View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3781_high_7 (Length: 467)

Name: NF3781_high_7
Description: NF3781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3781_high_7
NF3781_high_7
[»] chr4 (42 HSPs)
chr4 (11-116)||(29863826-29863931)
chr4 (171-276)||(29863666-29863771)
chr4 (356-449)||(29863493-29863585)
chr4 (205-261)||(4878097-4878153)
chr4 (212-266)||(45678388-45678442)
chr4 (201-266)||(46799880-46799945)
chr4 (199-261)||(4577694-4577755)
chr4 (205-279)||(24310406-24310480)
chr4 (212-266)||(33777019-33777073)
chr4 (208-261)||(21766677-21766730)
chr4 (205-261)||(9096066-9096122)
chr4 (217-261)||(50291412-50291456)
chr4 (206-261)||(1868779-1868834)
chr4 (214-257)||(18944419-18944462)
chr4 (208-266)||(43983022-43983080)
chr4 (212-261)||(22893998-22894047)
chr4 (212-261)||(22945666-22945715)
chr4 (205-261)||(8487765-8487821)
chr4 (209-261)||(19807307-19807359)
chr4 (205-261)||(36110264-36110320)
chr4 (214-261)||(8614312-8614359)
chr4 (214-261)||(32294646-32294693)
chr4 (212-261)||(31413678-31413727)
chr4 (207-260)||(53781724-53781777)
chr4 (212-256)||(36488362-36488406)
chr4 (217-260)||(37775324-37775367)
chr4 (214-261)||(38960554-38960601)
chr4 (214-257)||(39699361-39699404)
chr4 (212-246)||(4949267-4949301)
chr4 (216-266)||(29577332-29577382)
chr4 (212-254)||(43871101-43871143)
chr4 (214-256)||(46791885-46791927)
chr4 (212-242)||(48650160-48650190)
chr4 (214-267)||(26442282-26442335)
chr4 (206-247)||(26442422-26442463)
chr4 (205-246)||(33278672-33278713)
chr4 (205-254)||(42815401-42815450)
chr4 (212-253)||(48760423-48760464)
chr4 (206-242)||(14089932-14089968)
chr4 (360-392)||(31318751-31318783)
chr4 (360-396)||(43864028-43864064)
chr4 (207-247)||(43864033-43864073)
[»] chr6 (15 HSPs)
chr6 (205-266)||(608546-608607)
chr6 (206-279)||(22422262-22422335)
chr6 (214-261)||(34792136-34792183)
chr6 (207-261)||(6997437-6997491)
chr6 (207-261)||(9395224-9395278)
chr6 (205-257)||(17442956-17443008)
chr6 (205-261)||(19713124-19713180)
chr6 (207-261)||(10557539-10557593)
chr6 (212-245)||(12151761-12151794)
chr6 (212-261)||(32135329-32135378)
chr6 (214-256)||(7303999-7304041)
chr6 (205-233)||(21443845-21443873)
chr6 (205-233)||(30744352-30744380)
chr6 (205-253)||(32253919-32253966)
chr6 (357-389)||(32905879-32905911)
[»] chr5 (31 HSPs)
chr5 (205-261)||(17574109-17574165)
chr5 (214-261)||(37821035-37821082)
chr5 (212-266)||(12612909-12612963)
chr5 (214-276)||(35616695-35616757)
chr5 (216-261)||(18729173-18729218)
chr5 (205-261)||(21771358-21771414)
chr5 (205-261)||(33893716-33893772)
chr5 (209-260)||(36899370-36899421)
chr5 (215-266)||(38919971-38920022)
chr5 (212-266)||(43152952-43153006)
chr5 (214-261)||(39032498-39032545)
chr5 (212-266)||(22864271-22864325)
chr5 (207-261)||(25585343-25585397)
chr5 (207-261)||(42364559-42364613)
chr5 (212-261)||(6458897-6458946)
chr5 (216-261)||(12203275-12203320)
chr5 (209-241)||(2736035-2736067)
chr5 (214-258)||(14126547-14126591)
chr5 (201-253)||(43214085-43214137)
chr5 (207-266)||(9940179-9940238)
chr5 (212-266)||(8442284-8442338)
chr5 (208-250)||(35578991-35579033)
chr5 (212-253)||(14522856-14522897)
chr5 (206-247)||(24330014-24330055)
chr5 (208-245)||(26627476-26627512)
chr5 (206-247)||(27440615-27440656)
chr5 (212-261)||(35595878-35595927)
chr5 (205-266)||(35924395-35924456)
chr5 (364-393)||(40201154-40201183)
chr5 (205-261)||(3849628-3849684)
chr5 (205-245)||(38919860-38919900)
[»] chr3 (38 HSPs)
chr3 (204-276)||(9027728-9027800)
chr3 (212-276)||(43149235-43149299)
chr3 (206-261)||(27276864-27276919)
chr3 (214-261)||(29555735-29555782)
chr3 (206-261)||(29846777-29846832)
chr3 (206-261)||(48117466-48117521)
chr3 (212-266)||(33972008-33972062)
chr3 (205-261)||(40821745-40821801)
chr3 (214-261)||(14838939-14838986)
chr3 (207-261)||(29057778-29057832)
chr3 (207-261)||(44827083-44827137)
chr3 (216-266)||(51385336-51385386)
chr3 (212-253)||(11404846-11404887)
chr3 (205-261)||(35368741-35368797)
chr3 (205-261)||(44689933-44689989)
chr3 (207-266)||(31763932-31763991)
chr3 (220-261)||(9158936-9158977)
chr3 (214-266)||(16295589-16295641)
chr3 (209-261)||(32152023-32152075)
chr3 (212-252)||(45966752-45966792)
chr3 (217-260)||(2935408-2935451)
chr3 (212-247)||(25595944-25595979)
chr3 (217-260)||(48205176-48205219)
chr3 (357-395)||(7351676-7351714)
chr3 (206-276)||(38296548-38296618)
chr3 (357-395)||(47141638-47141676)
chr3 (357-395)||(49886689-49886727)
chr3 (357-391)||(50025736-50025770)
chr3 (357-390)||(25559704-25559737)
chr3 (216-253)||(25596074-25596111)
chr3 (212-257)||(39629861-39629906)
chr3 (205-266)||(43220027-43220088)
chr3 (205-254)||(46019459-46019508)
chr3 (212-261)||(50745679-50745728)
chr3 (205-253)||(30664639-30664687)
chr3 (363-391)||(33256308-33256336)
chr3 (206-254)||(49983376-49983424)
chr3 (356-388)||(52381184-52381216)
[»] chr1 (34 HSPs)
chr1 (206-266)||(8577388-8577448)
chr1 (204-266)||(31244619-31244681)
chr1 (212-266)||(37947112-37947166)
chr1 (212-276)||(48336347-48336411)
chr1 (208-261)||(11121610-11121663)
chr1 (205-261)||(41564765-41564821)
chr1 (214-261)||(12990379-12990426)
chr1 (214-261)||(48962116-48962163)
chr1 (207-257)||(29094635-29094685)
chr1 (207-261)||(40239998-40240052)
chr1 (217-260)||(836002-836045)
chr1 (214-261)||(21263153-21263200)
chr1 (214-261)||(23399883-23399930)
chr1 (206-261)||(40118601-40118656)
chr1 (211-254)||(43105242-43105285)
chr1 (357-391)||(11038261-11038295)
chr1 (206-276)||(11897289-11897359)
chr1 (205-242)||(35030659-35030696)
chr1 (217-260)||(1100348-1100391)
chr1 (360-391)||(19427520-19427551)
chr1 (214-253)||(29638853-29638892)
chr1 (223-261)||(30414994-30415032)
chr1 (207-257)||(50875566-50875616)
chr1 (206-247)||(21854496-21854537)
chr1 (363-392)||(30530618-30530647)
chr1 (209-254)||(30596851-30596896)
chr1 (212-245)||(41425246-41425279)
chr1 (205-266)||(46903595-46903656)
chr1 (217-258)||(50796134-50796175)
chr1 (356-392)||(8577539-8577575)
chr1 (208-256)||(32966402-32966450)
chr1 (205-257)||(36930642-36930693)
chr1 (214-266)||(40053031-40053083)
chr1 (213-257)||(48634367-48634411)
[»] chr8 (36 HSPs)
chr8 (207-261)||(18550109-18550163)
chr8 (206-261)||(22203101-22203156)
chr8 (212-266)||(42651045-42651099)
chr8 (212-260)||(1422594-1422642)
chr8 (205-261)||(21649055-21649111)
chr8 (205-261)||(41776305-41776361)
chr8 (214-261)||(25430776-25430823)
chr8 (203-261)||(28713223-28713281)
chr8 (203-261)||(28720570-28720628)
chr8 (203-261)||(28728212-28728270)
chr8 (207-261)||(34838157-34838211)
chr8 (206-261)||(37471773-37471828)
chr8 (212-277)||(34883278-34883343)
chr8 (205-261)||(22836024-22836080)
chr8 (204-260)||(23709107-23709163)
chr8 (212-276)||(34578229-34578293)
chr8 (214-257)||(4148549-4148592)
chr8 (207-266)||(8233383-8233442)
chr8 (214-261)||(27300476-27300523)
chr8 (216-261)||(13924139-13924184)
chr8 (207-276)||(44001171-44001240)
chr8 (356-392)||(37784411-37784447)
chr8 (205-257)||(42443240-42443291)
chr8 (363-399)||(45405852-45405888)
chr8 (360-395)||(5742698-5742733)
chr8 (207-242)||(30462637-30462672)
chr8 (356-391)||(32674269-32674304)
chr8 (207-261)||(33692851-33692905)
chr8 (212-266)||(34247899-34247953)
chr8 (207-240)||(3000728-3000761)
chr8 (356-393)||(23708973-23709010)
chr8 (219-260)||(35701742-35701783)
chr8 (207-247)||(5742689-5742729)
chr8 (217-257)||(18411194-18411234)
