View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3777_low_1 (Length: 459)

Name: NF3777_low_1
Description: NF3777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3777_low_1
NF3777_low_1
[»] chr1 (49 HSPs)
chr1 (27-289)||(16147760-16148022)
chr1 (43-289)||(12059093-12059337)
chr1 (45-278)||(25404405-25404638)
chr1 (294-411)||(16145771-16145889)
chr1 (46-289)||(20448939-20449179)
chr1 (46-289)||(20534705-20534945)
chr1 (46-289)||(20498088-20498329)
chr1 (45-289)||(20860011-20860253)
chr1 (27-160)||(21240580-21240714)
chr1 (45-289)||(26194760-26195007)
chr1 (45-155)||(30818643-30818753)
chr1 (27-160)||(13798878-13799010)
chr1 (45-269)||(46142874-46143100)
chr1 (45-289)||(23299419-23299657)
chr1 (177-270)||(49056460-49056553)
chr1 (40-289)||(28763183-28763436)
chr1 (45-162)||(16384393-16384511)
chr1 (45-289)||(19874439-19874691)
chr1 (45-160)||(20898095-20898210)
chr1 (94-258)||(4028895-4029063)
chr1 (46-159)||(25727484-25727598)
chr1 (46-159)||(25735892-25736006)
chr1 (95-289)||(41462326-41462525)
chr1 (27-160)||(49055981-49056114)
chr1 (45-261)||(19787605-19787820)
chr1 (95-258)||(8654354-8654520)
chr1 (45-269)||(19771514-19771739)
chr1 (54-276)||(12059816-12060044)
chr1 (45-289)||(1593705-1593956)
chr1 (54-277)||(19879410-19879640)
chr1 (45-160)||(28208414-28208531)
chr1 (45-133)||(52754816-52754905)
chr1 (197-277)||(20394286-20394366)
chr1 (216-289)||(18817075-18817150)
chr1 (95-238)||(8952838-8952985)
chr1 (193-289)||(17717451-17717547)
chr1 (192-277)||(36849744-36849829)
chr1 (95-144)||(52235446-52235495)
chr1 (202-289)||(17987269-17987356)
chr1 (197-277)||(22825459-22825538)
chr1 (197-277)||(41308805-41308885)
chr1 (193-269)||(48257115-48257190)
chr1 (95-154)||(26133791-26133850)
chr1 (196-277)||(2394592-2394673)
chr1 (45-144)||(8649418-8649519)
chr1 (95-277)||(19599228-19599410)
chr1 (197-258)||(16364680-16364741)
chr1 (196-277)||(20400306-20400386)
chr1 (197-258)||(21453335-21453396)
[»] scaffold0001 (5 HSPs)
scaffold0001 (45-278)||(521282-521515)
scaffold0001 (46-291)||(81921-82164)
scaffold0001 (45-159)||(33406-33519)
scaffold0001 (45-159)||(38713-38826)
scaffold0001 (196-277)||(523416-523497)
[»] chr6 (83 HSPs)
chr6 (40-279)||(28733460-28733699)
chr6 (40-265)||(25030471-25030696)
chr6 (40-279)||(18627958-18628198)
chr6 (27-289)||(19612046-19612309)
chr6 (45-289)||(26822387-26822627)
chr6 (40-289)||(23509708-23509957)
chr6 (48-289)||(19695944-19696183)
chr6 (40-289)||(23523256-23523505)
chr6 (45-289)||(23346490-23346735)
chr6 (27-289)||(18993674-18993936)
chr6 (45-289)||(25922694-25922939)
chr6 (45-230)||(17793347-17793533)
chr6 (40-230)||(19994124-19994313)
chr6 (45-289)||(15470482-15470721)
chr6 (40-289)||(29254510-29254762)
chr6 (40-160)||(14893956-14894077)
chr6 (45-289)||(15172754-15172994)
chr6 (45-289)||(12659756-12660001)
chr6 (40-276)||(20217806-20218039)
chr6 (40-276)||(22111831-22112064)
chr6 (45-278)||(29094073-29094308)
chr6 (45-277)||(22738388-22738623)
chr6 (28-269)||(25338567-25338807)
chr6 (45-151)||(20464905-20465010)
chr6 (121-258)||(2647879-2648019)
chr6 (45-186)||(31964931-31965072)
chr6 (45-143)||(5399757-5399856)
chr6 (150-279)||(10916483-10916610)
chr6 (45-162)||(3924169-3924282)
chr6 (45-165)||(18974187-18974306)
chr6 (45-157)||(20225612-20225722)
chr6 (45-157)||(22119596-22119706)
chr6 (47-269)||(16470455-16470680)
chr6 (45-159)||(22600796-22600911)
chr6 (45-160)||(24392336-24392450)
chr6 (54-289)||(29360854-29361095)
chr6 (40-162)||(24545065-24545185)
chr6 (45-289)||(28079805-28080056)
chr6 (45-276)||(8604031-8604270)
chr6 (40-150)||(25508116-25508224)
chr6 (40-150)||(26018485-26018593)
chr6 (94-269)||(19614527-19614702)
chr6 (122-239)||(12992434-12992553)
chr6 (197-277)||(29597022-29597101)
chr6 (40-166)||(4741510-4741633)
chr6 (95-258)||(19560229-19560395)
chr6 (40-147)||(26139189-26139294)
chr6 (40-147)||(26157858-26157963)
chr6 (45-269)||(26474481-26474706)
chr6 (105-277)||(25785706-25785884)
chr6 (197-258)||(12443221-12443282)
chr6 (94-269)||(15507754-15507929)
chr6 (46-164)||(32545102-32545222)
chr6 (96-258)||(17120103-17120266)
chr6 (54-160)||(19569613-19569720)
chr6 (40-111)||(28720813-28720884)
chr6 (45-269)||(30670594-30670819)
chr6 (45-160)||(25949852-25949969)
chr6 (197-277)||(18007020-18007100)
chr6 (27-142)||(20435756-20435869)
chr6 (45-111)||(13216845-13216911)
chr6 (48-142)||(14991739-14991832)
chr6 (216-277)||(21573193-21573255)
chr6 (95-240)||(5670240-5670388)
chr6 (196-277)||(24860699-24860779)
chr6 (174-269)||(20465036-20465131)
chr6 (94-157)||(20221761-20221823)
chr6 (94-157)||(22115745-22115807)
chr6 (215-277)||(10712390-10712452)
chr6 (179-279)||(18974328-18974428)
chr6 (216-277)||(22781294-22781356)
chr6 (216-258)||(23296750-23296792)
chr6 (197-258)||(1626832-1626893)
chr6 (197-277)||(15842664-15842744)
chr6 (196-277)||(20164872-20164952)
chr6 (196-277)||(20171569-20171649)
chr6 (196-277)||(24854040-24854120)
chr6 (126-163)||(32796005-32796042)
chr6 (95-144)||(35243816-35243865)
chr6 (202-278)||(1176768-1176843)
chr6 (27-118)||(6795453-6795545)
chr6 (197-277)||(18107877-18107957)
chr6 (193-277)||(19569477-19569560)
[»] chr5 (36 HSPs)
chr5 (45-288)||(16677609-16677854)
chr5 (23-289)||(31414991-31415259)
chr5 (34-289)||(12411047-12411302)
chr5 (45-276)||(20738874-20739103)
chr5 (45-289)||(22171317-22171569)
chr5 (45-276)||(20724170-20724407)
chr5 (45-157)||(24166792-24166902)
chr5 (48-276)||(90375-90605)
chr5 (45-276)||(22949103-22949341)
chr5 (40-289)||(31757448-31757698)
chr5 (48-269)||(21382812-21383034)
chr5 (45-276)||(34222438-34222669)
chr5 (45-151)||(17408180-17408287)
chr5 (58-269)||(21390204-21390416)
chr5 (174-289)||(25485720-25485836)
chr5 (45-141)||(23114787-23114882)
chr5 (45-144)||(21999975-22000075)
chr5 (45-269)||(21833458-21833683)
chr5 (216-277)||(25742397-25742459)
chr5 (27-276)||(22942875-22943114)
chr5 (197-277)||(23626142-23626222)
chr5 (197-269)||(6406972-6407044)
chr5 (197-277)||(30758476-30758556)
chr5 (197-277)||(30768581-30768661)
chr5 (219-278)||(9728205-9728264)
chr5 (45-159)||(12322804-12322919)
chr5 (95-160)||(20167631-20167697)
chr5 (196-277)||(30730552-30730633)
chr5 (196-277)||(18610497-18610577)
chr5 (197-250)||(20246263-20246316)
chr5 (45-142)||(24165785-24165881)
chr5 (197-277)||(13910717-13910797)
chr5 (193-289)||(19890423-19890518)
chr5 (204-268)||(20915314-20915377)
chr5 (197-277)||(25114620-25114700)
chr5 (197-277)||(25173712-25173792)
[»] chr7 (68 HSPs)
chr7 (45-274)||(4541698-4541929)
chr7 (45-282)||(11483178-11483414)
chr7 (27-289)||(4255928-4256189)
chr7 (45-159)||(4982598-4982711)
chr7 (40-150)||(8837093-8837201)
chr7 (45-142)||(4460256-4460353)
chr7 (45-142)||(15523557-15523654)
chr7 (45-150)||(30063415-30063520)
chr7 (45-289)||(39271688-39271933)
chr7 (48-142)||(17912118-17912212)
chr7 (45-142)||(12348502-12348598)
chr7 (45-156)||(1614445-1614557)
chr7 (45-277)||(12199723-12199958)
chr7 (45-160)||(17205997-17206111)
chr7 (48-160)||(38877942-38878054)
chr7 (95-289)||(9257976-9258174)
chr7 (95-289)||(9312079-9312277)
chr7 (45-261)||(16896602-16896821)
chr7 (52-160)||(4465229-4465336)
chr7 (46-150)||(8779901-8780003)
chr7 (45-279)||(8521481-8521717)
chr7 (55-276)||(46274637-46274860)
chr7 (45-136)||(678972-679062)
chr7 (95-278)||(15205375-15205560)
chr7 (94-261)||(16487904-16488070)
chr7 (95-240)||(21507580-21507728)
chr7 (46-150)||(8786740-8786842)
chr7 (198-276)||(1614959-1615037)
chr7 (54-159)||(2325283-2325389)
chr7 (216-269)||(23292082-23292135)
chr7 (193-277)||(48804827-48804910)
chr7 (216-289)||(4295309-4295384)
chr7 (54-160)||(13435387-13435494)
chr7 (197-268)||(37099793-37099864)
chr7 (45-144)||(48713979-48714078)
chr7 (199-277)||(18274711-18274789)
chr7 (199-277)||(18288929-18289007)
chr7 (227-289)||(38878147-38878209)
chr7 (45-269)||(39389267-39389491)
chr7 (197-258)||(12736342-12736403)
chr7 (197-258)||(23293021-23293082)
chr7 (45-160)||(48804477-48804594)
chr7 (45-121)||(1464280-1464356)
chr7 (193-289)||(3375817-3375911)
chr7 (34-150)||(33610240-33610355)
chr7 (154-258)||(48800574-48800678)
chr7 (135-258)||(3210048-3210174)
chr7 (48-142)||(3375974-3376069)
chr7 (123-162)||(9562464-9562503)
chr7 (202-277)||(14582614-14582689)
chr7 (34-81)||(19514884-19514931)
chr7 (197-256)||(20114422-20114481)
chr7 (196-277)||(10838251-10838332)
chr7 (216-277)||(20627633-20627695)
chr7 (216-277)||(20631524-20631586)
chr7 (216-277)||(20636132-20636194)
chr7 (216-277)||(20638004-20638066)
chr7 (47-141)||(22245749-22245842)
chr7 (196-277)||(39388496-39388577)
chr7 (95-160)||(4313813-4313878)
chr7 (126-163)||(6711943-6711980)
chr7 (196-277)||(14753459-14753539)
chr7 (123-164)||(25033818-25033859)
chr7 (197-289)||(4465097-4465188)
chr7 (219-289)||(12388715-12388787)
chr7 (197-277)||(12576499-12576578)
chr7 (197-277)||(13652686-13652766)
chr7 (197-277)||(16759380-16759460)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-278)||(175433-175671)
[»] chr4 (36 HSPs)
chr4 (45-289)||(11921758-11922002)
chr4 (45-289)||(33330325-33330568)
chr4 (40-230)||(38652684-38652876)
chr4 (45-269)||(16953253-16953482)
chr4 (45-276)||(9192773-9193002)
chr4 (45-289)||(25190715-25190960)
chr4 (45-289)||(12345272-12345515)
chr4 (45-289)||(8561626-8561876)
chr4 (45-160)||(5676000-5676115)
chr4 (95-268)||(7197819-7197991)
chr4 (48-160)||(10731669-10731780)
chr4 (48-160)||(10945438-10945549)
chr4 (45-162)||(17169316-17169434)
chr4 (45-162)||(17174876-17174994)
chr4 (66-289)||(11325497-11325728)
chr4 (45-160)||(11902063-11902180)
chr4 (94-269)||(39042822-39042997)
chr4 (121-269)||(48642301-48642452)
chr4 (105-277)||(8091217-8091396)
chr4 (197-277)||(18242901-18242981)
chr4 (27-269)||(9857722-9857970)
chr4 (54-159)||(13622833-13622939)
chr4 (27-269)||(31594393-31594635)
chr4 (40-117)||(3771674-3771751)
chr4 (45-268)||(39071-39294)
chr4 (123-276)||(12807510-12807664)
chr4 (45-240)||(9945491-9945693)
chr4 (197-258)||(16227734-16227795)
chr4 (197-269)||(10559607-10559679)
chr4 (193-269)||(10731875-10731950)
chr4 (193-269)||(10945644-10945719)
chr4 (197-277)||(15305942-15306022)
chr4 (197-277)||(18984716-18984796)
chr4 (197-258)||(15866827-15866888)
chr4 (94-162)||(13882969-13883037)
chr4 (197-277)||(15258921-15259001)
[»] chr3 (66 HSPs)
chr3 (27-276)||(20224557-20224806)
chr3 (45-278)||(8532422-8532650)
chr3 (27-269)||(13418904-13419145)
chr3 (45-289)||(17775315-17775558)
chr3 (45-289)||(19076616-19076859)
chr3 (45-160)||(17023770-17023884)
chr3 (45-159)||(8685290-8685404)
chr3 (34-160)||(17051254-17051379)
chr3 (45-289)||(11848185-11848428)
chr3 (48-269)||(27407747-27407969)
chr3 (40-151)||(22039363-22039473)
chr3 (45-160)||(9774525-9774638)
chr3 (45-269)||(14347413-14347638)
chr3 (45-159)||(11577196-11577309)
chr3 (45-278)||(40847007-40847243)
chr3 (27-160)||(42243989-42244121)
chr3 (105-256)||(14071039-14071193)
chr3 (40-162)||(17210111-17210231)
chr3 (95-269)||(17389080-17389257)
chr3 (121-269)||(21264390-21264541)
chr3 (45-269)||(19566328-19566553)
chr3 (94-277)||(3213039-3213222)
chr3 (99-269)||(14137097-14137267)
chr3 (95-250)||(17766967-17767122)
chr3 (95-250)||(19068287-19068442)
chr3 (45-157)||(25055550-25055663)
chr3 (123-277)||(2006565-2006725)
chr3 (45-160)||(11826856-11826970)
chr3 (174-276)||(13605691-13605793)
chr3 (112-268)||(14605253-14605410)
chr3 (95-277)||(13326423-13326608)
chr3 (197-258)||(37977650-37977711)
chr3 (197-277)||(11940924-11941004)
chr3 (197-277)||(13135019-13135098)
chr3 (193-276)||(17051422-17051504)
chr3 (191-277)||(2722645-2722730)
chr3 (197-289)||(3338037-3338130)
chr3 (95-240)||(5688282-5688421)
chr3 (193-289)||(6237538-6237634)
chr3 (197-258)||(7630844-7630905)
chr3 (196-277)||(12192290-12192370)
chr3 (197-277)||(13141630-13141709)
chr3 (214-277)||(14444562-14444626)
chr3 (144-230)||(15494703-15494788)
chr3 (46-144)||(16034627-16034726)
chr3 (122-277)||(18128269-18128424)
chr3 (54-160)||(25765219-25765326)
chr3 (54-160)||(47975343-47975450)
chr3 (219-277)||(15233614-15233672)
chr3 (196-277)||(15572717-15572798)
chr3 (100-258)||(17481077-17481238)
chr3 (123-240)||(20149759-20149879)
chr3 (193-270)||(3244387-3244463)
chr3 (193-270)||(3249518-3249594)
chr3 (196-277)||(10141731-10141811)
chr3 (196-277)||(10148337-10148417)
chr3 (196-277)||(10158982-10159062)
chr3 (196-277)||(10165643-10165723)
chr3 (196-277)||(12198930-12199010)
chr3 (202-278)||(47975506-47975579)
chr3 (197-277)||(10545764-10545844)
chr3 (199-270)||(10850048-10850120)
chr3 (197-277)||(11869020-11869100)
chr3 (197-277)||(11948702-11948782)
chr3 (202-278)||(13202131-13202207)
chr3 (197-269)||(15947910-15947982)
[»] chr8 (50 HSPs)
chr8 (45-239)||(21319955-21320150)
chr8 (45-278)||(18008634-18008867)
chr8 (48-279)||(24342417-24342649)
chr8 (27-289)||(26854585-26854851)
chr8 (174-289)||(24059625-24059740)
chr8 (45-230)||(19791596-19791785)
chr8 (45-160)||(24220996-24221110)
chr8 (27-160)||(14161575-14161707)
chr8 (45-278)||(22285526-22285760)
chr8 (95-269)||(24035266-24035443)
chr8 (47-159)||(23456116-23456229)
chr8 (106-289)||(43835586-43835772)
chr8 (95-258)||(18229968-18230134)
chr8 (45-141)||(1989949-1990046)
chr8 (45-277)||(6569936-6570175)
chr8 (45-160)||(15760111-15760228)
chr8 (27-142)||(26013446-26013562)
chr8 (95-269)||(22818786-22818964)
chr8 (95-258)||(39730039-39730205)
chr8 (198-266)||(18263706-18263774)
chr8 (45-160)||(6280280-6280393)
chr8 (201-276)||(42417818-42417893)
chr8 (216-277)||(1301610-1301672)
chr8 (216-277)||(14821899-14821961)
chr8 (202-276)||(18162715-18162788)
chr8 (176-258)||(20264054-20264136)
chr8 (216-277)||(20453004-20453066)
chr8 (176-258)||(21050683-21050765)
chr8 (197-258)||(17503524-17503585)
chr8 (120-279)||(18959789-18959950)
chr8 (196-277)||(40951556-40951636)
chr8 (197-277)||(27538155-27538235)
chr8 (182-276)||(1989809-1989903)
chr8 (219-278)||(20394096-20394155)
chr8 (55-249)||(23880223-23880421)
chr8 (122-258)||(38349234-38349375)
chr8 (202-276)||(23694472-23694545)
chr8 (196-277)||(23904935-23905016)
chr8 (196-277)||(23912789-23912870)
chr8 (96-160)||(9318422-9318487)
chr8 (196-277)||(18821182-18821262)
chr8 (197-258)||(21328087-21328148)
chr8 (197-258)||(21950817-21950878)
chr8 (197-258)||(23503789-23503850)
chr8 (193-277)||(14877643-14877726)
chr8 (197-277)||(16417740-16417820)
chr8 (27-79)||(17515390-17515442)
chr8 (197-277)||(20713708-20713788)
chr8 (40-72)||(22725333-22725365)
chr8 (121-240)||(22831769-22831892)
[»] chr2 (58 HSPs)
chr2 (45-289)||(24609382-24609628)
chr2 (27-230)||(21131431-21131636)
chr2 (34-160)||(24365762-24365887)
chr2 (45-289)||(19012322-19012568)
chr2 (40-269)||(41652948-41653174)
chr2 (45-289)||(24322326-24322575)
chr2 (27-160)||(16440287-16440421)
chr2 (45-182)||(24370860-24370999)
chr2 (45-269)||(28496161-28496387)
chr2 (45-269)||(24177023-24177253)
chr2 (178-289)||(20661-20773)
chr2 (105-277)||(23797731-23797909)
chr2 (105-277)||(25803114-25803291)
chr2 (95-258)||(25038259-25038425)
chr2 (148-279)||(27074770-27074900)
chr2 (27-159)||(29576790-29576924)
chr2 (45-160)||(21343979-21344093)
chr2 (45-160)||(23704810-23704924)
chr2 (45-159)||(19121554-19121667)
chr2 (47-157)||(22558276-22558386)
chr2 (40-150)||(25858042-25858150)
chr2 (45-161)||(30948698-30948813)
chr2 (45-160)||(20851-20964)
chr2 (178-276)||(21343828-21343925)
chr2 (95-289)||(25369625-25369823)
chr2 (95-250)||(23013820-23013978)
chr2 (95-250)||(23017934-23018092)
chr2 (122-258)||(23649378-23649515)
chr2 (54-142)||(24507846-24507935)
chr2 (197-277)||(33182367-33182448)
chr2 (197-277)||(27767629-27767709)
chr2 (57-159)||(36684843-36684946)
chr2 (193-288)||(44998926-44999020)
chr2 (216-277)||(11317541-11317603)
chr2 (121-275)||(18993767-18993924)
chr2 (54-276)||(27745603-27745831)
chr2 (197-277)||(21201601-21201681)
chr2 (220-276)||(22438026-22438082)
chr2 (196-289)||(22043438-22043532)
chr2 (193-276)||(36684984-36685066)
chr2 (196-277)||(23158194-23158275)
chr2 (196-277)||(23569451-23569532)
chr2 (216-277)||(24172705-24172767)
chr2 (194-276)||(24507988-24508069)
chr2 (196-277)||(27616124-27616205)
chr2 (196-277)||(27632820-27632901)
chr2 (123-157)||(29952177-29952211)
chr2 (223-276)||(21872321-21872374)
chr2 (197-258)||(23634628-23634689)
chr2 (197-258)||(25143591-25143652)
chr2 (196-277)||(27622267-27622347)
chr2 (196-277)||(27628912-27628992)
chr2 (95-156)||(40916237-40916298)
chr2 (197-277)||(18446052-18446132)
chr2 (197-277)||(22872132-22872212)
chr2 (196-263)||(23162777-23162845)
chr2 (196-263)||(23574034-23574102)
chr2 (197-277)||(29585201-29585280)
[»] scaffold0123 (1 HSPs)
scaffold0123 (28-289)||(14596-14856)
[»] scaffold0074 (2 HSPs)
scaffold0074 (27-269)||(53569-53811)
scaffold0074 (45-289)||(22048-22295)
[»] scaffold0213 (1 HSPs)
scaffold0213 (45-288)||(22127-22360)
[»] scaffold1092 (1 HSPs)
scaffold1092 (45-276)||(1030-1262)
[»] scaffold1058 (1 HSPs)
scaffold1058 (45-276)||(2407-2639)
[»] scaffold0098 (2 HSPs)
scaffold0098 (27-164)||(4246-4383)
scaffold0098 (45-160)||(43750-43867)
[»] scaffold0443 (1 HSPs)
scaffold0443 (27-231)||(3833-4039)
[»] scaffold0855 (1 HSPs)
scaffold0855 (45-190)||(3998-4145)
[»] scaffold0847 (1 HSPs)
scaffold0847 (45-190)||(4163-4310)
[»] scaffold0021 (1 HSPs)
scaffold0021 (40-160)||(100733-100851)
[»] scaffold0362 (1 HSPs)
scaffold0362 (40-150)||(8675-8783)
[»] scaffold0049 (2 HSPs)
scaffold0049 (45-289)||(31647-31895)
scaffold0049 (94-269)||(13946-14121)
[»] scaffold0014 (1 HSPs)
scaffold0014 (48-279)||(168727-168960)
[»] scaffold0512 (1 HSPs)
scaffold0512 (122-258)||(6356-6496)
[»] scaffold0264 (1 HSPs)
scaffold0264 (40-141)||(21895-21995)
[»] scaffold0056 (1 HSPs)
scaffold0056 (95-289)||(69968-70166)
[»] scaffold0833 (1 HSPs)
scaffold0833 (197-277)||(73-153)
[»] scaffold0042 (2 HSPs)
scaffold0042 (125-258)||(55995-56131)
scaffold0042 (216-289)||(16727-16802)
[»] scaffold0009 (2 HSPs)
scaffold0009 (197-277)||(153177-153257)
scaffold0009 (197-258)||(149873-149934)
[»] scaffold0773 (1 HSPs)
scaffold0773 (45-142)||(1648-1746)
[»] scaffold0713 (1 HSPs)
scaffold0713 (45-147)||(6162-6262)
[»] scaffold0374 (1 HSPs)
scaffold0374 (216-277)||(11427-11489)
[»] scaffold0036 (2 HSPs)
scaffold0036 (45-142)||(110962-111060)
scaffold0036 (217-276)||(110864-110923)
[»] scaffold0853 (1 HSPs)
scaffold0853 (197-277)||(2817-2897)
[»] scaffold0169 (1 HSPs)
scaffold0169 (197-277)||(34852-34932)
[»] scaffold0078 (2 HSPs)
scaffold0078 (197-277)||(31255-31335)
scaffold0078 (197-277)||(25185-25265)
[»] scaffold0059 (1 HSPs)
scaffold0059 (95-269)||(13652-13828)
[»] scaffold0637 (1 HSPs)
scaffold0637 (95-258)||(2168-2334)
[»] scaffold0012 (1 HSPs)
scaffold0012 (219-278)||(186918-186977)
[»] scaffold0647 (1 HSPs)
scaffold0647 (216-277)||(3470-3532)
[»] scaffold0346 (1 HSPs)
scaffold0346 (219-277)||(18630-18688)
[»] scaffold0291 (1 HSPs)
scaffold0291 (219-277)||(261-319)
[»] scaffold0278 (2 HSPs)
scaffold0278 (216-266)||(11877-11927)
scaffold0278 (197-277)||(143-223)
[»] scaffold0165 (1 HSPs)
scaffold0165 (216-277)||(19566-19628)
[»] scaffold0150 (3 HSPs)
scaffold0150 (216-277)||(20080-20142)
scaffold0150 (216-277)||(26909-26971)
scaffold0150 (197-263)||(7760-7826)
[»] scaffold0076 (1 HSPs)
scaffold0076 (216-277)||(23864-23926)
[»] scaffold0031 (3 HSPs)
scaffold0031 (45-154)||(78382-78492)
scaffold0031 (197-269)||(24517-24589)
scaffold0031 (27-79)||(100923-100975)
[»] scaffold0016 (2 HSPs)
scaffold0016 (216-277)||(168669-168731)
scaffold0016 (197-277)||(187783-187863)
[»] scaffold1124 (1 HSPs)
scaffold1124 (197-258)||(844-905)
[»] scaffold0258 (1 HSPs)
scaffold0258 (197-258)||(21003-21064)
[»] scaffold0197 (1 HSPs)
scaffold0197 (45-141)||(8287-8384)
[»] scaffold0192 (1 HSPs)
scaffold0192 (197-289)||(32203-32296)
[»] scaffold0243 (1 HSPs)
scaffold0243 (197-269)||(53-125)
[»] scaffold0126 (1 HSPs)
scaffold0126 (197-277)||(11701-11781)
[»] scaffold0064 (1 HSPs)
scaffold0064 (202-289)||(49503-49590)
[»] scaffold0003 (1 HSPs)
scaffold0003 (197-261)||(79587-79651)
[»] scaffold0175 (1 HSPs)
scaffold0175 (193-276)||(11924-12006)
[»] scaffold0142 (2 HSPs)
scaffold0142 (193-276)||(24564-24646)
scaffold0142 (196-277)||(7163-7244)
[»] scaffold0116 (1 HSPs)
scaffold0116 (216-289)||(34793-34868)
[»] scaffold0037 (1 HSPs)
scaffold0037 (216-289)||(83560-83635)
[»] scaffold0747 (1 HSPs)
scaffold0747 (196-277)||(16-97)
[»] scaffold0241 (1 HSPs)
scaffold0241 (216-277)||(5614-5676)
[»] scaffold0132 (1 HSPs)
scaffold0132 (196-277)||(40644-40725)
[»] scaffold0060 (1 HSPs)
scaffold0060 (216-277)||(74669-74731)
[»] scaffold0046 (1 HSPs)
scaffold0046 (216-277)||(3021-3083)
[»] scaffold0861 (1 HSPs)
scaffold0861 (197-250)||(2085-2138)
[»] scaffold0504 (1 HSPs)
scaffold0504 (196-277)||(5-85)
[»] scaffold0375 (1 HSPs)
scaffold0375 (203-276)||(14137-14209)
[»] scaffold0364 (1 HSPs)
scaffold0364 (197-289)||(3900-3993)
[»] scaffold0916 (1 HSPs)
scaffold0916 (95-143)||(4116-4164)
[»] scaffold0574 (1 HSPs)
scaffold0574 (197-277)||(350-430)
[»] scaffold0190 (1 HSPs)
scaffold0190 (197-277)||(22079-22159)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-122; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 27 - 289
Target Start/End: Complemental strand, 16148022 - 16147760
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  16148022 gagatgcgatatacttaagagaaacttgtctttagaaagtagatccaacataaagttctagctttagggtttggtttatgaagggtttgtcaccaagatg 16147923  T
Q  127 aaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattg 226  Q
    ||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16147922 aaccaataatctcaaggcgttttttattattacttttaaaccgttttaaatcccaacttttcaactaaactctcttctaatcattcataaaagttaattg 16147823  T
Q  227 aattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16147822 aattaaacaactccatgttggaacgatactctcttattactacatcggtaaactgtacacttg 16147760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 43 - 289
Target Start/End: Complemental strand, 12059337 - 12059093
Alignment:
Q  43 aggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||| | |||||  |||||||||| || |||||||||||||||||    
T  12059337 aggagaaacatgtctttagaaagtaggtccaacataaagttctaggtttagggtttggtctgtgaagaatttgtcaccatgacgaaccaataatcccaag 12059238  T
Q  143 acgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
     |||||||||||||| |||||||||||||  ||||| ||||||||||| | |||| |||||||||||| ||||||||||||||||||| ||||||||| |    
T  12059237 gcgctttttattattgtttttaaaccgttaaaaatctcaacttttcaactgaactttcttctaatcatccataaaagttaattgaattcaacaactccct 12059138  T
Q  243 gttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    || ||||| |||  | |||||||||||| |||||||| || ||||||    
T  12059137 gtcggaacgata--cacttattactacaccggtaaaccgtgcacttg 12059093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 45 - 278
Target Start/End: Complemental strand, 25404638 - 25404405
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||| |||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| ||||| |||| || ||||||||||||||||| |    
T  25404638 gagaaacttgtatttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtaaccatgacgaaccaataatcccaaggc 25404539  T
Q  145 gctttttattattatt-tttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    || |||||| |||||| ||| |||||||  |||||| |||||||||| | |||| ||||||||||||   ||||||||||||||||| ||||||||| |     
T  25404538 gc-ttttataattattattttaaccgttaaaaatccaaacttttcaactgaactttcttctaatcatcactaaaagttaattgaattcaacaactccctc 25404440  T
Q  244 ttggaacaatactctcttattactacatcggtaaa 278  Q
    | ||||| ||||||| |||||||||||||||||||    
T  25404439 tcggaacgatactcttttattactacatcggtaaa 25404405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 294 - 411
Target Start/End: Complemental strand, 16145889 - 16145771
Alignment:
Q  294 atggtagaaaattcgaaatacagtcagtagaacatgaaaattcaaagtgattaaaacccaattcc-tttggtggtttttgctttactttcatcatcaatg 392  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16145889 atggtggaaaattcgaaatacagtcagtagaacatgaaaattcaaagtgattaaaacccaattccttttggtggtttttcctttactttcatcatcaatg 16145790  T
Q  393 atcaataaaaagaaaaacc 411  Q
    |||||||||||||||||||    
T  16145789 atcaataaaaagaaaaacc 16145771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 46 - 289
Target Start/End: Original strand, 20448939 - 20449179
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    ||||||| ||||||||||| ||||||||||||||| |||||  ||| ||||||||||| |||||| |||||||||| || ||||||||||| ||||| ||    
T  20448939 agaaactcgtctttagaaaataggtccaacataaagttctacgtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataataccaaggcg 20449038  T
Q  146 ctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    ||||||||||||| |||| ||||| || |||||| |||||||||| || ||||||||||||||||||  ||||||| |||||||||  | |||||| |||    
T  20449039 ctttttattatta-ttttcaaccg-ttaaaatcctaacttttcaacttgaactctcttctaatcattgttaaaagtcaattgaatt-cataactccctgt 20449135  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||| ||||||| |||||||||| |||||||||||| ||||||    
T  20449136 cggaacgatactct-ttattactacttcggtaaactgtgcacttg 20449179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 46 - 289
Target Start/End: Original strand, 20534705 - 20534945
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    ||||||| ||||||||||| ||||||||||||||| |||||  ||| ||||||||||| |||||| |||||||||| || ||||||||||| ||||| ||    
T  20534705 agaaactcgtctttagaaaataggtccaacataaagttctacgtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataataccaaggcg 20534804  T
Q  146 ctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    ||||||||||||| |||| ||||| || |||||| |||||||||| || ||||||||||||||||||  ||||||| |||||||||  | |||||| |||    
T  20534805 ctttttattatta-ttttcaaccg-ttaaaatcctaacttttcaacttgaactctcttctaatcattgttaaaagtcaattgaatt-cataactccctgt 20534901  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||| ||||||| |||||||||| |||||||||||| ||||||    
T  20534902 cggaacgatactct-ttattactacttcggtaaactgtgcacttg 20534945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 46 - 289
Target Start/End: Original strand, 20498088 - 20498329
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    ||||||| ||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||||| || |||||||||||||||||  |    
T  20498088 agaaactcgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgaagaaccaataatcccaaggtg 20498187  T
Q  146 ctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    ||||||||||||| |||| ||||| |  |||||| |||||||||| || ||||||||||||||||||  ||||||| |||| ||||  | || ||  |||    
T  20498188 ctttttattatta-ttttcaaccgctaaaaatcctaacttttcaacttgaactctcttctaatcattgttaaaagtcaattaaatt-cataagtcactgt 20498285  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||| ||||||| |||||||||| ||||||||| || ||||||    
T  20498286 tggaacgatactct-ttattactacttcggtaaaccgtgcacttg 20498329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 20860253 - 20860011
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| |||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||| |  | ||||||||||||||||| |    
T  20860253 gagaaacttctctttagaaaataggtccaacataaagttctagatttagggtttggtttgtgaaggatttgtcactatcacgaaccaataatcccaaggc 20860154  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    ||||||||||| ||||||    |||||  ||||||||||||||||| || ||||||||||||||||||  ||||| | |||||||||  | |||||| ||    
T  20860153 gctttttattactattttctg-ccgttaaaaatcccaacttttcaacttgaactctcttctaatcattgttaaaactcaattgaatt-cataactccctg 20860056  T
Q  244 ttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | | ||| ||| ||| |||||||||| ||||||||| || ||||||    
T  20860055 tcgaaacgatagtct-ttattactacttcggtaaaccgtgcacttg 20860011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 21240580 - 21240714
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||| ||||||||||||| || ||| ||| || |||||||| ||||| |||||||| |||||||    
T  21240580 gagatgtgataggcttaagagaaacttgtctttagaaagtgggtccaacataaagttttaggtttaggatttggtttgtgaagagtttgtcatcaagatg 21240679  T
Q  127 aaccaataatcccaagacg-ctttttattattatt 160  Q
    |||||||||||||||| || |||||||||||||||    
T  21240680 aaccaataatcccaaggcgcctttttattattatt 21240714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 26194760 - 26195007
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||| ||| ||||||||||||||  |||||| ||| ||||||||||| |||||| ||||||||||||||||| |||||| | |||  |    
T  26194760 gagaaacttgtctttataaaataggtccaacataaggttctaggtttagggtttggtttctgaaggatttgtcaccaagatgaatcaataacctcaatgc 26194859  T
Q  145 gctttttattattatttttaaaccgtt----ttaaatcccaacttttca-attaaactctcttctaatcattcataaaagttaattgaattaaacaactc 239  Q
    || ||||||||||||| |||     ||      |||||| |||||||||  |||||||||||||||||||||  ||||| ||||||||| |  | |||||    
T  26194860 gc-ttttattattattgttattttcttaaaacaaaatccaaacttttcagcttaaactctcttctaatcattgttaaaatttaattgaact-cataactc 26194957  T
Q  240 catgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | ||||||||| ||| ||| |||||||||||||||||||| || ||||||    
T  26194958 cctgttggaacgataatcttttattactacatcggtaaaccgtgcacttg 26195007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 30818753 - 30818643
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||| ||| ||||||||||| |||| | |||||||||| ||||||||||||||||||||||    
T  30818753 gagaaaattgtctttagaaaataggttcaacataaagttctaggtttagggtttggtttgtgaatgatttgtcaccatgatgaaccaataatcccaagac 30818654  T
Q  145 gctttttatta 155  Q
    | |||||||||    
T  30818653 gttttttatta 30818643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 13799010 - 13798878
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||| |||||||||||| ||| |||||    
T  13799010 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtccaacataaagttctaggtttaggatttggtttgtgaagggtttgtaacc-agatg 13798912  T
Q  127 aaccaat-aatcccaagacgctttttattattatt 160  Q
    ||||||| ||||||||  ||| |||||||||||||    
T  13798911 aaccaataaatcccaatgcgc-ttttattattatt 13798878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 46143100 - 46142874
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||| ||||||| |||||| |||||||  || ||| |||   |||||||||| |||| | |||||| ||| |||| |||||||||||||||     
T  46143100 gagaaacttgtccttagaaattaggtctaacataaggttttaggtttaatggtttggtttgtgaaagatttgtcgccatgatggaccaataatcccaagg 46143001  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaat-taaactctcttctaatcattca-taaaagttaattgaattaaacaactcc 240  Q
    | || ||||||||||||||| || |||||  ||| ||||||||| |||| | |||||||| ||||||||||| | | |||||||||||||||||||||||    
T  46143000 ctctcttttattattattttcaa-ccgttaaaaaccccaactttgcaatctgaactctct-ctaatcattcaattagagttaattgaattaaacaactcc 46142903  T
Q  241 atgttggaacaatactctcttattactac 269  Q
     ||| ||||| ||||||| || |||||||    
T  46142902 gtgtcggaacgatactctttttttactac 46142874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 23299419 - 23299657
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||| |||||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| || |||||||||||||          
T  23299419 gagaaacttgtctctagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcc------ 23299512  T
Q  145 gctttttattattatttttaaaccgtt--ttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
      || ||||||||| ||||||||||||    |||||| |||||||||| || ||||||||||||||||||  |||| ||||||| ||||  | | |||      
T  23299513 -tttattattatta-ttttaaaccgttaaaaaaatccaaacttttcaacttgaactctcttctaatcattgttaaaggttaattaaatt-catagctctc 23299609  T
Q  242 tgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||| ||||| ||||||  |||||||||| ||||||||| || ||||||    
T  23299610 tgtcggaacgatactcatttattactacttcggtaaaccgtgcacttg 23299657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 49056460 - 49056553
Alignment:
Q  177 tcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactaca 270  Q
    |||||||||||||| || |||  ||||||| ||||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  49056460 tcccaacttttcaactatacttccttctaaacattcgtaaaagttaattaaattaaacaactccttgttggaacgatactctcttattactaca 49056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 289
Target Start/End: Complemental strand, 28763436 - 28763183
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataa-tcc 138  Q
    |||| |||||||||||||||||||||||  ||||| |||||||| | | ||| ||||||| ||| ||||||| |||| |   |||||||||||||| |||    
T  28763436 cttatgagaaacttgtctttagaaagtaaatccaatataaaattatgg-tttagggtttg-tttgtgaagggcttgttatttagatgaaccaataaatcc 28763339  T
Q  139 caagacgctttttatta-ttatt--tttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaaca 235  Q
    |||| |||||||||||| || ||  |||||| |  |  |||||| |||||| ||| | |||| |  ||||||||  |||||||||| |||||||||||||    
T  28763338 caaggcgctttttattaattgttattttaaatctctaaaaatccaaactttgcaactgaacttttctctaatcacccataaaagttgattgaattaaaca 28763239  T
Q  236 actccatgttggaacaatactctc--ttattactacatcggtaaactgtacacttg 289  Q
    ||||| ||| ||||| ||||||||  |||||||||| ||| ||||| || ||||||    
T  28763238 actccctgtcggaacgatactctcctttattactacttcgataaaccgtgcacttg 28763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 16384511 - 16384393
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| | ||||||||| |||||| |||||  ||| || ||||||||||||||||| |    
T  16384511 gagaaacttgtctttagaaa-taggtccaacataaggttctagatttagagtttggtttgtgaaggatttgttgccatgacgaaccaataatcccaaggc 16384413  T
Q  145 gcttt--ttattattatttt 162  Q
    |||||  |||||||||||||    
T  16384412 gcttttattattattatttt 16384393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 19874691 - 19874439
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||  ||||||||||| |||||| |||||||| |||||| |||  ||||| ||||| |||||  ||||||   | ||||||||||||||||||||     
T  19874691 gagaaaccggtctttagaaattaggtctaacataaagttctaggtttgaggttttggtttgtgaagaatttgtcgttatgatgaaccaataatcccaagg 19874592  T
Q  144 cgctttttattatta-----tttttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | |||||||||||||     | ||| ||||||||  ||| ||||||||| ||| | || ||||||||||||||  |  ||||||||||||||| ||||||    
T  19874591 ctctttttattattatattttctttcaaccgtttgaaaaacccaactttgcaacttaattctcttctaatcatcaactaaagttaattgaattgaacaac 19874492  T
Q  238 tccatgttggaacaatactctcttattactacatcggtaa-actgtacacttg 289  Q
    ||| | |  |||| ||||||| || ||||||| ||||||| ||||| ||||||    
