatttgaggttatctactagcataaacatttgtgagattgttctggatagctcatggaaacaactaatgacatgtccataaactgttttcagc 6231841  T
Q  170 ttatttccataag 182  Q
    ||||||| |||||    
T  6231842 ttatttctataag 6231854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 3110138 - 3110019
Alignment:
Q  67 tggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttc 166  Q
    |||||||| |||||||| ||||  || ||||||||||| ||  ||||||| |||  ||| |||| | ||||||||| ||| || ||||| |  |||||||    
T  3110138 tggattggcttatttgagcttaactagtgacataagcacttccgagactgtttgtaagaacttatgcaaacaacttgtgacacatccataacttgttttc 3110039  T
Q  167 agcttatttccataagctct 186  Q
     |||||||||||||||||||    
T  3110038 cgcttatttccataagctct 3110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 12564431 - 12564542
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| |||||| ||||||| ||||| ||||| ||||||||||||| | | | | ||||||| |  || || |  ||||||||||||||||    
T  12564431 ttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagcttattt 12564530  T
Q  176 ccataagctctc 187  Q
    ||||||| ||||    
T  12564531 ccataagttctc 12564542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 171
Target Start/End: Complemental strand, 45327718 - 45327623
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagctt 171  Q
    ||||| || ||||| ||||| ||  |||| |||||||||| |||||| ||||||| ||||||||||||||| |  ||||| || ||||||||||||    
T  45327718 ttattggagcttatctactggcacgagcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaattgttttcagctt 45327623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 4868547 - 4868430
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||| |||||||||| |||| || ||||||| ||| ||||||||||| ||| ||||| || | |||||||||||||| |  || || |  ||||||    
T  4868547 ttggattgatttatttgaatttatctattgacataggcacttgtgagactgtttgagagag-tttatgaaacaacttatgacatgtcaataagttgtttt 4868449  T
Q  166 cagcttatttccataagct 184  Q
    || ||||||| ||||||||    
T  4868448 caacttatttacataagct 4868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 5924151 - 5924097
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||||||||||||||||||| |||||||| |||||| || |||| |||||    
T  5924151 ttatttgaacttatttactgacatacgcatttgtaagactgtttaggagtgctta 5924097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 24279887 - 24279817
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||||||||||||||||  ||||| || ||||||||||| ||||| || | || |||||||||||||||    
T  24279887 ttatttgaacttatttactagcataaacacttgtgagactgattgggggaacctatggaaacaacttatga 24279817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 27807253 - 27807199
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||||||||| | ||||||||||||||||||| |||||| ||| |||||||||    
T  27807253 ttatttgaacttttctactgacataagcatttgtaagactgtttgagagagctta 27807199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 32515374 - 32515484
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttc 176  Q
    |||||||  |||| |||| ||||||||| ||||||||||| ||||||||||||| ||||||| | ||||| |  || || |  |||||||| ||||| ||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatc 32515473  T
Q  177 cataagctctc 187  Q
     ||||||||||    
T  32515474 tataagctctc 32515484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 36070329 - 36070251
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||||||||||||  |||| | ||| |||||||| ||||||||||| || ||||| |||| | |||||||||||    
T  36070329 ttggattggtttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaacaacttat 36070251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 33975657 - 33975592
Alignment:
Q  127 cttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    |||||||||||  |||||||||  ||||| |||| |||||||||||||| ||||||||||| ||||    
T  33975657 cttaaggaaaccgcttatgatatgtccataaactattttcagcttattttcataagctctctagga 33975592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 43371838 - 43371891
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    ||||||||||| ||||| ||| |||||||||||||||||| ||||||| |||||    
T  43371838 tactggcataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 10439824 - 10439708
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||||||  | ||||||   ||||||||||  ||||||||||||| | ||||||  ||||| |  ||||| | ||| |||||||||||||    
T  10439824 ttatttgagcttatttatggccataagatcttgtgagactatttgggagagcttatgaaaacaaactatgacatgtccataatctgctttcagcttattt 10439725  T
Q  176 ccataagctctcaagga 192  Q
    |||||| ||||| ||||    
T  10439724 ccataaactctccagga 10439708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 14737649 - 14737705
Alignment:
Q  67 tggattggtttatttgaacttatttactgacataagcatttgtgagactggttggga 123  Q
    ||||||||||||||||| ||||||||||   ||||||| ||||||||||| ||||||    
T  14737649 tggattggtttatttgagcttatttactagaataagcacttgtgagactgtttggga 14737705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 26179594 - 26179499
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||| ||||| || ||||||||||| | ||||||| ||||||||||||||||||| |  | |||||  |||||||||| | ||||||||| |||||    
T  26179594 tactggcataaacacttgtgagactgttagggagagtttaaggaaacaacttatgacatgtgcatgagttgttttcagcat-tttccataaactctc 26179499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 37811963 - 37811879
Alignment:
Q  103 catttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||||| |||||||| |||| |||| | ||||| ||||||| |  | ||| ||||||||||| ||||||||||| |||||||    
T  37811963 catttgtgatactggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctc 37811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 15361849 - 15361814
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtga 111  Q
    |||||||||||||||||||| |||||||||||||||    
T  15361849 ttatttgaacttatttactgtcataagcatttgtga 15361814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 16980941 - 16980874
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactta 143  Q
    |||||||||||||| |||  ||||||| | ||||||||||  ||| ||||||||| ||||||||||||    
T  16980941 ttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaactta 16980874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 27140616 - 27140505
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||| ||| ||||| || |||||||| || |||| || ||  ||| ||||| ||||||||||| ||||||| |  ||||| |  ||||||||||||||||    
T  27140616 ttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttattt 27140517  T
Q  176 ccataagctctc 187  Q
     |||||||||||    