chr8 (206-254)||(33511738-33511786)
chr8 (201-245)||(38939212-38939256)
[»] chr2 (46 HSPs)
chr2 (207-276)||(8757659-8757728)
chr2 (207-261)||(28679257-28679311)
chr2 (207-276)||(35518390-35518459)
chr2 (214-266)||(23141479-23141531)
chr2 (214-266)||(23553269-23553321)
chr2 (214-266)||(30340119-30340171)
chr2 (206-261)||(45202018-45202073)
chr2 (205-261)||(35007986-35008042)
chr2 (214-261)||(5852588-5852635)
chr2 (206-261)||(11828706-11828761)
chr2 (214-261)||(12257031-12257078)
chr2 (214-261)||(26387725-26387772)
chr2 (206-261)||(35705803-35705858)
chr2 (207-261)||(16463422-16463476)
chr2 (205-261)||(35203634-35203690)
chr2 (213-257)||(43515025-43515069)
chr2 (217-261)||(44897756-44897800)
chr2 (206-261)||(11152585-11152640)
chr2 (206-261)||(27529657-27529712)
chr2 (214-261)||(34141573-34141620)
chr2 (214-261)||(37064188-37064235)
chr2 (206-261)||(40115645-40115700)
chr2 (206-260)||(33569699-33569753)
chr2 (207-261)||(38778021-38778075)
chr2 (216-261)||(27538828-27538873)
chr2 (212-261)||(43205223-43205272)
chr2 (356-392)||(3839408-3839444)
chr2 (214-266)||(38533092-38533144)
chr2 (218-261)||(17999874-17999917)
chr2 (205-276)||(24491562-24491633)
chr2 (206-257)||(28508477-28508528)
chr2 (223-266)||(43559988-43560031)
chr2 (212-254)||(7574439-7574481)
chr2 (204-254)||(13711198-13711247)
chr2 (207-261)||(22296016-22296070)
chr2 (214-272)||(27329003-27329061)
chr2 (217-258)||(3681496-3681537)
chr2 (357-390)||(6328667-6328700)
chr2 (212-253)||(19523293-19523334)
chr2 (212-261)||(35798339-35798388)
chr2 (212-253)||(41156895-41156936)
chr2 (214-266)||(1151654-1151706)
chr2 (364-392)||(9834115-9834143)
chr2 (214-262)||(18749257-18749305)
chr2 (357-389)||(34373006-34373038)
chr2 (212-260)||(37076784-37076832)
[»] chr7 (38 HSPs)
chr7 (214-276)||(23034207-23034269)
chr7 (205-261)||(47945113-47945169)
chr7 (205-261)||(47950543-47950599)
chr7 (214-261)||(24380615-24380662)
chr7 (214-261)||(48639279-48639326)
chr7 (356-394)||(33881742-33881780)
chr7 (212-261)||(38197791-38197840)
chr7 (212-260)||(11788380-11788428)
chr7 (214-266)||(45335988-45336040)
chr7 (214-261)||(27704565-27704612)
chr7 (214-261)||(29923801-29923847)
chr7 (214-261)||(41538610-41538657)
chr7 (214-261)||(41910079-41910126)
chr7 (206-247)||(28548253-28548294)
chr7 (205-261)||(39415548-39415604)
chr7 (214-261)||(1709414-1709461)
chr7 (217-260)||(25272722-25272765)
chr7 (207-254)||(41018662-41018709)
chr7 (364-403)||(47530336-47530375)
chr7 (205-255)||(10591033-10591083)
chr7 (206-260)||(22331097-22331151)
chr7 (205-247)||(27704432-27704474)
chr7 (207-261)||(37848507-37848561)
chr7 (208-266)||(41458788-41458846)
chr7 (214-256)||(44185311-44185353)
chr7 (207-260)||(7295598-7295651)
chr7 (243-276)||(11789611-11789644)
chr7 (205-254)||(44184584-44184633)
chr7 (356-392)||(11070226-11070262)
chr7 (363-395)||(19426575-19426607)
chr7 (205-233)||(25940553-25940581)
chr7 (206-246)||(32428213-32428252)
chr7 (206-242)||(35072132-35072167)
chr7 (214-266)||(37970058-37970110)
chr7 (213-253)||(40207724-40207764)
chr7 (364-392)||(46260137-46260165)
chr7 (214-266)||(47379685-47379737)
chr7 (363-391)||(49128722-49128750)
[»] scaffold0014 (1 HSPs)
scaffold0014 (214-261)||(145177-145224)
[»] scaffold0514 (1 HSPs)
scaffold0514 (214-260)||(1741-1787)
[»] scaffold0024 (1 HSPs)
scaffold0024 (205-261)||(48784-48840)
[»] scaffold0058 (1 HSPs)
scaffold0058 (212-254)||(3080-3122)
[»] scaffold0299 (1 HSPs)
scaffold0299 (213-246)||(18831-18864)
[»] scaffold0150 (1 HSPs)
scaffold0150 (213-246)||(30541-30574)
[»] scaffold0651 (1 HSPs)
scaffold0651 (360-392)||(4887-4919)
[»] scaffold0115 (1 HSPs)
scaffold0115 (214-254)||(15084-15123)
[»] scaffold0032 (1 HSPs)
scaffold0032 (365-393)||(35999-36027)


Alignment Details
Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 29863931 - 29863826
Alignment:
Q  11 cagagaagagatagtgttagagagatttataaaattaccatttaatttttgtgtcgaaatttcaattgcataattgtcgttcaagggattcaatgttatg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29863931 cagagaagagatagtgttagagagatttataaaattaccatttattttttgtgtcgaaatttcaattacataattgtcgttcaagggattcgatgttatg 29863832  T
Q  111 ctgtcc 116  Q
    ||||||    
T  29863831 ctgtcc 29863826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 29863771 - 29863666
Alignment:
Q  171 cacaattctgggtacccttattttaaattatttgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctccttt 270  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||    
T  29863771 cacaattttgggtaccctcattttaaattatttgaaagagcaatgatatttgaacaattattttggtacaacttttgagacaacattgttgctctccctt 29863672  T
Q  271 cttatt 276  Q
    ||||||    
T  29863671 cttatt 29863666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 29863585 - 29863493
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctctatttgaattgacctcagtccaaatttcagataatgtgggaaatgtttagcgtacatag 449  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  29863585 gttataccaaaatggttgtacaaatatcatttctctatttgaattgaactc-gtccaaatttcggataatgtgggaaatgtttagcgtacatag 29863493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 4878153 - 4878097
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4878153 aaagagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 4878097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 45678442 - 45678388
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  45678442 aatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctc 45678388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 46799945 - 46799880
Alignment:
Q  201 tttgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  46799945 tttgtaagagcaatgatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctc 46799880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 4577755 - 4577694
Alignment:
Q  199 tatttgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4577755 tattttaaagagtaatgatatttgaacaact-ttttgctacaacttttgggacaaccttgttg 4577694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 24310406 - 24310480
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttattagt 279  Q
    |||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||  ||| ||| ||||||||    
T  24310406 aaagagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctttttttattagt 24310480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 33777073 - 33777019
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  33777073 aatgatatttgaacaactattttggtacaatttttgggataaccttgttgttctc 33777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 21766730 - 21766677
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  21766730 gagcagtgatatttgaacaactcttttggtataacttttgggacaaccttgttg 21766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 9096122 - 9096066
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  9096122 aaagagtaatgatatttgaacaattattttgatacaacttttggtacaaccttgttg 9096066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 50291456 - 50291412
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50291456 tatttgaacaactcttttggtacaacttttgggacaaccttgttg 50291412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 1868779 - 1868834
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  1868779 aagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttg 1868834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 18944462 - 18944419