T  19874491 tccctatcagaacgatactctatttttactacttcggtaagactgtgcacttg 19874439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 20898210 - 20898095
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| || ||||| |||||  |||||| ||| |||||||||||  ||| | |||||||||| || ||||||||||| ||||| |    
T  20898210 gagaaacttgtctttagaaaatacgtccaccataaggttctaggtttagggtttggtttgggaatgatttgtcaccatgacgaaccaataattccaaggc 20898111  T
Q  145 gctttttattattatt 160  Q
    |||| |||||||||||    
T  20898110 gcttattattattatt 20898095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 258
Target Start/End: Original strand, 4028895 - 4029063
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat--tattatttttaaaccgtttt--aaatcccaacttttca 189  Q
    ||||||||||  |||||  ||||||  ||| |||||||||||||||||| | ||||||||  |||||| ||| |||| ||||  ||| ||||||||| ||    
T  4028895 ggtttggtttgagaaggacttgtcattaaggtgaaccaataatcccaagcctctttttatattattatctttcaacccttttgaaaaccccaactttgca 4028994  T
Q  190 attaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    | |  | ||||||||||||||  | |||||||||||||||| ||||||||||||| ||||| |||||||    
T  4028995 acttgattctcttctaatcatcaacaaaagttaattgaatttaacaactccatgtcggaacgatactct 4029063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 25727484 - 25727598
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||| |||||| |||||||| |||||| |||   |||| ||||| |||||| |||||||  | |||||||||||||||||||| |    
T  25727484 agaaacttgtctttagaaattaggtctaacataaagttctaggtttaaagttttggtttgtgaaggatttgtcattatgatgaaccaataatcccaaggc 25727583  T
Q  145 gctttttattattat 159  Q
     ||||||||||||||    
T  25727584 tctttttattattat 25727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 25735892 - 25736006
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||| |||||| |||||||| |||||| |||   |||| ||||| |||||| |||||||  | |||||||||||||||||||| |    
T  25735892 agaaacttgtctttagaaattaggtctaacataaagttctaggtttaaagttttggtttgtgaaggatttgtcattatgatgaaccaataatcccaaggc 25735991  T
Q  145 gctttttattattat 159  Q
     ||||||||||||||    
T  25735992 tctttttattattat 25736006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 41462326 - 41462525
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat--tattatttttaaaccgttt-taaatcccaacttttcaat 191  Q
    ||||| ||| |||||| |||||||||| || | |||||| |||||||| | ||||||||  |||||| ||| ||||||||  ||| ||||||||| |||     
T  41462326 gtttgatttgtgaaggatttgtcaccacgacggaccaatgatcccaaggctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 41462425  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaac-aactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    | || | ||||||||||||  || ||||||||| ||||||||| |||||| ||| ||||| |||||||||| ||||||| ||| || ||| |||||||||    
T  41462426 ttaattttcttctaatcatcaattaaagttaatcgaattaaacaaactccctgtcggaacgatactctctttttactacttcgatagaaccgtacacttg 41462525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 49055981 - 49056114
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||||| |||||||||||||||||||| ||||| || ||| ||| ||||||| ||| |||||||||||||| | |||||    
T  49055981 gagatgtgataggcttaagagaaacttatctttagaaagtaggtccaatataaagttttaggtttagggtttgatttgtgaagggtttgtcatc-agatg 49056079  T
Q  127 aaccaataatcccaagacg-ctttttattattatt 160  Q
    ||||||    |||||| || |||||||||||||||    
T  49056080 aaccaaggtacccaaggcgcctttttattattatt 49056114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 261
Target Start/End: Complemental strand, 19787820 - 19787605
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||||| ||  ||||||| ||||||||     
T  19787820 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcaccatgacaaaccaatgatcccaagg 19787721  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||| ||||||| | || |||||  ||| | ||||||| ||| || ||||||||   ||||||  |  |||||||||||||||||||||||||     
T  19787720 ctctcttttactattattctcaa-ccgttaaaaacctcaactttgcaaattgaactctct---aatcatcaactaaagttaattgaattaaacaactcct 19787625  T
Q  242 tgttggaacaatactctctt 261  Q
    ||| ||||| ||||||||||    
T  19787624 tgtcggaacgatactctctt 19787605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 258
Target Start/End: Original strand, 8654354 - 8654520
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||||||  |||||  ||||||  ||||||||||||| |||||||  | |||||||||||  ||| ||| |||||||| ||| ||| |||||| |||     
T  8654354 gtttggtttgagaaggacttgtcattaagatgaaccaatgatcccaatgctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 8654453  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |  | ||||||||||||||  | |||||| ||||||||| ||||||||||||| ||||| |||||||    
T  8654454 ttgattctcttctaatcatcaacaaaagtcaattgaatttaacaactccatgtcggaacgatactct 8654520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 19771739 - 19771514
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  || ||| |||    ||||||||| ||||||||||||||||| || |||||||| ||||||||     
T  19771739 gagaaacttgtctttagaagttaggtctaacataatgttataggtttaatagtttggtttgtgaagggtttgtcaccatgacgaaccaatgatcccaagg 19771640  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttc-aattaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||| ||||| || | |||| ||  ||| ||||||||| | |||| ||||||| |||||||||  |  |||||||||||||||||||||||||     
T  19771639 ctctcttttactatta-ttctcaacctttaaaaaccccaactttgcaaattgaactctc-tctaatcatcaactaaagttaattgaattaaacaactccc 19771542  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    | | | ||| ||||| |||| |||||||    
T  19771541 tatcgaaacgatactatctttttactac 19771514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 276
Target Start/End: Complemental strand, 12060044 - 12059816
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||  |||||| |||  ||||| ||||| |||||| ||||||   | ||||||||||||||| | |||| |||||||    
T  12060044 gtctttagaaattaggtctaacataaggttctaggtttaaggttttggtttgtgaaggatttgtcgttatgatgaaccaataatctcgagactcttttta 12059945  T
Q  153 ttattattttt------aaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttg 246  Q
    ||||||| |||      || |  ||  ||| ||||||||| ||| | ||| |||||||||||||  |  |||||||||| |||| ||||||||| ||| |    
T  12059944 ttattatattttctttcaaccaattgaaaaccccaactttgcaacttaac-ctcttctaatcatcaactaaagttaatttaattgaacaactccctgtcg 12059846  T
Q  247 gaacaatactctcttattactacatcggta 276  Q
    |||| |||||||||| ||||||| ||||||    
T  12059845 gaacgatactctctttttactacttcggta 12059816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 1593705 - 1593956
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||  ||||||||||| |||||  |||||||| || ||| |||  ||||| ||||| |||||| ||||||   | |||||||||||||||||||||    
T  1593705 gagaaaccggtctttagaaattaggtttaacataaagttttaggtttaaggttttggtttgtgaaggatttgtcgttatgatgaaccaataatcccaaga 1593804  T
Q  144 cgctttttattattat------ttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | ||||||||||||||      ||| || |  ||  ||| ||||||||| ||| | || ||||||||||||||  |  || |||||||||||| ||||||    
T  1593805 ctctttttattattatattttctttcaaccaattgaaaaccccaactttgcaacttaa-tctcttctaatcatcaactaaggttaattgaattgaacaac 1593903  T
Q  238 tccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    ||| ||| | ||| ||||||| || ||||||| |||||| ||| |||||||||    
T  1593904 tccttgtcgaaacgatactctatttttactacttcggtagaaccgtacacttg 1593956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 19879640 - 19879410
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||| || ||| |||  ||||| ||||| |||||| ||| ||   | |||||||||||||||| ||| | |||||||    
T  19879640 gtctttagaaattaggtctaacataaagttataggtttgaggttttggtttgtgaaggatttatcgttatgatgaaccaataatccaaaggctcttttta 19879541  T
Q  153 ttatta-----tttttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttg 246  Q
    ||||||     | ||| ||||||||  ||| ||||||||| ||| | || ||||||||||||||  |  ||| ||||||||||| ||||||||  ||| |    
T  19879540 ttattatatattctttcaaccgtttgaaaaccccaactttgcaacttaattctcttctaatcatcaactaaatttaattgaattgaacaactctctgtcg 19879441  T
Q  247 gaacaatactctcttattactacatcggtaa 277  Q
     ||| ||||||| || ||||||| |||||||    
T  19879440 aaacgatactctatttttactacttcggtaa 19879410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 28208414 - 28208531
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattcta-gctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||| ||||| | ||   ||||||||||  ||||| ||||||| || || |||||||||||| ||||     
T  28208414 gagaaacttgtctttagaaattaggtctaacataaagttctaggattaaaggtttggtttgagaaggatttgtcatcatgacgaaccaataatctcaagg 28208513  T
Q  144 c-gctttttattattatt 160  Q
    |  |||||||||||||||    
T  28208514 cacctttttattattatt 28208531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 52754905 - 52754816
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaat 133  Q
    |||||||||||||||||||  |||||| |||||||| |||||| |||  || |||||||| ||||||||||||||  | |||||||||||    
T  52754905 gagaaacttgtctttagaacttaggtctaacataaagttctaggtttaaggttttggtttgtgaagggtttgtcattatgatgaaccaat 52754816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 20394286 - 20394366
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||  |||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  20394286 tctcttctaatcatttctaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 20394366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 18817075 - 18817150
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| ||||||| || |||||||||    
T  18817075 aaagttaattgaattaaacaactccctgtaggaacgatactcttttcattactacttcggtaagaccgtacacttg 18817150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 8952985 - 8952838
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat--tattatttttaaaccgtttt--aaatcccaacttttcaa 190  Q
    |||||||||  |||||  ||||||  ||| ||||||||||||| |||| | ||||||||  |||||| ||| |||| ||||  ||| ||||||||| |||    
T  8952985 gtttggtttgagaaggacttgtcattaaggtgaaccaataatcacaaggctctttttatattattatctttgaacccttttgaaaaccccaactttgcaa 8952886  T
Q  191 ttaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
     |  | ||||||||||||||  | |||||||||||||||| |||||||    
T  8952885 ctttattctcttctaatcatcaacaaaagttaattgaatttaacaact 8952838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 17717451 - 17717547
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |||||||| ||||||||||  | |||||||||||||||  | |||||| ||| ||||| |||||||||| ||||||| |||||| |||||| ||||||    
T  17717451 aaactctcatctaatcattatttaaagttaattgaatt-cataactccttgtcggaacgatactctctttttactacttcggtagaactgtgcacttg 17717547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 36849829 - 36849744
Alignment:
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||||||  |  ||||||||||||||| ||||||| | |||  |||| ||||||| |||||||||| |||||||    
T  36849829 taaattctcttctaatcatcaactaaagttaattgaattgaacaacttcctgtcagaacgatactcttttattactacttcggtaa 36849744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 52235495 - 52235446
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| |||| | |||||||||| ||||||||||||||||||||||    
T  52235495 gtttggtttgtgaaagatttgtcaccatgatgaaccaataatcccaagac 52235446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 17987269 - 17987356
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    ||||||||||  ||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||||||||| ||||| ||| |||||||||    
T  17987269 tctaatcattattaaaagttaattgaattcat-aactccctgtcggaacgatactcttttattactacaccggtagaaccgtacacttg 17987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 22825459 - 22825538
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| ||||||| |||||||| ||||||||| ||||| ||||||| ||| |||||| |||||||    
T  22825459 tctcttctaatcatctctaaaggttaattaaattaaactactccatgtcggaacgatactctttta-tactacttcggtaa 22825538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 41308885 - 41308805
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| |||||||||  |||| ||||||| ||| |||||| |||||||    
T  41308885 tctcttctaatcattttcaaaggttaattgaattgaactactccatgtcagaacgatactcttttaatactacttcggtaa 41308805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 48257115 - 48257190
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||||| ||||||||||  | |||||||||||||||  | |||||||||| ||||| |||||||||| |||||||    
T  48257115 aaactctcatctaatcattatttaaagttaattgaatt-cataactccatgtcggaacgatactctctttttactac 48257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 26133850 - 26133791
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttatt 154  Q
    ||||||||| ||||||  ||||||   ||||||||||||||||||||||| |||||||||    
T  26133850 gtttggtttgtgaaggacttgtcaattagatgaaccaataatcccaagactctttttatt 26133791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 2394673 - 2394592
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  2394673 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 2394592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 8649418 - 8649519
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg--ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||  ||| || |||||||  |||||| |||    | |||||||| ||||||||||||||||| || | |||||| ||||||||    
T  8649418 gagaaacttgtctttagaagttagatctaacataaggttctaggtttaatagttttggtttgtgaagggtttgtcaccatgacggaccaatgatcccaag 8649517  T
Q  143 ac 144  Q
    ||    
T  8649518 ac 8649519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 277
Target Start/End: Complemental strand, 19599410 - 19599228
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaa 194  Q
    ||||||||| ||||||  ||||||   |||||||||||  |||||||| | | |||||||||||| ||| || || || ||| ||| |  || |||||      
T  19599410 gtttggtttgtgaaggacttgtcatttagatgaaccaacgatcccaaggctccttttattattatctttcaaacgcttaaaaaccccaacttacaattct 19599311  T
Q  195 actctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
      |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  19599310 tttctcctctaatcattttcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 19599228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 16364741 - 16364680
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||| |||| ||| || ||||||||||||||||| ||||||| ||| ||||| |||||||    
T  16364741 tctcttataataattgattaaagttaattgaattaaccaactccctgtcggaacgatactct 16364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 20400306 - 20400386
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  20400306 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 20400386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 21453396 - 21453335
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||||   ||| |||||||||||||||| ||||| ||| ||||| |||||||    
T  21453396 tctcttctaatcatttccaaaggttaattgaattaaactactccttgtcggaacgatactct 21453335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 158; Significance: 7e-84; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 521282 - 521515
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||||||||||||||||||| || ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |    
T  521282 gagaaacttgtctttagaaagtaggtccaacataaagttataggtttagggtttggtttgtgaagggtttgtcaccaagatgaaccaataatcccaaagc 521381  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||| |||    
T  521382 gctttttattattacttttaaaccgttaaaaatcccaacttttcaactgaacttccttctaatcattcataaaagttaattgaattaaacaactccctgt 521481  T
Q  245 tggaacaatactctcttattactacatcggtaaa 278  Q
    |||||| |||||||||| ||||||| ||| ||||    
T  521482 tggaacgatactctctttttactacttcgttaaa 521515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 46 - 291
Target Start/End: Complemental strand, 82164 - 81921
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  || ||||||| ||| |||| | ||||||| || || |||||||||||||||| |||    
T  82164 agaaacttgtctttagaaaataggtccaacataaagttctaggcttagggtttgatttgtgaaagatttgtcatcatgacgaaccaataatcccaatacg 82065  T
Q  146 ctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    | ||||||||||| |||| |||||||  |||||| |||||| ||| || |||||| |||||||||||  ||||||| |||||||||  | |||||| |||    
T  82064 c-ttttattatta-ttttcaaccgttaaaaatcctaactttccaacttgaactcttttctaatcattgttaaaagtcaattgaatt-cataactccctgt 81968  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttgag 291  Q
     ||||| ||||||| |||||||||| || |||||| || ||||||||    
T  81967 cggaacgatactcttttattactacttcagtaaaccgtgcacttgag 81921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 33406 - 33519
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||| |||| | |||||||||| || ||| |||||||| ||||      
T  33406 gagaaacttgtctttagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaagatttgtcaccatgacgaaacaataatctcaagga 33505  T
Q  145 gctttttattattat 159  Q
    | |||||||||||||    
T  33506 g-tttttattattat 33519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 38713 - 38826
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||| |||| | |||||||||| || ||| |||||||| ||||      
T  38713 gagaaacttgtctttagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaagatttgtcaccatgacgaaacaataatctcaagga 38812  T
Q  145 gctttttattattat 159  Q
    | |||||||||||||    
T  38813 g-tttttattattat 38826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 523416 - 523497
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  523416 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 523497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 6e-78; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 40 - 279
Target Start/End: Complemental strand, 28733699 - 28733460
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||| ||||||||||| ||||| |||||| || ||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28733699 cttaagagaaacttgtttttagaaagtaagtccatcataaagttataggtttagggtttggtttgtgaagggtttttcaccaagatgaaccaataatccc 28733600  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactc 239  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||| ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  28733599 aagacactttttattattacttttaaaccgttaaaaatcccaagttttcaactgaactttcttctaatcattcataaaagttaattgaattaaacaactc 28733500  T
Q  240 catgttggaacaatactctcttattactacatcggtaaac 279  Q
    | ||| ||||| |||||||||| ||||||| |||||||||    
T  28733499 cctgtcggaacgatactctctttttactacttcggtaaac 28733460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 40 - 265
Target Start/End: Complemental strand, 25030696 - 25030471
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||||||||||||||| ||||||| |||| |||||| ||| ||||||||||| ||||||||||||||| |||||  |||||||||||     
T  25030696 cttaagagaaacttgtctttagaaagtaagtccaacgtaaagttctaggtttagggtttggtttgtgaagggtttgtcactaagatagaccaataatcca 25030597  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactc 239  Q
    ||| ||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  25030596 aaggcgctttttattattacttttaaaccgttaaaaatcccaacttttcaactaaactctcttataatcattcttaaaagttaactgaattaaacaactc 25030497  T
Q  240 catgttggaacaatactctcttatta 265  Q
    ||||||||||| ||| ||||||||||    
T  25030496 catgttggaacgataatctcttatta 25030471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 40 - 279
Target Start/End: Original strand, 18627958 - 18628198
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||| ||||| ||||| |||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  18627958 cttaagagaaacttgtctttagaaagtagatccaatataaagttctaggtttagggtttggtttgtgaagggtttgtcatcaagatgaaccaataatccc 18628057  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    ||| || ||||||||||| |||||||||||||  | |||| | |||| ||| | ||||||| | ||||||||  ||||||||||||||||||||||||||    
T  18628058 aaggcgttttttattattctttttaaaccgttaaatatccaatctttacaactgaaactctttcctaatcatcaataaaagttaattgaattaaacaact 18628157  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaac 279  Q
    || ||||||||| |||||||||| ||||||| |||||||||    
T  18628158 ccctgttggaacgatactctctttttactacttcggtaaac 18628198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 27 - 289
Target Start/End: Complemental strand, 19612309 - 19612046
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||| |||||| ||||||| |||||||    
T  19612309 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtccaatataaagttctaggtttagggtttggtttgtgaaggttttgtcatcaagatg 19612210  T
Q  127 aaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaatt 225  Q
    |||||||||||||||| |||||||||||||| ||||| || || || ||||| ||||||| ||| | ||||||| ||||||||||  ||||||||||||     
T  19612209 aaccaataatcccaaggcgctttttattattcttttttaaacggttaaaatcacaactttgcaactgaaactcttttctaatcatcaataaaagttaatc 19612110  T
Q  226 gaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||| ||||||||  ||||||||| |||||||||| ||||||| ||||||||| || ||||||    
T  19612109 gaattgaacaactctctgttggaacgatactctctttttactacttcggtaaaccgtgcacttg 19612046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 26822387 - 26822627
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| || ||| |||  |||||||||| ||||||||||||||||| || ||||||||||||||||| |    
T  26822387 gagaaacttgtctttagaaaataggtccaacataaagttttaggtttaaggtttggtttgtgaagggtttgtcaccatgacgaaccaataatcccaaggc 26822486  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    |||||||||||||| |||||||||| |  |||||||||||||||||  ||||||| ||||||||||||||| | |||||||||||| || || |||||||    
T  26822487 gctttttattattacttttaaaccg-tcaaaatcccaacttttcaa--aaactcttttctaatcattcatagaggttaattgaattcaaaaattccatgt 26822583  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||| ||||||| ||||||||||| ||||||||||| ||||||    
T  26822584 cggaacgatactct-ttattactacaccggtaaactgtgcacttg 26822627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 40 - 289
Target Start/End: Complemental strand, 23509957 - 23509708
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||| || |||||||||||| | ||||||||| ||||||||||    
T  23509957 cttaagagaaacttgtctttagaaagtaggtccaatataaagttctaggtttagggtttggattttgaagggtttgtaatcaagatgaaacaataatccc 23509858  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttt-tcaattaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    ||| | |||||||||||||||||||||||| || ||||| |||||||   ||| ||||||| ||||||||||  ||||||||||||  |||| |||||||    
T  23509857 aaggcactttttattattatttttaaaccg-ttaaaatcacaactttgaaaataaaactcttttctaatcatcaataaaagttaatcaaattgaacaact 23509759  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||||| |||| |||||||||| ||||||| ||||||||| || ||||||    
T  23509758 ccatgttagaacgatactctctttttactacttcggtaaaccgtgcacttg 23509708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 48 - 289
Target Start/End: Original strand, 19695944 - 19696183
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||| ||||||| ||| |||||| |||||||||| || ||||||||||||||||||||||    
T  19695944 aaacttgtctttagaaaataggtccaacataaagttctaggtttagggtttgatttgtgaaggatttgtcaccatgacgaaccaataatcccaagacgct 19696043  T
Q  148 ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttg 246  Q
    ||||||||||||||  ||||||||   |||||||||||||||| | |||||||||||||||||||| || | ||| ||| ||||  | ||||| |||| |    
T  19696044 ttttattattatttccaaaccgttaataatcccaacttttcaactgaaactctcttctaatcattcgtagaggttgattaaatt-cataactcaatgtcg 19696142  T
Q  247 gaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||| ||||||| |||||||||| |||||||||||| ||||||    
T  19696143 gaacgatactct-ttattactac-tcggtaaactgtgcacttg 19696183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 289
Target Start/End: Complemental strand, 23523505 - 23523256
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  23523505 cttaagagaaacttgtcttttgaaagtaggtccaatataaagttctaggtttagggtttggtttgtgaagggtttgtcatcaagatgcaccaataatccc 23523406  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    |||  |||||||| |||| ||||||||||  || |||||  |||||| ||| | |||| || ||||||||||  ||||||||||||  |||| |||||||    
T  23523405 aaggtgctttttactattctttttaaacc-attaaaatcagaactttgcaactgaaacacttttctaatcatcaataaaagttaatcaaatttaacaact 23523307  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||||||||| ||||| |||| ||||||| |||||||||||| ||||||    
T  23523306 tcatgttggaacgatactttctttttactacttcggtaaactgtgcacttg 23523256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 23346735 - 23346490
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| || ||| ||| ||||||||||| |||||| |||||||||| || |||||| |||||||||| |    
T  23346735 gagaaacttgtctttagaaaataggtccaacataaagttataggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccagtaatcccaaggc 23346636  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttca---attaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    ||||||||||||| ||||||||||| || ||||| ||||||||||   | |||| |||||||||||||||| ||| ||||||||||||| || || |||     
T  23346635 gctttttattattgtttttaaaccg-ttaaaatctcaacttttcaaccactaaaatctcttctaatcattcgtaatagttaattgaattcaaaaattccc 23346537  T
Q  242 tgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | | ||||| | ||||| |||||||||||||||||||| || ||||||    
T  23346536 tatcggaacgacactct-ttattactacatcggtaaaccgtgcacttg 23346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 289
Target Start/End: Original strand, 18993674 - 18993936
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||| ||||||||| |||| || ||||| |||||| ||| ||||||||||| |||||| ||||||| |||||||    
T  18993674 gagatgtgataggcttaagagaaacttgtccttagaaagtgggtctaatataaagttctagatttagggtttggtttgtgaaggatttgtcaacaagatg 18993773  T
Q  127 aaccaataatcccaa-gacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaatt 225  Q
    ||||||||| || || ||  ||||||||||||||||| || |||||  |||||| |||||||||| | |||| ||||||||||||  |||||||||||||    
T  18993774 aaccaataacccaaaagagcctttttattattattttcaa-ccgttaaaaatcctaacttttcaactgaactttcttctaatcatcaataaaagttaatt 18993872  T
Q  226 gaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||| ||||||||| | ||||||  |||||||||| ||||||| ||| |||| ||| ||||||    
T  18993873 gaattgaacaactccctcttggaaggatactctctttttactacttcgataaattgtgcacttg 18993936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 25922939 - 25922694
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| |||||||||||||||||||| ||||| || ||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |    
T  25922939 gagaaacttatctttagaaagtaggtccaatataaagtt-taggtttagggtttggtttatgaaggatttgtcaccaagatgaaccaataatctcaaggc 25922841  T
Q  145 gct-ttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctc-ttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    ||| ||||||||||  ||||||| ||||  ||||   | |||||||| | ||  ||| |||| |||||  |||||||||||||||||| |||||||||||    
T  25922840 gctcttttattatt-cttttaaatcgttaaaaataaaaccttttcaactgaaacctctttctgatcatcaataaaagttaattgaattgaacaactccat 25922742  T
Q  243 gttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |||||||| |||||||||| | ||||| |||||| |||||| ||||||    
T  25922741 gttggaacgatactctcttttaactacttcggtagaactgtgcacttg 25922694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 17793533 - 17793347
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||  |||||||||| |||||| |||||||||| || ||||||||||||||||| |    
T  17793533 gagaaaattgtctttagaaaataggtccaacataaaattctagatttatggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaaggc 17793434  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaatt-aaactctcttctaatcattcataaaagttaattgaatt 230  Q
    ||||||||||||| |||| ||||||||  | |||| || |||||| || ||||||||||||||| ||||||| ||||| ||| ||||    
T  17793433 gctttttattatttttttcaaaccgttaaatatccgaaattttcacttgaaactctcttctaatgattcatagaagttgattaaatt 17793347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 19994124 - 19994313
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||||||||| |||||||||||| ||||| || ||| ||| ||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  19994124 cttaagagaaacttgtctttaggaagtaggtccaatataaagtt-taggtttagggtttgttttgtgaagggtttgtcaccaagatgaactaataatccc 19994222  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaatt 230  Q
    ||| |||||||||||||| ||||| ||||| |  |||||  | |||| ||| | |||| ||||||||||||  |||||| ||| |||||||    
T  19994223 aaggcgctttttattattctttttcaaccgataaaaatcaaatctttacaactgaactttcttctaatcatcaataaaatttatttgaatt 19994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 15470721 - 15470482
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||| ||||||||||  |||||| ||| ||||||||||| |||||  |||||||||| ||||||||||||||| ||| ||    
T  15470721 gagaaacttgtctttagaaaatagctccaacataaggttctaggtttagggtttggtttgtgaagaatttgtcaccatgatgaaccaataatcgcaa-ac 15470623  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
     ||||||||||||| |||| || ||||  |||||| ||||||  | || |||||||| |||||||||  |||||||||||||||||  | |||||| |||    
T  15470622 actttttattatta-ttttcaatcgttaaaaatccaaactttcaacttgaactctctgctaatcattgttaaaagttaattgaatt-cataactccttgt 15470525  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||  ||| ||| |||||||||| |||||||||||| ||||||    
T  15470524 cggaatgata-tct-ttattactacttcggtaaactgtgcacttg 15470482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 289
Target Start/End: Original strand, 29254510 - 29254762
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||  |||||| ||||| |||||||||||||  ||||||||||||||||||     
T  29254510 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggttgagggttt-gtttaagaagggtttgtcattaagatgaaccaataatcct 29254607  T
Q  140 aagacgcttt--tta-ttattatttttaaaccgttt-taaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaac 234  Q
    ||| | ||||  ||| |||||| |||| ||||||||  ||||||||||||| ||| ||||||||| ||||||||||  || |||| ||||  |||| |||    
T  29254608 aaggctcttttattatttattaattttcaaccgtttaaaaatcccaactttgcaatttaaactct-ttctaatcatcaattaaagctaatcaaattgaac 29254706  T
Q  235 aactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |||||| ||||||||| |||||||||| ||||||| |||||| |||||| ||||||    
T  29254707 aactccctgttggaacgatactctctttttactacttcggtagaactgtgcacttg 29254762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 14893956 - 14894077
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||||||||||||||||||||||| |||| |||||| ||| ||||||||| | |||||| |||||||||| |||||||||||||||||    
T  14893956 cttaagagaaacttgtctttagaaagtaggtccaacttaaatttctaggtttagggtttggtatgtgaaggatttgtcaccatgatgaaccaataatccc 14894055  T
Q  140 aagacgcttt-ttattattatt 160  Q
    ||| |||||| |||||||||||    
T  14894056 aaggcgctttattattattatt 14894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 15172754 - 15172994
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| | |||||||| ||| ||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| || ||||||||||||||||  |    
T  15172754 gagaaacttatgtttagaaaatagctccaacataaggttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaaagc 15172853  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    |||||||||||||| |||| || ||||  |||||| ||||||  | || || ||||| |||||||||  |||||||||||||||||  | |||||| |||    
T  15172854 gctttttattatta-ttttcaatcgttaaaaatccaaactttcaacttgaaatctctgctaatcattgttaaaagttaattgaatt-cataactccttgt 15172951  T
Q  245 tggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||  ||| ||| |||||||||| |||||||||||| ||||||    
T  15172952 cggaatgata-tct-ttattactacttcggtaaactgtgcacttg 15172994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 12660001 - 12659756
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||  ||| || |||||||| |||||| |||||||||| || ||||||||||||| |||||    
T  12660001 gagaaacttgtctttagaaaataggtccaacataaagttctaagtttagg-tttggtttgtgaaggatttgtcaccatgacgaaccaataatcctaagac 12659903  T
Q  145 gctttttatta---ttatttttaaaccgttttaaatcccaacttttcaatt-aaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
     ||||||||||   |||||||    |  ||  |||||| |||||||||||| | ||||| ||||||| |||  | ||||||||||||| |||| ||||||    
T  12659902 actttttattattgttattttatttcaattaaaaatccaaacttttcaattcagactcttttctaataattgttgaaagttaattgaa-taaataactcc 12659804  T
Q  241 atgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||  |||| ||||||| ||||||||||||||||| || || ||||||    
T  12659803 atgtcagaacgatactct-ttattactacatcggtagaccgtgcacttg 12659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 276
Target Start/End: Complemental strand, 20218039 - 20217806
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||| |||||||||||||| || ||||| || ||| ||| ||||||| ||| |||||||||||| |  | |||||||||||||||||    
T  20218039 cttaagagaaacttgtcattagaaagtaggtcaaatataaagtt-taggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatccc 20217942  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcat-tcataaaagttaattgaattaaacaact 238  Q
    ||||||| |||||||||  | ||| ||||||   |||||||| |||| ||| | |||| |||||||||||| |  |||||||||||| |||| |||||||    
T  20217941 aagacgccttttattat--tctttcaaccgtacaaaatcccatctttacaactgaactttcttctaatcatcttctaaaagttaattaaattgaacaact 20217844  T
Q  239 ccatgttggaacaatactctcttattactacatcggta 276  Q
     | | || |||| |||||||||| ||||||| ||||||    
T  20217843 tcctcttagaacgatactctctttttactacttcggta 20217806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 276
Target Start/End: Complemental strand, 22112064 - 22111831
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||| |||||||||||||| || ||||| || ||| ||| ||||||| ||| |||||||||||| |  | |||||||||||||||||    
T  22112064 cttaagagaaacttgtcattagaaagtaggtcaaatataaagtt-taggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatccc 22111967  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcat-tcataaaagttaattgaattaaacaact 238  Q
    ||||||| |||||||||  | ||| ||||||   |||||||| |||| ||| | |||| |||||||||||| |  |||||||||||| |||| |||||||    
T  22111966 aagacgccttttattat--tctttcaaccgtacaaaatcccatctttacaactgaactttcttctaatcatcttctaaaagttaattaaattgaacaact 22111869  T
Q  239 ccatgttggaacaatactctcttattactacatcggta 276  Q
     | | || |||| |||||||||| ||||||| ||||||    
T  22111868 tcctcttagaacgatactctctttttactacttcggta 22111831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 29094073 - 29094308
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttat-gaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||||| ||||| |||||||| || ||| |||  |||||| |||   |||||||||||||||| || | |||||||||||| |||    
T  29094073 gagaaacttgtctttagaaagaaggtctaacataaagttttaggtttaaggtttgattttgagaagggtttgtcaccatgacggaccaataatcccgaga 29094172  T
Q  144 cgctttttattattat--ttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    |||||||||||||| |  |||| || |  |  |||||| |||||| |||  ||||||| ||||| |||||  | |||||||||||||||  | ||||||     
T  29094173 cgctttttattattgttatttttaatctctaaaaatccaaactttacaacaaaactcttttctactcattgttgaaagttaattgaatt-cataactccc 29094271  T
Q  242 tgttggaacaatactctcttattactacatcggtaaa 278  Q