T  27140516 gcataagctctc 27140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 1662718 - 1662600
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcag 168  Q
    |||||| |||||||| ||||| ||||  |||||| |  || ||||||  ||| ||||||||| ||||||||||||||| |  ||||| || | |||| ||    
T  1662718 gattggcttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatgtccataaaatatttttag 1662619  T
Q  169 cttatttccataagctctc 187  Q
     |||||| |||||||||||    
T  1662618 tttattttcataagctctc 1662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 4200362 - 4200304
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    |||| |||||| ||||||||||||||||||| ||| ||||||| | | |||||||||||    
T  4200362 ttatatactgatataagcatttgtgagactgtttgtgagagctaatgaaaacaacttat 4200304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 9507369 - 9507315
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||||||| ||||| ||||  |||| ||||||||||||||| |||||||||||||    
T  9507369 ttatttgagcttatctactagcataggcatttgtgagactgtttgggagagctta 9507315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 15579585 - 15579515
Alignment:
Q  111 agactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataa 181  Q
    |||||| ||||||||||||  ||||||||||||||| |  ||||| |  |||| |||||||||||||||||    
T  15579585 agactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 24460323 - 24460373
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactg 116  Q
    ||||||||  |||||||||||||| ||||||||| |||| |||||||||||    
T  24460323 ttggattgacttatttgaacttatctactgacatgagcacttgtgagactg 24460373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 25719819 - 25719757
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagct 128  Q
    |||||||| |||||||||  |||||||||| | ||||||||| |||||||  |||||||||||    
T  25719819 ttggattgatttatttgagtttatttactggcttaagcatttatgagactctttgggagagct 25719757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 28389046 - 28389136
Alignment:
Q  97 cataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||| ||||||||||||| || ||||| |||  |||||||||||||||||  |  || || |||| ||| |||||||||||||| ||||    
T  28389046 cataagtatttgtgagactgcttaggagaacttccggaaacaacttatgatatgtttataaaatgttgtcaacttatttccataagttctc 28389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 37593616 - 37593726
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| ||||| ||||| || |||| |||||| |||||| | || | | | ||||||||||| |  | ||| | |||||||||||||||||    
T  37593616 ttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagcttattt 37593715  T
Q  176 ccataagctct 186  Q
     ||||||||||    
T  37593716 tcataagctct 37593726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 40485705 - 40485775
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||  || |||| ||||||||| ||||||||||| |||||||| ||||  |||||| |||||||    
T  40485705 ttatttgaaccaatctacttacataagcacttgtgagactgtttgggagaacttattgaaacatcttatga 40485775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 41638230 - 41638312
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgata 148  Q
    ||||||||  ||| |||| | ||| ||||| |||||||||||||||||||| ||||||||| ||| | |||||  ||||||||    
T  41638230 ttggattgtcttaattgagcctatctactggcataagcatttgtgagactgtttgggagagattatgaaaacagtttatgata 41638312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 43420396 - 43420326
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||||| ||||| ||| ||||||| || ||||||||||| ||| |||| |||| ||||||| |||||||    
T  43420396 ttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatga 43420326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 4033964 - 4034017
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    ||||||||||| ||||| ||| | |||||||||||||||| ||||| |||||||    
T  4033964 tactggcataaacacttgtgagattgtttgagagagcttatgaaaataacttat 4034017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 10089829 - 10089740
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccata 180  Q
    |||||| |||| || |||| |||||| || | |||||||||  ||| |||| ||||||| ||||| | ||||||||||||||||| ||||    
T  10089829 tactgatataaacacttgtcagactgcttagaagagcttaataaaataactaatgatacgtccataagctgttttcagcttattttcata 10089740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 11996962 - 11997035
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatac 149  Q
    |||||||||||||| ||| |||||||||| |||||| | |  ||  ||||| ||| ||||||||||||||||||    
T  11996962 ttatttgaacttatctacggacataagcacttgtgaaaatctttaagagagattagggaaacaacttatgatac 11997035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 17628718 - 17628635
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttcca 178  Q
    |||||||| ||||| ||||||||||| ||||   |||||| ||||||||||||||| |  ||||| | ||||||||||| ||||||||    
T  17628718 tactgacacaagcacttgtgagactg-ttgg---agcttatggaaacaacttatgacatgtccataagctgttttcagcatatttcca 17628635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 27146215 - 27146256
Alignment:
Q  105 tttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||    
T  27146215 tttgtgagacttgttggaagaacttaaggaaacaacttatga 27146256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 29723639 - 29723522
Alignment:
Q  64 gcttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtt 163  Q
    ||||||||||  | |||||| ||||||||||  |||||||| |||||| || | |||  ||| || | ||||||| ||||||| |  ||||| |||||||    
T  29723639 gcttggattgactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgtt 29723540  T
Q  164 ttcagcttatttccataa 181  Q
    |||| ||||||| |||||    
T  29723539 ttcaacttatttacataa 29723522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 2295240 - 2295165
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||| |||||||| ||||| ||||| ||||||  |||||||||||| |||||||| |||| | ||||| |||||||    
T  2295240 attggcttatttgagcttatctactggcataagt-tttgtgagactgtttgggagaacttatgaaaacagcttatga 2295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 18327068 - 18327148
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||| |||||||| ||||| ||||| |||||||| || ||| |||  |||| ||| |||| | |||||||||||||    
T  18327068 ttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttatga 18327148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 26184830 - 26184770
Alignment:
Q  132 ggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    ||||||| ||||||| |  ||||| | |||||||||| |||||||||||||||||| ||||    