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  18944462 tgatatttgaacaactcttttggtacaacttttgggacaacctt 18944419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 43983080 - 43983022
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || |||| ||||    
T  43983080 gagcaatgatatttgaacaaccattttggtacaacttttaggacaatctagttgttctc 43983022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 22894047 - 22893998
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  22894047 aatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 22893998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 22945715 - 22945666
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  22945715 aatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 22945666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 8487821 - 8487765
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  8487821 aaagagtaatgatatttgaacaatttttttgctacaacttttgagacaaccttgttg 8487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 19807307 - 19807359
Alignment:
Q  209 agcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||| |||| |||||| |||||||||||||||||||    
T  19807307 agcagtgatatttgaacaactttttttgtacaatttttgggacaaccttgttg 19807359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 36110320 - 36110264
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  36110320 aaagagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttg 36110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 8614359 - 8614312
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||    
T  8614359 tgatatttgaacaactttttttgtacaatttttgggacaaccttgttg 8614312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 32294646 - 32294693
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||    
T  32294646 tgatatttgaacaactcttttggtataatttttgggacaaccttgttg 32294693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 31413678 - 31413727
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  31413678 aatgatatttgaacaacttttttgctacaagttttgtgacaaccttgttg 31413727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 53781724 - 53781777
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||| |||||||||| ||||||| || || ||||||||||||||||||||||||    
T  53781724 agagtaatgatatttcaacaacttttgtgctacaacttttgggacaaccttgtt 53781777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 36488362 - 36488406
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaacct 256  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||    
T  36488362 aatgatatttgaacaattatttttgtacaatttttgggacaacct 36488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 37775324 - 37775367
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||    
T  37775324 tatttgaacaactcttttcgtacaacttttgagacaaccttgtt 37775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 38960554 - 38960601
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||| ||||| ||||||||||| |||||||    
T  38960554 tgatatttgaacaactcttttgatacaatttttgggacaatcttgttg 38960601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 39699361 - 39699404
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  39699361 tgatatttgaacaactcttttgatacaacttttggaacaacctt 39699404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 4949301 - 4949267
Alignment:
Q  212 aatgatatttgaacaactattttggtacaactttt 246  Q
    ||||||||||| |||||||||||||||||||||||    
T  4949301 aatgatatttgtacaactattttggtacaactttt 4949267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 29577332 - 29577382
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||| ||| ||| |||||| ||||||||||||||||||| ||||    
T  29577332 atatttgaacatctacttttgtacaatttttgggacaaccttgttgttctc 29577382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 43871143 - 43871101
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  43871143 aatgatatttgtacaactgttttggaacaacttttgggacaac 43871101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 46791885 - 46791927
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacct 256  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  46791885 tgatatttgaacaactcttttgatacaacttttgagacaacct 46791927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 48650160 - 48650190
Alignment:
Q  212 aatgatatttgaacaactattttggtacaac 242  Q
    |||||||||||||||||||||||||||||||    
T  48650160 aatgatatttgaacaactattttggtacaac 48650190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 26442282 - 26442335
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcc 267  Q
    |||||||| |||||| ||||||||||||| |||| |||||| |||||| |||||    
T  26442282 tgatattttaacaacaattttggtacaacctttgagacaactttgttgttctcc 26442335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 26442463 - 26442422
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||    
T  26442463 aagagaaatgatatttgtacaaccattttggtacaacttttg 26442422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 33278672 - 33278713
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaactttt 246  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  33278672 aaagagaaatgatatttgaacaactattttgtgacaactttt 33278713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 42815401 - 42815450
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||||| ||||||||||| ||||||||||||  |||||||||| ||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgtgacaac 42815450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 48760464 - 48760423
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  48760464 aatgatatttgaacaacttttttgctacaacttttggaacaa 48760423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 14089932 - 14089968
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaac 242  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  14089932 aagagtaatgatatttgaacaactattttgggacaac 14089968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 31318783 - 31318751
Alignment:
Q  360 taccaaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||| ||||||||||||||||    
T  31318783 taccaaaatggttgtacaaatatcatttctcta 31318751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 43864064 - 43864028
Alignment:
Q  360 taccaaaatggttgtataaatatcatttctctatttg 396  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  43864064 taccaaaatagttgtacaaatatcatttctctatttg 43864028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 43864033 - 43864073
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  43864033 agagaaatgatatttgtacaactattttggtacaatttttg 43864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 608546 - 608607
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  608546 aaagagcaatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctc 608607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 22422335 - 22422262
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttattagt 279  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  22422335 aagagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcattagt 22422262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 34792183 - 34792136
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34792183 tgatatttgaacaactcttttggtataacttttgggacaaccttgttg 34792136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 6997437 - 6997491
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  6997437 agagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttg 6997491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 9395224 - 9395278