    ||| ||||| ||||||| |||||||||||||||||||    
T  29094272 tgtcggaacgatactcttttattactacatcggtaaa 29094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 277
Target Start/End: Original strand, 22738388 - 22738623
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    |||||||||  |||||  |||||   ||||||||||||||||||||||     
T  22738388 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgagaaggacttgtcgttaagatgaaccaataatcccaagg 22738487  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattca-taaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||||||| || |  ||  ||| ||||||||| ||| | || ||||||||||||||  | ||||||||||||||||| |||||||||     
T  22738488 ctctcttttattattattttcaatcgtttgaaaaccccaactttgcaacttaattctcttctaatcatcaactaaaagttaattgaattgaacaactccc 22738587  T
Q  242 tgttggaacaatactctcttattactacatcggtaa 277  Q
    ||| ||||| ||||||| |||||||||| |||||||    
T  22738588 tgtcggaacgatactcttttattactacttcggtaa 22738623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 269
Target Start/End: Complemental strand, 25338807 - 25338567
Alignment:
Q  28 agatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatga 127  Q
    ||||| |||| ||||| |||||||||||||||||||||| ||||||| ||||| || ||| ||| ||||||||  | ||||||||||||||  |||||||    
T  25338807 agatgtgatagacttaagagaaacttgtctttagaaagtgggtccaatataaagtt-taggtttagggtttgggatgtgaagggtttgtcattaagatga 25338709  T
Q  128 accaataatcccaagacg-ctttttattattatttttaaaccgttttaaatccca-acttttcaatt-aaactctcttctaatcattcataaaagttaat 224  Q
    | ||||||||||||| || ||||||||||||| |||| ||||| |  |||||  | | |||| |||| ||||||| ||| |||||   ||||||| ||||    
T  25338708 atcaataatcccaaggcgcctttttattatta-ttttcaaccg-taaaaatcaaacattttttaattgaaactcttttccaatcaccaataaaagctaat 25338611  T
Q  225 tgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||| ||||||||| ||||| ||||||||| |||| |||||||    
T  25338610 tgaattgaacaactcc-tgttgaaacaatactttctttttactac 25338567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 20464905 - 20465010
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||| ||||||||  |||||| ||  ||||||||||| |||||| |||||||||||||||||||||||||| |||| |    
T  20464905 gagaaacttgtctttagaaaataggttcaacataaggttctaggtta-gggtttggtttgtgaaggatttgtcaccaagatgaaccaataatcacaaggc 20465003  T
Q  145 gcttttt 151  Q
    |||||||    
T  20465004 gcttttt 20465010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 2647879 - 2648019
Alignment:
Q  121 aagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatcc-caacttttcaattaaactctcttctaatcattcataaa 217  Q
    |||||||||||||||||||||||| |||||||||||  ||| ||| |||||||| ||| || ||||||| ||| || | ||||||||||||||  || ||    
T  2647879 aagatgaaccaataatcccaagactctttttattatattatctttcaaccgtttgaaaacctcaactttacaactagattctcttctaatcatcgattaa 2647978  T
Q  218 agttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||| |||| |||| ||||||||| |||||||    
T  2647979 agttaattgaatttaacagctccctgttggaacgatactct 2648019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 31965072 - 31964931
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||||||| ||| |  |||| ||| | ||||||||| |||| | ||||||||||||||||||||||||||||||| |    
T  31965072 gagaaacttgtctttagaaaataggtccaacttaaga--ctaggtttagagtttggtttgtgaaagatttgtcaccaagatgaaccaataatcccaaggc 31964975  T
Q  145 gcttt--ttattattatttttaaaccgttttaaatcccaacttt 186  Q
    | |||  |||||| || |||| |||||||  |||||||||||||    
T  31964974 gtttttattattactaattttcaaccgttaaaaatcccaacttt 31964931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 5399757 - 5399856
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||| |||||||||| |||||||| |||||| |||   |||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  5399757 gagaaacttgtctttaaaaagtaggtctaacataaagttctaggtttaaaggtttggtttctgaaggatttgtcaccatgatgaaccaataatcccaaga 5399856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 10916483 - 10916610
Alignment:
Q  150 ttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaa 249  Q
    |||||||| |||||||||||||  ||||| |||||| |||| | |||||||||||||||||||  ||| |||||||||||||||||||| | ||| ||||    
T  10916483 ttattattgtttttaaaccgttaaaaatctcaacttctcaactgaactctcttctaatcattctcaaaggttaattgaattaaacaacttcctgtcggaa 10916582  T
Q  250 caatactctcttattactacatcggtaaac 279  Q
    | |||  ||||| ||||||| |||||||||    
T  10916583 cgata--ctctttttactacttcggtaaac 10916610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 3924169 - 3924282
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||| ||    |||||||||||||||||||  ||| ||||||||||| |||||| |||||||||| ||  ||||||||||  |||| |    
T  3924169 gagaaacttgtctttaaaa----ggtccaacataaaattctaagtttagggtttggtttgtgaaggatttgtcaccatgaaaaaccaataatttcaaggc 3924264  T
Q  145 gctttttattattatttt 162  Q
    ||||||||||||||||||    
T  3924265 gctttttattattatttt 3924282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 18974187 - 18974306
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| ||||||||||||||||||||||| |  |||||| ||| |||||| |||| |||||| |||||||||| || ||||||||||||||| | |    
T  18974187 gagaaacttttctttagaaagtaggtccaacatcaggttctaggtttagggtttagtttgtgaaggatttgtcaccatgacgaaccaataatcccatggc 18974286  T
Q  145 gctttttattattatttttaa 165  Q
     | ||||||||||||| ||||    
T  18974287 tc-ttttattattattgttaa 18974306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 20225612 - 20225722
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||| ||| | ||||||||| ||| || ||||||| ||||||||||||||||||||||||     
T  20225612 gagaaacttgtctttagaaaatagatccaacataagatt-taggtttagagtttggtttgtgatggatttgtcatcaagatgaaccaataatcccaagat 20225710  T
Q  145 gctttttattatt 157  Q
    | |||||||||||    
T  20225711 g-tttttattatt 20225722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 22119596 - 22119706
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||| ||| | ||||||||| ||| || ||||||| ||||||||||||||||||||||||     
T  22119596 gagaaacttgtctttagaaaatagatccaacataagatt-taggtttagagtttggtttgtgatggatttgtcatcaagatgaaccaataatcccaagat 22119694  T
Q  145 gctttttattatt 157  Q
    | |||||||||||    
T  22119695 g-tttttattatt 22119706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 269
Target Start/End: Original strand, 16470455 - 16470680
Alignment:
Q  47 gaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    |||| ||||||||||||| |||||| |||||||  |||||| |||   ||||||||||  |||||||||||  ||| |||| |||||||||  |||| |     
T  16470455 gaaatttgtctttagaaattaggtctaacataaggttctaggtttaatggtttggtttgagaagggtttgttgccatgatggaccaataatatcaaggct 16470554  T
Q  146 c--tttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    |  |||||||||||| ||| || |  ||  ||| ||||||||||||| |||||| || ||||||||||  |  ||||||||||||||||||||||||| |    
T  16470555 cactttttattattaatttcaatcgtttaaaaaccccaacttttcaacttaaac-cttttctaatcatcaactaaagttaattgaattaaacaactcctt 16470653  T
Q  243 gttggaacaatactctcttattactac 269  Q
    |||| ||| |||||||||| |||||||    
T  16470654 gttgaaacgatactctctttttactac 16470680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 22600911 - 22600796
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||| ||||||||||||||||| |||||||| |||||| |||  ||||| ||||| |||| |||||||||  | |||||||||||||||||||      
T  22600911 gagaaacttttctttagaaagtaggtctaacataaagttctaggtttaaggttttggtttgtgaatggtttgtcattatgatgaaccaataatcccaaag 22600812  T
Q  144 cgctttttattattat 159  Q
    | ||||||||||||||    
T  22600811 ctctttttattattat 22600796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 24392450 - 24392336
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| || |||| | |||||| ||| |    
T  24392450 gagaaacttgtctttagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaactagtaatcctaaggc 24392351  T
Q  145 gctttttattattatt 160  Q
     | |||||||||||||    
T  24392350 tc-ttttattattatt 24392336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 289
Target Start/End: Original strand, 29360854 - 29361095
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||| |||||| |||  ||||| ||||| |||||| ||||||   | ||||||||||||||| |||| | |||||||    
T  29360854 gtctttagaaattaggtctaacataaagttctaggtttaaggttttggtttgtgaaggatttgtcgttaggatgaaccaataatctcaaggctcttttta 29360953  T
Q  153 ttatt---attt-ttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttgg 247  Q
    |||||   |||| || |||| |||  ||| ||||||||| ||| | || ||||||||||||||  |  |||||||||| |||| ||||||||| ||||||    
T  29360954 ttattttaatttcttcaaccatttgaaaaccccaactttgcaacttaattctcttctaatcatcaactaaagttaattaaattgaacaactccctgttgg 29361053  T
Q  248 aacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||| ||||||| || ||| ||| ||| ||||| || ||||||    
T  29361054 aacgatactctatttttattacttcgataaaccgtgcacttg 29361095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 40 - 162
Target Start/End: Complemental strand, 24545185 - 24545065
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||| ||||||||||||||||||||| ||||| || ||| ||| | ||||| ||| ||||||| ||||||  ||||||||||||| ||| |    
T  24545185 cttaagagaaactcgtctttagaaagtaggtccaatataaagtt-taggtttagagtttg-tttgtgaaggggttgtcattaagatgaaccaatgatcac 24545088  T
Q  140 aagacgctttttattattatttt 162  Q
    ||||| |||||||||||||||||    
T  24545087 aagactctttttattattatttt 24545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 28080056 - 28079805
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||| ||||||||||||| ||||||||||||||  |||||| |||  ||||| ||||| |||||| ||||||   | |||||||||||||||| |||     
T  28080056 gagaaatttgtctttagaaattaggtccaacataaggttctaggtttaaggttttggtttgtgaaggatttgtcgttatgatgaaccaataatccgaagg 28079957  T
Q  144 cgctttttattattat------ttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | ||||||||||||||      ||| || |  ||  ||| ||||||||| ||| | || ||||||||||||||  |  ||||||||||||||| ||||||    
T  28079956 ctctttttattattatattttctttcaaccaattcaaaaccccaactttgcaacttaa-tctcttctaatcatcaactaaagttaattgaattgaacaac 28079858  T
Q  238 tccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    ||  ||| ||||| ||||||| || ||||||| |||||| |||||| ||||||    
T  28079857 tctctgtcggaacgatactctatttttactacttcggtagaactgtgcacttg 28079805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 8604031 - 8604270
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||| ||| |||||| |||||||| || ||  |||   |||||||||| ||||||||||||||||| |||| | ||||||||||||||    
T  8604031 gagaaacttgtctttacaaattaggtctaacataaagttataagtttaaaggtttggtttgtgaagggtttgtcaccatgatggatcaataatcccaaga 8604130  T
Q  144 cgct-ttttattatta-----tttttaaaccgttttaa-atcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaa 236  Q
    | || |||||||||||     | ||| || ||||| || | |||||||||  |||| ||| |||||||||||||  |  ||||||||||||||| |||||    
T  8604131 ctctcttttattattatattttctttcaatcgtttaaataccccaactttgaaatttaac-ctcttctaatcatcaactaaagttaattgaattgaacaa 8604229  T
Q  237 ctccatgttggaacaatactc-tcttattactacatcggta 276  Q
    |||| | | | ||| |||||| | |||||||||||||||||    
T  8604230 ctccctatcgaaacgatactctttttattactacatcggta 8604270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 25508116 - 25508224
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||  || ||| |||||| |||| ||||||  ||||||| | || ||||||||||||||    
T  25508116 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-aaggtttagggttt-gtttgtgaaggaattgtcactatgaggaaccaataatccc 25508213  T
Q  140 aagacgctttt 150  Q
    |||||||||||    
T  25508214 aagacgctttt 25508224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 26018485 - 26018593
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| |||||| |||| ||||||  ||||||| | || ||||||||||||||    
T  26018485 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttagggttt-gtttgtgaaggaattgtcactatgacgaaccaataatccc 26018582  T
Q  140 aagacgctttt 150  Q
    ||| |||||||    
T  26018583 aaggcgctttt 26018593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 19614702 - 19614527
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-t 191  Q
    ||||||||||||||| | |||||| ||| |||| ||||||||| ||||| | || ||||||||||||||| || |||||  ||| ||||||||| ||| |    
T  19614702 ggtttggtttatgaaagatttgtcgccatgatggaccaataattccaaggctctcttttattattattttcaa-ccgttaaaaaccccaactttgcaaat 19614604  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | |||||||| ||||||||  |  ||||||| ||| ||||||||||| | ||| ||||| |||||||||| |||||||    
T  19614603 tgaactctct-ctaatcatcaactaaagttatttggattaaacaacttcctgtcggaacgatactctctttttactac 19614527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 12992553 - 12992434
Alignment:
Q  122 agatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaag 219  Q
    ||||||||||||||||||||||| || ||||||||  ||| ||| |||| ||| ||| ||||||||| ||  |  | ||||||||||||||  | |||||    
T  12992553 agatgaaccaataatcccaagactctctttattatattatctttcaaccatttgaaaacccaactttacatcttgattctcttctaatcatcaacaaaag 12992454  T
Q  220 ttaattgaattaaacaactc 239  Q
    ||||||||||||||||||||    
T  12992453 ttaattgaattaaacaactc 12992434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 29597022 - 29597101
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||| |||||||    
T  29597022 tctcttctaatcatcagtaaaagttaattgaattaaccaactccatgtcggaacgatactct-ttattactacttcggtaa 29597101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 4741510 - 4741633
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||| |||||||  ||||||  ||| ||| |||||| |||| |||||| || ||||  | |||| |||||||||| |    
T  4741510 cttaagagaaacttgtctttagaaagtgggtccaatgtaaaat--taggtttagggttt-gtttgtgaaggcttcgtcattatgatggaccaataatctc 4741606  T
Q  140 aagacgctttttattattatttttaaa 166  Q
    ||| |||||||||||||| ||||||||    
T  4741607 aaggcgctttttattattctttttaaa 4741633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 19560395 - 19560229
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt--tattattatttttaaaccgttttaaatc-ccaacttttcaat 191  Q
    |||||||||  |||||  ||||||  ||| |||||||||| ||||||| | |||||  ||||||||| ||| |||||||||||| | |||||||| |||     
T  19560395 gtttggtttgagaaggacttgtcattaaggtgaaccaatagtcccaaggctcttttaatattattatctttcaaccgttttaaaactccaactttacaac 19560296  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |    ||||||||||||||  |  ||||||||||||||||||||||||| ||| ||||| |||||||    
T  19560295 ttggttctcttctaatcatcgactaaagttaattgaattaaacaactccttgtcggaacgatactct 19560229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 26139189 - 26139294
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| |||||| |||| ||||||  ||||||| | || ||||||||||||||    
T  26139189 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttagggttt-gtttgtgaaggaattgtcactatgacgaaccaataatccc 26139286  T
Q  140 aagacgct 147  Q
    ||| ||||    
T  26139287 aaggcgct 26139294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 26157858 - 26157963
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| |||||| |||| ||||||  ||||||| | || ||||||||||||||    
T  26157858 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttagggttt-gtttgtgaaggaattgtcactatgacgaaccaataatccc 26157955  T
Q  140 aagacgct 147  Q
    ||| ||||    
T  26157956 aaggcgct 26157963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 26474481 - 26474706
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||| ||||||| |||||| ||||| | ||| ||| |||   |||||||||| |||| | |||||| ||  || | ||||||||||||||      
T  26474481 gagaaacttgtccttagaaattaggtctaacatgagattttaggtttaatggtttggtttgtgaaagatttgtctccttgacggaccaataatcccaaag 26474580  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||| ||| || |||||  |||  |||||||| ||| ||||||||||| ||||||||  |  |||||||||||||||||||||||||     
T  26474581 ctctcttttattattaatttcaa-ccgttaaaaactccaactttgcaaattaaactctct-ctaatcatcaactaaagttaattgaattaaacaactccc 26474678  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    ||| || || |||||||||| |||||||    
T  26474679 tgtcggtacgatactctctttttactac 26474706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 25785884 - 25785706
Alignment:
Q  105 tgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttt-----taaaccgttttaaatccc-aacttttcaattaaactc 198  Q
    |||||| |||||||  | |||||||||||||||||||  | |||||||||||||| ||     | |||||||| ||| ||| |||||| ||| |||| ||    
T  25785884 tgaaggatttgtcattatgatgaaccaataatcccaatgctctttttattattatattctctttcaaccgtttgaaaaccccaactttgcaactaaattc 25785785  T
Q  199 tcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||| ||||  |  ||||||||||||||| ||||||||| ||| ||||| ||||||| || ||||||  |||||||    
T  25785784 tcttctattcatcaactaaagttaattgaattgaacaactccctgtcggaacgatactctttttttactatttcggtaa 25785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 12443221 - 12443282
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   |||||||||||||||||||||||||||| ||||||||| |||||||    
T  12443221 tctcttctaatcaccaataaaagttaattgaattaaacaactccttgttggaacgatactct 12443282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 15507929 - 15507754
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttc-aat 191  Q
    ||||||||||||||| | |||||| ||| |||| |||||||||| |||| | || ||||||||||| |||| |||||||  ||| ||||||||| | |||    
T  15507929 ggtttggtttatgaaagatttgtcgccatgatggaccaataatctcaaggctctcttttattatta-ttttcaaccgttaaaaaccccaactttgcaaat 15507831  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | ||||||| |||||||||  |  | |||||||||||||||| || ||| ||| ||||| ||||| |||| |||||||    
T  15507830 tgaactctc-tctaatcatcaactatagttaattgaattaaaaaattccctgtcggaacgatactatctttttactac 15507754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 32545102 - 32545222
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||| ||||  |||||| |||||||  |||||| |||    ||||||||| |||||| |||||||  | |||||||||||||||||||| |    
T  32545102 agaaacttgtcttcagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaaggatttgtcattatgatgaaccaataatcccaaggc 32545201  T
Q  145 g-ctttttattattattttta 164  Q
    | |||||||||||||||||||    
T  32545202 gcctttttattattattttta 32545222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 17120103 - 17120266
Alignment:
Q  96 tttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatccc-aacttttcaattaa 194  Q
    |||||||| ||||||  ||||||   ||||||||||||||||||||| | | |||||||||   |||| |||||||| ||| ||| |||||| ||  |      
T  17120103 tttggtttgtgaaggacttgtcagttagatgaaccaataatcccaaggctccttttattatatcttttcaaccgtttgaaaaccccaactttacatcttg 17120202  T
Q  195 actctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    | |||||||||||||   | |||||||||||||||||||||||||| |||  |||| |||||||    
T  17120203 attctcttctaatcaccaacaaaagttaattgaattaaacaactccctgtcagaacgatactct 17120266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 19569720 - 19569613
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    |||||| |||| |||||| |||||||| |||||| |||  ||||| ||||| |||||| |||||||  | |||||||||||||||||||| | | |||||    
T  19569720 gtcttttgaaattaggtctaacataaagttctaggtttaaggttttggtttgtgaaggatttgtcattaggatgaaccaataatcccaaggctcctttta 19569621  T
Q  153 ttattatt 160  Q
    ||||||||    
T  19569620 ttattatt 19569613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 28720884 - 28720813
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaaggg 111  Q
    |||| ||||||||||||||||||||||||||||| |||||| || ||| ||| |||||| |||| |||||||    
T  28720884 cttaagagaaacttgtctttagaaagtaggtccatcataaagttataggtttagggtttagtttgtgaaggg 28720813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 30670819 - 30670594
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    |||||| || | ||||||||||||||| || | || ||| ||| |||      
T  30670819 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggattgtaaagggtttgtcaccatgacggactaatgatctcaatg 30670720  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||||| | || |||||  ||| ||||||||| ||| || |||||||| ||||||||  |  |||||||||||||||||||||||||     
T  30670719 ctctcttttattattattctcaa-ccgttaaaaaccccaactttgcaaattgaactctct-ctaatcatcaactaaagttaattgaattaaacaactccc 30670622  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    ||| ||||| |||||| ||| |||||||    
T  30670621 tgtcggaacgatactcactttttactac 30670594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 25949852 - 25949969
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| |||  |||||||| ||  ||||||||||||||   || | ||||||||||||||||    
T  25949852 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttaagggtttggattgagaagggtttgtcactttgacggaccaataatcccaaga 25949951  T
Q  144 c-gctttttattattatt 160  Q
    |  | |||||||||||||    
T  25949952 cacccttttattattatt 25949969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 18007020 - 18007100
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||  | ||| |||||||||||||||| ||||| |||  |||| ||||||| |||||||||| |||||||    
T  18007020 tctcttctaatcatcaacaaaggttaattgaattaaactactccctgtcagaacgatactcttttattactacttcggtaa 18007100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 20435756 - 20435869
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||||  ||||| |||||||||| | ||| |||||| |||| ||||||  |||| |   |||||    
T  20435756 gagatgtgataggcttaagagaaacttgtctttagaaagtaaatccaatataaaattct-ggtttagggttt-gtttgtgaaggacttgttatttagatg 20435853  T
Q  127 aaccaataatcccaag 142  Q
    ||||||||||||||||    
T  20435854 aaccaataatcccaag 20435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 13216911 - 13216845
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaaggg 111  Q
    |||||| ||||||||||||| |||||| |||||||| |||||| ||| |||||||| || |||||||    
T  13216911 gagaaaattgtctttagaaaataggtctaacataaagttctaggtttagggtttggcttgtgaaggg 13216845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 14991832 - 14991739
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||| ||||||||||| ||||| || ||||| |||||| | |  |||||| ||| ||||||||||||||||| || | |||||||||||||||    
T  14991832 aaacttctctttagaaagaaggtctaatataaagttctagatctgaggtttgatttgtgaagggtttgtcaccacgacg-accaataatcccaag 14991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 21573255 - 21573193
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  21573255 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 21573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 5670388 - 5670240
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||||||  |||||  ||||||  |||||||| |||| |||||||| | |||||||||||  ||| ||| |||||||| ||| ||| |||||| |||     
T  5670388 gtttggtttgagaaggacttgtcattaagatgaatcaatgatcccaaggctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 5670289  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    |  | ||||||||||||||  | |||||||| ||||||| |||||||||    
T  5670288 ttgattctcttctaatcatcaacaaaagttagttgaatttaacaactcc 5670240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 24860779 - 24860699
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||    
T  24860779 ctctcttctaatcatctctaaaggttaattaaattaaactactccctgttggaacgatactctttta-tactacttcggtaa 24860699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 20465036 - 20465131
Alignment:
Q  174 aaatcccaacttttcaatta-aactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||| | ||||||||||  ||||||| ||||||||||| | |||||||||||||||  | |||||||||| ||||| ||||| | ||||||||||    
T  20465036 aaatccaatcttttcaatttgaactctcatctaatcattcttgaaagttaattgaatt-cataactccatgtcggaacgatactattttattactac 20465131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 20221761 - 20221823
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattatt 157  Q
    |||||| ||| | |||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  20221761 ggtttgctttgtaaaggatttgtcaccaagatgaatcaataatcccaaggcg-tttttattatt 20221823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 22115745 - 22115807
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattatt 157  Q
    |||||| ||| | |||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  22115745 ggtttgctttgtaaaggatttgtcaccaagatgaatcaataatcccaaggcg-tttttattatt 22115807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 10712452 - 10712390
Alignment:
Q  215 aaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  10712452 aaaagttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 10712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 18974328 - 18974428
Alignment:
Q  179 ccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggta 276  Q
    |||||||||||| || ||||||||||||||||||  | |||||||||||||||  | |||||| | | ||||||||| ||| || |||||||||||||||    
T  18974328 ccaacttttcaacttgaactctcttctaatcattgttgaaagttaattgaatt-cataactccctataggaacaata-tcttttgattactacatcggta 18974425  T
Q  277 aac 279  Q
    |||    
T  18974426 aac 18974428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 22781294 - 22781356
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||| || |||||||| |||||||    
T  22781294 aaagttaattgaattaaacaactctctgtcggaacgatactcttttcattactacttcggtaa 22781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 23296792 - 23296750
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||||||||||||| | | |||||||||||||    
T  23296792 aaagttaattgaattaaacaactccctatcggaacaatactct 23296750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 1626832 - 1626893
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||  |  ||||||||||||||| ||||||||| ||| ||||| |||||||    
T  1626832 tctcttctaatcatcaactaaagttaattgaattgaacaactccctgtcggaacgatactct 1626893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 15842744 - 15842664
Alignment:
Q  197 tctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  15842744 tctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 15842664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 20164872 - 20164952
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  20164872 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 20164952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 20171569 - 20171649
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  20171569 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 20171649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 24854120 - 24854040
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||||||| ||||| | ||||||| ||||||| ||| |||||| |||||||    
T  24854120 ctctcttctaatcatctctaaaggttaattaaattaaactactccctattggaacgatactctttta-tactacttcggtaa 24854040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 32796042 - 32796005
Alignment:
Q  126 gaaccaataatcccaagacgctttttattattattttt 163  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  32796042 gaaccaataatcccgagacgctttttattattaatttt 32796005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 35243865 - 35243816
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| ||||||  |||||||  |||||||||||||||||||||||    
T  35243865 gtttggtttgtgaaggacttgtcacttagatgaaccaataatcccaagac 35243816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 1176843 - 1176768
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    ||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||| ||||||||    
T  1176843 tctaatcattgttgaaagttaattgaatt-cataactccctgtcggaacgatactcttttattactacttcggtaaa 1176768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 6795453 - 6795545
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtca 118  Q
    |||||| |||| ||| | ||||||||||| |||||||| |||||  |||||||| |||||| |||   |||||||||| |||||| |||||||    
T  6795453 gagatgtgatagactaaagagaaacttgtatttagaaaataggtataacataaagttctaggtttaaaggtttggtttgtgaaggatttgtca 6795545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 18107877 - 18107957
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||  ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  18107877 tctcttctaatcatttccaaaggttaattgaattgaattactccctgtcggaacgatactcttttaatactacttcggtaa 18107957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 19569560 - 19569477
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||| ||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||| ||| |||||||||| |||||||    
T  19569560 aaactctcatctaatcattatttaaagttaattgaatt-cataactccctgtcggaacgatattcttttattactacttcggtaa 19569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 6e-72; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 45 - 288
Target Start/End: Original strand, 16677609 - 16677854
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||||| || |||||||||||||||||||    
T  16677609 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaagac 16677708  T
Q  145 gctttttattattatttt-taaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    || |||||||||||||||  ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||| | ||||||||| |    
T  16677709 gccttttattattattttcaaaaccgttaaaaatcccaactttacaacttaaactctcttctaatcattcataataattaattgaactcaacaactccct 16677808  T
Q  243 gttggaacaatactctcttattactacatcggtaaactgtacactt 288  Q
    |||||||| ||||||| ||| |||||||| |||||||||| |||||    
T  16677809 gttggaacgatactcttttaatactacattggtaaactgtgcactt 16677854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 289
Target Start/End: Original strand, 31414991 - 31415259
Alignment:
Q  23 aaaagagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaa 122  Q
    |||||||||| ||||  ||||  ||||||||||||||||||||||||| ||| ||||| |||||| |||  |||||||||| |||| ||||||||| |||    
T  31414991 aaaagagatgtgataggcttaatagaaacttgtctttagaaagtaggtacaatataaagttctaggtttaaggtttggtttgtgaacggtttgtcatcaa 31415090  T
Q  123 gatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactc-tcttctaatcattcataaaagt 220  Q
    |||||||||||||| | ||||| |||||||||||| ||||| ||| |||  ||||| ||||||| ||| | |||||| | ||||||||||  ||||||||    
T  31415091 gatgaaccaataattctaagacactttttattattcttttttaacagttaaaaatcacaactttgcaactgaaactctttttctaatcatcaataaaagt 31415190  T
Q  221 taattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  31415191 taattgaattgaacaactcccagttggaacaatactctctttttactacttcggtaaaccgtgcacttg 31415259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 34 - 289
Target Start/End: Original strand, 12411047 - 12411302
Alignment:
Q  34 gatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaat 133  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||| ||||||||||||||    
T  12411047 gatagacttaagagaaacttgtctttagaaagtgggtccaacataaagttctaggtttagggtttggtttgtgaagggtttgtcatcaagatgaaccaat 12411146  T
Q  134 aatcccaagacgc-tttttattattatttttaaaccgttttaaatcccaacttttcaatt-aaactctcttctaatcattcataa-aagttaattgaatt 230  Q
    ||||||||| ||| |||||||||||||||| || |||||  |||||  |  ||||||| | ||||||  |||||||||||||||| ||||||||||||||    
T  12411147 aatcccaaggcgcctttttattattattttcaa-ccgttaaaaatcaaatattttcaactgaaactcctttctaatcattcataagaagttaattgaatt 12411245  T
Q  231 aaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||||||| | ||||||| |||  ||| |||||||||||  |||||| || ||||||    
T  12411246 aaacaactccctattggaacgata--ctcgtattactacattcgtaaaccgtgcacttg 12411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 20738874 - 20739103
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||| ||||| || ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||| |||| |    
T  20738874 gagaaacttgtctttagaaattaggtccaatataaagtt-taggtttagggtttggtttgtgaaggatttgtcaccaagatgaaccaataatctcaaggc 20738972  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    | ||||||||||| ||||| |||||||  |||||| | |||| ||| | |||| ||||||||||||  |||||| ||||||||||| |||||||||   |    
T  20738973 gttttttattattttttttcaaccgttaaaaatccaatctttacaactgaactttcttctaatcatcaataaaaattaattgaattgaacaactcc-cat 20739071  T
Q  245 tggaacaatactctcttattactacatcggta 276  Q
    || ||| |||||||||| ||||||| ||||||    
T  20739072 tgaaacgatactctctttttactacttcggta 20739103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 22171317 - 22171569
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg----aaccaataatccca 140  Q
    |||||| ||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| ||||| |||| || |    ||||||||||||||    
T  22171317 gagaaatttgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtgaccatgacggacgaaccaataatccca 22171416  T
Q  141 agacgctttttattattatt--tttaaaccgttttaaatcccaacttttcaa---ttaaactctcttctaatcattcataaaagttaattgaattaaaca 235  Q
    |  |||||||||||||| ||  |||| |       |||||||||||||||||   |||||||||||||||||||||||||| ||||||||| ||| ||||    
T  22171417 aagcgctttttattattgttattttagattaaacaaaatcccaacttttcaactattaaactctcttctaatcattcataatagttaattggatttaaca 22171516  T
Q  236 actccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||||| || ||||||    
T  22171517 actccatgtcggaacgatactct-ttattactacatcgttaaaccgtgcacttg 22171569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 276
Target Start/End: Complemental strand, 20724407 - 20724170
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||  ||||| ||||| |||||| |||||||  | ||||||||||||||||||||     
T  20724407 gagaaacttgtctttagaaagtaggtctaacataaatttctaggtttaaggttttggtttgtgaaggatttgtcattatgatgaaccaataatcccaagg 20724308  T
Q  144 cgctttttattatta-----tttttaaaccgtttt-aaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | |||||||||||||     | ||| | ||||||| ||| ||||||||| ||| | ||| |||||||||||||  |  |||||||||| |||| ||||||    
T  20724307 ctctttttattattatattttctttcagccgttttaaaaccccaactttgcaacttaac-ctcttctaatcatcaactaaagttaattaaattgaacaac 20724209  T
Q  238 tccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||| ||||| ||||||| || ||||||| ||||||    
T  20724208 tccatgtcggaacgatactctatttttactacttcggta 20724170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 24166792 - 24166902
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||  ||||| ||| ||| ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  24166792 gagaaacttgtctttagaaaatagaaccaacgtaagatt-taggtttagggtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaagac 24166890  T
Q  145 gctttttattatt 157  Q
    | |||||||||||    
T  24166891 g-tttttattatt 24166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 276
Target Start/End: Original strand, 90375 - 90605
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgc 146  Q
    ||||||||||||||||| |||||| |||||||  |||||| |||   |||||||||| ||| |  |||||| ||| ||   ||||||||||||||| | |    
T  90375 aaacttgtctttagaaattaggtctaacataaggttctaggtttaatggtttggtttgtgatgaatttgtcgccatgacagaccaataatcccaaggctc 90474  T
Q  147 t-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    | ||||||||||||||| || |  ||  ||| || |||||| ||| |||||| || ||||||||||  |  |||||||||||||||||||||||||||||    
T  90475 tcttttattattattttcaatcatttaaaaaccctaactttgcaacttaaac-cttttctaatcatcaactaaagttaattgaattaaacaactccatgt 90573  T