T  26184830 ggaaacagcttatgacatgtccataagctgttttcagattatttccataagctctccagga 26184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 42757129 - 42757177
Alignment:
Q  9 gcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    |||||||||||| ||||||||||||  ||| |||| |||||||||||||    
T  42757129 gcataaccacttgtgacactgtttggaagaacttacgaaaacaacttat 42757177  T

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Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 43456639 - 43456743
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||||||||||||| |||||| || |||| |||||| |||  |||||||  | |||||||| |||| |  ||||| |||||||||||||||||||    
T  43456639 ttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttattt 43456738  T
Q  176 ccata 180  Q
    |||||    
T  43456739 ccata 43456743  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 15120331 - 15120210
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  |||||||||||||| ||||  ||||| || ||||||  ||| ||||||||||||| ||||||||||||||| |  | ||| | |||||||    
T  15120331 ttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgttcattagctgtttt 15120232  T
Q  166 cagcttatttccataagctctc 187  Q
     |||||||||  ||||||||||    
T  15120231 aagcttattttgataagctctc 15120210  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 22878246 - 22878166
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||  |||||||| |||||  ||||||||||||| ||||||||||| |||||||| |||| |||||||| ||||||    
T  22878246 ttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatga 22878166  T

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Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 19243670 - 19243603
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||  |||||| |||||    
T  19243670 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaaacagcttat 19243603  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 25609946 - 25609864
Alignment:
Q  64 gcttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||| ||||| |||||||| ||||| |||| ||||||| | ||||||||||| |||| | |||||| |||||||||||||||    
T  25609946 gcttgcattggcttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatga 25609864  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 787480 - 787365
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| ||||| || | ||| ||||| |||||||| |||||| |||| ||| |||| |||| | ||||| ||||||| |  ||||| | |||||||    
T  787480 ttggattggattattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgtttt 787381  T
Q  166 cagcttatttccataa 181  Q
    |||||||| |||||||    
T  787380 cagcttatctccataa 787365  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 35486052 - 35485945
Alignment:
Q  79 tttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttcca 178  Q
    ||||||||||| ||| |||||||| | ||||||||||| ||| |||| ||||   || ||||||||||||  | ||| | |||||||||||| |||||||    
T  35486052 tttgaacttatctaccgacataagaacttgtgagactgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttcca 35485953  T
Q  179 taagctct 186  Q
    || |||||    
T  35485952 taggctct 35485945  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 32821947 - 32821837
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||| ||||| |||  || ||||||||||  |||||| |||| |||| |||  |||||||||||||| |  ||||| | |||||||||| ||||||    
T  32821947 ttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttattt 32821848  T
Q  176 ccataagctct 186  Q
    | |||||||||    
T  32821847 ctataagctct 32821837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 15370245 - 15370302
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttggga 123  Q
    ||||||||  |||||||| ||||| ||||| |||||||||||||||||||| ||||||    
T  15370245 ttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga 15370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 17443541 - 17443602
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaaca 138  Q
    ||||||||||||| |||||| ||||||| ||||||||||| |||| |||| ||| |||||||    
T  17443541 tatttgaacttatatactgatataagcacttgtgagactgtttggaagagtttatggaaaca 17443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 40158866 - 40158745
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||| | ||| |||||||||||| | ||||||||||| ||||| || |||| | ||||| ||||||| |  |  || |  ||||||    
T  40158866 ttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgtttt 40158767  T
Q  166 cagcttatttccataagctctc 187  Q
    ||||||| || |||||||||||    
T  40158766 cagcttaattacataagctctc 40158745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 43065428 - 43065493
Alignment:
Q  122 gagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||||| | ||||||||||||| |  ||||| || ||||||||||||||||| ||||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctc 43065493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 18884987 - 18884899
Alignment:
Q  94 tgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataag 182  Q
    ||||||||| | |||| || ||| |||||||||||||  |||||| ||||||| |  ||||| | |||||||||| |||||||||||||    
T  18884987 tgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccattagctgttttcagattatttccataag 18884899  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 33231874 - 33231991
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||||||||| ||  |||| || || ||||| ||||||||  ||||  || ||||||||| |||||| |||||||  || ||||| | |||||||    
T  33231874 ttggattggtttattcgagattatctattggcataatcatttgtgttactgtctgagagagcttatggaaaccacttatg--acgtccataagctgtttt 33231971  T
Q  166 cagcttatttccataagctc 185  Q
    ||||| |||| |||||||||    
T  33231972 cagctgatttgcataagctc 33231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 39622089 - 39621981
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||| ||||   ||||||| ||| || |||| ||| |||| |||| | ||||||||||||| |  | ||| || ||||||||||||||||    
T  39622089 ttatttgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttattt 39621990  T
Q  176 ccataagct 184  Q
    || ||||||    
T  39621989 ccttaagct 39621981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 15757580 - 15757638
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggaga 125  Q
    ||||| |||||||||||| ||||||||||| ||||||  |||||||||||| ||||||||    
T  15757580 ttggaatggtttatttgagcttatttactggcataag-ttttgtgagactgcttgggaga 15757638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 17221472 - 17221583
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||| |||| ||||| ||| |||| || |||||||| | || |||||||| ||||| | ||||||| |  ||||| |||| |||| |||||||||    