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  9395224 agagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 9395278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 17443008 - 17442956
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  17443008 aaagagtagtgatttttgaacaactcttttggtacaacttttgggacaacctt 17442956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 19713180 - 19713124
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||    
T  19713180 aaagagtaatgatatttgaacaacttttttacaacaacttttgggacaaccttgttg 19713124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 10557593 - 10557539
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| ||||| |||||||||||| |||| |||||||    
T  10557593 agagtaatgatatttgaacaacttttttgctacaacttttggaacaatcttgttg 10557539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 12151761 - 12151794
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttt 245  Q
    ||||||||||||||||||||||||||||||||||    
T  12151761 aatgatatttgaacaactattttggtacaacttt 12151794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 32135329 - 32135378
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| |||||||||| |||||| |||||||    
T  32135329 aatgatatttgaacaacttttttgctacaacttttaggacaatcttgttg 32135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 7303999 - 7304041
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacct 256  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  7303999 tgatatttgaacaactcttttgatacaacttttgagacaacct 7304041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 233
Target Start/End: Complemental strand, 21443873 - 21443845
Alignment:
Q  205 aaagagcaatgatatttgaacaactattt 233  Q
    |||||||||||||||||||||||||||||    
T  21443873 aaagagcaatgatatttgaacaactattt 21443845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 233
Target Start/End: Complemental strand, 30744380 - 30744352
Alignment:
Q  205 aaagagcaatgatatttgaacaactattt 233  Q
    |||||||||||||||||||||||||||||    
T  30744380 aaagagcaatgatatttgaacaactattt 30744352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 32253966 - 32253919
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||| | ||||||||||||||||| |||||||||||||||| |||||    
T  32253966 aaagagtagtgatatttgaacaacta-tttggtacaacttttgtgacaa 32253919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Original strand, 32905879 - 32905911
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttct 389  Q
    |||| ||||||||||||||||||||||||||||    
T  32905879 ttatcccaaaatggttgtataaatatcatttct 32905911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 17574109 - 17574165
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17574109 aaagagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 17574165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 37821035 - 37821082
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37821035 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 37821082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 12612909 - 12612963
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  12612909 aatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctc 12612963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 35616695 - 35616757
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| ||||  ||||||||    
T  35616695 tgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttatt 35616757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 18729173 - 18729218
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  18729173 atatttgaacaactcttttggtacaacttttgggacaaccttgttg 18729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 21771358 - 21771414
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  21771358 aaagagtagtgatatttgaacaactcttttggtataacttttgggacaaccttgttg 21771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 33893772 - 33893716
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||    
T  33893772 aaagagcaatgatatttgaacaatttttttactacaacttttgggacaaccttgttg 33893716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 36899370 - 36899421
Alignment:
Q  209 agcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  36899370 agcagtgatatttgaacaactattttggtacaacttttggaacaatcttgtt 36899421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 38920022 - 38919971
Alignment:
Q  215 gatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  38920022 gatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctc 38919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 43152952 - 43153006
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||||| ||||    
T  43152952 aatgatatttgaacaactattttggtacaactcttaggacaactttgttgttctc 43153006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 39032498 - 39032545
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  39032498 tgatatttgaacaactcttttgatacaatttttgggacaaccttgttg 39032545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 22864271 - 22864325
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||| || || |||||||||||| |||||| ||||    
T  22864271 aatgatatttgaacaactattttgttataatttttgggacaacgttgttgttctc 22864325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 25585343 - 25585397
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||| |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  25585343 agagtaataatatttgaacaactattttgttacaacttttgggagaactttgttg 25585397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 42364613 - 42364559
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| ||||   ||||||||||||||||||||||||    
T  42364613 agagtaatgatatttgaacaacttttttccaacaacttttgggacaaccttgttg 42364559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 6458946 - 6458897
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| || || |||||||||||||||||||    
T  6458946 aatgatatttgaacaacttttttgctataatttttgggacaaccttgttg 6458897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 12203320 - 12203275
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||    
T  12203320 atatttgaacaactcttttggtacaacttttgtgacaatcttgttg 12203275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 2736067 - 2736035
Alignment:
Q  209 agcaatgatatttgaacaactattttggtacaa 241  Q
    |||||||||||||||||||||||||||||||||    
T  2736067 agcaatgatatttgaacaactattttggtacaa 2736035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 14126591 - 14126547
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttg 258  Q
    |||||||||||||||| |||||||| | |||||||||||||||||    
T  14126591 tgatatttgaacaactcttttggtagagcttttgggacaaccttg 14126547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 43214137 - 43214085
Alignment:
Q  201 tttgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||| ||||||||||||||| ||||||||  |||||||||| |||||    
T  43214137 tttgaaagagaaatgatatttgaacatctattttgcaacaacttttgtgacaa 43214085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 9940238 - 9940179
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||| ||||||||||||| |||||||||| ||||| |||| ||||||| |||||| ||||    
T  9940238 agagtaatgatatttgaataactattttgatacaatttttaggacaactttgttgttctc 9940179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 8442338 - 8442284
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||||||||| || |||||| ||||  |||||| ||||    