Q  245 tggaacaatactctcttattactacatcggta 276  Q
    |||||| |||||||||| ||||||| ||||||    
T  90574 tggaacgatactctctttttactacttcggta 90605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 22949103 - 22949341
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggt-ttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||| |||||| |||||||| |||||| |||  || |||||| || |||||| |||||||  | ||||||||||||||||||||    
T  22949103 gagaaacttgtctttagaaattaggtctaacataaagttctaggtttaaggttttggtgttgtgaaggatttgtcattatgatgaaccaataatcccaag 22949202  T
Q  143 acgctttttattatta-----tttttaaacc-gttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaa 236  Q
     | |||||||||||||     ||||| ||||  ||  ||| ||||||||| | | | || ||||||||||||||  || ||||||||||||||| |||||    
T  22949203 gctctttttattattatattttttttcaaccaattgaaaaccccaactttgctacttaa-tctcttctaatcatcaattaaagttaattgaattgaacaa 22949301  T
Q  237 ctccatgttggaacaatactctcttattactacatcggta 276  Q
    |||| ||| ||||| ||||||| || ||||||| ||||||    
T  22949302 ctccttgtcggaacgatactctatttttactacttcggta 22949341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 40 - 289
Target Start/End: Complemental strand, 31757698 - 31757448
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||| || || ||||| || ||| ||| ||||||| ||| |||||  ||||| |  | ||||||||||||||| |    
T  31757698 cttaagagaaacttgtctttagaaagtagttcgaatataaagtt-taggtttagggtttg-tttgtgaaga-tttgttattatgatgaaccaataatctc 31757602  T
Q  140 aagacgctttttattattatt--tttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcat-tcataaaagttaattgaattaaacaa 236  Q
    ||  |||||||||||||||||  |||||||||||  |||| | | |||| ||| | |||| |||||||||||| |  |||||||||||| | || |||||    
T  31757601 aatgcgctttttattattattcttttaaaccgttaaaaattcaatctttacaactgaactttcttctaatcatcttctaaaagttaattaagttgaacaa 31757502  T
Q  237 ctccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |||| ||||| ||| |||||||||| ||||||| |||||| ||| |||||||||    
T  31757501 ctccttgttgaaacgatactctctttttactacttcggtagaaccgtacacttg 31757448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 21382812 - 21383034
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgc 146  Q
    ||||||||||||||||| | |||| |||||||  |||||| |||   |||||||||| |||||| |||||| ||| || | ||||||||||||||| | |    
T  21382812 aaacttgtctttagaaattgggtctaacataaggttctaggtttaatggtttggtttgtgaaggatttgtcgccatgacggaccaataatcccaaggctc 21382911  T
Q  147 t-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    | ||||||||||||||| || | |||  ||| ||||||||| ||| ||||||||||| ||||||||  |  ||||||||||||||| |||||||| || |    
T  21382912 tcttttattattattttcaa-ctgttaaaaaccccaactttacaacttaaactctct-ctaatcatcaaataaagttaattgaattgaacaactctattt 21383009  T
Q  245 tggaacaatactctcttattactac 269  Q
     ||||  |||||||||| |||||||    
T  21383010 cggaatgatactctctttttactac 21383034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 276
Target Start/End: Complemental strand, 34222669 - 34222438
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||||||||| || ||||| ||  || ||| ||||||| ||| |||||| ||  | |  | ||||||||||||||||||||||    
T  34222669 gagaaacttgtctttagaaagtaggtcaaatataaagtttaaggtttagggtttg-tttgtgaaggattcattattatgatgaaccaataatcccaagac 34222571  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttc-aattaaactctcttctaatcat-tcataaaagttaattgaattaaacaactccat 242  Q
     ||||||||||||| ||||   |||||  |||||  | | |||| || | |||| |||||||||||| |  ||||||||| || |||| |||||||||||    
T  34222570 tctttttattatta-ttttcttccgttaaaaatcaaaccgtttcaaactgaactttcttctaatcatcttctaaaagttagttaaattgaacaactccat 34222472  T
Q  243 gttggaacaatactctcttattactacatcggta 276  Q
    |||||||| | ||||| || ||||||| ||||||    
T  34222471 gttggaacgacactctatttttactacttcggta 34222438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 17408287 - 17408180
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||| |||||||||||||| |||||| |||||||  |||||| |||   |||||||||| ||||||||||||||||| |||  ||||||||||||||||    
T  17408287 gagaatcttgtctttagaaattaggtctaacataaggttctaggtttaaaggtttggtttgtgaagggtttgtcaccatgatagaccaataatcccaaga 17408188  T
Q  144 cgcttttt 151  Q
    ||| ||||    
T  17408187 cgcctttt 17408180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 269
Target Start/End: Original strand, 21390204 - 21390416
Alignment:
Q  58 ttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctt-tttatta 155  Q
    ||||||| |||||| |||||||  |||||| |||   |||||||||| |||||| |||||| ||| || | | ||||| ||||||| | ||  |||||||    
T  21390204 ttagaaactaggtctaacataacgttctaggtttaatggtttggtttgtgaaggatttgtcgccatgacggatcaatactcccaaggctctcatttatta 21390303  T
Q  156 ttatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaata 254  Q
    ||||||| || |||||  ||||||||||||| ||| ||||||||||| ||||||||  |  | ||||||||||||| ||||||| | ||||||||| |||    
T  21390304 ttattttcaa-ccgttaaaaatcccaactttgcaacttaaactctct-ctaatcatcaactatagttaattgaattgaacaactacctgttggaacgata 21390401  T
Q  255 ctctcttattactac 269  Q
    ||||||| |||||||    
T  21390402 ctctctttttactac 21390416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 25485836 - 25485720
Alignment:
Q  174 aaatcccaacttttcaattaaa-ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatc 272  Q
    |||||| |||||||||| |||| |||| |||||||||||  | |||||||||||||||  | |||||||||| ||||| ||||||| |||||||||| ||    
T  25485836 aaatccaaacttttcaactaaaactcttttctaatcattattgaaagttaattgaatt-cataactccatgtcggaacgatactcttttattactacttc 25485738  T
Q  273 ggta-aactgtacacttg 289  Q
    |||| ||| |||||||||    
T  25485737 ggtagaaccgtacacttg 25485720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 23114787 - 23114882
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaa 141  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||  ||| ||||||||||| |||| | ||||| | ||||||||||||||||||||||    
T  23114787 gagaaacttgtctttagaaaatagatccaacgtaagatt-tatgtttagggtttggtttgtgaaagatttgttatcaagatgaaccaataatcccaa 23114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 22000075 - 21999975
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||||| || |||||||| |||| ||||    
T  22000075 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcaccatgacgaaccaatgatcctaaga 21999976  T
Q  144 c 144  Q
    |    
T  21999975 c 21999975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 21833458 - 21833683
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||| ||||||| |||||| ||||| |  || ||| |||   |||||||||| |||| | |||||| ||| || | |||||||||||||||     
T  21833458 gagaaacttgtccttagaaattaggtctaacatgaggttttaggtttaatggtttggtttgtgaaagatttgtcgccatgacggaccaataatcccaagg 21833557  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaat-taaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || |||||||| | |||| || |||||  ||| ||||||||| |||| | |||| ||| ||||||||  |  ||||||||||| ||||||||||| |     
T  21833558 ctctcttttattactgttttcaa-ccgttaaaaaccccaactttgcaatctgaactatct-ctaatcatcaagtaaagttaattgcattaaacaacttcc 21833655  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    ||| ||||| |||||||||| |||||||    
T  21833656 tgtcggaacgatactctctttttactac 21833683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 25742397 - 25742459
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  25742397 aaagttaattgaattaaacaactccgtgtcggaacgatactcttttcattactacttcggtaa 25742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 276
Target Start/End: Original strand, 22942875 - 22943114
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||| || | |||||||||||||||||||| |||||| |||||||| |||||| |||               |||| |||||||  | ||||    
T  22942875 gagatgtgatatgctaaagagaaacttgtctttagaaattaggtctaacataaagttctaggttt---------------aaggttttgtcattatgatg 22942959  T
Q  127 aaccaataatcccaagacgctttttattatta-----tttttaaaccgttttaaa-tcccaacttttcaattaaactctcttctaatcattcataaaagt 220  Q
    |||||||||||||||||| |||||||||||||     | ||| ||||  || |||  ||||||||| ||| | || ||||||||||||||  || |||||    
T  22942960 aaccaataatcccaagactctttttattattatattttctttcaaccaattgaaacacccaactttgcaacttaa-tctcttctaatcatcaattaaagt 22943058  T
Q  221 taattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||||| |||| |||  ||| ||||| ||||||| || ||||||| ||||||    
T  22943059 taattgaattgaacagctctctgtcggaacgatactctatttttactacttcggta 22943114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 23626222 - 23626142
Alignment:
Q  197 tctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||| ||  |||||||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  23626222 tctcttctaatcatctctaaaaagttaattgaattaaactactccctgtcggaacgatactctttta-tactacttcggtaa 23626142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 6406972 - 6407044
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||||||||||   || |||||||||| |||||||||||||| |||  |||| ||||||| ||||||||||    
T  6406972 tctcttctaatcacctattaaagttaattaaattaaacaactccctgtcagaacgatactcttttattactac 6407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 30758556 - 30758476
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  30758556 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 30758476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 30768661 - 30768581
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  30768661 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 30768581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 9728264 - 9728205
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    |||||||||||||||| ||||  ||| ||||| ||||||| |||||||||| ||||||||    
T  9728264 gttaattgaattaaactactctctgtcggaacgatactcttttattactacttcggtaaa 9728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 12322804 - 12322919
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||  ||||||||||| |||||| |||||||  |||||| |||  ||||| ||||| |||| | |||| |   | ||||||||||||||||||||     
T  12322804 gagaaaccggtctttagaaattaggtctaacataaggttctaggtttaaggttttggtttgtgaaagatttgccgttatgatgaaccaataatcccaagg 12322903  T
Q  144 cgctttttattattat 159  Q
    | ||||||||||||||    
T  12322904 ctctttttattattat 12322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 20167697 - 20167631
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac-gctttttattattatt 160  Q
    ||||||||| |||||| |||||| ||| || | |||||||||||||||||  |||||||||||||||    
T  20167697 gtttggtttgtgaaggatttgtcgccatgacggaccaataatcccaagacacctttttattattatt 20167631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 30730552 - 30730633
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  30730552 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 30730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 18610577 - 18610497
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  18610577 ctctcttctaatcatctctaaaggttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 18610497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 20246263 - 20246316
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    |||||| |||||||  || ||||||||||||||||||||||||| ||| |||||    
T  20246263 tctcttgtaatcatcaattaaagttaattgaattaaacaactccctgtcggaac 20246316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 24165785 - 24165881
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||||||  ||||| ||||| ||  || ||| |||||| |||| |||||| || || |  | ||||||||||||||||||||    
T  24165785 gagaaacttgtctttagaaagtaaatccaatataaagtttaaggtttagggttt-gtttgtgaaggattcgttattatgatgaaccaataatcccaag 24165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 13910717 - 13910797
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  13910717 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 13910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 19890423 - 19890518
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||||| |||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||  |||||||||| ||| ||||| || ||||||    
T  19890423 aaactcttttctaatcattgttgaaagttaattgaatt-cataactccctgtcggaacgatactcgtttattactacttcgataaaccgtgcacttg 19890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 20915377 - 20915314
Alignment:
Q  204 taatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattacta 268  Q
    ||||||||  |||||||||||||||||  | |||||||||| ||||| ||||||| |||||||||    
T  20915377 taatcattattaaaagttaattgaatt-cataactccatgtcggaacgatactcttttattacta 20915314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 25114700 - 25114620
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  25114700 tctcctctaatcattttcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 25114620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 25173792 - 25173712
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  25173792 tctcctctaatcattttcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 25173712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 45 - 274
Target Start/End: Original strand, 4541698 - 4541929
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||| ||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||||| || ||||||||||||||||| |    
T  4541698 gagaaacttgtctttaaaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaaggc 4541797  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaa-ttaaacaactccat 242  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||| |    
T  4541798 gctttttattattatttttaaactgttaaaaatcccaacttttcaactgaaactttcttctaatcattcataaaagttaattgaatttcaacaactccct 4541897  T
Q  243 gttggaacaatactctcttattactacatcgg 274  Q
     ||| ||||||||||| |||||||||| ||||    
T  4541898 attgaaacaatactcttttattactacttcgg 4541929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 45 - 282
Target Start/End: Complemental strand, 11483414 - 11483178
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||||| || |||||||||||||| |||| ||||||||||| ||| |    
T  11483414 gagaaacttgtctttagaaaataggtccaaaataaagttctaggtttagggtttggtttgtgtagggtttgtcaccatgatggaccaataatcctaaggc 11483315  T
Q  145 gcttt--ttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    |||||  |||||||| ||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||  |    
T  11483314 gcttttattattattgtttttaaaccg-ttaaaatcccaacttttcaactgaactctcttctaatcattcataaaagttaattgaattaaacaactctct 11483216  T
Q  243 gttggaacaatactctcttattactacatcggtaaactgt 282  Q
    || ||||| |||  |||||||||||||| |||||||||||    
T  11483215 gtcggaacgata--ctcttattactacaccggtaaactgt 11483178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 27 - 289
Target Start/End: Complemental strand, 4256189 - 4255928
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||||||||||||||||||||||| | |||||| |||||| ||| ||||||||||| |||||||||||||| ||||||     
T  4256189 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtcaatcataaagttctaggtttagggtttggtttttgaagggtttgtcatcaagatt 4256090  T
Q  127 aaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattg 226  Q
    ||| |||||||| | | ||||||||||||||| ||||||||||||  |||||| |||||||||| | ||||  |||||||| ||||||||||||||||||    
T  4256089 aactaataatccgagg-cgctttttattattacttttaaaccgttaaaaatcctaacttttcaactgaacttccttctaataattcataaaagttaattg 4255991  T
Q  227 aattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||||||||||| ||||||||| |||| |||||  |||||| ||||||||| || ||||||    
T  4255990 aattaaacaactccttgttggaacgataccctctttctactacttcggtaaaccgtgcacttg 4255928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 4982711 - 4982598
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||  ||||||||||| |||| |    
T  4982711 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaagggtttgtcaccatgacaaaccaataatctcaaggc 4982612  T
Q  145 gctttttattattat 159  Q
    || ||||||||||||    
T  4982611 gc-ttttattattat 4982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 8837093 - 8837201
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||||||||||||||||||| |||||||||||||| ||||| || ||| ||| ||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  8837093 cttaggagaaacttgtctttggaaagtaggtccaatataaagtt-taggtttagggtttg-tttgtgaagggtttgtcatcaagatgaaccaataatccc 8837190  T
Q  140 aagacgctttt 150  Q
    |||||| ||||    
T  8837191 aagacggtttt 8837201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 4460353 - 4460256
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||  |||||||||| |||||| |||||||||| || |||||||||||||||||    
T  4460353 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttaaggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaag 4460256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 15523557 - 15523654
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||  ||| | ||| |||||||||||||||||||||||||||    
T  15523557 gagaaacttgtctttagaaaataggtccaacataagattctaggtttagggtttggtttgcgaatgatttatcaccaagatgaaccaataatcccaag 15523654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 30063520 - 30063415
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||| |||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| || ||||||||||||||||| |    
T  30063520 gagaaacttgtcttttgaaaataggtccaacataaggttctaggtttagggtttggtttctgaaggatttgtcaccatgacgaaccaataatcccaaggc 30063421  T
Q  145 gctttt 150  Q
    ||||||    
T  30063420 gctttt 30063415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 39271688 - 39271933
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| |||   |||||||||| ||||||||||||| ||| || | |||||||||||||||     
T  39271688 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttaatggtttggtttgtgaagggtttgtcgccatgacggaccaataatcccaagg 39271787  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    | || ||||||||||| |||| ||  |||  ||| ||||| | | ||| | |||| ||||||||||||  |  ||||||||||||||| ||||||||| |    
T  39271788 ctctcttttattatta-ttttcaattgttaaaaaccccaattatgcaacttaact-tcttctaatcatcaactaaagttaattgaattgaacaactccct 39271885  T
Q  243 gttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    || ||||| ||||||| || ||||||| |||||| |||||| ||||||    
T  39271886 gtcggaacgatactctatttttactacttcggtagaactgtgcacttg 39271933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 17912118 - 17912212
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    ||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| || |||||||||||||||||    
T  17912118 aaacttgtctttagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaag 17912212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 12348502 - 12348598
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||| ||| | ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  12348502 gagaaacttgtctttagaaaatagatccaacgtaagatt-taggtttagtgtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaag 12348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 1614445 - 1614557
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||  || |||||||| |||||| |||||||  | |||||||||||||||||||      
T  1614445 gagaaacttgtctttagaaagtaggtctaacataaagttctaggtttaaggttttggtttgtgaaggatttgtcattatgatgaaccaataatcccaatg 1614544  T
Q  144 cgctttttattat 156  Q
    | |||||||||||    
T  1614545 ctctttttattat 1614557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 277
Target Start/End: Original strand, 12199723 - 12199958
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||| |||||||  |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||||  || | |||||| ||||||||     
T  12199723 gagaaacttgtatttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcaccgtgacggaccaatgatcccaagg 12199822  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattca-taaaagttaattgaattaaacaactcc 240  Q
    | || ||||||||||||||| || |||||| ||| ||| |||||| ||| | || ||||| ||||||||  | ||||||||||||||||| |||||||||    
T  12199823 ctctcttttattattattttcaa-ccgtttgaaaaccccaactttgcaacttaattctctcctaatcatcaactaaaagttaattgaattgaacaactcc 12199921  T
Q  241 atgttggaacaatactctcttattactacatcggtaa 277  Q
     ||||| ||| ||| | | |||||||||| |||||||    
T  12199922 ctgttgaaacgatattattttattactacttcggtaa 12199958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 17206111 - 17205997
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||| |||||||| ||||||||||||||| |||||| |||  ||||||||||||||||| |||||||||| ||  ||||||||||||||||||    
T  17206111 gagaaacttgtatttagaaaataggtccaacataaagttctaggttt-aggtttggtttatgaaggatttgtcaccatga-caaccaataatcccaagac 17206014  T
Q  145 -gctttttattattatt 160  Q
      |||||||||| ||||    
T  17206013 acctttttattactatt 17205997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 38877942 - 38878054
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    |||||||| ||||| || ||||| |||||||| ||||||| ||| || || ||||| |||||| |||||||| || |||||| ||||||||||| |||||    
T  38877942 aaacttgtttttaggaaataggttcaacataagattctaggtttaggattaggtttgtgaaggatttgtcactaaaatgaactaataatcccaatacgct 38878041  T
Q  148 ttttattattatt 160  Q
    |||||||||||||    
T  38878042 ttttattattatt 38878054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 9258174 - 9257976
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    ||||||||| |||||| |||||||||| |||  |||||| ||| |||| | |||||||||||  ||| ||| |||||||| ||| ||| |||||| |||     
T  9258174 gtttggtttgtgaaggatttgtcaccatgatagaccaatgatctcaaggctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 9258075  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    | || ||||||||||||||  || |||| |||||||||||| ||||||  ||| ||||| |||||||||| ||||||| ||| || ||| |||||||||    
T  9258074 ttaattctcttctaatcatcaattaaagctaattgaattaagcaactcactgtcggaacgatactctctttttactacttcgatagaaccgtacacttg 9257976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 9312079 - 9312277
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    ||||||||| |||||| |||||||||| |||  |||||| ||| |||| | |||||||||||  ||| ||| |||||||| ||| ||| |||||| |||     
T  9312079 gtttggtttgtgaaggatttgtcaccatgatagaccaatgatctcaaggctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 9312178  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    | || ||||||||||||||  || |||| |||||||||||| ||||||  ||| ||||| |||||||||| ||||||| ||| || ||| |||||||||    
T  9312179 ttaattctcttctaatcatcaattaaagctaattgaattaagcaactcactgtcggaacgatactctctttttactacttcgatagaaccgtacacttg 9312277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 261
Target Start/End: Complemental strand, 16896821 - 16896602
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||  |||||| ||| |||| | |||||||||| || | | |||| |||  ||| |    
T  16896821 gagaaacttgtctttagaaagaaggtctaacataaagttctaggtttaaggtttgatttgtgaatgatttgtcaccacgacggatcaatgatcttaaggc 16896722  T
Q  145 gctttttattattatt--tttaaaccgttttaaatc-ccaacttttcaat-taaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
     |||||  ||||||||  |||  ||| ||| ||| | |||||||| |||  |||||||| ||||||||||  | ||||||||||||||||||||||||||    
T  16896721 tcttttatttattattattttctaccatttgaaaactccaactttgcaacctaaactct-ttctaatcatcaacaaaagttaattgaattaaacaactcc 16896623  T
Q  241 atgttggaacaatactctctt 261  Q
    |||||| ||  ||||||||||    
T  16896622 atgttgaaatgatactctctt 16896602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 4465336 - 4465229
Alignment:
Q  52 ttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttt 151  Q
    ||||||||||||| ||||||||| ||||  || ||| ||| ||||||||||| |||||| |||||||||| || |||| ||||||||| |||||| ||||    
T  4465336 ttgtctttagaaaataggtccaaaataaggttttaggtttagggtttggtttgtgaaggatttgtcaccatgacgaactaataatccctagacgc-tttt 4465238  T
Q  152 attattatt 160  Q
    |||||||||    
T  4465237 attattatt 4465229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 8780003 - 8779901
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    |||||||||||||||||||||||||| |||||||| || ||| ||| |||||| |||| |||||||||||| |  | |||||||||||||||||||| ||    
T  8780003 agaaacttgtctttagaaagtaggtcaaacataaagtt-taggtttagggttt-gtttgtgaagggtttgttattatgatgaaccaataatcccaaggcg 8779906  T
Q  146 ctttt 150  Q
    |||||    
T  8779905 ctttt 8779901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 279
Target Start/End: Complemental strand, 8521717 - 8521481
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| || | | |||||||  |||||  |||   |||||||||| |||||| ||||||  |  || | |||||||||||||||     
T  8521717 gagaaacttgtctttagaaattatgactaacataaggttctaagtttaatggtttggtttgtgaaggatttgtcgtcgtgacggaccaataatcccaagg 8521618  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||| |||  | |  ||  ||||||||||||| ||| |||||| || ||||||||||  |  |||||||||||||||||||||||||     
T  8521617 ctctcttttattattactttctaccaattaaaaatcccaactttgcaacttaaac-cttttctaatcatcaactaaagttaattgaattaaacaactcct 8521519  T
Q  242 tgttggaacaatactctcttattactacatcggtaaac 279  Q
    ||| ||||| ||||||| |||||||||| | |||||||    
T  8521518 tgtcggaacgatactcttttattactactttggtaaac 8521481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 276
Target Start/End: Original strand, 46274637 - 46274860
Alignment:
Q  55 tctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttat 153  Q
    ||||||||||| | ||  |||||||| |||||| |||   ||||| ||| |||||| |||||||||| || | |||||| |||||||  |||| ||||||    
T  46274637 tctttagaaagaaagtataacataaagttctaggtttaaagtttgatttgtgaaggatttgtcaccacgacggaccaatgatcccaa--cgctcttttat 46274734  T
Q  154 tattatt--tttaaaccgttttaaatc-ccaacttttcaat-taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaa 249  Q
    |||||||  ||| |||||||| ||  | |||||||| |||| |||||||| ||||||||||  |  ||||||||||||| ||||||||||| ||||||||    
T  46274735 tattattattttcaaccgtttgaacactccaactttgcaatctaaactct-ttctaatcatcaaccaaagttaattgaactaaacaactccctgttggaa 46274833  T
Q  250 caatactctcttattactacatcggta 276  Q
    | ||||| || | ||||||| ||||||    
T  46274834 cgatactatcattttactacttcggta 46274860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 679062 - 678972
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataat 136  Q
    |||||||||||||||||||| ||| || ||| ||| ||| ||| ||| ||||||||||| |||| | |||||||||||||||||||||||||    
T  679062 gagaaacttgtctttagaaaatagatctaacgtaagatt-taggtttagggtttggtttgtgaaagatttgtcaccaagatgaaccaataat 678972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 278
Target Start/End: Complemental strand, 15205560 - 15205375
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat--tattatttttaaaccgttttaaatcccaacttttcaatt 192  Q
    ||||||||| ||||||  ||||||   ||||||||||||||||||||| | | ||||||  |||||||||| || ||||| ||| ||| |  || ||| |    
T  15205560 gtttggtttgtgaaggacttgtcatttagatgaaccaataatcccaaggctccttttatattattatttttcaatcgtttgaaaaccccaacttacaact 15205461  T
Q  193 aaactctcttctaatcattcataaaag-ttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
      | |||| ||||||||| ||| |||| ||||||||||||||| ||||| ||| ||||| ||||||| |||||||||| ||||||||    
T  15205460 cgattctcatctaatcat-catcaaaggttaattgaattaaactactccctgtcggaacgatactcttttattactacttcggtaaa 15205375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 16487904 - 16488070
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-t 191  Q
    |||||||||| |||| | |||||| ||| ||   ||||||||||||||| | || ||||||||||||||| || |||||  ||| ||||||||| ||| |    
T  16487904 ggtttggtttgtgaaagatttgtcgccatgacagaccaataatcccaag-ctctcttttattattattttcaa-ccgttaaaaaccccaactttgcaaat 16488001  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctctt 261  Q
    | |||||||| ||||||||  |  ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  16488002 tgaactctct-ctaatcatcaactaaagttaattgaattaaacaactccttgtcggaacgatactctctt 16488070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 21507580 - 21507728
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt-tattattat-ttttaaaccgttttaaatcccaa-cttttcaa- 190  Q
    |||||||||  |||||  ||||||  ||| |||||||||||||||||| | ||||| ||||||||| |||| |||||||| ||| ||||| |||| |||     
T  21507580 gtttggtttgagaaggaattgtcattaaggtgaaccaataatcccaaggctcttttatattattatcttttcaaccgtttgaaaacccaaactttgcaac 21507679  T
Q  191 ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    || | || ||||||||||||  ||||||||||||||||||||||||||||    
T  21507680 ttgatct-tcttctaatcatcaataaaagttaattgaattaaacaactcc 21507728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 8786842 - 8786740
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    |||||||||||||||||||||||||| || ||||| || ||| ||| |||||| |||| |||||||||||| |  | ||||||||||||||| |||| ||    
T  8786842 agaaacttgtctttagaaagtaggtcaaatataaagtt-taggtttagggttt-gtttgtgaagggtttgttattatgatgaaccaataatctcaaggcg 8786745  T
Q  146 ctttt 150  Q
    |||||    
T  8786744 ctttt 8786740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 1614959 - 1615037
Alignment:
Q  198 ctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||||||||  |  ||||||||||||||| ||||||||||||| ||||| ||||||| || ||||||| ||||||    
T  1614959 ctcttctaatcatcaactaaagttaattgaattgaacaactccatgtcggaacgatactctatttttactacttcggta 1615037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 2325389 - 2325283
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||| |||||| |||  ||||| ||||| ||||||  ||||||  | ||||||||||||||||| || | |||||||    
T  2325389 gtctttagaaattaggtctaacataaagttctaggtttaaggttttggtttgtgaaggacttgtcattaggatgaaccaataatcccgaggctcttttta 2325290  T
Q  153 ttattat 159  Q
    |||||||    
T  2325289 ttattat 2325283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 23292135 - 23292082
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||| |||||||    
T  23292135 aaagttaattgaattaaacaactccctgtcggaacgatactctctttttactac 23292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 48804827 - 48804910
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||||||  | ||| |||||||||||  | |||||| ||||||||| ||||||| |||||||||| |||||||    
T  48804827 aaactctcttctaatcattatttaaaattaattgaatt-cataactccctgttggaacgatactcttttattactacttcggtaa 48804910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 4295309 - 4295384
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| ||||||| || |||||||||    
T  4295309 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaagaccgtacacttg 4295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 13435387 - 13435494
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||| ||| |||||| |||  ||||| ||||| |||||| ||||||   | |||||||||||||||||||| | | |||||    
T  13435387 gtctttagaaattaggtctaacaaaaagttctaggtttaaggttttggtttgtgaaggatttgtcgttaggatgaaccaataatcccaaggctcctttta 13435486  T
Q  153 ttattatt 160  Q
    ||||||||    
T  13435487 ttattatt 13435494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 268
Target Start/End: Complemental strand, 37099864 - 37099793
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattacta 268  Q
    ||||||||||||||  | |||||||||||||||| ||||||| | ||| ||||| ||||||| |||||||||    
T  37099864 tctcttctaatcatcaacaaaagttaattgaatttaacaacttcctgtcggaacgatactcttttattacta 37099793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 48713979 - 48714078
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||| | |||||||| |||||  |||||||  |||||| |||  | |||| ||| |||||| ||||||| | |||||||||||||||||||||||    
T  48713979 gagaaacttatttttagaaattaggtataacataaggttctaggtttaagatttgttttgtgaaggatttgtcatctagatgaaccaataatcccaagac 48714078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 18274711 - 18274789
Alignment:
Q  199 tcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  18274711 tcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactacttcggtaa 18274789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 18288929 - 18289007
Alignment:
Q  199 tcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  18288929 tcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactacttcggtaa 18289007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 38878147 - 38878209
Alignment:
Q  227 aattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||| |||||||| |||||||||||||||||| || ||||||| ||||||||| || ||||||    
T  38878147 aattgaacaactcgatgttggaacaatactctatttttactacttcggtaaaccgtgcacttg 38878209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 39389267 - 39389491
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||||||||| || ||||| ||  || ||| ||||||| ||| |||||| || ||    | |||||||||||||| |||||||    
T  39389267 gagaaacttgtctttagaaagtaggtcaaatataaagttagaggtttagggtttg-tttgtgaaggattcgttgttatgatgaaccaataattccaagac 39389365  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaactttt-caattaaactctcttctaatcattca-taaaagttaattgaattaaacaactccat 242  Q
       ||||||||||| |||    |||||  |||||  | ||||| ||| | |||  ||||||||||||||  ||||||||| || |||||||||||||| |    
T  39389366 ttcttttattattaatttctt-ccgttaaaaatcaaacctttttcaactgaaccttcttctaatcattctctaaaagttagttaaattaaacaactccct 39389464  T
Q  243 gttggaacaatactctcttattactac 269  Q
    ||  |||| ||||||| ||||||||||    
T  39389465 gtcagaacgatactcttttattactac 39389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 12736342 - 12736403
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||| |||||||  | |||||||||||||||| ||||||||| ||||||||| |||||||    
T  12736342 tctcttataatcatcaacaaaagttaattgaatttaacaactccctgttggaacgatactct 12736403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 23293082 - 23293021
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   | |||||||||||||||||||||||||| ||| ||||| |||||||    
T  23293082 tctcttctaatcaccaacaaaagttaattgaattaaacaactccctgtcggaacgatactct 23293021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 48804477 - 48804594
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||  |||    ||||||||| ||||||||||||||  | |||| ||||||||||| |||     
T  48804477 gagaaacttgtctttagaagttaggtctaacataaggttctaagtttaatagtttggtttgtgaagggtttgtcattatgatgtaccaataatccgaagg 48804576  T
Q  144 cg-ctttttattattatt 160  Q
    || |||||||||||||||    
T  48804577 cgcctttttattattatt 48804594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 1464280 - 1464356
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcacca 121  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||  | |||| |||  |||| |||||||||||    
T  1464280 gagaaacttgtctttagaaagaaggtctaacataaagttctagatttaagttttgatttgagaagagtttgtcacca 1464356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 3375911 - 3375817
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||||| |||||||||||  | |||||||||| |||| |  |||||| ||| ||||| ||||||| |||||||||||||||||||| || ||||||    
T  3375911 aaactcttttctaatcattgttgaaagttaattaaattcat-aactccctgtcggaacgatactct-ttattactacatcggtaaaccgtgcacttg 3375817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 33610240 - 33610355
Alignment:
Q  34 gatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaat 133  Q
    ||||| |||| ||||||||||||||||||||||||||| || ||||| |  ||| ||| |||||| |||| |||||||||||| |  || ||||||| ||    
T  33610240 gatatgcttaagagaaacttgtctttagaaagtaggtcgaatataaagt--taggtttagggttt-gtttgtgaagggtttgttattaaaatgaaccgat 33610336  T
Q  134 a--atcccaagacgctttt 150  Q
    |  |||||||| |||||||    
T  33610337 aatatcccaaggcgctttt 33610355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 48800678 - 48800574
Alignment:
Q  154 tattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaat 253  Q
    |||||| ||| |||||||| ||| ||||||||| ||| |  | ||||||  ||||||  | |||||||||||||||| ||||||||||||| | ||| ||    
T  48800678 tattatctttcaaccgtttgaaaacccaactttgcaacttgattctcttacaatcatcaacaaaagttaattgaattgaacaactccatgtcgaaacgat 48800579  T
Q  254 actct 258  Q
    |||||    
T  48800578 actct 48800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 3210174 - 3210048
Alignment:
Q  135 atcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcataaaagttaattgaatta 231  Q
    |||||||||| |||||||||||  ||| ||| |||||||| ||| ||| |||||| ||| |  | ||| | ||||||||  | ||||||||||| |||||    
T  3210174 atcccaagactctttttattatattatctttcaaccgtttgaaaaccccaactttgcaacttgattctttactaatcatcaacaaaagttaattaaatta 3210075  T
Q  232 aacaactccatgttggaacaatactct 258  Q
    ||||||||||| | ||||| |||||||    
T  3210074 aacaactccatttcggaacgatactct 3210048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 3376069 - 3375974
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    ||||||||||||||||| |||||| |||||||  |||||| |||   |||| ||||| |||||| ||| |||||| || |||||||||||| ||||    
T  3376069 aaacttgtctttagaaattaggtctaacataaggttctaggtttaaaggttaggtttgtgaaggatttttcaccatgacgaaccaataatctcaag 3375974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 9562464 - 9562503
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattattatttt 162  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  9562464 gatgaaccaataatcccaaggctctttttattattatttt 9562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 14582614 - 14582689
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||  |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  14582614 tctaatcatttctaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 14582689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 19514931 - 19514884
Alignment:
Q  34 gatatacttaggagaaacttgtctttagaaagtaggtccaacataaaa 81  Q
    |||| ||||| |||||||||||| ||||||||||||||||| ||||||    
T  19514931 gatacacttaagagaaacttgtcattagaaagtaggtccaatataaaa 19514884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 20114422 - 20114481
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatact 256  Q
    ||||||||||||||  | |||||||||||||||| ||||||||| ||| ||||| |||||    
T  20114422 tctcttctaatcatcaacaaaagttaattgaatttaacaactccctgtcggaacgatact 20114481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 10838332 - 10838251
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  10838332 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 10838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20627633 - 20627695
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| |||  |||| ||||||| || |||||||| |||||||    
T  20627633 aaagttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaa 20627695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20631524 - 20631586
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| |||  |||| ||||||| || |||||||| |||||||    
T  20631524 aaagttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaa 20631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20636132 - 20636194
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| |||  |||| ||||||| || |||||||| |||||||    
T  20636132 aaagttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaa 20636194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20638004 - 20638066
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| |||  |||| ||||||| || |||||||| |||||||    
T  20638004 aaagttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaa 20638066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 22245842 - 22245749
Alignment:
Q  47 gaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaa 141  Q
    ||||||||||||||||||||  |||||| ||||| || ||| ||| ||||||| |||  ||||||||||||||   || | ||||||||||||||    
T  22245842 gaaacttgtctttagaaagtcagtccaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 22245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 39388496 - 39388577
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  39388496 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 39388577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 4313813 - 4313878
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatt 160  Q
    ||||||||| ||||||  ||||||   ||||||||||||||||||||  | |||||||||||||||    
T  4313813 gtttggtttgtgaaggacttgtcaattagatgaaccaataatcccaatgctctttttattattatt 4313878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 6711980 - 6711943
Alignment:
Q  126 gaaccaataatcccaagacgctttttattattattttt 163  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  6711980 gaaccaataatcccgagacgctttttattattaatttt 6711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 14753459 - 14753539
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  14753459 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 14753539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 25033859 - 25033818
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattattattttta 164  Q
    ||||||||||||||||| |||||||||||||| ||| |||||    
T  25033859 gatgaaccaataatcccgagacgctttttatttttaatttta 25033818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 4465188 - 4465097
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |||||||||||||||  ||| ||||||||||||| |  |||||| ||  ||||  ||| ||| |||||||||||||||||||| || ||||||    
T  4465188 tctcttctaatcattgttaagagttaattgaattcat-aactccctgccggaatgataatcttttattactacatcggtaaaccgtgcacttg 4465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 12388787 - 12388715
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    |||||||||||||||||||||| |||  |||| ||||||| || |||||||| ||||||| || |||||||||    
T  12388787 gttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaagaccgtacacttg 12388715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 12576499 - 12576578
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  12576499 tctcctctaatcattttcaaaggttaattgaattaaactactccctgtcggaacgatactctttta-tactacttcggtaa 12576578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 13652686 - 13652766
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  13652686 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacctcggtaa 13652766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 16759460 - 16759380
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  16759460 tctcctctaatcattttcaaaggttaattgaattaaactactccttgtcggaacgatactcttttcatactacttcggtaa 16759380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 40 - 278
Target Start/End: Original strand, 175433 - 175671
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||| | |||||||||||| |||||||||||||||||| |    
T  175433 cttaagagaaacttgtctttagaaagtaggtccaatataaatttctaggtttagggtttggtttgtaaagggtttgtcatcaagatgaaccaataatctc 175532  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    ||| |||||||||||||| |||||||| || || ||||  ||||||| ||| | ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  175533 aaggcgctttttattattctttttaaaacg-ttaaaattacaactttgcaactgaaactcttttctaatcatcaataaaagttaattgaattaaacaact 175631  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    || ||||||||| |||||||||| ||||||| ||||||||    
T  175632 ccttgttggaacgatactctctttttactacttcggtaaa 175671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 11922002 - 11921758
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| || ||| ||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |    
T  11922002 gagaaacttgtctttagaaa-taggtccaacataaagttataggtttagggtttggtttgtgaagggtttgtcaccatgacgaaccaataatcccaaggc 11921904  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaact---ctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    ||||||||||||| |||| ||||||||  |||||| |||||||||| ||||||    |||||||||||||||||| ||||||||||||| |||||||||     
T  11921903 gctttttattattgttttgaaaccgttaaaaatccaaacttttcaactaaactttcttcttctaatcattcataatagttaattgaattcaacaactccc 11921804  T
Q  242 tgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||| |||||||||   |||| ||||||| ||||||||| || ||||||    
T  11921803 tgtcggaacaata--gtctttttactacttcggtaaaccgtgcacttg 11921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 33330568 - 33330325
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||  |||||||||| ||||||  ||||||  | || |||||||| ||||||||||    
T  33330568 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttacggtttggtttgtgaaggaattgtcaaaatgacgaaccaattatcccaagac 33330469  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    |||||||||| ||||||| ||||||||  || || ||||||||||| | ||||||||||||||||||||||| ||||| ||| ||||  | |||||||||    
T  33330468 gctttttattgttattttcaaaccgttaaaactctcaacttttcaactaaaactctcttctaatcattcatagaagttgattaaatt-cataactccatg 33330370  T
Q  244 ttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | | ||| ||||||| |||||||||| ||||||||| || ||||||    
T  33330369 tcgaaacgatactct-ttattactacttcggtaaaccgtgcacttg 33330325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 38652684 - 38652876
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||| |||||||||| || |||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||     
T  38652684 cttaagagaaacttgtctttagaaagtgggtccaacattaagttctaggtttaaggtttggtttatgaagggtttgtcatcaagatgaaccaataatcct 38652783  T
Q  140 aagacg-ctttttattattatttt-taaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaatt 230  Q
    |||| | ||||||||||||||||| |||||| ||  ||||| |||||||  |||| |||| |||||||||| ||  | |||||||||||||||    
T  38652784 aagaagcctttttattattattttctaaaccattaaaaatcacaactttataatttaactttcttctaatccttattgaaagttaattgaatt 38652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 16953482 - 16953253
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| |||  ||||| ||||| ||||||||||||||  | |||||||||||||||||||||    
T  16953482 gagaaacttgtttttagaaagtaggtctaacataaagttctaggtttaaggttttggtttgtgaagggtttgtcattatgatgaaccaataatcccaaga 16953383  T
Q  144 cgctttttattattat-tttta----aaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    | |||||||||||||| |||||    |||||||  ||| ||||||||| ||| | |||| ||||||||||||  |  ||||||||||||||| |||||||    
T  16953382 ctctttttattattatattttatttcaaccgttgaaaaccccaactttgcaacttaact-tcttctaatcatcaactaaagttaattgaattgaacaact 16953284  T
Q  239 ccatgttggaacaatactctcttattactac 269  Q
    || ||| ||||| ||||| | || |||||||    
T  16953283 ccctgtcggaacgatactttatttttactac 16953253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 9192773 - 9193002
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||| | |||||| || ||| ||||| || ||| ||| ||||||||||| |||||||||||||||||||||||| ||||||||||||       
T  9192773 gagaaacttgtcttcaaaaagtaagttcaatataaagtt-taggtttagggtttggtttgtgaagggtttgtcaccaagatgaatcaataatcccaatgt 9192871  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgt 244  Q
    || |||||||||||||||  | ||| |  |||||| | |||| ||| | |||| ||||||||||||  |||||||||||||||||| ||||||| | |||    
T  9192872 gccttttattattattttcta-ccggtaaaaatccaatctttacaactgaactttcttctaatcatcaataaaagttaattgaattgaacaacttcctgt 9192970  T
Q  245 tggaacaatactctcttattactacatcggta 276  Q
     ||||| || ||||||| | ||||| ||||||    
T  9192971 aggaacgatgctctcttttcactacttcggta 9193002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 25190715 - 25190960
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  || ||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |    
T  25190715 gagaaacttgtctttagaaaataggtccaacataaggttttaggtttagggtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaaggc 25190814  T
Q  145 gctttttattattat------ttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
     | ||||||||||||      |||||||       |||||| | |||||||| || ||||||| ||||||||||||| |||||||||||||||  | |||    
T  25190815 ac-ttttattattatactttcttttaaa---aacaaaatccaatcttttcaacttgaactctcatctaatcattcatgaaagttaattgaatt-cataac 25190909  T
Q  238 tccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | | ||| ||||| ||||||| |||||||||| ||||||||| || ||||||    
T  25190910 ttcctgtcggaacgatactct-ttattactacttcggtaaaccgtgcacttg 25190960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 12345515 - 12345272
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||  ||||| |||||||| |||||| |||  |||||||||| |||||| |||||||||| |||||||||||||||||||  |    
T  12345515 gagaaacttgtctttagaaaaaaggtctaacataaagttctaggtttaaggtttggtttgtgaaggatttgtcaccatgatgaaccaataatcccaatgc 12345416  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    ||||||||||||||  ||| |||||||  ||| || | |||||||| || ||| ||| |||||||| || | || | ||||||||||    |||||| ||    
T  12345415 gctttttattatta-ctttcaaccgttaaaaacccaatcttttcaacttgaacactcatctaatcactcttgaacgctaattgaatt-cttaactccttg 12345318  T
Q  244 ttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | ||||| ||| ||| |||||||||| ||||||||| || ||||||    
T  12345317 tcggaacgataatcttttattactacttcggtaaaccgtgcacttg 12345272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 8561876 - 8561626
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| || |||||| |||||||||| || |||||||||||| |||| |    
T  8561876 gagaaacttgtctttagaaaataggtccaacataaaattctaggtttagggtttggattgtgaaggatttgtcaccatgacgaaccaataatctcaaggc 8561777  T
Q  145 -gctttttattattattttta--aaccgttt-----taaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaaca 235  Q
      ||||||||||||||| |||    || |||      |||||| |||||||||| | ||||||| |||||||||||  | |||||||||||||||  | |    
T  8561776 acctttttattattattgttatttcccatttaaaacaaaatccaaacttttcaactcaaactcttttctaatcattgttgaaagttaattgaatt-cata 8561678  T
Q  236 actccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||||||| ||||| ||| ||| ||||||||||||| |||||| || ||||||    
T  8561677 actccatgtcggaacgata-tct-ttattactacatcagtaaaccgtgcacttg 8561626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 5676000 - 5676115
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| ||| ||||||| ||| |||||| ||||| |||| || ||||||||||| |||||||    
T  5676000 gagaaacttgtctttagaaaataggtccaacataagattttaggtttagggtttgatttgtgaaggatttgttaccatgacgaaccaataattccaagac 5676099  T
Q  145 gctttttattattatt 160  Q
    |||| |||||||||||    
T  5676100 gcttattattattatt 5676115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 7197819 - 7197991
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaatta 193  Q
    ||||||||| | ||||||||||||||| || | |||||| |||||||| | || ||||||||||||| | || |||||  ||| ||||||||| |||||     
T  7197819 gtttggtttgtaaagggtttgtcaccatgacggaccaatgatcccaaggctctcttttattattattctcaa-ccgttaaaaaccccaactttgcaattg 7197917  T
Q  194 aactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattacta 268  Q
    |||||||| ||||||||  |  ||||||||||||||||||||||||| |||  |||| |||||||||| ||||||    
T  7197918 aactctct-ctaatcatcaagtaaagttaattgaattaaacaactccctgtcagaacgatactctctttttacta 7197991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 10731669 - 10731780
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    |||||||||||||||||| ||||| |||||||| |||||| |||  |||||| |||  |||||||||||||||| || | ||||||||||||||||| |     
T  10731669 aaacttgtctttagaaagaaggtctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaataatcccaagactc- 10731767  T
Q  148 ttttattattatt 160  Q
    |||||||||||||    
T  10731768 ttttattattatt 10731780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 10945438 - 10945549
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    |||||||||||||||||| ||||| |||||||| |||||| |||  |||||| |||  |||||||||||||||| || | ||||||||||||||||| |     
T  10945438 aaacttgtctttagaaagaaggtctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaataatcccaagactc- 10945536  T
Q  148 ttttattattatt 160  Q
    |||||||||||||    
T  10945537 ttttattattatt 10945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 17169316 - 17169434
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||| ||||||||||||||| ||| || ||||||| ||| ||| ||| | ||||||||| |||||| ||||||||||||||||||||||||||||||| |    
T  17169316 gagatacttgtctttagaaaatagatctaacataagatt-taggtttagtgtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaaggc 17169414  T
Q  145 gctttt--tattattatttt 162  Q
    | ||||  ||||||||||||    
T  17169415 gtttttaatattattatttt 17169434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 17174876 - 17174994
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||| ||||||||||||||| ||| || ||||||| ||| ||| ||| | ||||||||| |||||| ||||||||||||||||||||||||||||||| |    
T  17174876 gagatacttgtctttagaaaatagatctaacataagatt-taggtttagtgtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaaggc 17174974  T
Q  145 gctttt--tattattatttt 162  Q
    | ||||  ||||||||||||    
T  17174975 gtttttaatattattatttt 17174994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 289
Target Start/End: Original strand, 11325497 - 11325728
Alignment:
Q  66 taggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgc--tttttattattattttt 163  Q
    ||||||||||||| | |||||| ||| || ||||||||||||||| |||||||||| || ||||||||||||||||||| |  |||||||||||||| ||    
T  11325497 taggtccaacatacagttctaggtttagg-tttggtttatgaaggatttgtcaccatgacgaaccaataatcccaagacaccttttttattattattgtt 11325595  T
Q  164 a-aaccgtttt------aaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatac 255  Q
    |   || ||||      |||||| ||| |||||| | ||||||| |||||||||||  | ||||||||| |||||  | |||| | ||| ||||| ||||    
T  11325596 atttcccttttaaagcaaaatccaaacgtttcaactcaaactcttttctaatcattgttgaaagttaatggaatt-cataacttcctgtcggaacgatac 11325694  T
Q  256 tctcttattactacatcggtaaactgtacacttg 289  Q
    ||| |||||||||||||||||||| || ||||||    
T  11325695 tcttttattactacatcggtaaaccgtgcacttg 11325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 11902180 - 11902063
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||| ||| |||||| |||||||| |||||| |||  ||||| ||||| ||||||||||||||  | || |||||||||||||||||     
T  11902180 gagaaacttgtctttaaaaattaggtctaacataaagttctaggtttaaggttttggtttgtgaagggtttgtcattatgacgaaccaataatcccaagg 11902081  T
Q  144 cg-ctttttattattatt 160  Q
    || |||||||||||||||    
T  11902080 cgcctttttattattatt 11902063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 39042997 - 39042822
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-t 191  Q
    ||||||||||||||| | |||||| ||| || | ||||||||||||||| | || ||||||||||||||| || |||||  ||| ||||||||| ||| |    
T  39042997 ggtttggtttatgaaagatttgtcgccatgacggaccaataatcccaaggctctcttttattattattttcaa-ccgttaaaaaccccaactttgcaaat 39042899  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | |||||||| ||||||||  |  ||||||||||||||||||||||||  ||| ||||  |||||||||| |||||||    
T  39042898 tgaactctct-ctaatcatcaactaaagttaattgaattaaacaactcactgtcggaatgatactctctttttactac 39042822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 48642301 - 48642452
Alignment:
Q  121 aagatgaaccaataatcccaagacgctttttatt--attatttttaaaccgttttaaa-tcccaacttttcaattaaactctcttctaatcattcataaa 217  Q
    ||||||||||||| |||||||||| |||||||||  ||||| ||| |||||||| ||| |||||||||| ||| |    ||||||||||||||  | |||    
T  48642301 aagatgaaccaatgatcccaagactctttttattttattatctttcaaccgtttgaaaatcccaactttgcaacttgtttctcttctaatcatcaacaaa 48642400  T
Q  218 agttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | ||||||||||| ||||||||| ||| ||||| ||||| | ||||||||||    
T  48642401 atttaattgaatttaacaactccctgtcggaacgatactattttattactac 48642452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 8091396 - 8091217
Alignment:
Q  105 tgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttt-----taaaccgttttaaatccc-aacttttcaat-taaact 197  Q
    |||||| |||||||  | |||||||||||||||||||  | |||||||||||||| ||     | |||||||| ||| ||| |||||| |||  | || |    
T  8091396 tgaaggatttgtcattatgatgaaccaataatcccaaagctctttttattattatattctctttcaaccgtttgaaaaccccaactttgcaaacttaatt 8091297  T
Q  198 ctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||  |  ||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||| |||||||    
T  8091296 ctcttctaatcatcaactaaagttaattgaattgaacaactccatgtaggaacgatactcttttattactacttcggtaa 8091217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 18242901 - 18242981
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||| | || |||||||||| |||||||||||||| ||| ||||| ||||||| |||||||||| |||||||    
T  18242901 tctcttctaatcacttattaaagttaattaaattaaacaactccctgtcggaacgatactcttttattactacttcggtaa 18242981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 269
Target Start/End: Original strand, 9857722 - 9857970
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagat 125  Q
    |||||| ||||| || | ||||||||| |||||||||| |||||| |||||||  |||||| |||  ||||| |||||   |||| |||||||  | |||    
T  9857722 gagatgtgatatgctaaagagaaacttatctttagaaattaggtctaacataaggttctaggtttaaggttttggtttgcaaaggatttgtcattatgat 9857821  T
Q  126 gaaccaataatcccaagacgctttttattatt--atttt---taaaccgttttaaatcccaa-cttttcaattaaactctcttctaatcattcataaaag 219  Q
    ||||||||||||||||  | ||||||||||||  |||||   | ||||  || ||| ||| | |||| ||| | || ||||||||||||||  |  ||||    
T  9857822 gaaccaataatcccaaagctctttttattattgtattttctttcaaccaattgaaaaccctagctttgcaacttaa-tctcttctaatcatcaactaaag 9857920  T
Q  220 ttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||||||||| ||||||||| ||||||||| ||||||| || |||||||    
T  9857921 ttaattgaattgaacaactccctgttggaacgatactctatttttactac 9857970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 13622833 - 13622939
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||| ||| |||||| |||  ||||| ||||| |||||| |||||||  | |||||||||||||||||||| | |||||||    
T  13622833 gtctttagaaattaggtctaacaaaaagttctaggtttaaggttttggtttgtgaaggatttgtcattatgatgaaccaataatcccaaggctcttttta 13622932  T
Q  153 ttattat 159  Q
     ||||||    
T  13622933 ctattat 13622939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 269
Target Start/End: Original strand, 31594393 - 31594635
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| |||| ||| | |||||||||||||||||||||||  ||||| |||||||||| | ||| ||||||| ||| ||||||| |||| |   |||||    
T  31594393 gagatgtgatagactaaagagaaacttgtctttagaaagtaaatccaatataaaattctgg-tttagggtttg-tttgtgaagggcttgttatttagatg 31594490  T
Q  127 aaccaataatcccaagacgctttt-----tattattatttttaaaccgttttaaatcccaacttttcaattaaa-ctctcttctaatcattcataaaagt 220  Q
    |||||||||||||||  || ||||     ||||||| | ||| ||   ||  |||| | |||||||||| |||| |||| |||||||||||  |||||||    
T  31594491 aaccaataatcccaaagcgtttttatttttattattttcttttaa---ttaaaaattcaaacttttcaactaaaactcttttctaatcattgttaaaagt 31594587  T
Q  221 taattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||| |||| || |||||| |||  |||| ||||||| ||||||||||    
T  31594588 taattaaattcaa-aactccctgtcagaacgatactcttttattactac 31594635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 3771751 - 3771674
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtc 117  Q
    |||| ||||||||||| |||||||||||||||||| ||||| |||||| ||| | ||||| ||| |||||| ||||||    
T  3771751 cttaagagaaacttgtatttagaaagtaggtccaatataaacttctaggtttagagtttgttttgtgaaggatttgtc 3771674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 268
Target Start/End: Complemental strand, 39294 - 39071
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||| ||||||| || ||||| || | |  || ||||||| ||| |||||| || || |  | |||||| ||||||||||||| |    
T  39294 gagaaacttgtctttagaatgtaggtcaaa-ataaagttgtcggcttagggtttg-tttgtgaaggattcgttattatgatgaatcaataatcccaaggc 39197  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaac--ttttcaattaaactctcttctaatcattca-taaaagttaattgaattaaacaactcca 241  Q
     |||||||||||||||||    |||||  |||||  | |  ||||||| | |||| ||||||||||||||| ||||||||| || |||| ||||||||||    
T  39196 tctttttattattattttctt-ccgttaaaaatcaaaccctttttcaactgaactttcttctaatcattcactaaaagttagttaaattgaacaactcca 39098  T
Q  242 tgttggaacaatactctcttattacta 268  Q
    |||  |||| ||||||| | |||||||    
T  39097 tgtcagaacgatactctttcattacta 39071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 276
Target Start/End: Complemental strand, 12807664 - 12807510
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaac-ttttcaattaaactctcttctaatcatt-cataaaagt 220  Q
    |||||||||||||||||||| | ||||||||||||| ||||   |||||  |||||  | | ||||||| | |||  ||||||||||||| | |||||||    
T  12807664 gatgaaccaataatcccaaggctctttttattatta-ttttcttccgttaaaaatcaaacctttttcaactgaaccttcttctaatcattccctaaaagt 12807566  T
Q  221 taattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    || || |||| ||||||||| |||  |||| ||||||| ||||||||||| |||||    
T  12807565 tagttaaattgaacaactccctgtcagaacgatactcttttattactacaccggta 12807510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 9945491 - 9945693
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||   |||||| |||||||  |||||| |||    ||||||||| ||| || |||||||||| || | ||||||||||| |||     
T  9945491 gagaaacttgtctttagatgttaggtctaacataaggttctaggtttaatagtttggtttgtgatggatttgtcaccatgacggaccaataatcctaagg 9945590  T
Q  144 cgctttttattatta-----tttttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | |||||||||||||     | ||| ||||||||  |||| |||||||| ||| | || ||||||||||||||  |  ||||||||||||||| || |||    
T  9945591 ctctttttattattatattctctttcaaccgtttgaaaattccaactttgcaacttaattctcttctaatcatcaaccaaagttaattgaattgaataac 9945690  T
Q  238 tcc 240  Q
    |||    
T  9945691 tcc 9945693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 16227734 - 16227795
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   | |||||||||||||||||||||||||| ||| ||||| |||||||    
T  16227734 tctcttctaatcaccaacaaaagttaattgaattaaacaactccttgtcggaacgatactct 16227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 10559607 - 10559679
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| ||||||    
T  10559607 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactac 10559679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 10731875 - 10731950
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||||| ||||||||||  | ||||||||||||||| |  |||||| ||| |||||||||||||||| |||||||    
T  10731875 aaactctcatctaatcattatttaaagttaattgaatttat-aactccctgtcggaacaatactctctttttactac 10731950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 10945644 - 10945719
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||||| ||||||||||  | ||||||||||||||| |  |||||| ||| |||||||||||||||| |||||||    
T  10945644 aaactctcatctaatcattatttaaagttaattgaatttat-aactccctgtcggaacaatactctctttttactac 10945719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 15305942 - 15306022
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  15305942 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 15306022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 18984716 - 18984796
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||||||| ||||| ||||||| ||  |||||| |||||||    
T  18984716 tctcctctaatcattatcaaaggttaattgaattaaacgactccatgtcggaacgatactcttttcatactacttcggtaa 18984796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 15866827 - 15866888
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||| | |  |||||||||| |||||||||||||| ||| ||||| |||||||    
T  15866827 tctcttctaatcactaactaaagttaattaaattaaacaactccctgtcggaacgatactct 15866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 13883037 - 13882969
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttt 162  Q
    ||||||| || |||| | |||||||  | |||||||||| ||||||||| | |||||||||||||||||    
T  13883037 ggtttggattgtgaaagatttgtcattatgatgaaccaacaatcccaaggcactttttattattatttt 13882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 15259001 - 15258921
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  15259001 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttcatactacttcggtaa 15258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 27 - 276
Target Start/End: Complemental strand, 20224806 - 20224557
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagat 125  Q
    |||||||||||  || | |||||||||||||||| |||||||||| |||||||| |||||| |||   || ||||||| ||||||||||||||||| |||    
T  20224806 gagatgcgataggctaaagagaaacttgtctttaaaaagtaggtctaacataaagttctagatttaaaggcttggtttgtgaagggtttgtcaccatgat 20224707  T
Q  126 gaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaatt 225  Q
    | ||||| |||||||| | ||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  20224706 ggaccaacaatcccaataagctttttattattatttctacaccgttaaaaatcccaacttttcaattaaactctcttctaatcatcaataaaagtgaatt 20224607  T
Q  226 gaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||| ||||| | ||||| ||||| |||||||||| ||||||| ||||||    
T  20224606 gaatt-aacaatttcatgtcggaacgatactctctttttactacttcggta 20224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 8532422 - 8532650
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaa-ttctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||| |||||| |||| ||||||||||||||||| ||| ||||||||||||||||     
T  8532422 gagaaacttgtctttagaaaataggtccaacataaaagttctaggtttagggtttcgtttgtgaagggtttgtcaccatgatcaaccaataatcccaagg 8532521  T
Q  144 cgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    |||||||||||||| |||||||| ||||  |||| |||||||||||| | || | ||| |||||||||||||||||||||||||||| || ||||||       
T  8532522 cgctttttattattgtttttaaatcgttaaaaattccaacttttcaactgaaatttctcctaatcattcataaaagttaattgaattcaaaaactcc--- 8532618  T
Q  244 ttggaacaatactctcttattactacatcggtaaa 278  Q
      ||||| |||  ||||||||||||||||||||||    
T  8532619 -cggaacgata--ctcttattactacatcggtaaa 8532650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 27 - 269
Target Start/End: Original strand, 13418904 - 13419145
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||| ||| |||||||||||||||||| ||||| || ||| | | ||||||||||| ||||||||||||||||||||||    
T  13418904 gagatgtgataggcttaagagaaacctgtgtttagaaagtaggtccaatataaagtt-taggtatagggtttggtttgtgaagggtttgtcaccaagatg 13419002  T
Q  127 aaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattg 226  Q
    || ||||||||||||| ||||||||||||||  |||| |||||||  |||||| | |||| ||| | |||| |||||| |||||  ||||||||||| ||    
T  13419003 aatcaataatcccaaggcgctttttattattcattttcaaccgttaaaaatccaatctttacaactgaactttcttctgatcatcaataaaagttaactg 13419102  T
Q  227 aattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | || ||||||||| ||||||||| ||||| |||| |||||||    
T  13419103 agttgaacaactccctgttggaacgatactatctttttactac 13419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 17775315 - 17775558
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||| || ||||| ||||||||||||||| |||||| |||  |||| ||||| |||| | |||||||||| || |||||||||||| |||| |    
T  17775315 gagaaacttgttttgagaaaataggtccaacataaagttctaggtttaaggttgggtttgtgaaagatttgtcaccatgacgaaccaataatctcaaggc 17775414  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    |||||||||| ||||||| ||||||||  ||||||||| ||||||| | ||||||||||||||||||||||| ||||| ||| ||||  | |||||| ||    
T  17775415 gctttttattgttattttcaaaccgttaaaaatcccaagttttcaagtgaaactctcttctaatcattcatagaagttgattaaatt-tataactccgtg 17775513  T
Q  244 ttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | ||||| ||||| | |||||| ||| ||||||||| || ||||||    
T  17775514 tcggaacgatactat-ttattattacttcggtaaaccgtgcacttg 17775558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 19076616 - 19076859
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||| || ||||| ||||||||||||||| |||||| |||  |||| ||||| |||| | |||||||||| || |||||||||||| |||| |    
T  19076616 gagaaacttgttttgagaaaataggtccaacataaagttctaggtttaaggttgggtttgtgaaagatttgtcaccatgacgaaccaataatctcaaggc 19076715  T
Q  145 gctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    |||||||||| ||||||| ||||||||  ||||||||| ||||||| | ||||||||||||||||||||||| ||||| ||| ||||  | |||||| ||    
T  19076716 gctttttattgttattttcaaaccgttaaaaatcccaagttttcaagtgaaactctcttctaatcattcatagaagttgattaaatt-tataactccgtg 19076814  T
Q  244 ttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    | ||||| ||||| | |||||| ||| ||||||||| || ||||||    
T  19076815 tcggaacgatactat-ttattattacttcggtaaaccgtgcacttg 19076859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 17023770 - 17023884
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||    
T  17023770 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaagagtttgtcaccatgatgaactaataatcccaagac 17023869  T
Q  145 gctttttattattatt 160  Q
    | ||||||||||||||    
T  17023870 g-tttttattattatt 17023884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 8685404 - 8685290
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||||| || ||||||||||||| ||| |    
T  8685404 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatccaaaggc 8685305  T
Q  145 gctttttattattat 159  Q
    |||||||||||||||    
T  8685304 gctttttattattat 8685290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 17051254 - 17051379
Alignment:
Q  34 gatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaat 133  Q
    |||| ||||| |||||||||||||||||||||||||||| | ||||| || ||| ||| ||||||||||| |||||| ||||||| ||||||||||||||    
T  17051254 gatacacttaagagaaacttgtctttagaaagtaggtcctatataaagtt-taggtttagggtttggtttgtgaaggttttgtcatcaagatgaaccaat 17051352  T
Q  134 aatcccaagacgctttttattattatt 160  Q
    ||||||||||| |||||||||||||||    
T  17051353 aatcccaagacactttttattattatt 17051379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 11848428 - 11848185
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||  ||||||  |||||| ||| ||||||||||| | |||| |||||||||| || ||||||||||||||||| |    
T  11848428 gagaaacttgtctttagaaaataggtctgacataaggttctaggtttagggtttggtttgttaaggatttgtcaccatgacgaaccaataatcccaaggc 11848329  T
Q  145 gcttt--ttattattattt--ttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    |||||  ||||||||||||  ||||| |     |||||||||||||    || || |||||||||||||||  |||||||||||||||||  | ||||||    
T  11848328 gcttttattattattattttcttaaaac----aaaatcccaactttaactttgaattctcttctaatcattgttaaaagttaattgaatt-cataactcc 11848234  T