T  17221472 ttatttgaaattatctactgtcattagcacttctgagactgttcggaagagcttatggaaatatcttatgacatatccataaactttttttagcttattt 17221571  T
Q  176 ccataagctctc 187  Q
    || |||| ||||    
T  17221572 ccgtaagatctc 17221583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 24098164 - 24098129
Alignment:
Q  152 ccatgaactgttttcagcttatttccataagctctc 187  Q
    |||| |||||||||||||||||||||||||||||||    
T  24098164 ccataaactgttttcagcttatttccataagctctc 24098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 25661210 - 25661135
Alignment:
Q  111 agactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    |||||| |||| |||||||| ||||| | ||||||| |  ||| | |||||||||||| |||||||||||||||||    
T  25661210 agactgtttggcagagcttacggaaatagcttatgaaatgtccttaaactgttttcagattatttccataagctct 25661135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 38787827 - 38787882
Alignment:
Q  70 attggtttatttgaacttatttactgacataagcatttgtgagactggttgggaga 125  Q
    |||||||||| ||| ||||| |||||||||||| ||||||||||||  ||||||||    
T  38787827 attggtttatgtgagcttatctactgacataagtatttgtgagactatttgggaga 38787882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 3458733 - 3458663
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||||| |||| |||||| ||||| || |||| ||||||  |||||||||||| | |||||||||||||    
T  3458733 ttatttgagcttacttactggcataaacacttgtcagactgaatgggagagcttatgaaaacaacttatga 3458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 187
Target Start/End: Complemental strand, 5781726 - 5781696
Alignment:
Q  157 aactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||||    
T  5781726 aactgttttcagcttatttccataagctctc 5781696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 9996876 - 9996806
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||||| |||||  |||  |||||| | ||||||||||| |||||||||||||  ||||||||||||||    
T  9996876 ttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatga 9996806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 14209349 - 14209279
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaa 136  Q
    ||||||||||||||||||  |||||||||   |||||||  || ||||||| ||||||||||||| |||||    
T  14209349 ttggattggtttatttgagtttatttactagtataagcacctgagagactgcttgggagagcttatggaaa 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 14299586 - 14299676
Alignment:
Q  99 taagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaa 189  Q
    |||||| ||| | ||||| |||| |||| ||| ||||||||||||||| |  |||||  | ||||||||||||||||| ||||||| ||||    
T  14299586 taagcacttgagggactgtttggaagagtttatggaaacaacttatgacatatccatacattgttttcagcttatttctataagctgtcaa 14299676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 32616056 - 32616002
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||||||||   |||||||||||||||||||||||| ||| | |||||||    
T  32616056 ttatttgaacttatcagctgacataagcatttgtgagactgtttgtgggagctta 32616002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 34652025 - 34652079
Alignment:
Q  133 gaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||| |  ||||| | ||||||||| |||||||||||||||||||    
T  34652025 gaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctc 34652079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 41809167 - 41809285
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||||||| ||  | |||||||  || ||||| || ||||||||||| |||  |||||||  ||||||||||||||| |  | ||| |  ||||||    
T  41809167 ttggattggttttttaaagcttatttgttggcataaacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttt 41809266  T
Q  166 cagcttatttccataagct 184  Q
     ||||||||||||||||||    
T  41809267 tagcttatttccataagct 41809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 787455 - 787402
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    ||||||||||| ||||| |||||||||||| |||| |||| ||||||| |||||    
T  787455 tactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttat 787402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 7283116 - 7283023
Alignment:
Q  94 tgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||| || ||||||||||  ||||   |||||  |||||||||||||||||  ||||| |  |||||||| ||||| |||||||||||||    
T  7283116 tgacataaacacttgtgagactatttggattagcttttggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctc 7283023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 13867015 - 13866946
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||| ||||| ||||| ||||| || ||||||||||| ||| |||| |||||| ||||||| |||||    
T  13867015 tatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatga 13866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 20258632 - 20258567
Alignment:
Q  82 gaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgat 147  Q
    ||||||||||||||||||||||| || |||||| | |||  |||||||| |||| || ||||||||    
T  20258632 gaacttatttactgacataagcacttatgagaccgtttgtaagagcttatggaatcagcttatgat 20258567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 28677581 - 28677702
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||| ||| ||||| ||||||||||  |||||| | |  | |||||| |||||||| |||| | ||||| ||||||| |  | ||| |  ||||||    
T  28677581 ttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataagttgtttt 28677680  T
Q  166 cagcttatttccataagctctc 187  Q
    | ||||||||||||||||||||    
T  28677681 cggcttatttccataagctctc 28677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 42852624 - 42852685
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagc 127  Q
    ||||||| | |||||||||||||| | ||| |||||||| ||||||||||| |||| |||||    
T  42852624 ttggatttgcttatttgaacttatctgctggcataagcacttgtgagactgtttggaagagc 42852685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 1647291 - 1647263
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  1647291 ctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 1939323 - 1939375
Alignment:
Q  135 aacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||| |  ||||| | ||||||||| |||||||||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctc 1939375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 5045101 - 5045166
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||||||||||||||||  | || ||||||||||| ||  |||||||||  ||||||||||||    
T  5045101 tatttgaacttatttactgacaacaacacttgtgagactgttt--gagagcttatagaaacaacttat 5045166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 11514044 - 11513980