T  8442338 aatgatatttgaacaactattttggtataatttttggaacaattttgttgttctc 8442284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 35579033 - 35578991
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttggga 250  Q
    |||||||||||||||||||| |||||||||| || ||||||||    
T  35579033 gagcaatgatatttgaacaattattttggtataatttttggga 35578991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 14522856 - 14522897
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  14522856 aatgttatttgaacaacttttttgctacaacttttgggacaa 14522897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 24330055 - 24330014
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  24330055 aagagaaatgatatttgtacaattattttggtacaacttttg 24330014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 26627512 - 26627476
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttt 245  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26627512 gagcaatgatatttgaacaacta-tttggtacaacttt 26627476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 27440656 - 27440615
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    |||| |||||||||||||||||||||||||  ||||||||||    
T  27440656 aagatcaatgatatttgaacaactattttgtaacaacttttg 27440615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 35595878 - 35595927
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||  ||||| ||||||||||| |||||||    
T  35595878 aatgatatttgaacaacttttttattacaatttttgggacaatcttgttg 35595927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 35924456 - 35924395
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||| ||||||||||| |||||| |||||  |||| ||||| ||||||||||||| ||||    
T  35924456 aaagagtaatgatatttgtacaactcttttgaaacaatttttgagacaaccttgttgttctc 35924395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 40201154 - 40201183
Alignment:
Q  364 aaaatggttgtataaatatcatttctctat 393  Q
    ||||||||||||||||||||||||||||||    
T  40201154 aaaatggttgtataaatatcatttctctat 40201183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 3849684 - 3849628
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||| |||||| || ||||| ||||||||||| |||||||||||||    
T  3849684 aaagagtagtgatatatgaacatcttttttgctacaacttttgagacaaccttgttg 3849628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 38919860 - 38919900
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttt 245  Q
    |||||| ||||||||||| ||||||||||| ||||||||||    
T  38919860 aaagagaaatgatatttgtacaactatttttgtacaacttt 38919900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 9027800 - 9027728
Alignment:
Q  204 gaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||    
T  9027800 gaaagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttatt 9027728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 43149235 - 43149299
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||    
T  43149235 aatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttatt 43149299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 27276919 - 27276864
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27276919 aagagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttg 27276864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 29555735 - 29555782
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  29555735 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttg 29555782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 29846777 - 29846832
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  29846777 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 29846832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 48117521 - 48117466
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  48117521 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 48117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 33972062 - 33972008
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  33972062 aatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctc 33972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 40821745 - 40821801
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  40821745 aaagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttg 40821801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 14838939 - 14838986
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14838939 tgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 14838986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 29057832 - 29057778
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  29057832 agagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttg 29057778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 44827137 - 44827083
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  44827137 agagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttg 44827083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 51385336 - 51385386
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  51385336 atatttgaacaactattttagtacaacttttgggacaaccatgttgttctc 51385386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 11404846 - 11404887
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  11404846 aatgatatttgaacaactattttggtacaatttttgggacaa 11404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 35368797 - 35368741
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| ||||||||||||||||||  |||| ||||||||||||||||| |||||||    
T  35368797 aaagagtaatgatatttgaacaacttgtttgctacaacttttgggacaatcttgttg 35368741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 44689989 - 44689933
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||| | |||||| ||||||||||||||||||||||||    
T  44689989 aaagagtagtgatatttgaacaattcttttggaacaacttttgggacaaccttgttg 44689933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 31763991 - 31763932
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||  |||||| ||||    
T  31763991 agagtaatgatatttaaacaactattttggtacaatttttgggacaattttgttgttctc 31763932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 9158936 - 9158977
Alignment:
Q  220 ttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  9158936 ttgaacaacttttttgctacaacttttgggacaaccttgttg 9158977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 16295641 - 16295589
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||| ||||    
T  16295641 tgatattttgacaactattttggtacaacttttgagacaactttgttgttctc 16295589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 32152075 - 32152023
Alignment:
Q  209 agcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||| ||||||||||| |||| ||||||| ||||||    
T  32152075 agcagtgatatttgaacaacttttttggtacaatttttaggacaactttgttg 32152023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 45966792 - 45966752
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggaca 252  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  45966792 aatgatatttgaacaaatattttggttcaacttttgggaca 45966752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 2935408 - 2935451
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||    
T  2935408 tatttgaacaactcttttagtacaacttttgtgacaaccttgtt 2935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 25595944 - 25595979
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttg 247  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25595944 aatgatatttgtacaactattttggtacaacttttg 25595979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 48205219 - 48205176