Q  241 atgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||| |||||||||   | |||||||||||||||||||| || ||||||    
T  11848233 ttgtcggaacaatatctttttattactacatcggtaaaccgtgcacttg 11848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 27407747 - 27407969
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    |||| ||||||||||||| ||||| |||||||| |||||| |||  |||||||||| ||||||||||||||||| |||  |||||||||| |||| | ||    
T  27407747 aaacctgtctttagaaagaaggtctaacataaagttctaggtttaaggtttggtttgtgaagggtttgtcaccatgatcgaccaataatctcaaggctct 27407846  T
Q  148 tt--ttattattatttttaaaccgttt-taaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatg 243  Q
    ||  ||||||||| |||| ||||||||  ||| ||||||||| ||| |||||  | ||| |||||||  |  ||||||||||||| | ||||||||||||    
T  27407847 tttattattatta-ttttcaaccgtttaaaaaccccaactttgcaacttaaa--cacttataatcatcaactaaagttaattgaagtgaacaactccatg 27407943  T
Q  244 ttggaacaatactctcttattactac 269  Q
    ||||||| |||||||||| |||||||    
T  27407944 ttggaacgatactctctttttactac 27407969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 22039363 - 22039473
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| |||  |||||||||| |||||| ||||||| |||||||||||||||||| |    
T  22039363 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttatggtttggtttgtgaaggttttgtcatcaagatgaaccaataatcac 22039461  T
Q  140 aagacgcttttt 151  Q
    ||||||||||||    
T  22039462 aagacgcttttt 22039473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 9774638 - 9774525
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||| |||||| ||| ||| ||| ||| ||||||||||| | |||| ||||||||||||||||||||||| |||||||||    
T  9774638 gagaaacttgtctttagaaaatagatccaacgtaagatt-taggtttagggtttggtttgtaaaggatttgtcaccaagatgaaccaatactcccaagac 9774540  T
Q  145 gctttttattattatt 160  Q
    | ||||||||||||||    
T  9774539 g-tttttattattatt 9774525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 14347638 - 14347413
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||| |||||||||||| |||||  |||||||  |||||| |||   |||||||||| |||||| |||||| ||| |||| |||||||||||||||     
T  14347638 gagaaacctgtctttagaaattaggtgtaacataaggttctaggtttaatggtttggtttgtgaaggatttgtcgccatgatggaccaataatcccaagg 14347539  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||| |||| |||||||  ||| ||||||||| ||| |||||||||| |||||||||  |  ||||||||||||||| ||||||||      
T  14347538 ctctcttttattatta-ttttcaaccgttaaaaaccccaactttgcaatttaaactctc-tctaatcatcaactaaagttaattgaattgaacaactctc 14347441  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    ||||||||  ||||| |||| |||||||    
T  14347440 tgttggaatgatactatctttttactac 14347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 11577309 - 11577196
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||| ||| || |||||||||||||||||      
T  11577309 gagaaacttgtctttagaaaataggtccaacataaggttctaggtttagggtttggtttgtgaaggatttgtcgccatgacgaaccaataatcccaaggt 11577210  T
Q  145 gctttttattattat 159  Q
    || ||||||||||||    
T  11577209 gc-ttttattattat 11577196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 40847007 - 40847243
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattct-agctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||  || ||||| || ||||||||||||||  | ||||||||||||||||||||     
T  40847007 gagaaacttgtctttagaaagtaggtctaacataaaattctaagtttaaggttttggcttgtgaagggtttgtcattatgatgaaccaataatcccaagg 40847106  T
Q  144 cgcttt--ttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    ||||||  || ||||||||||       ||  |||||| ||||||    | |||||||| ||||||||||| |||||||||||||||||  | ||||| |    
T  40847107 cgcttttatttttattattttcttttaattaaaaatccaaactttaatctcaaactctcatctaatcattcttaaaagttaattgaatt-cataactcga 40847205  T
Q  242 tgttggaacaatactc-tcttattactacatcggtaaa 278  Q
    ||| ||||| |||||| |||| ||||||| ||||||||    
T  40847206 tgtcggaacgatactcatctttttactacttcggtaaa 40847243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 42244121 - 42243989
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||| | |||    
T  42244121 gagatgtgataggcttaagagaaacttgtatttataaagtaggtccaacataaagttctaggtttagggtttggtttgtgaagggtttgtcacc-atatg 42244023  T
Q  127 aaccaat-aatcccaagacgctttttattattatt 160  Q
    ||||||| ||||||||  ||| |||||||||||||    
T  42244022 aaccaataaatcccaatgcgc-ttttattattatt 42243989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 14071193 - 14071039
Alignment:
Q  105 tgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat--tattatttttaaaccgttt-taaatcccaacttttcaattaaactctct 201  Q
    |||||| ||||||||||||| |||||||| |||||||||| ||||||||  |||||| ||| ||||||||  ||| ||||||||| ||| | || |||||    
T  14071193 tgaaggatttgtcaccaagacgaaccaatgatcccaagactctttttattatattatctttcaaccgtttgaaaaccccaactttgcaacttaattctct 14071094  T
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatact 256  Q
    |||||||||  || |||||||||| |||||||||||||  ||||| ||| |||||    
T  14071093 tctaatcatcaattaaagttaattaaattaaacaactctctgttgaaacgatact 14071039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 17210111 - 17210231
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| |||||| |||| |||||||||| |||  ||||||||||||| ||| |    
T  17210111 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttagggttt-gtttgtgaagggtttatcattaagatgaaccaatgatctc 17210208  T
Q  140 aagacgctttttattattatttt 162  Q
    ||| | |||||||||||||||||    
T  17210209 aaggctctttttattattatttt 17210231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 17389080 - 17389257
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    ||||||||| |||||| |||||||||| || | |||||| |||||||| | |||||||||||  ||| ||| |||||||| ||| ||| |||||| ||||    
T  17389080 gtttggtttgtgaaggatttgtcaccatgacggaccaatcatcccaaggctctttttattatattatctttcaaccgtttgaaaaccccaactttgcaat 17389179  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |  | ||||||||||||||  | |||||||||||||||||||||||||| | | | ||| ||| ||| ||||||||||    
T  17389180 ttgattctcttctaatcatcaacaaaagttaattgaattaaacaactccctatcgaaacgatattcttttattactac 17389257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 21264541 - 21264390
Alignment:
Q  121 aagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcataaa 217  Q
    |||| |||||||| |||||||||| |||||||||||  ||| ||| |||||||| ||| ||| |||||| ||| |  | ||||||||||||||  | |||    
T  21264541 aagaagaaccaatgatcccaagactctttttattatattatctttcaaccgtttgaaaaccccaactttgcaacttgattctcttctaatcatcaacaaa 21264442  T
Q  218 agttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||||||||||| ||||||| ||||| ||||| ||||||| ||||||||||    
T  21264441 agttaattgaatttaacaacttcatgtcggaacgatactcttttattactac 21264390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 19566553 - 19566328
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||| ||||||| |||||| ||||| |  || ||| |||   ||||||||||||||| | ||| || ||| || | |||||||||||||||     
T  19566553 gagaaacttgtccttagaaattaggtctaacatgacgttttaggtttaatggtttggtttatgaaagatttttctccatgacggaccaataatcccaagg 19566454  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || |||||||||| ||||||| || ||  ||| ||||||||| ||| || |||||||| ||||||||  |  ||||||||||||||||||||||||||    
T  19566453 ctctcttttattattgtttttaaccc-ttaaaaaccccaactttgcaaattgaactctct-ctaatcatcaactaaagttaattgaattaaacaactcca 19566356  T
Q  242 tgttggaacaatactctcttattactac 269  Q
    ||| ||||| | |||||||| |||||||    
T  19566355 tgtcggaacgacactctctttttactac 19566328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 277
Target Start/End: Original strand, 3213039 - 3213222
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaat- 191  Q
    |||||||||| |||| | |||||| ||| || |||||||||||||||| || || |||||||||| |||| || || ||  ||| ||||||||| ||||     
T  3213039 ggtttggtttgtgaaagatttgtcgccatgacgaaccaataatcccaaaactctcttttattattgttttcaa-ccattaaaaaccccaactttgcaatc 3213137  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    | |||||||| ||||||||  || |||||||||||||||||||||||||  ||  |||| ||||||| |||||||||| |||||||    
T  3213138 tgaactctct-ctaatcatcaattaaagttaattgaattaaacaactccccgtcagaacgatactcttttattactacttcggtaa 3213222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 269
Target Start/End: Complemental strand, 14137267 - 14137097
Alignment:
Q  99 ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaact 197  Q
    ||||||||||   |||||| ||| || | ||||||||||||||| | |||||||| |||||||| ||||  |   ||| ||||||||||||| || ||||    
T  14137267 ggtttatgaaaaatttgtcgccatgacggaccaataatcccaaggctctttttataattattttcaaacgttaaaaaaccccaacttttcaaattgaact 14137168  T
Q  198 ctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||| ||||||||  |   |||||||||||||||||||||||| ||| ||||| |||||||| |||||||||    
T  14137167 ctct-ctaatcatcaactgaagttaattgaattaaacaactccttgtcggaacgatactctcgtattactac 14137097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 250
Target Start/End: Original strand, 17766967 - 17767122
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaa 194  Q
    ||||||||| |||||| ||||||    |||| |||||||||||||||| | |||||||||||||| ||  |||| ||| ||| ||||||||| ||| |      
T  17766967 gtttggtttgtgaaggatttgtcgtttagataaaccaataatcccaaggctctttttattattatcttccaaccatttgaaaccccaactttgcaactcg 17767066  T
Q  195 actctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    | ||||||||||||||  || |||||||||||||||||  |||||| ||| |||||    
T  17767067 attctcttctaatcatcaattaaagttaattgaattaactaactccctgtcggaac 17767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 250
Target Start/End: Original strand, 19068287 - 19068442
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaa 194  Q
    ||||||||| |||||| ||||||    |||| |||||||||||||||| | |||||||||||||| ||  |||| ||| ||| ||||||||| ||| |      
T  19068287 gtttggtttgtgaaggatttgtcgtttagataaaccaataatcccaaggctctttttattattatcttccaaccatttgaaaccccaactttgcaactcg 19068386  T
Q  195 actctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    | ||||||||||||||  || |||||||||||||||||  |||||| ||| |||||    
T  19068387 attctcttctaatcatcaattaaagttaattgaattaactaactccctgtcggaac 19068442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 25055550 - 25055663
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||| |||||| |||   |||||  ||| ||||||||||||||||| |||| ||||||||| |||||     
T  25055550 gagaaacttgtctttagaaattaggtctaacataaagttctaggtttaaaggttttttttgtgaagggtttgtcaccatgatggaccaataattccaagg 25055649  T
Q  144 cgctttttattatt 157  Q
    | | ||||||||||    
T  25055650 ctccttttattatt 25055663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 2006565 - 2006725
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattatta-----tttttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataa 216  Q
    |||||||||||||||||||||| |||||||||||||     | ||| ||||||||  ||| ||||||||| ||| | || | ||||||||||||  |  |    
T  2006565 gatgaaccaataatcccaagactctttttattattatattctctttcaaccgtttgaaaaccccaactttgcaacttaattatcttctaatcatcaacta 2006664  T
Q  217 aagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||| ||||| ||  ||| ||||| ||||||| |||||||||| |||||||    
T  2006665 aagttaattgaattgaacaattctctgtcggaacgatactcttttattactacttcggtaa 2006725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 11826970 - 11826856
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||| |||||  ||||||| || ||| |||  |||||| ||| |||||||||| |||||| ||   |||||||||||||||||    
T  11826970 gagaaacttgtctttagaaagaaggtctgacataaagttttaggtttaaggtttgatttgtgaagggtttatcaccatgaccgaccaataatcccaagac 11826871  T
Q  145 gctttttattattatt 160  Q
     | |||||||||||||    
T  11826870 tc-ttttattattatt 11826856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 13605691 - 13605793
Alignment:
Q  174 aaatcccaacttttcaattaaa-ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatc 272  Q
    |||||| |||||||||| |||| |||| |||||||||||  | ||||||||||||||  |  |||||| ||| ||||||||||||| |||||||||||||    
T  13605691 aaatccaaacttttcaactaaaactcttttctaatcattattgaaagttaattgaatccat-aactccctgtcggaacaatactcttttattactacatc 13605789  T
Q  273 ggta 276  Q
    ||||    
T  13605790 ggta 13605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 14605253 - 14605410
Alignment:
Q  112 tttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatccc-aacttttcaa-ttaaactctcttctaatc 208  Q
    |||||| ||| || ||||||||||||||||| | || ||||| ||||||||| || |||||  ||| ||| |||||| ||| || |||||||| ||||||    
T  14605253 tttgtcgccatgacgaaccaataatcccaaggctctcttttaatattattttcaa-ccgttaaaaaaccccaactttgcaaattcaactctct-ctaatc 14605350  T
Q  209 attcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattacta 268  Q
    ||  |  ||||||||||||||||||||||||| | ||||||| |||||||||| ||||||    
T  14605351 atcaactaaagttaattgaattaaacaactccctattggaacgatactctctttttacta 14605410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 277
Target Start/End: Original strand, 13326423 - 13326608
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt-tattattattt-ttaaaccgttttaaatccc-aacttttcaat 191  Q
    ||||||||| ||||||  ||||||  |||||||| |||| || ||||| | ||||| ||||||||| | || |||||||| ||| ||| |||||| ||      
T  13326423 gtttggtttgtgaaggacttgtcatgaagatgaagcaatgattccaaggctcttttatattattatctattcaaccgtttgaaaaccccaactttacata 13326522  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |  | |||||||||||||   | |||||||||||||||||| ||||||| ||| | ||| ||||||| |||||||||| |||||||    
T  13326523 ttgattctcttctaatcaccaacaaaagttaattgaattaaccaactccctgtcgaaacgatactcttttattactacttcggtaa 13326608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 37977711 - 37977650
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||| ||||| |||||||    
T  37977711 tctcttctaatcatcaataaaagttaattgaattaaattactccatgtcggaacgatactct 37977650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 11940924 - 11941004
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  11940924 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactacttcggtaa 11941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 13135098 - 13135019
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||||||||| ||||||| ||| |||||| |||||||    
T  13135098 tctcttctaatcatctctaaaggttaattgaattaaactactccctgttggaacgatactctttta-tactacttcggtaa 13135019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 17051422 - 17051504
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||| || ||||||||||  |||||||||||||||||  | |||||| ||||||||| |||||||||| ||||||| ||||||    
T  17051422 aaactttcatctaatcattattaaaagttaattgaatt-cataactccctgttggaacgatactctctttttactacttcggta 17051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 2722645 - 2722730
Alignment:
Q  191 ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||| ||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||| |||||||    
T  2722645 ttaaactctcatctaatcattatttaaagttaattgaatt-cataactccctgtcggaacgatactcttttattactacttcggtaa 2722730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 3338130 - 3338037
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa-actgtacacttg 289  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| ||||||| ||||| ||||||    
T  3338130 tctcttctaatcattttcaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaagactgtgcacttg 3338037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 5688282 - 5688421
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaa 194  Q
    |||| |||| |||||| |||||||||| || | |||||| |||||||  | |||||||| ||||| ||| |||||||      ||||||||| ||| | |    
T  5688282 gtttcgtttgtgaaggatttgtcaccatgacggaccaatgatcccaatgctctttttat-attatctttcaaccgttc-----cccaactttgcaactta 5688375  T
Q  195 actctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    | | ||||||||||||  || |||||||||||||||||||||||||    
T  5688376 attatcttctaatcatcaattaaagttaattgaattaaacaactcc 5688421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 6237538 - 6237634
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |||||||| ||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||| ||||| ||||||||||| |||||| ||||||    
T  6237538 aaactctcatctaatcattatttaaagttaattgaatt-cataactccctgtcggaacgatactcttttattgctacatcggtagaactgtgcacttg 6237634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 7630844 - 7630905
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||||   ||| |||||||||||||||| ||||||||| ||||| |||||||    
T  7630844 tctcttctaatcatttccaaaggttaattgaattaaactactccatgtcggaacgatactct 7630905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 12192370 - 12192290
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||||  |||| ||||| | |||||||| ||||| ||| ||||| ||||||||||| |||||| |||||||    
T  12192370 ctctcttctaatcatttctaaaggttaactaaattaaactactccctgtcggaacgatactctctta-tactacttcggtaa 12192290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 13141709 - 13141630
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  13141709 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactctttta-tactacttcggtaa 13141630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 14444626 - 14444562
Alignment:
Q  214 taaaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||| ||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  14444626 taaaagttaattgaattgaacaactccctgtcggaacgatactcttttcattactacttcggtaa 14444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 15494703 - 15494788
Alignment:
Q  144 cgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaatt 230  Q
    ||||||||||||||||||| || |||||  |||||| | |||||||| |||||||||||||||||||||  |||| ||||||| ||||    
T  15494703 cgctttttattattattttcaa-ccgtta-aaatccaatcttttcaacttaaactctcttctaatcattgttaaaggttaattaaatt 15494788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 16034627 - 16034726
Alignment:
Q  46 agaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||| |||||||||  |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||  | || |||||||||||||||||||    
T  16034627 agaaacttttctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcattatgacgaaccaataatcccaagac 16034726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 18128424 - 18128269
Alignment:
Q  122 agatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagtt 221  Q
    |||||||||||  |||||||| | | |||||||||||| ||| || || || ||| ||| |  || ||| | || |||| ||||||||||   ||| |||    
T  18128424 agatgaaccaacgatcccaaggctccttttattattatctttcaatcgcttgaaaaccccaacttacaactcaattctcctctaatcattatcaaaggtt 18128325  T
Q  222 aattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  18128324 aattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 18128269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 25765326 - 25765219
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||| ||| |||||| |||  ||||| ||||| |||||| ||||||   | |||||||||||||||||||  | | |||||    
T  25765326 gtctttagaaattaggtctaacaaaaagttctaggtttaaggttttggtttgtgaaggatttgtcgttaggatgaaccaataatcccaatgctcctttta 25765227  T
Q  153 ttattatt 160  Q
    ||||||||    
T  25765226 ttattatt 25765219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 47975343 - 47975450
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||  |||||| |||  ||||| ||||| |||||| ||| |||  | |||||||||||||||||||| | | | |||    
T  47975343 gtctttagaaattaggtctaacataaggttctaggtttaaggttttggtttgtgaaggatttatcattatgatgaaccaataatcccaaggctcctatta 47975442  T
Q  153 ttattatt 160  Q
    ||||||||    
T  47975443 ttattatt 47975450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 15233672 - 15233614
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||| ||||| ||| | ||| ||||||| |||||||||| |||||||    
T  15233672 gttaattgaattaaactactccctgtcgtaacgatactcttttattactacttcggtaa 15233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 15572798 - 15572717
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  15572798 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 15572717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 17481077 - 17481238
Alignment:
Q  100 gtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaac 196  Q
    |||| |||||| ||||||   ||||||||| ||| |||||||| | |||||||||||  ||| ||  |||||||| ||| ||| |||||| ||  |  |     
T  17481077 gtttgtgaaggatttgtcgttaagatgaactaatgatcccaaggctctttttattatattatcttctaaccgtttgaaaaccccaactttgcatcttgat 17481176  T
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||  || |||||||||||||| ||||||| || ||| |||||| ||||||    
T  17481177 tctcttctaatcatcaattaaagttaattgaatcaaacaacaccctgtcggaacattactct 17481238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 20149879 - 20149759
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcat-aaaa 218  Q
    ||||||||||| |||||||| | | |||||||||  ||| ||| || ||||| ||| ||| |||||| ||| | || |||||||||||||| ||| ||||    
T  20149879 gatgaaccaatgatcccaaggctccttttattatattatctttcaatcgtttgaaaaccccaactttgcaacttaattctcttctaatcat-catcaaaa 20149781  T
Q  219 gttaattgaattaaacaactcc 240  Q
    |||||||||||||||| |||||    
T  20149780 gttaattgaattaaactactcc 20149759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 3244463 - 3244387
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactaca 270  Q
    ||||| || ||||||||||  |||||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||||    
T  3244463 aaactttcatctaatcattattaaaagttaattgaatt-cataactccctgtcggaacgatactcttttattactaca 3244387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 3249594 - 3249518
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactaca 270  Q
    ||||| || ||||||||||  |||||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||||    
T  3249594 aaactttcatctaatcattattaaaagttaattgaatt-cataactccctgtcggaacgatactcttttattactaca 3249518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 10141731 - 10141811
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  10141731 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 10141811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 10148337 - 10148417
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  10148337 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 10148417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 10159062 - 10158982
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  10159062 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 10158982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 10165723 - 10165643
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||| | |||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  10165723 ctctcttctaatcatctctaaaggttaactaaattaaactactccctgtcggaacgatactct-ttattactacttcggtaa 10165643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 12199010 - 12198930
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||| ||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  12199010 ctctcttctaatcatctctaaaggttaattaaattgaactactccctgtcggaacgatactct-ttattactacttcggtaa 12198930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 47975506 - 47975579
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    ||||||||||  ||||||||||||||||| || |||||| | ||||||| |||  ||||||||||||| ||||||||    
T  47975506 tctaatcattgttaaaagttaattgaattcaa-aactccctattggaacgata--ctcttattactacttcggtaaa 47975579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 10545844 - 10545764
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  10545844 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 10545764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 10850120 - 10850048
Alignment:
Q  199 tcttctaatcattca-taaaagttaattgaattaaacaactccatgttggaacaatactctcttattactaca 270  Q
    ||||||||||||||  ||||||||| || |||| || |||||| ||||| ||| ||||||| |||||||||||    
T  10850120 tcttctaatcattctctaaaagttagttaaattgaataactccctgttgaaacgatactcttttattactaca 10850048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 11869020 - 11869100
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  11869020 tctcctctaatcattaccaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 11869100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 11948702 - 11948782
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||  ||||  ||| ||||| ||||||| ||| |||||| |||||||    
T  11948702 tctcttctaatcatctctaaaggttaattgaattaaaatactctctgtcggaacgatactcttttaatactacttcggtaa 11948782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 13202207 - 13202131
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| ||||||||    
T  13202207 tctaatcatttccaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaaa 13202131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 15947910 - 15947982
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| ||||||    
T  15947910 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactac 15947982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 45 - 239
Target Start/End: Original strand, 21319955 - 21320150
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||| || |||||||||||||| || |||||||| |||||| |||   |||||||||| ||||||||||||||||| |||| |||||||||||||||     
T  21319955 gagaaaattctctttagaaagtagatctaacataaagttctaggtttaaaggtttggtttgtgaagggtttgtcaccatgatggaccaataatcccaagg 21320054  T
Q  144 cgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactc 239  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| |||||||||||| |||| |||||||||||||||||||||    
T  21320055 cgctttttattattatttctaaaccgttaaaaatcccaacttttcaattgaactctattctaatcattcttaaaggttaattgaattaaacaactc 21320150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 18008634 - 18008867
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||| || ||||||||||||||| |||||| ||| |||||||||||   ||||||||||||||| |||| ||||||||||||||| |    
T  18008634 gagaaacttgtctttaggaaataggtccaacataaagttctaggtttagggtttggtttgcaaagggtttgtcaccatgatggaccaataatcccaaggc 18008733  T
Q  145 gctttt--tattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    ||||||  ||||||| |||||||||||||  |||||||||||| |||| | ||||||||||||||||||| |||| |||||||||| ||||||||||| |    
T  18008734 gcttttaatattattgtttttaaaccgttaaaaatcccaacttctcaactgaactctcttctaatcattcgtaaaggttaattgaaataaacaactccct 18008833  T
Q  243 gttggaacaatactctcttattactacatcggtaaa 278  Q
     | ||||| |||  ||||| ||||||| ||||||||    
T  18008834 atcggaacgata--ctctttttactacttcggtaaa 18008867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 279
Target Start/End: Original strand, 24342417 - 24342649
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    ||||||||||||||||| ||||| |||| |||| |||| | ||| ||||||||||| |||||||||| |||||| || ||| |||||||||||||||| |    
T  24342417 aaacttgtctttagaaaataggttcaacgtaaagttcttggtttagggtttggtttgtgaagggtttatcaccatgacgaatcaataatcccaagacgtt 24342516  T
Q  148 ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaa-ttgaattaaacaactccatgtt 245  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||| ||||||||| |||     
T  24342517 ttttattattacttttaaaccgttaaaaatcccaacttttcaactgaaactcttttctaatcattcatagaagttaatttgaattcaacaactccctgtc 24342616  T
Q  246 ggaacaatactctcttattactacatcggtaaac 279  Q
     |||||||||||| |||||||||||  |||||||    
T  24342617 agaacaatactct-ttattactacactggtaaac 24342649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 27 - 289
Target Start/End: Original strand, 26854585 - 26854851
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| ||||||||||| |||| ||||||||| |||||||    
T  26854585 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtccaatataaagttttaggtttagggtttggtttgtgaaaggtttgtcatcaagatg 26854684  T
Q  127 aaccaataatcccaagacg----ctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagtt 221  Q
    ||| |||||||||||||||     ||||||||||| ||||||||||| || ||||| ||| ||| ||| | ||||||| ||||||||||  |||||||||    
T  26854685 aactaataatcccaagacgttttttttttattattctttttaaaccg-ttaaaatcacaaatttgcaactgaaactcttttctaatcatcaataaaagtt 26854783  T
Q  222 aattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||| ||||| ||||||||| ||||||||| ||| |||||| ||||||| | |||||||||| ||||||    
T  26854784 aatcgaattgaacaactccttgttggaacgataatctctttttactactttggtaaactgtgcacttg 26854851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 24059625 - 24059740
Alignment:
Q  174 aaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcg 273  Q
    ||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||    
T  24059625 aaatcccaacttttcaactaaacttttttctaatcattcataaaatttaattgaattaaacaactccctgttggaacaatactctctttttactacttcg 24059724  T
Q  274 gtaaactgtacacttg 289  Q
    |||||| || ||||||    
T  24059725 gtaaaccgtgcacttg 24059740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 19791785 - 19791596
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||| |||||| ||| || ||| || |||||||||||||| || |    
T  19791785 gagaaacttgtctttagaaagtaggtccaacataaaattctaggtttagcgtttgatttgtgaaggatttttcgccatgacgaaccaataatcccgaggc 19791686  T
Q  145 gctttttattattat--ttttaaaccgttttaaatcccaacttttcaa--ttaaactctcttctaatcattcataaaagttaattgaatt 230  Q
     |||||||||| |||  |||| |||||||  |||||| ||||||| ||  | ||||| |||||||||||||  |||||||||||||||||    
T  19791685 actttttattaatattattttcaaccgttaaaaatccaaactttttaatctcaaactttcttctaatcattgttaaaagttaattgaatt 19791596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 24221110 - 24220996
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| |||||| || ||||||||||||||||||||||||| || |    
T  24221110 gagaaacttgtctttagaaaataggtccaacataagattctaggtttagggtttggtttgtgaaggattggtcaccaagatgaaccaataatccctaggc 24221011  T
Q  145 gctttttattattatt 160  Q
    | ||||||||||||||    
T  24221010 g-tttttattattatt 24220996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 14161707 - 14161575
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||| |||||||||||| ||| |||||    
T  14161707 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtccaacataaagttctaggtttaggatttggtttgtgaagggtttgttacc-agatg 14161609  T
Q  127 aaccaat-aatcccaagacgctttttattattatt 160  Q
    ||||||| ||||||||  ||| |||||||||||||    
T  14161608 aaccaataaatcccaatgcgc-ttttattattatt 14161575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 22285526 - 22285760
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||||| || | |||||| |||||||      
T  22285526 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcaccatgacggaccaatgatcccaatg 22285625  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||||| | || |||||  ||| ||||||||| ||| || |||||||| ||||||||  |  ||||||||||||||||||||||||||    
T  22285626 ctctcttttattattattctcaa-ccgttgaaaaccccaactttgcaaattgaactctct-ctaatcatcaactaaagttaattgaattaaacaactcca 22285723  T
Q  242 tgttggaacaatactctcttattactacatcggtaaa 278  Q
    ||| | ||| |||||||||| ||||||| ||| ||||    
T  22285724 tgtcgaaacgatactctctttttactacttcgataaa 22285760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 24035266 - 24035443
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccca-acttttcaat 191  Q
    ||||||||| |||||| |||||||||| || |||||||| |||||||| | |||||||||||  ||| ||| |||||||| ||| |||  | ||| |||     
T  24035266 gtttggtttgtgaaggatttgtcaccatgacgaaccaatgatcccaaggctctttttattatattatctttcaaccgtttgaaaacccccagtttgcaac 24035365  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | || ||||||||||||||  | ||||||||| |||||| ||||||||| ||| ||||| ||||| | ||||||||||    
T  24035366 ttaattctcttctaatcatcaacaaaagttaactgaatttaacaactccctgtcggaacgatacttttttattactac 24035443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 23456116 - 23456229
Alignment:
Q  47 gaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg 145  Q
    |||||||||||||| ||| |||||| |||||||  |||||  |||  ||||| ||||| ||||||||||||||  | ||||||||||||||||||||||     
T  23456116 gaaacttgtctttaaaaattaggtctaacataatgttctatgtttaaggttttggtttgtgaagggtttgtcattatgatgaaccaataatcccaagact 23456215  T
Q  146 ctttttattattat 159  Q
    ||||||||||||||    
T  23456216 ctttttattattat 23456229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 289
Target Start/End: Complemental strand, 43835772 - 43835586
Alignment:
Q  106 gaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaactctctt 202  Q
    ||||| |||||||| | |||| |||||| ||||||||||  ||||||||||  ||| ||| |||||||| ||| ||| |||||| ||| | || ||||||    
T  43835772 gaaggatttgtcactatgatggaccaatgatcccaagact-tttttattatattatctttcaaccgtttgaaaaccccaactttgcaacttaattctctt 43835674  T
Q  203 ctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
     |||||||  || ||||||||||||||||||||||||  ||| ||||| |||||||||| ||||||| ||| || ||| |||||||||    
T  43835673 ttaatcatcaattaaagttaattgaattaaacaactctctgtcggaacgatactctctttttactacttcgatagaaccgtacacttg 43835586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 18230134 - 18229968
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||||||  |||||  ||||||  ||||||||||||| |||||||||| |||||||||||  ||| ||| |||||||| ||| ||| |||||| |||     
T  18230134 gtttggtttgagaaggacttgtcattaagatgaaccaatgatcccaagactctttttattatattatctttcaaccgtttgaaaaccccaactttgcaac 18230035  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |  | ||||||||||||||  | |||||||||||||||| ||||||||| ||| | ||| |||||||    
T  18230034 ttgattctcttctaatcatcaacaaaagttaattgaatttaacaactccctgtcgaaacgatactct 18229968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 1990046 - 1989949
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaa 141  Q
    |||||||||||||||||||| |||||| |||||||| || ||| |||   |||||||||| |||||| |||||||||| || ||||||||||||||||    
T  1990046 gagaaacttgtctttagaaattaggtctaacataaagttataggtttaaaggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaa 1989949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 277
Target Start/End: Complemental strand, 6570175 - 6569936
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  ||| || |||||||  |||||| |||    ||||||||| |||||| ||||||   | |||||||||||||||||||||    
T  6570175 gagaaacttgtctttagaagttagatctaacataaggttctaggtttaatagtttggtttgtgaaggatttgtcgttatgatgaaccaataatcccaaga 6570076  T
Q  144 cgctttttatta-----ttatttttaaaccgttttaaatcccaactttt-caattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | ||||||||||     |||| ||| |||||||| ||| ||| | |||| ||| | |  ||| ||||||| ||  |  ||||||||||||||| ||||||    
T  6570075 ctctttttattattatattatctttcaaccgtttgaaaaccccatttttgcaactgatttcttttctaattatcaactaaagttaattgaattgaacaac 6569976  T
Q  238 tccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||  ||| ||||| ||||||| |||||||||| |||||||    
T  6569975 tctctgtcggaacgatactcttttattactacttcggtaa 6569936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 15760111 - 15760228