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    ||||||||||||||||||  |||| ||||  |||||||| ||||||||||| ||  |||||||||    
T  11514044 ttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagctta 11513980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 26143564 - 26143640
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatg 145  Q
    ||||||||| || ||||| ||||| |||||||||||  |||| |||||||| |||||||| |||| | ||||||||||||    
T  26143564 ttggattggcttgtttgagcttatctactgacataa--attt-tgagactgtttgggagaacttacgaaaacaacttatg 26143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 28803452 - 28803532
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||  |||||||| ||||| ||| | ||||||||  |||||||||| ||| |||| | || |||||||||||||||    
T  28803452 ttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatga 28803532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 29429711 - 29429759
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||| ||||    
T  29429711 ataagcacttgtgagactgtttgggagagcttatagaaacaactaatga 29429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 38388802 - 38388718
Alignment:
Q  99 taagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt-cagcttatttccataag 182  Q
    |||||| ||||| ||| | |||||||| |||| || |||||||||||| |  | ||| ||||||||| |||||||||||||||||    
T  38388802 taagcacttgtgtgaccgtttgggagaacttatggtaacaacttatgacatgttcataaactgtttttcagcttatttccataag 38388718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 41817222 - 41817190
Alignment:
Q  160 tgttttcagcttatttccataagctctcaagga 192  Q
    |||||||||||||||||||||||||||| ||||    
T  41817222 tgttttcagcttatttccataagctctccagga 41817190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 43199983 - 43199927
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttggg 122  Q
    |||||||  ||||||||||||||| |||| | ||||||| ||||||||||| |||||    
T  43199983 ttggattcatttatttgaacttatctactcatataagcacttgtgagactgtttggg 43199927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 43985337 - 43985237
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctc 185  Q
    |||| ||||||||||| || |||| | |||| ||| ||||| |||  |||||||||||||| |  ||||| | || |||||| ||| |||||||||||||    
T  43985337 ttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaacttgtttccataagctc 43985238  T
Q  186 t 186  Q
    |    
T  43985237 t 43985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 28586719 - 28586814
Alignment:
Q  97 cataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||||||||| |||| ||||||||||||| ||||| | ||||||| |  ||| | | |||||||||||||||||| |||||||||| ||||    
T  28586719 cataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctagga 28586814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 34205389 - 34205310
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatg 145  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||  |||  || |||||||||| ||||||||||||||    
T  34205389 ttggattgacttatttgaacttatttactgacataagcatttatggaactattttggagagcttatggaaacaacttatg 34205310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 32172792 - 32172688
Alignment:
Q  75 tttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    ||||||||| ||||| ||||  |||||||| ||||||||  | ||||||||||||| ||||||||||||||| |  ||||| | |  |||||||||||||    
T  32172792 tttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatt 32172693  T
Q  175 tccat 179  Q
    |||||    
T  32172692 tccat 32172688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 37611147 - 37611258
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||| ||||| || ||| | |||||||| || ||| ||||||||| | ||||||||| ||| |  | ||| | |||||||||| ||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37611246  T
Q  176 ccataagctctc 187  Q
    ||||||||||||    
T  37611247 ccataagctctc 37611258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 37787877 - 37787988
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||| ||||| || ||| | |||||||| || ||| ||||||||| | ||||||||| ||| |  | ||| | |||||||||| ||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37787976  T
Q  176 ccataagctctc 187  Q
    ||||||||||||    
T  37787977 ccataagctctc 37787988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 8090074 - 8089964
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||||||||||| |||| ||| ||||| | | ||||||  ||| ||||||||| | |||||||||||||||  | | | | |||||||||||||||||    
T  8090074 ttatttgaacttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattt 8089975  T
Q  176 ccataagctct 186  Q
     ||||||||||    
T  8089974 tcataagctct 8089964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 17259351 - 17259244
Alignment:
Q  80 ttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccat 179  Q
    |||| ||||| |||| ||||||||| |||||||||| |||| | ||||||  ||||||||||| ||| |   |||||| ||||| | |||||||||||||    
T  17259351 ttgagcttatctactaacataagcacttgtgagacttgttgagtgagcttttggaaacaacttttgacatgaccatgagctgttctaagcttatttccat 17259252  T
Q  180 aagctctc 187  Q
    || |||||    
T  17259251 aaactctc 17259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 4619855 - 4619734
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||   |||||| |||||||||||| |||  | |||| ||||||||||||| | |||||||| |||| |  | ||| | ||| |||    
T  4619855 ttggattggcttatttgtgtttatttgctgacataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggttt 4619756  T
Q  166 cagcttatttccataagctctc 187  Q
    || |||||||||||||| ||||    
T  4619755 caccttatttccataagttctc 4619734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 38047804 - 38047881
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||||| ||| |||||||||| ||||   ||||| | ||||| ||||| ||||||||||||| |||||||||||||||    
T  38047804 gattggcttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatga 38047881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 31208620 - 31208500
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||||||||||| |  ||||||||||||||   ||||||||| ||||||||| | |   ||||||||||||  |  ||| | |||||||||    
T  31208620 ttggattgacttatttgaactgaactactgacataagcacccgtgagactgtttgggagagttcataaaaacaacttatgtaatgtccgtaaactgtttt 31208521  T
Q  166 cagcttatttccataagctct 186  Q
     ||||||||| ||||||||||    
T  31208520 tagcttattttcataagctct 31208500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 2880478 - 2880589