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||    
T  48205219 tatttgaacaactcttttagtacaacttttgtgacaaccttgtt 48205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 395
Target Start/End: Original strand, 7351676 - 7351714
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctctattt 395  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  7351676 ttatacaaaaatggttgtacaaatatcatttctctattt 7351714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 38296548 - 38296618
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||| |||||||||||||||||| ||||| || || |||| ||||||||||| |  ||||| ||||||||    
T  38296548 aagagtaatgatatttgaacaactcttttgttataattttttggacaaccttgatattctcccttcttatt 38296618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 395
Target Start/End: Original strand, 47141638 - 47141676
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctctattt 395  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  47141638 ttataccaaaatggttgtacaaatatcatttctcaattt 47141676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 395
Target Start/End: Complemental strand, 49886727 - 49886689
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctctattt 395  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  49886727 ttatagcaaaatggttgtacaaatatcatttctctattt 49886689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 50025736 - 50025770
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctct 391  Q
    ||||||||||||||||||| |||||||||||||||    
T  50025736 ttataccaaaatggttgtacaaatatcatttctct 50025770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 390
Target Start/End: Complemental strand, 25559737 - 25559704
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctc 390  Q
    ||||||||||||||||||| ||||||||||||||    
T  25559737 ttataccaaaatggttgtacaaatatcatttctc 25559704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 25596111 - 25596074
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaa 253  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  25596111 atatttgaacaactattttagtacaactttagggacaa 25596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 39629906 - 39629861
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    ||||||||||| |||||||||||  ||||||||||| |||||||||    
T  39629906 aatgatatttgtacaactatttttttacaacttttgtgacaacctt 39629861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 43220027 - 43220088
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||| | |||||||||||||||| |||| ||| ||||||||||||||  |||||| ||||    
T  43220027 aaagagtagtgatatttgaacaacttttttagtataacttttgggacaattttgttgttctc 43220088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 46019459 - 46019508
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||||| ||||||||||||||| ||||||||  |||||||||| ||||||    
T  46019459 aaagagaaatgatatttgaacatctattttgcgacaacttttgtgacaac 46019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 50745728 - 50745679
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| | ||||| || || |||||||||||||||||||    
T  50745728 aatgatatttgaacaatttttttgctataatttttgggacaaccttgttg 50745679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 30664687 - 30664639
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||| | ||||||||||| |||| |||||||||||||||||| ||||    
T  30664687 aaagagtagtgatatttgaataacttttttggtacaacttttggaacaa 30664639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 33256336 - 33256308
Alignment:
Q  363 caaaatggttgtataaatatcatttctct 391  Q
    |||||||||||||||||||||||||||||    
T  33256336 caaaatggttgtataaatatcatttctct 33256308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 49983424 - 49983376
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||| ||||||||||||||| | |||| | ||||||||||||||||||    
T  49983424 aagagaaatgatatttgaacatccatttggttacaacttttgggacaac 49983376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 52381216 - 52381184
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttc 388  Q
    |||||||||||||||||||| ||||||||||||    
T  52381216 gttataccaaaatggttgtacaaatatcatttc 52381184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 8577388 - 8577448
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  8577388 aagagcaatgatatttgaacaactattttggtataacttttgggacaaccttgttgttctc 8577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 31244619 - 31244681
Alignment:
Q  204 gaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  31244619 gaaagagcaatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctc 31244681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 37947112 - 37947166
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  37947112 aatgatatttgaacaactattttgttacaacttttgggacaaccttgttgttctc 37947166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 48336347 - 48336411
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| || ||||| ||||||||    
T  48336347 aatgatatttgaacaactattttgttacaactttttggacaaccttgatgttctcccttcttatt 48336411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 11121663 - 11121610
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  11121663 gagcaatgatatttgaacaactattttggtataacttttgtgacaatcttgttg 11121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 41564765 - 41564821
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  41564765 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 41564821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 12990379 - 12990426
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  12990379 tgatatttgaacaactcttttgatacaacttttgggacaaccttgttg 12990426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 48962163 - 48962116
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  48962163 tgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 48962116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 29094635 - 29094685
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  29094635 agagtaatgatatttgaacaactcttttgatacaacttttgggacaacctt 29094685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 40239998 - 40240052
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  40239998 agagtaataatatttgaacaacttttttgctacaacttttgggacaaccttgttg 40240052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 836045 - 836002
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  836045 tatttgaacaactcttttggtacaacttttgggacaatcttgtt 836002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 21263200 - 21263153
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  21263200 tgatatttgaacaactatttttgtacaatttttgagacaaccttgttg 21263153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 23399883 - 23399930
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  23399883 tgatatttaaacaactcttttggtacaatttttgggacaaccttgttg 23399930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 40118601 - 40118656
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||| | ||||| ||||| |||||||||||||||||||    
T  40118601 aagagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttg 40118656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 43105285 - 43105242
Alignment:
Q  211 caatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  43105285 caatgatatttgaacaattattttggtacaatttttgggacaac 43105242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 11038295 - 11038261
