View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3780_high_9 (Length: 234)
Name: NF3780_high_9
Description: NF3780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3780_high_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 15263065 - 15263298
Alignment:
| Q |
1 |
tcatcagttttttccaagggatcaacatcaacaacataatttggtaagaaattttgatggtggaattgggagcaactacgatgctagtctcttggctatg |
100 |
Q |
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| T |
15263065 |
tcatcagttttttccaagggatcaacatcaacaacataatttggttagaaattttgatggtggaattgggagcaactatgatgctagtctcttggctatg |
15263164 |
T |
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| Q |
101 |
aatatatctgctagcttaggacagatcaatcaacttcaacatcatagtgctgctggtggtggtggtgacgaccgccgtactgttaaccgctcctagctag |
200 |
Q |
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| T |
15263165 |
aatatatctgctagcttaggacagatcaatcaacttcaacatcatagtgctgctggtggtggtggtgacgaccgccgtactgttaaccgctcctagctag |
15263264 |
T |
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| Q |
201 |
ggtttctaatgctataggtaataattaatgcttt |
234 |
Q |
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| T |
15263265 |
ggtttctaatgctataggtaataattaatgcttt |
15263298 |
T |
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