View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3778_low_9 (Length: 237)
Name: NF3778_low_9
Description: NF3778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3778_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 39928527 - 39928743
Alignment:
| Q |
21 |
atgacaacaaccttccatagaagaagcattattattcacggacagtttgaatgaaactaagattcgaatcataaaataagtacctcttcatatgggaaac |
120 |
Q |
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| T |
39928527 |
atgacaacaaccttgcatagaagaagcattattattcacggacagtttgaatgaaactaagattcaaatcataaaataagtacctcttcatatgggaaac |
39928626 |
T |
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| Q |
121 |
caatgacccatatgttcatccaccaagaaaaactttcgcttggaatgattcttgataatataaaatggaaagattaaaataaaagtatgtatatgttgct |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
39928627 |
caatgacccatatgttcatccaccaagaaaaactttcgcttggaatgattcttgagaatataaaatggaaagatttaaataaaagtatgtatatgttgct |
39928726 |
T |
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| Q |
221 |
gagagtggcgtgacgtg |
237 |
Q |
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||||||||||||||||| |
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| T |
39928727 |
gagagtggcgtgacgtg |
39928743 |
T |
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