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctct 391  Q
    |||||||||||||||||||||||||||||||||||    
T  11038295 ttataccaaaatggttgtataaatatcatttctct 11038261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 11897359 - 11897289
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||| |||||||||| |  ||||| ||||||||    
T  11897359 aagagtaatgatatttgaacaactcttttgttacaatttttgtgacaaccttgatattctcccttcttatt 11897289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 35030659 - 35030696
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaac 242  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35030659 aaagagtaatgatatttgaacaactattttggtacaac 35030696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 1100391 - 1100348
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||    
T  1100391 tatttgaacaactcttttagtacaacttttgtgacaaccttgtt 1100348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 391
Target Start/End: Complemental strand, 19427551 - 19427520
Alignment:
Q  360 taccaaaatggttgtataaatatcatttctct 391  Q
    ||||||||||||||||||||||||||||||||    
T  19427551 taccaaaatggttgtataaatatcatttctct 19427520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 29638892 - 29638853
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  29638892 tgatatttgaacaactcttttggtacaatttttgggacaa 29638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 30415032 - 30414994
Alignment:
Q  223 aacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  30415032 aacaactcttttggtacaacttttgggacaatcttgttg 30414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 50875616 - 50875566
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||| |||||||||||||||||||||||  ||||||||||  |||||||||    
T  50875616 agagtaatgatatttgaacaactattttaatacaacttttaagacaacctt 50875566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 21854537 - 21854496
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  21854537 aagagaaatgatatttgtacaattattttggtacaacttttg 21854496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 392
Target Start/End: Original strand, 30530618 - 30530647
Alignment:
Q  363 caaaatggttgtataaatatcatttctcta 392  Q
    ||||||||||||||||||||||||||||||    
T  30530618 caaaatggttgtataaatatcatttctcta 30530647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 30596896 - 30596851
Alignment:
Q  209 agcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||| ||||||||||||| ||||||||||||||| |||| ||||||    
T  30596896 agcactgatatttgaacagctattttggtacaacctttgagacaac 30596851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 41425246 - 41425279
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttt 245  Q
    ||||||||||| ||||||||||||||||||||||    
T  41425246 aatgatatttgtacaactattttggtacaacttt 41425279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 46903656 - 46903595
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||| | |||||||| |||||| ||||||||||||| |||| |||||| |||||| ||||    
T  46903656 aaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttgttgttctc 46903595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 50796175 - 50796134
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttg 258  Q
    ||||||||||||| |||| ||||||| |||||||||||||||    
T  50796175 tatttgaacaactctttttgtacaacatttgggacaaccttg 50796134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 8577539 - 8577575
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctcta 392  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  8577539 gttatacaaaaatggttgtacaaatatcatttctcta 8577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 32966450 - 32966402
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttgggacaacct 256  Q
    ||||||||||||||||||||||||||    |||||||||| ||||||||    
T  32966450 gagcaatgatatttgaacaactatttactaacaacttttgtgacaacct 32966402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 36930642 - 36930693
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||||||||||||||||||||| ||||| ||||||| |||  |||||||||    
T  36930642 aaagagcaatgatatttgaacaaccatttt-gtacaacctttttgacaacctt 36930693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 40053083 - 40053031
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||| |||||||||||||||||||  |||| |||||| |||||| ||||    
T  40053083 tgatattttaacaactattttggtacaatctttgagacaactttgttgttctc 40053031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 48634367 - 48634411
Alignment:
Q  213 atgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    ||||||| || ||||||||||||  ||||||||||||||||||||    
T  48634367 atgatatctgtacaactattttgtgacaacttttgggacaacctt 48634411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 18550163 - 18550109
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18550163 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 18550109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 22203101 - 22203156
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  22203101 aagagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 22203156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 42651099 - 42651045
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  42651099 aatgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctc 42651045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1422594 - 1422642
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1422594 aatgatatttgaacaactattttgatacaacttttgggacaaccttgtt 1422642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 21649055 - 21649111
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  21649055 aaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 21649111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 41776361 - 41776305
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  41776361 aaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 41776305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 25430823 - 25430776
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  25430823 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttg 25430776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 28713281 - 28713223
Alignment:
Q  203 tgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28713281 tgaaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 28713223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 28720628 - 28720570
Alignment:
Q  203 tgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28720628 tgaaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 28720570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 28728270 - 28728212
Alignment:
Q  203 tgaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28728270 tgaaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttg 28728212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 34838157 - 34838211
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  34838157 agagcagtgatatttgaacaactcttttggtacaacttttaggacaaccttgttg 34838211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 37471828 - 37471773
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  37471828 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 37471773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 34883343 - 34883278
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatta 277  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||||||| ||||  |||||||||    