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggag-agcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    |||||||||||||| ||||||  |||| | | |||| |||| ||||||| |||||| ||||||| || ||||||  | ||| |  |||||||||||||||    
T  2880478 ttatttgaacttatctactgagctaagtactagtgaaactgtttgggaggagcttatggaaacagctaatgatatgttcataaggtgttttcagcttatt 2880577  T
Q  175 tccataagctct 186  Q
    ||||||| ||||    
T  2880578 tccataaactct 2880589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 8177454 - 8177593
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||||||||| |   | |||||||| |||  |||| | | || |||||| | ||||||| |||||||||  ||||| |  ||||||    
T  8177454 ttggattggcttatttgaacttatctttcggcataagcacttgatagaccgttcggaagagctcatggaaacagcttatgatatgtccataagttgtttt 8177553  T
Q  166 cagcttatttccataagctctcaagga-aggatagcttat 204  Q
    ||| |||||| ||||||||||| |||| || |||||||||    
T  8177554 caggttattttcataagctctccaggatagcatagcttat 8177593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 15015986 - 15015928
Alignment:
Q  71 ttggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 130  Q
    |||| |||||||| ||||| ||||||||||||| |||||||||||| |||||||| ||||    
T  15015986 ttggcttatttgagcttatctactgacataagc-tttgtgagactgtttgggagaactta 15015928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 6109576 - 6109510
Alignment:
Q  121 ggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||| ||||| || ||||||||  ||||| |  ||||||||||||||||||| ||||||||    
T  6109576 ggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctctc 6109510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 37526160 - 37526242
Alignment:
Q  105 tttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||| ||| ||||||||| | | ||||| ||||| |  |  || | |||||||||||||||||||||||||||||    
T  37526160 tttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctc 37526242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 37588321 - 37588403
Alignment:
Q  105 tttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||| ||| ||||||||| | | ||||| ||||| |  |  || | |||||||||||||||||||||||||||||    
T  37588321 tttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctc 37588403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 37690597 - 37690679
Alignment:
Q  105 tttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||||||||||| ||| ||||||||| | | ||||| ||||| |  |  || | |||||||||||||||||||||||||||||    
T  37690597 tttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctc 37690679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 42181019 - 42181077
Alignment:
Q  78 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaa 136  Q
    |||||||||||||||||  |||| |||||||||||||   ||||||||||||| |||||    
T  42181019 atttgaacttatttactagcatatgcatttgtgagacaatttgggagagcttatggaaa 42181077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 29336744 - 29336699
Alignment:
Q  100 aagcatttgtgagactggttgggagagcttaaggaaacaacttatg 145  Q
    ||||| ||||||||||| ||| ||||||||| ||||||||||||||    
T  29336744 aagcacttgtgagactgattgagagagcttatggaaacaacttatg 29336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 42500165 - 42500240
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactta 143  Q
    ||||||||||||||||| |||||  ||||||||||||  |||||||||||  || ||||| |||| ||||||||||||    
T  42500165 ttggattggtttatttggacttacctactgacataag-ttttgtgagact-ctttggagaacttatggaaacaactta 42500240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 7674795 - 7674716
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||| |||||||| ||||| |||  || ||||  |||||||||||| |||| ||| |||| |||||||||||||||    
T  7674795 ttggattggcttatttgagcttatctacctacttaagt-tttgtgagactgcttggaagaacttatggaaacaacttatga 7674716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 11700332 - 11700420
Alignment:
Q  98 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||||| ||||||||||  |  |||||| ||| ||||||||||||||| |  ||||| | |||||||||| |||||| ||||| ||||    
T  11700332 ataagcacttgtgagactattgaggagagtttatggaaacaacttatgacatgtccataagctgttttcagattattttcataaactct 11700420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 14599304 - 14599372
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    |||||||||||||||||||  ||||| || |||| ||| || ||| |||||||||  ||||||||||||    
T  14599304 ttatttgaacttatttactagcataaacacttgtaagattgtttgagagagcttatcgaaacaacttat 14599372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 32897545 - 32897485
Alignment:
Q  126 gcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||| |||||||||||||||||  | ||| | |||||||| |||||||| ||||||||||    
T  32897545 gcttatggaaacaacttatgatattttcataacctgttttctgcttattttcataagctct 32897485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 6950460 - 6950350
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||  |||| ||||| ||||| ||||||||||| || ||||||||||||| | ||||||| ||||| |  || || |  ||||||||||||||||    
T  6950460 ttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttattt 6950361  T
Q  176 ccataagctct 186  Q
    |||||||||||    
T  6950360 ccataagctct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 43368622 - 43368702
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||  |||||||| ||||| |||| |||||||||||||||||||||||||  | |||||| | |||||||||||||    
T  43368622 ttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatga 43368702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 14926904 - 14926967
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagctt 129  Q
    ||||||||  |||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||    
T  14926904 ttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 2487930 - 2488008
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||| ||||||||  | || |||||||||||||| ||||||||||| |||||||| |||| | |||||||||||    
T  2487930 ttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttat 2488008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 24326167 - 24326097
Alignment:
Q  78 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgata 148  Q
    |||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||| |||||||  ||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacagtttatgata 24326097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 7714390 - 7714269
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  |||||||| ||||| || || ||||| || ||||||||||| |||| | |||||  ||||||||||||||| |  || |||| |||||||    
T  7714390 ttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatgagctgtttt 7714291  T