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||   |||||| |||||||  |||||| |||    ||||||||| ||||||||||||||  | || ||||||||||||||||||    
T  15760111 gagaaacttgtctttagatgttaggtctaacataaggttctaggtttaatagtttggtttgtgaagggtttgtcattatgacgaaccaataatcccaaga 15760210  T
Q  144 cg-ctttttattattatt 160  Q
    || |||||||||||||||    
T  15760211 cgcctttttattattatt 15760228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 26013446 - 26013562
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagat 125  Q
    |||||| |||| ||| | |||||||||||||||||||| |||||| |||| ||  |||||| |||  |||||||| || || ||| |||||||||| |||    
T  26013446 gagatgtgatagactaaagagaaacttgtctttagaaattaggtctaacacaaggttctaggtttaagggtttggattgtggaggatttgtcaccatgat 26013545  T
Q  126 gaaccaataatcccaag 142  Q
    | |||||||||||||||    
T  26013546 ggaccaataatcccaag 26013562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 22818786 - 22818964
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta--ttattat-ttttaaaccgttt-taaatcccaacttttcaa 190  Q
    ||||||||| |||||| ||||||||||||| |||||||| |||||||| | |||||||   |||||| |||| |||| |||  ||| ||||||||| |||    
T  22818786 gtttggtttgtgaaggatttgtcaccaagacgaaccaatgatcccaaggctctttttagtatattatcttttcaaccatttgaaaaccccaactttgcaa 22818885  T
Q  191 ttaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
       || | |||| |||||||  || |||||||||| |||||||||||||  |||  |||| |||||||||| |||||||    
T  22818886 cctaattttcttttaatcatcaattaaagttaattaaattaaacaactcactgtcagaacgatactctctttttactac 22818964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 39730205 - 39730039
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt-tattattat-ttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||||||  |||||  ||||||  ||| |||||||||||||||||| | ||||| ||||||||| |||| |||||||| ||| ||| |||||| |||     
T  39730205 gtttggtttgagaaggacttgtcattaaggtgaaccaataatcccaaggctcttttatattattatcttttcaaccgtttgaaaaccccaactttgcaac 39730106  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |  | ||||||||||||||  | ||||||||||| |||| ||||||||  ||| ||||| |||||||    
T  39730105 ttgattctcttctaatcatcaacaaaagttaattaaatttaacaactctctgtcggaacgatactct 39730039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 18263774 - 18263706
Alignment:
Q  198 ctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattac 266  Q
    |||||||||||||  | |||||||||||||||||||||| ||| ||| ||||| ||||||| |||||||    
T  18263774 ctcttctaatcatcaacaaaagttaattgaattaaacaattccctgtcggaacgatactcttttattac 18263706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 6280280 - 6280393
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||||||  || || |||||||| | | ||| ||||||| ||| ||||||| |||| |   ||||||||||||||||||||| |    
T  6280280 gagaaacttgtctttagaaagtaaatcaaatataaaattatgg-tttagggtttg-tttgtgaagggcttgttatttagatgaaccaataatcccaaggc 6280377  T
Q  145 gctttttattattatt 160  Q
    | |||||||| |||||    
T  6280378 gttttttatttttatt 6280393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 42417893 - 42417818
Alignment:
Q  201 ttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||||  || ||||||||||||||| ||||||||  ||| ||||| ||||||| ||||||||||| |||||    
T  42417893 ttctaatcatcaattaaagttaattgaattgaacaactctctgtcggaacgatactcttttattactacaccggta 42417818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 1301672 - 1301610
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  1301672 aaagttaattgaattaaacaactccttgtcggaacgatactcttttcattactacttcggtaa 1301610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 14821899 - 14821961
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  14821899 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 14821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 18162715 - 18162788
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||||  ||||||||||||||||| |  |||||| ||| ||||||||||||| ||||||||||| |||||    
T  18162715 tctaatcattattaaaagttaattgaattcat-aactccctgtcggaacaatactcttttattactacaccggta 18162788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 20264054 - 20264136
Alignment:
Q  176 atcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||| ||| |  | ||||||||||||||  | |||||||||||||||| ||||||||| ||| ||||| |||||||    
T  20264054 atcccaactttgcaacttgattctcttctaatcatcaacaaaagttaattgaatttaacaactccctgtcggaacgatactct 20264136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20453004 - 20453066
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  20453004 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 20453066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 21050683 - 21050765
Alignment:
Q  176 atcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||| ||| |  | ||||||||||||||  | |||||||||||||||| ||||||||| ||| ||||| |||||||    
T  21050683 atcccaactttgcaacttgattctcttctaatcatcaacaaaagttaattgaatttaacaactccctgtcggaacgatactct 21050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 17503585 - 17503524
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||| | || |||||||||| |||||||||||||| ||| ||||| |||||||    
T  17503585 tctcttctaatcactaattaaagttaattaaattaaacaactccctgtcggaacgatactct 17503524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 18959789 - 18959950
Alignment:
Q  120 caagatgaaccaataatcccaagacgcttt--ttattattatttttaaaccgttttaaatcccaacttttcaa--ttaaactctcttctaatcattcata 215  Q
    ||||||||||||||||||||||||||||||  |||||| |||||| |  |  ||  |||||| ||||||  ||  |||||||||| ||||||||||  |     
T  18959789 caagatgaaccaataatcccaagacgcttttattattaatattttcattcaattaaaaatccaaactttctaatcttaaactctcatctaatcattattt 18959888  T
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaac 279  Q
    |||||||||||||||  | |||||  ||| ||||| ||||||| || |||||||| ||||||||    
T  18959889 aaagttaattgaatt-cataactctctgtcggaacgatactct-ttgttactacaacggtaaac 18959950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 40951636 - 40951556
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||||| |||| ||||||| |||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  40951636 ctctcttctaatcattcctaaaggttaattaaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 40951556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 27538155 - 27538235
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| | | |||||| |||||||    
T  27538155 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactctttcaatactacttcggtaa 27538235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 1989903 - 1989809
Alignment:
Q  182 acttttcaattaaa-ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||| |||| |||| |||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||| ||||||    
T  1989903 acttttcaactaaaactcttttctaatcattattgaaagttaattgaatt-cataactccttgtcggaacgatactcttttattactacttcggta 1989809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 20394096 - 20394155
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    |||||||||||||||| ||||| ||| ||||| || |||| |||||||||| ||||||||    
T  20394096 gttaattgaattaaactactccctgtcggaacgatgctcttttattactacttcggtaaa 20394155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 249
Target Start/End: Original strand, 23880223 - 23880421
Alignment:
Q  55 tctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat 153  Q
    |||||||||  ||||||||||||||  |||||| |||    |||||||||  |||||  ||||||  ||| |||||||||| ||||||| | ||||||||    
T  23880223 tctttagaagttaggtccaacataaggttctaggtttaatagtttggtttgagaaggacttgtcattaaggtgaaccaatagtcccaaggctctttttat 23880322  T
Q  154 --tattatttttaaaccgttttaaatccca-acttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaa 249  Q
      |||||| ||| |||| ||| ||| |||  ||||| ||| |  | |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||||    
T  23880323 attattatctttcaaccatttgaaaacccctactttacaacttgattctcttctaatcatccattaaagttaattaaatttaacaactccttgtcggaa 23880421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 38349375 - 38349234
Alignment:
Q  122 agatgaaccaataatcccaagacgctttttatt---attat-ttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcataa 216  Q
    ||||||||||||||||||||| | | |||||||   ||||| |||| |||||||| ||| ||| |||||| ||  |  | |||||||||||||   | ||    
T  38349375 agatgaaccaataatcccaaggctccttttatttatattatcttttcaaccgtttgaaaaccccaactttacatcttgattctcttctaatcaccaacaa 38349276  T
Q  217 aagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||||||||| ||| ||| ||||| |||||||    
T  38349275 aagttaattgaattaaacaattccctgtcggaacgatactct 38349234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 23694472 - 23694545
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||||  ||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||||||||| |||||    
T  23694472 tctaatcattattaaaagttaattgaattcat-aactccctgtcggaacgatactcttttattactacaccggta 23694545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 23904935 - 23905016
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  23904935 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 23905016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 23912789 - 23912870
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  23912789 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 23912870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 9318422 - 9318487
Alignment:
Q  96 tttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacg-ctttttattattatt 160  Q
    |||||||| |||||| |||||||  | |||||||||||||||||||| || ||||||||| |||||    
T  9318422 tttggtttgtgaaggatttgtcattatgatgaaccaataatcccaaggcgcctttttattgttatt 9318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 18821262 - 18821182
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||||| |||| ||||||| |||| ||| ||||| ||| ||||| ||| ||| ||| |||||| |||||||    
T  18821262 ctctcttctaatcattcctaaaggttaattaaattgaactactccctgtcggaacgataatctttta-tactacttcggtaa 18821182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 21328148 - 21328087
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   | |||| ||||||||||||||||||||| ||| ||||| |||||||    
T  21328148 tctcttctaatcaccaacaaaatttaattgaattaaacaactccctgtcggaacgatactct 21328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 21950817 - 21950878
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||   |||| |||||||||||| ||| ||||||||| ||||| |||||||    
T  21950817 tctcttctaatcatctctaaaggttaattgaattgaactactccatgtcggaacgatactct 21950878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 23503789 - 23503850
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||  |  |||||||||||| |||||||||||| ||| ||||| |||||||    
T  23503789 tctcttctaatcatcaactaaagttaattgacttaaacaactccctgtcggaacgatactct 23503850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 14877726 - 14877643
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||| || ||||||||||  ||||||||||||||| | |  |||||| ||| ||||| ||||||| ||||||||||| ||||||    
T  14877726 aaactttcatctaatcattattaaaagttaattgaactcat-aactccttgtcggaacgatactcttttattactacaccggtaa 14877643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 16417820 - 16417740
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  16417820 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 16417740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17515442 - 17515390
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataa 79  Q
    |||||| ||||  |||| |||||||||||||||||||| |||||| |||||||    
T  17515442 gagatgtgataggcttaagagaaacttgtctttagaaactaggtctaacataa 17515390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 20713708 - 20713788
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  20713708 tctcctctaatcattatcaaaggttaattgaattaaactactccttgtcggaacgatactcttttcatactacttcggtaa 20713788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 22725365 - 22725333
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtcc 72  Q
    |||| ||||||||||||||||||||||||||||    
T  22725365 cttaagagaaacttgtctttagaaagtaggtcc 22725333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 22831769 - 22831892
Alignment:
Q  121 aagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaa-tcccaacttttcaattaaactctcttctaatcattcataaa 217  Q
    |||||||| |||| |||||||| | |||||||||||  ||| ||| |||||||| ||| || ||||||| ||| |  | ||||||||||||||  | |||    
T  22831769 aagatgaatcaatgatcccaaggctctttttattatactatctttcaaccgtttgaaaatctcaactttgcaacttgattctcttctaatcatcaaaaaa 22831868  T
Q  218 a-gttaattgaattaaacaactcc 240  Q
    | |||||||||||| |||||||||    
T  22831869 aagttaattgaatttaacaactcc 22831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 24609628 - 24609382
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| | | ||||||||||||||||| |||| |||||| || | ||||||||| |||||||    
T  24609628 gagaaacttgtctttagaaaataggtccaacataaagttctaggtatagggtttggtttatgaagagtttctcaccatgacggaccaataattccaagac 24609529  T
Q  145 gcttt--ttattat--tatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    |||||  |||||||  | ||||||||  |||  ||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  24609528 gcttttcttattattgtttttttaaattgttaaaaatcccaacttttcaagtgaactgtcttctaatcattcataaaggttaattgaattaaacaactcc 24609429  T
Q  241 atgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||| |||||| ||  |||||||||||||| |||||||| || ||||||    
T  24609428 ctgtcggaacagta--ctcttattactacaccggtaaaccgtgcacttg 24609382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 21131636 - 21131431
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||| | |||||    
T  21131636 gagatgtgataggcttaagagaaaattgtctttagaaagtgggtccaacataaagttctaggtttagggtttggtttgtgaagggtttgtcatctagatg 21131537  T
Q  127 aaccaataatcccaagacg-ctttttattattatttttaaaccgtt-ttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaa 223  Q
    |||||||||||||||| || ||||||||||||| |||| |||||||   |||||| || ||||||| ||||||||| |||||||||||  | ||||||||    
T  21131536 aaccaataatcccaaggcgcctttttattatta-ttttcaaccgttaaaaaatccaaaattttcaacttaaactcttttctaatcattgttgaaagttaa 21131438  T
Q  224 ttgaatt 230  Q
    |||||||    
T  21131437 ttgaatt 21131431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 24365887 - 24365762
Alignment:
Q  34 gatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaat 133  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| |||||||||||  ||| | ||||||| ||||||||||||||    
T  24365887 gatatgcttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttagggtttggtttgggaaagttttgtcatcaagatgaaccaat 24365789  T
Q  134 aatcccaagacgctttttattattatt 160  Q
    ||||||||||| |||||||||||||||    
T  24365788 aatcccaagacactttttattattatt 24365762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 19012568 - 19012322
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| || |||| ||| |||||| |||||||||| || |||||||||||||||||||    
T  19012568 gagaaacttgtctttagaaaataggtccaacataaagttctaggtttagg-tttgatttgtgaaggatttgtcaccatgacgaaccaataatcccaagac 19012470  T
Q  145 gctttttattattatt--ttta-aaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
     |||||||||||| ||  ||||   |  ||  |||||| |||||||||| | ||||||| | |||||||||  | |||||||||||||||  | ||||||    
T  19012469 actttttattatttttactttatttcaattaaaaatccaaacttttcaactcaaactctttgctaatcattgttgaaagttaattgaatt-cataactcc 19012371  T
Q  241 atgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||   ||| ||||| | |||||||||||||||||||| || ||||||    
T  19012370 atgtcaaaacgatactattttattactacatcggtaaaccgtgcacttg 19012322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 269
Target Start/End: Complemental strand, 41653174 - 41652948
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| ||||||||||||||||||||||||||| || ||||| ||  || ||| ||||||| ||| ||||||||||||||   ||||||||||||||||||    
T  41653174 cttaagagaaacttgtctttagaaagtaggtcaaatataaagtt--aggtttagggtttg-tttgtgaagggtttgtcattgagatgaaccaataatccc 41653078  T
Q  140 aagacgctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatca--ttcataaaagttaattgaattaaacaac 237  Q
    | ||||||||||||||||| ||||    | ||  |||||  | |||| ||| | |||| |||||||||||  ||| |||||||||||| |||||||||||    
T  41653077 aggacgctttttattatta-ttttctttcattaaaaatcaaacctttacaactgaactttcttctaatcaacttc-taaaagttaattaaattaaacaac 41652980  T
Q  238 tccatgttggaacaatactctcttattactac 269  Q
    ||||||||| ||| |||||||||| |||||||    
T  41652979 tccatgttgaaacgatactctctttttactac 41652948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 24322326 - 24322575
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||| ||| ||||||||||||||  |||||| ||| ||||||||||| |||||| |||||||||| |||||||||||||||||||| |    
T  24322326 gagaaacttgtctttaaaaaataggtccaacataatgttctaggtttagggtttggtttgtgaaggatttgtcaccatgatgaaccaataatcccaaggc 24322425  T
Q  145 gctttttattattat------ttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaact 238  Q
    || ||||||||||||      ||||||| |   | ||||||   ||||| | || ||||||  | ||||||||  |||| |||||||||||| |  ||||    
T  24322426 gc-ttttattattatattttcttttaaatcaaataaaatccagccttttaacttgaactctaatataatcattgctaaaggttaattgaattcataaact 24322524  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
     ||||| ||||| ||| ||| |||||| ||||||||||||| || ||||||    
T  24322525 tcatgtgggaacgataatcttttattattacatcggtaaaccgtgcacttg 24322575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 16440287 - 16440421
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||| |||||||||| ||      
T  16440287 gagatgtgataggcttaagagaaacttgtctttagaaagtgggtccaacataaaattctaggtttagggtttggtttgtgaaggatttgtcaccatgaca 16440386  T
Q  127 aaccaataatcccaagac-gctttttattattatt 160  Q
    |||||||||||| ||| |  |||||||||||||||    
T  16440387 aaccaataatcctaaggcacctttttattattatt 16440421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 24370999 - 24370860
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||| |||| ||  ||||||| ||  | ||||||||| |||||| ||||||||||||||||||||||||||||||| |    
T  24370999 gagaaacttgtctttagaaaataggttcaacgtaggattctaggttgagagtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaaggc 24370900  T
Q  145 gcttt--ttattattatttttaaaccgttttaaatcccaa 182  Q
      |||  ||||||||| |||| |||||||  |||||||||    
T  24370899 atttttattattattaattttcaaccgttaaaaatcccaa 24370860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 28496387 - 28496161
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgg-gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||  |||||| |||||||  |||||| |||    ||||||||| | ||||||||||||||| || | |||||| ||||||||     
T  28496387 gagaaacttgtctttagaagttaggtctaacataaggttctaggtttaatagtttggtttgtaaagggtttgtcaccatgacggaccaatgatcccaagg 28496288  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatccc-aacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    | || ||||||||||||||| || |||||  ||| ||| |||||| ||| || |||||||| ||||||||  |  ||||||||||||||||||||||||     
T  28496287 ctctcttttattattattttcaa-ccgttaaaaaaccccaactttgcaaattgaactctct-ctaatcatcaactaaagttaattgaattaaacaactct 28496190  T
Q  241 atgttggaacaatactctcttattactac 269  Q
     ||||||||| |||||||||| |||||||    
T  28496189 ctgttggaacgatactctctttttactac 28496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 24177253 - 24177023
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| |||   |||||||||| ||||||||||||||  | ||||||| |||||||| |||     
T  24177253 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttaaaggtttggtttgtgaagggtttgtcattatgatgaacaaataatccaaagg 24177154  T
Q  144 cgctttttattatta-----tttttaaaccgttt-taaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaac 237  Q
    | |||||||||||||     | ||| || |||||  ||| ||||||||| ||| | |||| ||||||||||||  |  ||||||||||||||| ||||||    
T  24177153 ctctttttattattatattttctttcaatcgtttgaaaaccccaactttgcaacttaact-tcttctaatcatcaactaaagttaattgaattgaacaac 24177055  T
Q  238 tccatgttggaacaatactctcttattactac 269  Q
    ||| ||| ||||  ||||||| ||||||||||    
T  24177054 tccctgtcggaatgatactcttttattactac 24177023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 20773 - 20661
Alignment:
Q  178 cccaacttttcaatt-aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||| ||||| ||||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  20773 cccaactttgcaatttaaactct-ttctaatcatcaactaaagttaattgaattaaacaactccatgttggaacgatactctctttttactacttcggta 20675  T
Q  277 -aactgtacacttg 289  Q
     |||||| ||||||    
T  20674 gaactgtgcacttg 20661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 23797909 - 23797731
Alignment:
Q  105 tgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttt-----taaaccgttttaaatccc-aacttttcaattaaactc 198  Q
    |||||| |||||||  | |||||||||||||||||||| | |||||||||||||| ||     | |||||||| ||| ||| |||||| ||| |  | ||    
T  23797909 tgaaggatttgtcattatgatgaaccaataatcccaaggctctttttattattatattccctttcaaccgtttgaaaaccccaactttgcaacttgattc 23797810  T
Q  199 tcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||  |  ||||||||||||||| ||||||||| ||| ||||| ||||||| |||||||||| |||||||    
T  23797809 tcttctaatcatcaactaaagttaattgaattgaacaactccctgtcggaacgatactcttttattactacttcggtaa 23797731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 25803291 - 25803114
Alignment:
Q  105 tgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattattatttt-----taaaccgttttaaatccc-aacttttcaattaaactc 198  Q
    |||||| |||||||  | |||||||||||||||||||| | |||||||||||||| ||     | |||||||| ||| ||| |||||| ||| |  | ||    
T  25803291 tgaaggatttgtcattatgatgaaccaataatcccaag-ctctttttattattatattctctttcaaccgtttgaaaaccccaactttgcaacttgattc 25803193  T
Q  199 tcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||  |  ||||||||||||||| ||||||||| ||||||||| ||||||| |||||||||| |||||||    
T  25803192 tcttctaatcatcaactaaagttaattgaattgaacaactccttgttggaacgatactcttttattactacttcggtaa 25803114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 25038425 - 25038259
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatcccaa-cttttcaat 191  Q
    ||||||||| |||||| |||||||||| |||| |||||| |||||||| | |||||||||||  ||| ||  |||||||| ||| ||||| |||| |||     
T  25038425 gtttggtttgtgaaggatttgtcaccaggatggaccaatgatcccaaggctctttttattatattatattctaaccgtttgaaaacccaaactttgcaac 25038326  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |  | ||||||||||||||  | |||| ||||||||||| ||||||||| ||| ||||| |||||||    
T  25038325 ttgattctcttctaatcatcaacaaaaattaattgaattgaacaactccctgtcggaacgatactct 25038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 27074770 - 27074900
Alignment:
Q  148 ttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttgg 247  Q
    ||||||||||||||| || || ||  |||||| | |||| ||| |||||| ||||||||||||  || ||||||||||||||| ||||||||| ||||||    
T  27074770 ttttattattattttcaa-ccattaaaaatccaatctttacaactaaactttcttctaatcatcaattaaagttaattgaattgaacaactccctgttgg 27074868  T
Q  248 aacaatactctcttattactacatcggtaaac 279  Q
    ||| |||||||| | ||| ||| |||||||||    
T  27074869 aacgatactctcgttttattacttcggtaaac 27074900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 29576924 - 29576790
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagat 125  Q
    |||||| |||| ||| | |||||| ||||| |||||||||||||| |||||||| || ||| |||  ||||| ||||| ||||||||||||||  | |||    
T  29576924 gagatgtgatagactaaagagaaatttgtcattagaaagtaggtctaacataaagttataggtttaaggttttggtttgtgaagggtttgtcattatgat 29576825  T
Q  126 gaaccaataatcccaagacgc-tttttattattat 159  Q
    ||||||||||||||||| | | |||||||||||||    
T  29576824 gaaccaataatcccaaggctcttttttattattat 29576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 21344093 - 21343979
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||  |||||| |||  |||||||||||||||| || | |||||| |||| ||| |    
T  21344093 gagaaacttgtctttagaaagaaggtctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaatgatcctaaggc 21343994  T
Q  145 gctttttattattatt 160  Q
     | |||||||||||||    
T  21343993 tc-ttttattattatt 21343979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 23704810 - 23704924
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||  |||||| |||  ||||||||||| |||| || | ||||||||||| ||| |    
T  23704810 gagaaacttgtctttagaaagaaggtctaacataaagttctaggtttaaggtttgatttgagaagggtttgttaccatgacgtaccaataatcctaaggc 23704909  T
Q  145 gctttttattattatt 160  Q
     | |||||||||||||    
T  23704910 tc-ttttattattatt 23704924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 19121667 - 19121554
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||| |||||||||||| || ||| |||||||| |||||  ||| ||||||||||| |||||| |||||||| | || |||||||||||| |||| |    
T  19121667 gagaaacatgtctttagaaaataagtcaaacataaagttctaagtttagggtttggtttttgaaggatttgtcactatgacgaaccaataatctcaaggc 19121568  T
Q  145 gctttttattattat 159  Q
    |  ||||||||||||    
T  19121567 g-attttattattat 19121554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 22558386 - 22558276
Alignment:
Q  47 gaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgc 146  Q
    |||||||||||||||||| ||||| ||||||||  |||||| ||| ||||||||||| |||| | ||||||   | || ||| |||||||| ||| ||||    
T  22558386 gaaacttgtctttagaaaataggttcaacataaggttctagatttagggtttggtttgtgaaagatttgtctttatgacgaatcaataatcgcaaaacgc 22558287  T
Q  147 tttttattatt 157  Q
    |||||||||||    
T  22558286 tttttattatt 22558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 25858150 - 25858042
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||| |||| |||||| ||||||||||| ||||| || ||| ||| ||||||  ||| ||||||| |||||| ||||||||||||||||||||    
T  25858150 cttaagagaaaattgtttttagacagtaggtccaatataaagtt-taggtttggggtttc-tttgtgaagggcttgtcatcaagatgaaccaataatccc 25858053  T
Q  140 aagacgctttt 150  Q
    ||| |||||||    
T  25858052 aaggcgctttt 25858042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 30948813 - 30948698
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||||||||| || ||||| ||  || ||| ||||||| ||| |||||| || ||    | |||||||||||||||||||| |    
T  30948813 gagaaacttgtctttagaaagtaggtcaaatataaagttagaggtttagggtttg-tttgtgaaggattcgttgttatgatgaaccaataatcccaaggc 30948715  T
Q  145 gctttttattattattt 161  Q
     ||||||||||||||||    
T  30948714 tctttttattattattt 30948698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 20964 - 20851
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||  |||||| |||  | |||||||||||||| || | |||||| |||||||| |    
T  20964 gagaaacttgtctttagaaagaaggtctaacataaagttctagatttaaggtttgatttgag-agggtttgtcaccatgacggaccaatgatcccaaggc 20866  T
Q  145 gctttttattattatt 160  Q
     | |||||||||||||    
T  20865 tc-ttttattattatt 20851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 21343925 - 21343828
Alignment:
Q  178 cccaacttttcaatt-aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||| ||||| ||||||| |||||||||| ||  ||||||||||||||| ||||||||| |||||||| ||||||||||| ||||| | ||||||    
T  21343925 cccaactttgcaatttaaactct-ttctaatcat-caacaaagttaattgaattgaacaactccctgttggaataatactctctttttactgcttcggta 21343828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 25369823 - 25369625
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||| || |||||| |||||||||| || | |||||| |||||||| | |||||||||||  ||| ||| ||||| || ||| ||| |||||| |||     
T  25369823 gtttggcttgtgaaggatttgtcaccatgacggaccaatgatcccaaggctctttttattatattatctttcaaccgattgaaaaccccaactttgcaac 25369724  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    |  | |||||||| |||||  | |||||||||||||||| ||||| ||||||  ||||| | ||||| |||||||||| ||| || |||||| ||||||    
T  25369723 ttgattctcttcttatcatcaacaaaagttaattgaatttaacaattccatgccggaacgacactcttttattactacttcgatagaactgtgcacttg 25369625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 250
Target Start/End: Complemental strand, 23013978 - 23013820
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt-tattattat-ttttaaaccgttt-taaatcccaacttttcaat 191  Q
    |||||||||  ||||| |||||||  ||| |||||||||||||||||| | ||||| ||||||||| |||| ||||||||  ||| ||||||||| |||     
T  23013978 gtttggtttgagaaggatttgtcattaaggtgaaccaataatcccaaggctcttttatattattatcttttcaaccgtttgaaaaccccaactttgcaac 23013879  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    |  | ||||||||||||||  | ||||||||||| |||| | ||||||| ||| |||||    
T  23013878 ttgattctcttctaatcatcaacaaaagttaattaaatttaccaactccctgtcggaac 23013820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 250
Target Start/End: Complemental strand, 23018092 - 23017934
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttt-tattattat-ttttaaaccgttt-taaatcccaacttttcaat 191  Q
    |||||||||  ||||| |||||||  ||| |||||||||||||||||| | ||||| ||||||||| |||| ||||||||  ||| ||||||||| |||     
T  23018092 gtttggtttgagaaggatttgtcattaaggtgaaccaataatcccaaggctcttttatattattatcttttcaaccgtttgaaaaccccaactttgcaac 23017993  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    |  | ||||||||||||||  | ||||||||||| |||| | ||||||| ||| |||||    
T  23017992 ttgattctcttctaatcatcaacaaaagttaattaaatttaccaactccctgtcggaac 23017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 23649378 - 23649515
Alignment:
Q  122 agatgaaccaataatcccaagacgctttttattattatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcataaaagt 220  Q
    |||||||||||| |||||||| | | |||||||||   |||| |||||||| ||| ||| |||||| ||  |  | |||||||||||||   | ||||||    
T  23649378 agatgaaccaatgatcccaaggctccttttattatatcttttcaaccgtttgaaaaccccaactttacatcttgattctcttctaatcaccaacaaaagt 23649477  T
Q  221 taattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||||||||| ||| ||||| |||||||    
T  23649478 taattgaattaaacaactccctgtcggaacgatactct 23649515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 24507846 - 24507935
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    ||||||||||| |||||| |||||||| |||||| |||  ||||| ||||| ||||| ||||||||  | ||||||||||||||||||||    
T  24507846 gtctttagaaattaggtctaacataaagttctaggtttaaggttttggtttgtgaagagtttgtcattatgatgaaccaataatcccaag 24507935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 33182367 - 33182448
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||| | |  ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  33182367 tctcttctaatcactaactaaagttaattgaattaaacaactccttgtcggaacgatactcttttcattactacttcggtaa 33182448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 27767709 - 27767629
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  27767709 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactacttcggtaa 27767629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 36684843 - 36684946
Alignment:
Q  57 tttagaaagtaggtccaacataaaattctagctttcgggttt-ggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttatta 155  Q
    |||||||| |||||| |||||||  |||||| |||  ||||| ||||| |||||| ||||||   | |||||||||||||||||||| | ||||||||||    
T  36684843 tttagaaattaggtctaacataaggttctagatttaaggttttggtttgtgaaggatttgtcgttatgatgaaccaataatcccaaggctctttttatta 36684942  T
Q  156 ttat 159  Q
    ||||    
T  36684943 ttat 36684946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 44998926 - 44999020
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacactt 288  Q
    |||||||  ||||||||||  | |||||||||||||||  | |||||| ||| ||||| ||||||| |||||||||| ||||||||| ||||||||    
T  44998926 aaactctaatctaatcattatttaaagttaattgaatt-cataactccctgtcggaacgatactctattattactacttcggtaaaccgtacactt 44999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 11317603 - 11317541
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  11317603 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 11317541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 18993924 - 18993767
Alignment:
Q  121 aagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaattaaactctcttctaatcattcataaa 217  Q
    ||||| ||||||| |||||||| | |||||||||||  ||| ||| |||||||| ||| ||| |||||| ||| |  ||| ||||||||||||  |  ||    
T  18993924 aagattaaccaatgatcccaaggctctttttattatactatctttcaaccgtttgaaaaccccaactttgcaacttgactatcttctaatcatcgactaa 18993825  T
Q  218 agttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggt 275  Q
    ||||||||||||| | ||||||| ||| ||||| |||||||  | ||||||| |||||    
T  18993824 agttaattgaatttagcaactccttgtcggaacgatactcttattttactacttcggt 18993767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 276
Target Start/End: Original strand, 27745603 - 27745831
Alignment:
Q  54 gtctttagaaagtaggtccaacataaaattctagctttcgggtttg-gtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgcttttta 152  Q
    ||||||||||| |||||| |||||||  |||||| |||  |||||  |||| |||||| ||||||  || ||||| ||||||||| |||| | |||||||    
T  27745603 gtctttagaaattaggtctaacataaggttctaggtttaaggttttagtttgtgaaggatttgtcgtcatgatgagccaataatctcaaggctcttttta 27745702  T
Q  153 ttattattttt------aaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttg 246  Q
    ||||||| |||      || |  ||  ||| ||||||||| ||| | || ||||||||||||||  |  ||||||||||||||| ||||||||  ||| |    
T  27745703 ttattatattttctttcaaccaattgaaaaccccaactttgcaacttaa-tctcttctaatcatcaactaaagttaattgaattgaacaactctctgtcg 27745801  T
Q  247 gaacaatactctcttattactacatcggta 276  Q
    |||| ||||||| || ||||||| ||||||    
T  27745802 gaacgatactctatttttactacttcggta 27745831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 21201601 - 21201681
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   |||||||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  21201601 tctcctctaatcattatcaaaagttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 21201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 22438026 - 22438082
Alignment:
Q  220 ttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||||||||||||||||| ||||| ||| ||||||| || ||||||| ||||||    
T  22438026 ttaattgaattaaacaactccctgttgaaacgatactctttttttactacttcggta 22438082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 22043532 - 22043438
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| ||||||| || |||||||||    
T  22043532 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaagaccgtacacttg 22043438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 36684984 - 36685066
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||| ||||||||||  | |||||||||||||||  | |||||| ||| ||||| |||||||||| ||||||| ||||||    
T  36684984 aaactctcatctaatcattatttaaagttaattgaatt-cataactccctgtcggaacgatactctctttttactacttcggta 36685066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 23158275 - 23158194
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  23158275 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 23158194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 23569532 - 23569451