Q  166 cagcttatttccataagctctc 187  Q
    || ||||||| ||| |||||||    
T  7714290 caacttattttcatgagctctc 7714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 8558768 - 8558687
Alignment:
Q  106 ttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    ||||||| ||| ||||||||||||| ||||||||||| ||| |  ||||| |||| ||||||| |||||| |||||||||||    
T  8558768 ttgtgaggctgtttgggagagcttatggaaacaacttgtgacatgtccatcaactattttcagattattttcataagctctc 8558687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 14949983 - 14949894
Alignment:
Q  97 cataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctct 186  Q
    ||||| |||||||||||||| || |||||||||| | ||| ||||||||| |  ||||| | |||||||||||||||||| |||| ||||    
T  14949983 cataaacatttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctct 14949894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 26410402 - 26410301
Alignment:
Q  92 actgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagc-ttatttccataagctctcaag 190  Q
    ||||||||||||| || |||||||| ||||||||||||| ||||||| || |||| |  ||||  | ||||||| ||| |||||||||||||||||| ||    
T  26410402 actgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataagctctccag 26410303  T
Q  191 ga 192  Q
    ||    
T  26410302 ga 26410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 30191073 - 30191178
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||  |||| || || |||||||| |||| |||||| ||||||||||||| ||||||||||||||| |  | ||  |  ||||||||||||||||    
T  30191073 ttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttattt 30191172  T
Q  176 ccataa 181  Q
    ||||||    
T  30191173 ccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 21130748 - 21130639
Alignment:
Q  78 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttcc 177  Q
    |||||| ||||| | |||||||||  | ||||||||||| ||| ||||||||| ||||| | ||| ||| |  ||||||  ||||||| |||||||||||    
T  21130748 atttgagcttatgtgctgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccatg--ctgttttgagcttatttcc 21130651  T
Q  178 ataagctctcaa 189  Q
    ||||||||||||    
T  21130650 ataagctctcaa 21130639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 2482982 - 2482895
Alignment:
Q  95 gacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataag 182  Q
    |||||||||  ||||||||||| |||||||| |||||| |||||||| | ||||  | ||| | |||||||||||||||||| |||||    
T  2482982 gacataagcccttgtgagactgtttgggagaacttaagaaaacaactcacgataagttcataagctgttttcagcttatttctataag 2482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 39551131 - 39551258
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||  ||||||||  |||| ||| || |||||||||||||| |||| ||||||||  ||| ||||||||||||||| |  ||||  | |||||||    
T  39551131 ttggattgacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttt 39551230  T
Q  166 cagcttatttccataagctctcaaggaa 193  Q
     | |||||||  |||||||||| |||||    
T  39551231 taacttatttttataagctctccaggaa 39551258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 4055585 - 4055659
Alignment:
Q  113 actggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctc 187  Q
    |||| ||||||||| |||  |||| ||||||||| |  ||||| ||||||||||||||||||||| |||||||||    
T  4055585 actgtttgggagagtttatagaaataacttatgacatgtccataaactgttttcagcttatttccttaagctctc 4055659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 11183691 - 11183572
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||||| |||||||| ||||| |||||||| ||||   || ||||||  | |  ||||||||   |||||||||||||||  || || | |||||||    
T  11183691 ttggattggcttatttgagcttatctactgacaaaagctcatgggagactcttag--agagcttataaaaacaacttatgatatgtctataagctgtttt 11183594  T
Q  166 cagcttatttccataagctctc 187  Q
    ||||||||||||||||||||||    
T  11183593 cagcttatttccataagctctc 11183572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 7918713 - 7918815
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    |||||| ||||||| ||||  ||||| || ||||||||||| ||||||||||||| | ||||||||||| |||        | |||||||||||||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttattata--------atctgttttcagcttattt 7918804  T
Q  176 ccataagctct 186  Q
    ||| |||||||    
T  7918805 ccacaagctct 7918815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 30013346 - 30013253
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccat 179  Q
    |||||||||| |||||||||||||||||||| ||  || |||||| ||||||| ||||| |    ||| | |||| ||||||||||||||||||    
T  30013346 ttatttactggcataagcatttgtgagactgtttttgaaagcttatggaaacatcttatcaagtgtccctaaactattttcagcttatttccat 30013253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 8535977 - 8536037
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagag 126  Q
    ||||||||| | ||||||| |||| |||||||||||| | ||||||||||| |||||||||    
T  8535977 ttggattggctaatttgaatttatctactgacataagtacttgtgagactgtttgggagag 8536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 41589731 - 41589657
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||||||||| ||| | ||||||||||||| ||| |||||||| || ||||| |||| | |||||||||||    
T  41589731 gattggtttatttgagcttgtctactgacataagc-tttttgagactgttttggagaacttatgaaaacaacttat 41589657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 6526199 - 6526253
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttata 58  Q
    ||||||||||| | ||| ||| | ||||||||||| |||||||||||||||||||    
T  6526199 tactggcataagcccttgtgagattgtttgagagaacttaggaaaacaacttata 6526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 30251376 - 30251453
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttat 144  Q
    ||||||||| |||||||| ||||| ||||||||||||  || ||||||||| |||||||| |||| | ||||| |||||    
T  30251376 ttggattggcttatttgagcttatctactgacataag-tttcgtgagactgtttgggagaacttacgaaaacagcttat 30251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7918728 - 7918781
Alignment:
Q  4 tactggcataaccacttctgacactgtttgagagagcttaggaaaacaacttat 57  Q
    |||| |||||| ||||| ||| |||||||| ||||||||| |||||||||||||    
T  7918728 tactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 13000371 - 13000464
Alignment:
Q  91 tactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagct 184  Q
    ||||| |||||||| ||||||||||  |||  |||| ||| || |||||||||||| |  ||||  |  |||||||||||||||||||||||||    
T  13000371 tactggcataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14926926 - 14926967
Alignment:
Q  1 atttactggcataaccacttctgacactgtttgagagagctt 42  Q
    |||||||||||||| ||||| ||| |||||||||||||||||    
T  14926926 atttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 31705140 - 31705107
Alignment:
Q  159 ctgttttcagcttatttccataagctctcaagga 192  Q
    ||||||||||||||||||||||| ||||||||||    
T  31705140 ctgttttcagcttatttccataaactctcaagga 31705107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 37740359 - 37740462
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggtt-gggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatt 174  Q
    ||||||||| |||| || |||| || | | |||||||| ||||| ||||||| ||| ||||||||||||||| |  ||||| |||| |||||||||||||    
T  37740359 ttatttgaatttatctattgacgtacgtagttgtgaga-tggttagggagagtttatggaaacaacttatgacatgtccat-aactattttcagcttatt 37740456  T
Q  175 tccata 180  Q
    ||||||    
T  37740457 tccata 37740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 778527 - 778487
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactg 116  Q
    ||||||| ||||||||||||| ||||||| |||||||||||    
T  778527 ttatttgtacttatttactgaaataagcacttgtgagactg 778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 2091911 - 2091791
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    |||||||| ||||||||| |||||  | || ||||| || |||||||| || ||| ||||||| |   |||||||||||||||  ||||| |  ||||||    
T  2091911 ttggattgatttatttgatcttatccaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgtttt 2091812  T
Q  166 cagcttatttccataagctct 186  Q
    || |||||||| ||| |||||    
T  2091811 caacttatttctatatgctct 2091791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 8806623 - 8806679
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttggg 122  Q
    |||||||| | |||||| |||||| ||||||||||| || |||| ||||||||||||    
T  8806623 ttggattgatgtatttgtacttatctactgacataaacacttgtaagactggttggg 8806679  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 11494448 - 11494340
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 175  Q
    ||||||||| |||||| |||||||||| | ||  ||||||| ||   |||| ||| ||||||||||||| |||| |  || ||||||||| || |||| |    
T  11494448 ttatttgaatttatttgctgacataagtacttccgagactgcttcaaagagtttatggaaacaacttataatacgtgtataaactgtttttagattatgt 11494349  T
Q  176 ccataagct 184  Q
    |||||||||    
T  11494348 ccataagct 11494340  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 11795147 - 11795119
Alignment:
Q  159 ctgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||    
T  11795147 ctgttttcagcttatttccataagctctc 11795119  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 12361342 - 12361219
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagag--cttaaggaaacaacttatgatacctccatgaactgtt 163  Q
    ||||||||  |||||||||||||| |||||| ||||| | |||| |||||  ||| |||||  ||||  |||| | ||||||| |  ||||| | |||||    
T  12361342 ttggattgacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgtt 12361243  T
Q  164 ttcagcttatttccataagctctc 187  Q
    |||| ||||||||||| |||||||    
T  12361242 ttcaacttatttccattagctctc 12361219  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 25881357 - 25881417
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    |||| |||||||||||| | ||||||||||| |||  ||||||||  ||||||||||||||    
T  25881357 ttatctactgacataagtacttgtgagactgtttgaaagagcttagagaaacaacttatga 25881417  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 33553388 - 33553268
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgtttt 165  Q
    ||||||| | |||||||| ||||| ||   ||||||||| ||||||  ||| |||| ||||||||  ||| |||||||||| |  ||| | | |||||      
T  33553388 ttggattagcttatttgagcttatctatcaacataagcacttgtgatgctgtttggaagagcttattgaagcaacttatgacatgtccctaagctgttcc 33553289  T
Q  166 cagcttatttccataagctct 186  Q
    |||||||||||||||||||||    
T  33553288 cagcttatttccataagctct 33553268  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 34788495 - 34788523
Alignment:
Q  196 atagcttatatggaaacagtttgacttta 224  Q
    |||||||||||||||||||||||||||||    
T  34788495 atagcttatatggaaacagtttgacttta 34788523  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 41606919 - 41606951
Alignment:
Q  160 tgttttcagcttatttccataagctctcaagga 192  Q
    |||||||||||||||||||||||||||| ||||    
T  41606919 tgttttcagcttatttccataagctctctagga 41606951  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 45071522 - 45071442
Alignment:
Q  66 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 146  Q
    ||||||||| |||| ||||||||| || ||||||||  | ||| ||| ||| || |||||||||| | |||||||||||||    
T  45071522 ttggattggcttatctgaacttatctaatgacataaaaaattgggaggctgtttcggagagcttatgaaaacaacttatga 45071442  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 10559 - 10654
Alignment:
Q  86 ttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataa 181  Q
    |||| |||||||||||| | ||||||||||| |||  | |||||| | |||||||| |||| |  ||||| |  ||||||||||||||||||||||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataa 10654  T

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Target: scaffold0159 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 187
Target Start/End: Complemental strand, 27058 - 27028
Alignment:
Q  157 aactgttttcagcttatttccataagctctc 187  Q
    |||||||||||||||||||||||||||||||    
T  27058 aactgttttcagcttatttccataagctctc 27028  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 9703 - 9777
Alignment:
Q  69 gattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaactta 143  Q
    ||||| |||||||||  |||| |||| ||||||  | ||||||||||| |||||||||| || ||||||||||||    
T  9703 gattgatttatttgagtttatctactaacataaatacttgtgagactgtttgggagagcctatggaaacaactta 9777  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 4155 - 4224
Alignment:
Q  76 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatg 145  Q
    |||||||| ||| | |||||||||||||| |||||||  || ||| ||||| ||| ||||||||||||||    
T  4155 ttatttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatg 4224  T

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Target: scaffold0428 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 4043 - 3983
Alignment:
Q  77 tatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaac 137  Q
    ||||||||||||| || ||| ||||||| ||||||||||| |||| |||| ||| ||||||    
T  4043 tatttgaacttatatattgatataagcacttgtgagactgtttggaagagtttatggaaac 3983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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