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  23569532 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 23569451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 24172705 - 24172767
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||| || |||||||| |||||||    
T  24172705 aaagttaattgaattaaacaactctctgtcggaacgatactcttttcattactacttcggtaa 24172767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 24507988 - 24508069
Alignment:
Q  194 aactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||||| ||||||||||  | ||||||||||||||| |  |||||||||| | ||| ||||||| || ||||||||||||||    
T  24507988 aactctcatctaatcattgttgaaagttaattgaattcat-aactccatgtcgaaacgatactctatttttactacatcggta 24508069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 27616124 - 27616205
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  27616124 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 27616205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 27632820 - 27632901
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  27632820 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 27632901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 29952177 - 29952211
Alignment:
Q  123 gatgaaccaataatcccaagacgctttttattatt 157  Q
    ||||||||||||||||| |||||||||||||||||    
T  29952177 gatgaaccaataatcccgagacgctttttattatt 29952211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 21872374 - 21872321
Alignment:
Q  223 attgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||| ||||||||||||| ||||| ||||||| || ||||||| ||||||    
T  21872374 attgaattgaacaactccatgtcggaacgatactctatttttactacttcggta 21872321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 23634628 - 23634689
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   | |||||||||||||||||||||||||| ||| ||||  |||||||    
T  23634628 tctcttctaatcaccaacaaaagttaattgaattaaacaactccttgtcggaatgatactct 23634689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 25143652 - 25143591
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||||||  |  || |||||||||||||||||||||| ||| ||||| |||||||    
T  25143652 tctcttctaatcatcaactaaggttaattgaattaaacaactccctgtcggaacgatactct 25143591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 27622267 - 27622347
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  27622267 ctctcttctaatcatctctaaaggttaattaaattaaactactccctgtcggaacgatactctttta-tactacttcggtaa 27622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 27628912 - 27628992
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  27628912 ctctcttctaatcatctctaaaggttaattaaattaaactactccctgtcggaacgatactctttta-tactacttcggtaa 27628992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 40916298 - 40916237
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat 156  Q
    |||||||||  |||||  ||||||  ||||||||||||| |||||||||| |||||||||||    
T  40916298 gtttggtttgagaaggacttgtcattaagatgaaccaatgatcccaagactctttttattat 40916237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 18446132 - 18446052
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| |   ||||| ||||||| ||| |||||| |||||||    
T  18446132 tctcttctaatcatctctaaaggttaattgaattaaactactccctaacggaacgatactcttttaatactacttcggtaa 18446052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 22872132 - 22872212
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  22872132 tctcctctaatcattaccaaaggttaattgaattaaactactccttgtcggaacgatactcttttcatactacttcggtaa 22872212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 23162845 - 23162777
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttat 263  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||||    
T  23162845 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactcttttat 23162777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 23574102 - 23574034
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttat 263  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||||    
T  23574102 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactcttttat 23574034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 29585201 - 29585280
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| ||||||| |||||||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  29585201 tctcttctaatcatttccaaaggttaattaaattaaactactccttgtcggaacgatactctttta-tactacttcggtaa 29585280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 14596 - 14856
Alignment:
Q  28 agatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatga 127  Q
    ||||| |||| ||| | |||||||||||||||||||| ||||||||||||||| |||||| ||| || |||||||| |||||| |||||||||| || ||    
T  14596 agatgtgatagactaaagagaaacttgtctttagaaaataggtccaacataaagttctaggtttaggatttggtttgtgaaggatttgtcaccatgacga 14695  T
Q  128 accaataatcccaagacgctttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattg 226  Q
    |||||||||||||||   |||||| ||||| |||| ||||||||  ||||||||||||||||| | ||||||||||||||||||||||| ||||| |||     
T  14696 accaataatcccaaggaactttttcttatttttttcaaaccgttaaaaatcccaacttttcaactgaaactctcttctaatcattcatagaagttgatta 14795  T
Q  227 aattaaacaactccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    ||||  | |||||| ||| ||||| ||||||| ||||| |||| ||  |||||||| ||||||    
T  14796 aatt-cataactccctgtcggaacgatactct-ttattgctacttctctaaactgtgcacttg 14856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 27 - 269
Target Start/End: Complemental strand, 53811 - 53569
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| |||||||||||| ||||||||| |||| || ||||| |||||| ||| ||||||||||| |||||| ||||||| |||||||    
T  53811 gagatgtgataggcttaagagaaacttgtccttagaaagtgggtctaatataaagttctagatttagggtttggtttgtgaaggatttgtcaacaagatg 53712  T
Q  127 aaccaataatcccaagacg-ctttttattattatttttaaaccgttttaaatcccaacttttcaattaaactctcttctaatcattcataaaagttaatt 225  Q
    ||||||||| || |||  | ||||||||||||| |||| |||||||  |||||| |||||||||| | |||| ||||||||||||  |||||||||||||    
T  53711 aaccaataaccctaaggtgcctttttattatta-ttttcaaccgttaaaaatcctaacttttcaactgaactttcttctaatcatcaataaaagttaatt 53613  T
Q  226 gaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||| ||||| ||| | ||||||  |||||||||| |||||||    
T  53612 gaattgaacaaatccctcttggaatgatactctctttttactac 53569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 22295 - 22048
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||| ||||||||||||||||||||||||||||  |||||| ||| |||||| | || |||||| |||||||||| || ||||||||||||||||| |    
T  22295 gagaaatttgtctttagaaagtaggtccaacataaggttctaggtttagggttttgcttgtgaaggatttgtcaccatgacgaaccaataatcccaaggc 22196  T
Q  145 gctttttattattatttttaaaccgtttt----aaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactc 239  Q
     | |||||| |||||| |||     ||||    |||  | |||||||||| || ||||||||||||||||||  | |||||||||||||||  | |||||    
T  22195 tc-ttttataattattgttattttcttttaaacaaaatctaacttttcaacttgaactctcttctaatcattgttgaaagttaattgaatt-cataactc 22098  T
Q  240 catgttggaacaatactctctt-attactacatcggtaaactgtacacttg 289  Q
    | ||| ||||||||| ||| || |||||||||||||||||| || ||||||    
T  22097 cctgtcggaacaata-tcttttgattactacatcggtaaaccgtgcacttg 22048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 288
Target Start/End: Original strand, 22127 - 22360
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||| |||||||| |||| ||||||||||||||| |||||| ||| ||||||||||           |||||||| ||| |||||| |||||||||||    
T  22127 gagaaaattgtctttcgaaaataggtccaacataaagttctaggtttagggtttggtt-----------tgtcaccatgataaaccaacaatcccaagac 22215  T
Q  145 gctttttattattatttttaaaccgttttaaatccc-aacttttcaattaaactctc---ttctaatcattcataaaagttaattgaattaaacaactcc 240  Q
    ||||||||||||| ||||||||||| || ||||||| |||||||||| |||||| ||   ||||||||||||||||| ||||||||||||||||||||||    
T  22216 gctttttattattctttttaaaccg-ttaaaatcccaaacttttcaactaaactttctttttctaatcattcataaaggttaattgaattaaacaactcc 22314  T
Q  241 atgttggaacaatactctcttattactacatcggtaaactgtacactt 288  Q
     ||| ||||  |||  |||||||||||||| |||||||| || |||||    
T  22315 ctgtcggaatgata--ctcttattactacaccggtaaaccgtgcactt 22360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 276
Target Start/End: Complemental strand, 1262 - 1030
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| ||| | ||||||||||||||||| |||||| ||| || | ||||||||||||||||    
T  1262 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttagtggtttggtttatgaaggatttgtcgccatgacggaccaataatcccaaga 1163  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||||||  || |||||| ||| ||||||||| ||| |||||| |||| ||||||||  |  ||||||||||||||| |||||||||     
T  1162 ctctcttttattattatttacaa-ccgtttaaaaccccaactttgcaacttaaaccctct-ctaatcatcaactaaagttaattgaattgaacaactcct 1065  T
Q  242 tgttggaacaatactctcttattactacatcggta 276  Q
    ||| ||||| |||||||||| ||||||| ||||||    
T  1064 tgtcggaacgatactctctttttactacttcggta 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 276
Target Start/End: Complemental strand, 2639 - 2407
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| ||| | ||||||||||||||||| |||||| ||| || | ||||||||||||||||    
T  2639 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttagtggtttggtttatgaaggatttgtcgccatgacggaccaataatcccaaga 2540  T
Q  144 cgct-ttttattattatttttaaaccgttttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaattgaattaaacaactcca 241  Q
    | || ||||||||||||||  || |||||| ||| ||||||||| ||| |||||| |||| ||||||||  |  ||||||||||||||| |||||||||     
T  2539 ctctcttttattattatttacaa-ccgtttaaaaccccaactttgcaacttaaaccctct-ctaatcatcaactaaagttaattgaattgaacaactcct 2442  T
Q  242 tgttggaacaatactctcttattactacatcggta 276  Q
    ||| ||||| |||||||||| ||||||| ||||||    
T  2441 tgtcggaacgatactctctttttactacttcggta 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 4383 - 4246
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||||||| |||||||||||||||||| ||||| |||||  ||| ||||||||||| |||||||||||||| |||||||    
T  4383 gagatgtgataggcttaagagaaacttgtatttagaaagtaggtccaatataaagttctatgtttagggtttggtttgtgaagggtttgtcatcaagatg 4284  T
Q  127 aaccaataatcccaagacgctttttattattattttta 164  Q
    ||||||||||| |||| |||||||||||||| ||||||    
T  4283 aaccaataatctcaaggcgctttttattattcttttta 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 43867 - 43750
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||   |||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  43867 gagaaacttgtctttagaaagtaggtctaacataaagttctagatttaaaggtttggtttgtgaaggatttgtcaccatgatgaaccaataatcccaaga 43768  T
Q  144 c-gctttttattattatt 160  Q
    |  |||||||||||||||    
T  43767 cacctttttattattatt 43750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 4039 - 3833
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatg 126  Q
    |||||| ||||  |||| ||||||||| |||||| ||||| |||| |||||||| |||||| ||| |||||||||||||||||||||||||| | |||||    
T  4039 gagatgtgataggcttaagagaaacttatctttaaaaagtgggtcaaacataaagttctaggtttagggtttggtttatgaagggtttgtcatctagatg 3940  T
Q  127 aaccaataatcccaagacgc-tttttattattatttttaaaccgtt-ttaaatcccaacttttcaa-ttaaactctcttctaatcattcataaaagttaa 223  Q
    |||||||||||||||  ||| |||||||||||| |||| ||| |||   |||||| |||||||||| ||||||||| |||||||||||  | |||| |||    
T  3939 aaccaataatcccaatgcgcttttttattatta-ttttcaactgttaaaaaatccaaacttttcaacttaaactcttttctaatcattgttgaaagataa 3841  T
Q  224 ttgaatta 231  Q
    ||||||||    
T  3840 ttgaatta 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 3998 - 4145
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||| ||| ||| ||||||| ||| |||||||| || |||| | ||| ||||||| ||||||||||||||||||  |    
T  3998 gagaaacttgtctttagaaaataggtctaacgtaagattctaggtttagggtttgggttgtgaaagatttatcaccaaaatgaaccaataatcccaatgc 4097  T
Q  145 gctttttattattatt--tttaaaccgttttaaatcccaacttttcaa 190  Q
    ||||||||||||||||  ||| || || |  |||||||||||||||||    
T  4098 gctttttattattattattttcaatcgataaaaatcccaacttttcaa 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 4163 - 4310
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| |||||| ||| ||| ||||||| ||| |||||||| || |||| | ||| ||||||| ||||||||||||||||||  |    
T  4163 gagaaacttgtctttagaaaataggtctaacgtaagattctaggtttagggtttgggttgtgaaagatttatcaccaaaatgaaccaataatcccaatgc 4262  T
Q  145 gctttttattattatt--tttaaaccgttttaaatcccaacttttcaa 190  Q
    ||||||||||||||||  ||| || || |  |||||||||||||||||    
T  4263 gctttttattattattattttcaatcgataaaaatcccaacttttcaa 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 100733 - 100851
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| |||  |||||||||| |||| |||||||||  |||||||||||||||||||    
T  100733 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttatggtttggttt-tgaatggtttgtcattaagatgaaccaataatccc 100830  T
Q  140 aagacgctttttattattatt 160  Q
    ||| | ||||||||| |||||    
T  100831 aaggctctttttatttttatt 100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 8783 - 8675
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||| ||| || |||| ||| ||||||||||||||  |||||||||||||||||||    
T  8783 cttaagagaaacttgtctttagaaagtaggtccaatataaagtt-taggtttaggatttgtttt-tgaagggtttgtcattaagatgaaccaataatccc 8686  T
Q  140 aagacgctttt 150  Q
    ||| |||||||    
T  8685 aaggcgctttt 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 31647 - 31895
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||| ||||||||||||||  |||||| ||| | ||||| ||| |||||| ||||| | || || |||||||||||||||||||    
T  31647 gagaaacttgtctttagaaaataggtccaacataaggttctaggtttagagtttgatttgtgaaggatttgttatcatgacgaaccaataatcccaagac 31746  T
Q  145 gctttttattattatttttaaaccgttttaaatc----ccaacttttcaa-ttaaactctcttctaatcattcataa-aagttaattgaattaaacaact 238  Q
     ||||| ||| ||||| |||     |||||||      |||||||||||| || |||||||||||||  |||  | | |||||||||||||| |  ||||    
T  31747 actttt-attgttattgttattttcttttaaacaaaatccaacttttcaacttgaactctcttctaacaattgttgacaagttaattgaattcat-aact 31844  T
Q  239 ccatgttggaacaatactctcttattactacatcggtaaactgtacacttg 289  Q
    |  ||||||||| ||| ||| |||||||||||||| ||||| |||||||||    
T  31845 ctctgttggaacgataatcttttattactacatcgataaaccgtacacttg 31895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 14121 - 13946
Alignment:
Q  94 ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct-ttttattattatttttaaaccgttttaaatcccaacttttcaat- 191  Q
    |||||||||| |||| | |||||| ||| |||| ||||||||||||||| | || |||||||||| |||| || |||||  ||| ||||||||| ||||     
T  14121 ggtttggtttgtgaaagatttgtcgccatgatggaccaataatcccaaggctctcttttattattgttttcaa-ccgttaaaaaccccaactttgcaatc 14023  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    | |||| ||| ||||||||  |  ||||||||||| ||||||||||||| ||| ||||| |||||||||| |||||||    
T  14022 tgaactatct-ctaatcatcaagtaaagttaattgcattaaacaactccctgtcggaacgatactctctttttactac 13946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 279
Target Start/End: Original strand, 168727 - 168960
Alignment:
Q  48 aaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgct 147  Q
    |||||||| |||||||| ||| ||||||  || ||| ||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| |  |    
T  168727 aaacttgtgtttagaaaatagatccaacgcaagatt-taggtttagggtttggtttgtgaaggatttgtcaccaagaggaaccaataatcccaaggcatt 168825  T
Q  148 tt--ttattattatttttaaaccgttttaaatcccaactttt---caattaaactctcttctaatcattcataaaagttaattgaattaaacaactccat 242  Q
    ||  ||||||||| ||   |||||||  ||||||||||||||   |  | ||||| || ||||||||||  ||||||| |||  ||||  | |||||| |    
T  168826 tttattattattaattcccaaccgttaaaaatcccaactttttacctttgaaactttcatctaatcattgttaaaagtgaatcaaatt-cataactccct 168924  T
Q  243 gttggaacaatactctcttattactacatcggtaaac 279  Q
    || ||||||||||||| |||||||||||||| |||||    
T  168925 gtcggaacaatactct-ttattactacatcgataaac 168960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 6356 - 6496
Alignment:
Q  122 agatgaaccaataatcccaagacgctttttattat--tat-ttttaaaccgttttaaatc-ccaacttttcaa-ttaaactctcttctaatcattcataa 216  Q
    ||||||||||||||||||||||| || ||| ||||  ||| |||| |||||||| ||| | |||||||||||| || | || ||||||||||||  ||||    
T  6356 agatgaaccaataatcccaagactctctttgttatattatcttttcaaccgtttgaaaactccaacttttcaacttgatct-tcttctaatcatcaataa 6454  T
Q  217 aagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||||||||||||| ||| ||||| |||||||    
T  6455 aagttaattgaattaaacaactccctgtcggaacgatactct 6496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 21995 - 21895
Alignment:
Q  40 cttaggagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatccc 139  Q
    |||| |||||||||||||||||||||| ||||||| ||||| |||| | ||  ||||||| ||| |||||| ||||||| | ||||||||||||||||||    
T  21995 cttaagagaaacttgtctttagaaagtgggtccaatataaagttct-ggttgagggtttgttttgtgaaggatttgtcatctagatgaaccaataatccc 21897  T
Q  140 aa 141  Q
    ||    
T  21896 aa 21895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 70166 - 69968
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    ||||||||| |||||| |||||||||| || | |||||| |||||||| | |||||||||||  ||  ||| |||| ||  ||| ||| |||||| |||     
T  70166 gtttggtttgtgaaggatttgtcaccatgacggaccaatgatcccaaggctctttttattatattaactttcaaccattcgaaaaccccaactttgcaac 70067  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    | || |||||| |||||||  || ||||||||||||||||||||||| | |||  |||| |||||||||| ||||||| ||| || ||| |||||||||    
T  70066 ttaattctcttgtaatcatcaattaaagttaattgaattaaacaacttcctgtcagaacgatactctctttttactacttcgatagaaccgtacacttg 69968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 73 - 153
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||||||||||| ||| |||||| |||||||    
T  73 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacaatactcttttaatactacttcggtaa 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 56131 - 55995
Alignment:
Q  125 tgaaccaataatcccaagacgctttt-tattattat-ttttaaaccgttttaaat-cccaacttttcaattaaactctcttctaatcattcataaaagtt 221  Q
    |||||||||||||||||| | ||||| || |||||| |||| |||||||| |||  ||||||||| ||| |  | ||||||||||||||  | |||||||    
T  56131 tgaaccaataatcccaaggctcttttataatattatcttttcaaccgtttgaaaaacccaactttgcaacttgattctcttctaatcatcaacaaaagtt 56032  T
Q  222 aattgaattaaacaactccatgttggaacaatactct 258  Q
    | || |||| ||||||||||||||||||| |||||||    
T  56031 agttaaatttaacaactccatgttggaacgatactct 55995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 16802 - 16727
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||||||||||||| ||||||||  ||||||| || |||||||| || |||| ||||| ||||||    
T  16802 aaagttaattgaattaaacaactccctgttggaatgatactcttttcattactacttctgtaagactgtgcacttg 16727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 153257 - 153177
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||||||||| |||||||    
T  153257 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacaatactcttttattactacttcggtaa 153177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 149934 - 149873
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    ||||||||||| ||  | |||||||||||||||| ||||||||| ||| ||||| |||||||    
T  149934 tctcttctaatgatcaacaaaagttaattgaatttaacaactccctgtcggaacgatactct 149873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 1648 - 1746
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    ||||||||||||||| |||| |||||| |||||||  |||||| |||   ||||||||||  |||||||||||| ||| |||| |||||||||||||||    
T  1648 gagaaacttgtctttggaaattaggtctaacataaggttctaggtttaatggtttggtttgagaagggtttgtcgccatgatggaccaataatcccaag 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 6262 - 6162
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagac 144  Q
    |||||||||||||||||||||||||| ||| ||||| || ||| ||| |||||| |||| ||||||  ||||||| | || ||||||||||||||||| |    
T  6262 gagaaacttgtctttagaaagtaggttcaatataaagtt-taggtttagggttt-gtttgtgaaggaattgtcactatgacgaaccaataatcccaaggc 6165  T
Q  145 gct 147  Q
    |||    
T  6164 gct 6162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 11427 - 11489
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| || |||||||| |||||||    
T  11427 aaagttaattgaattaaacaactccctgttggaacgatactcttttcattactacttcggtaa 11489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 111060 - 110962
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcg-ggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaag 142  Q
    |||||| ||||||||||||| |||||| |||||||  || ||| |||   |||||||||| ||||||||||||||||| |||| |||||||||| ||||    
T  111060 gagaaatttgtctttagaaattaggtctaacataaggttttaggtttaaaggtttggtttgtgaagggtttgtcaccatgatggaccaataatctcaag 110962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 110923 - 110864
Alignment:
Q  217 aagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||| ||||||| ||||||    
T  110923 aagttaattgaattgaacaactccctattggaacgatactctctttttactacttcggta 110864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 2817 - 2897
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  2817 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttattactacttcggtaa 2897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 34852 - 34932
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||  || ||||| ||||||| ||| |||||| |||||||    
T  34852 tctcttctaatcatctataaaggttaattgaattaaactactcccagtcggaacgatactcttttaatactacttcggtaa 34932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 31255 - 31335
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||||||| ||||||||| ||||| ||||||| ||  |||||| |||||||    
T  31255 tctcttctaatcatttccaaaggttaattgaattaaactactccatgtcggaacgatactcttttcatactacttcggtaa 31335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 25185 - 25265
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  25185 tctcttctaatcatttccaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 25265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 13652 - 13828
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttat-tattatttttaaaccgttttaaatccc-aacttttcaatt 192  Q
    ||||||||| |||||| ||||||||||  | |||||||| |||||||  | |||||| | |||||| |||  ||||||| ||| ||| |||||| ||| |    
T  13652 gtttggtttttgaaggatttgtcaccataacgaaccaatgatcccaatgctctttttttatattatctttcgaccgtttgaaaaccccaactttgcaact 13751  T
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
      | ||||||||||||||  | |||| ||||||||||| ||||||||  ||| ||||| ||||||| | ||||||||    
T  13752 tgattctcttctaatcatcaacaaaatttaattgaatttaacaactctctgtcggaacgatactctttaattactac 13828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 2334 - 2168
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaagacgctttttattat--tatttttaaaccgttttaaatccc-aacttttcaat 191  Q
    |||||||||| |||||  ||||||   |||||||||||||||| |||| | || ||||||||  ||| ||| |||| ||| ||| ||| |||||| ||      
T  2334 gtttggtttacgaaggacttgtcagttagatgaaccaataatcgcaaggctctctttattatattatctttcaaccatttgaaaaccccaactttacatc 2235  T
Q  192 taaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |  | |||||||||||||   | |||||||||||||||||||||||||| ||| ||||| |||||||    
T  2234 ttgattctcttctaatcaccaacaaaagttaattgaattaaacaactccctgtcggaacgatactct 2168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 186918 - 186977
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaaa 278  Q
    |||||||||||||||| ||||| ||| ||||| ||||||| |||||||||| ||||||||    
T  186918 gttaattgaattaaactactccctgtcggaacgatactcttttattactacttcggtaaa 186977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 3532 - 3470
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  3532 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 3470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 18688 - 18630
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||  |||||| |||||||    
T  18688 gttaattgaattaaactactccatgtcggaacgatactctcttcatactacttcggtaa 18630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 319 - 261
Alignment:
Q  219 gttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||| ||||| ||| ||||| ||||||| |||||||||| |||||||    
T  319 gttaattgaattaaactactccctgtcggaacgatactcttttattactacttcggtaa 261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 11927 - 11877
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctcttattac 266  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  11927 aaagttaattgaattaaacaactccctgtcggaacgatactctctttttac 11877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 143 - 223
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||| ||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  143 tctcctctaatcattatcaaaggttaattgaattaaactactccctgtcggaacgatactcttttcatactacttcggtaa 223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 19566 - 19628
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  19566 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 19628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 20080 - 20142
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  20080 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 20142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 26909 - 26971
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  26909 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 26971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 7826 - 7760
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttat 263  Q
    |||||||||||||||  |||| ||||||| |||| ||| ||||| ||| ||||||||||||| ||||    
T  7826 tctcttctaatcatttctaaaggttaattaaattgaactactccctgtcggaacaatactcttttat 7760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 23864 - 23926
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  23864 aaagttaattgaattaaacaactccctgtcggaacgatactcttttaattactacttcggtaa 23926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 78382 - 78492
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagcttt-cgggtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    |||||||||||||||||||| |||||| |||||||  |||||| |||   | |||||||| |||| | |||||| ||| || | |||||||||||||||     
T  78382 gagaaacttgtctttagaaattaggtctaacataaggttctaggtttaacgttttggtttgtgaaagatttgtcgccatgacggaccaataatcccaagg 78481  T
Q  144 cgctttttatt 154  Q
    | |||||||||    
T  78482 ctctttttatt 78492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 24517 - 24589
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    |||||| |||||||  | |||||||||||||||| ||||||||| | | ||||| ||||||| ||||||||||    
T  24517 tctcttataatcatcaacaaaagttaattgaattgaacaactccctatcggaacgatactcttttattactac 24589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 100923 - 100975
Alignment:
Q  27 gagatgcgatatacttaggagaaacttgtctttagaaagtaggtccaacataa 79  Q
    |||||| ||||  |||| ||||||||||||||||||||||||||| |||||||    
T  100923 gagatgtgataggcttaagagaaacttgtctttagaaagtaggtctaacataa 100975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 168731 - 168669
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||    
T  168731 aaagttaattgaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaa 168669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 187863 - 187783
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| |||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  187863 tctcttctaatcatttccaaaggttaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 187783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 905 - 844
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||| ||||||||||   |||||||||||||||||||| ||||| ||| |||||||||||||    
T  905 tctcctctaatcattatcaaaagttaattgaattaaactactccctgtcggaacaatactct 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 21064 - 21003
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactct 258  Q
    |||||||||||||   || ||||||||||||||||||||||||| ||| ||||| |||||||    
T  21064 tctcttctaatcaccgattaaagttaattgaattaaacaactccctgtcggaacgatactct 21003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 8384 - 8287
Alignment:
Q  45 gagaaacttgtctttagaaagtaggtccaacataaaattctagctttcggg-tttggtttatgaagggtttgtcaccaagatgaaccaataatcccaa 141  Q
    |||||||||||||||||||| |||||| || ||||  |||||| |||   | |||||||| ||||||||||||| ||| || | ||||||||||||||    
T  8384 gagaaacttgtctttagaaattaggtctaaaataaggttctaggtttaatgatttggtttgtgaagggtttgtcgccatgacggaccaataatcccaa 8287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 32296 - 32203
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa-actgtacacttg 289  Q
    |||||||||||||||   ||  |||||||||||| ||| ||||| ||| ||||| ||||||||||| |||||| ||||||| ||||| ||||||    
T  32296 tctcttctaatcatttccaatggttaattgaattgaactactccctgtcggaacgatactctcttaatactacttcggtaagactgtgcacttg 32203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 53 - 125
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactac 269  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||| ||||||    
T  53 tctcttctaatcatctctaaaggttaattgaattaaactactccctgtcggaacgatactcttttaatactac 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 11781 - 11701
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||   |||| |||||||||||||||| ||||| ||| ||||| ||||| | ||| |||||| |||||||    
T  11781 tctcttctaatcatctctaaaggttaattgaattaaactactccttgtcggaacgatacttttttaatactacttcggtaa 11701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 49503 - 49590
Alignment:
Q  202 tctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta-aactgtacacttg 289  Q
    ||||||||||  ||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||||||||| ||||| |||||| ||||||    
T  49503 tctaatcatttctaaaagttaattgaattcat-aactccctgtcggaacgatactcttttattactacaccggtagaactgtgcacttg 49590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 79587 - 79651
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctctt 261  Q
    |||||||||||||||   ||| |||||||||||||||| ||||| ||| ||||| ||||||||||    
T  79587 tctcttctaatcattttcaaaggttaattgaattaaactactccctgtcggaacgatactctctt 79651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 12006 - 11924
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||| || ||||||||||  ||||||||||||||||| |  |||||||||| | ||| ||||||| ||||||||||| |||||    
T  12006 aaactttcatctaatcattattaaaagttaattgaattcat-aactccatgtcgaaacgatactcttttattactacaccggta 11924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 24646 - 24564
Alignment:
Q  193 aaactctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    ||||| || ||||||||||  ||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||||||||| |||||    
T  24646 aaactttcatctaatcattattaaaagttaattgaattcat-aactccctgtcggaacgatactcttttattactacaccggta 24564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 7244 - 7163
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  7244 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 34868 - 34793
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||||| ||||||| ||| ||||| ||||||| || |||||||| ||||||| ||||| ||||||    
T  34868 aaagttaattgaattaagcaactccctgtcggaacgatactcttttcattactacttcggtaagactgtgcacttg 34793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 83635 - 83560
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa-actgtacacttg 289  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||| || |||||||| ||||||| ||||| ||||||    
T  83635 aaagttaattaaattaaacaactccctgtcggaacgatactcttttcattactacttcggtaagactgtgcacttg 83560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 16 - 97
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  16 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 5676 - 5614
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| ||  ||||| ||||||| || |||||||| |||||||    
T  5676 aaagttaattgaattaaacaactccctgacggaactatactcttttcattactacttcggtaa 5614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 40644 - 40725
Alignment:
Q  196 ctctcttctaatcat-tcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  40644 ctctcttctaatcatctctaaaaagttaattgaattgaactactccctgtcggaacgatactctttta-tactacttcggtaa 40725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 74669 - 74731
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||| |||  |||| ||||||| || |||||||| |||||||    
T  74669 aaagttaattgaattaaacaactccctgtcagaacgatactcttttcattactacttcggtaa 74731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 3021 - 3083
Alignment:
Q  216 aaagttaattgaattaaacaactccatgttggaacaatactctctt-attactacatcggtaa 277  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||| || |||||||| |||||||    
T  3021 aaagttaattgaattaaacaactcgctgtcggaacgatactcttttcattactacttcggtaa 3083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 2085 - 2138
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaac 250  Q
    ||||||||||||||  |  ||||||||||||||||||||||||| ||| |||||    
T  2085 tctcttctaatcatcaactaaagttaattgaattaaacaactccctgtcggaac 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 5 - 85
Alignment:
Q  196 ctctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   |||| ||||||| |||| ||| ||||||||| ||||| ||||||| ||| |||||| |||||||    
T  5 ctctcttctaatcatctctaaaggttaattaaattgaactactccatgtcggaacgatactctttta-tactacttcggtaa 85  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 14137 - 14209
Alignment:
Q  203 ctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggta 276  Q
    |||||||||  |||||| |||||||||| |  |||||| ||| ||||| ||||||| |||||||||||||||||    
T  14137 ctaatcattgttaaaagataattgaattcat-aactccctgtcggaacgatactcttttattactacatcggta 14209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 3900 - 3993
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa-actgtacacttg 289  Q
    ||||||||||||||   |||| ||||||| |||| ||| ||||| ||| ||||| ||||||| ||| |||||| ||||||| || |||||||||    
T  3900 tctcttctaatcatctctaaaggttaattaaattgaactactccctgtcggaacgatactcttttaatactacttcggtaagaccgtacacttg 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 4116 - 4164
Alignment:
Q  95 gtttggtttatgaagggtttgtcaccaagatgaaccaataatcccaaga 143  Q
    ||||||||| |||||| |||||||||| || |||||||||||| |||||    
T  4116 gtttggtttgtgaaggatttgtcaccatgacgaaccaataatctcaaga 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 350 - 430
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| ||||| |||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  350 tctcttctaatcatttccaaaggttaaatgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 22159 - 22079
Alignment:
Q  197 tctcttctaatcattcataaaagttaattgaattaaacaactccatgttggaacaatactctcttattactacatcggtaa 277  Q
    |||||||||||||||   ||| | |||||||||| ||| ||||| ||| ||||| ||||||| ||| |||||| |||||||    
T  22159 tctcttctaatcatttccaaagggtaattgaattgaactactccctgtcggaacgatactcttttaatactacttcggtaa 22079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University