T  34883343 aatgatatttaaacaactattttagtacaacttttgatacaaccttgttgttctctcttcttatta 34883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 22836024 - 22836080
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||| ||||| |||||||| ||||||||||    
T  22836024 aaagagtaatgatatttgaacaacttttttgctacaatttttgggataaccttgttg 22836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 23709163 - 23709107
Alignment:
Q  204 gaaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||| |||| ||||||||||||| ||||| ||||| ||||||||||||||||||    
T  23709163 gaaagagtaatgttatttgaacaacttttttgctacaatttttgggacaaccttgtt 23709107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 34578229 - 34578293
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||||||||| |||||||||||||||| || |||||||||||| |||||| ||||  ||||||||    
T  34578229 aatgatattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttatt 34578293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 4148549 - 4148592
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  4148549 tgatatttgaacgactcttttggtacaacttttgggacaacctt 4148592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 8233383 - 8233442
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||| |||||||||| ||||    
T  8233383 agagtaatgatatttgaacatctatttttgtacaactttttggataaccttgttgttctc 8233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 27300523 - 27300476
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  27300523 tgatatttgaacaactctttcggtacaacttttgggacaatcttgttg 27300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 13924184 - 13924139
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||    
T  13924184 atatttgaacaactcttttggtacaacttttgtgacaatcttgttg 13924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 44001240 - 44001171
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||| |||||||||||||||||| ||||| ||||  |||| ||||||||||| || ||||| ||||||||    
T  44001240 agagtaatgatatttgaacaactcttttgttacatttttttggacaaccttgatgttctcccttcttatt 44001171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 37784411 - 37784447
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37784411 gttataccaaaatggttgtacaaatatcatttctcta 37784447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 42443291 - 42443240
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    |||||||||||||||||||||||||| |||||||||| ||||  |||||||||    
T  42443291 aaagagcaatgatatttgaacaacta-tttggtacaaattttttgacaacctt 42443240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 45405852 - 45405888
Alignment:
Q  363 caaaatggttgtataaatatcatttctctatttgaat 399  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45405852 caaaatggttgtacaaatatcatttctctatttgaat 45405888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 5742698 - 5742733
Alignment:
Q  360 taccaaaatggttgtataaatatcatttctctattt 395  Q
    |||||||||||||||| |||||||||||||||||||    
T  5742698 taccaaaatggttgtacaaatatcatttctctattt 5742733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 30462637 - 30462672
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaac 242  Q
    |||| |||||||||||||||||||||||||||||||    
T  30462637 agagtaatgatatttgaacaactattttggtacaac 30462672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 32674269 - 32674304
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctct 391  Q
    |||||||||||||||||||| |||||||||||||||    
T  32674269 gttataccaaaatggttgtacaaatatcatttctct 32674304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 33692905 - 33692851
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| ||||| || || |||||||||||| ||||||    
T  33692905 agagtaatgatatttgaacaacttttttgttataatttttgggacaactttgttg 33692851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 34247953 - 34247899
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||| |||||  |||||  |||||||||||||||||||||||| ||||    
T  34247953 aatgatatttgtacaacccttttgagacaacttttgggacaaccttgttgttctc 34247899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 3000761 - 3000728
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtaca 240  Q
    |||| |||||||||||||||||||||||||||||    
T  3000761 agagtaatgatatttgaacaactattttggtaca 3000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 23709010 - 23708973
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctctat 393  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  23709010 gttatacaaaaatggttgtacaaatatcatttctctat 23708973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 35701742 - 35701783
Alignment:
Q  219 tttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||| | ||||||||||||||||||||||| ||||||    
T  35701742 tttgaacaattcttttggtacaacttttgggacaatcttgtt 35701783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 5742729 - 5742689
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  5742729 agagaaatgatatttgtacaaccattttggtacaacttttg 5742689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 18411194 - 18411234
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  18411194 tatttgaacaattattttagtacaatttttgggacaacctt 18411234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 33511786 - 33511738
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||| ||||||||||| ||||||||||||  | |||||||||||||||    
T  33511786 aagagtaatgatatttgtacaactattttgtgaaaacttttgggacaac 33511738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 38939256 - 38939212
Alignment:
Q  201 tttgaaagagcaatgatatttgaacaactattttggtacaacttt 245  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  38939256 tttgaaagagaaatgatatttctacaactatttttgtacaacttt 38939212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 8757728 - 8757659
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||    
T  8757728 agagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttatt 8757659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 28679311 - 28679257
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28679311 agagtaatgatatttgaacaactcttttggtacaacttttgggacaaccttgttg 28679257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 35518459 - 35518390
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||  ||||||||    
T  35518459 agagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttatt 35518390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 23141531 - 23141479
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  23141531 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctc 23141479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 23553321 - 23553269
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  23553321 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctc 23553269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 30340171 - 30340119
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  30340171 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctc 30340119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 45202018 - 45202073
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  45202018 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttg 45202073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 35007986 - 35008042
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  35007986 aaagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttg 35008042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 5852635 - 5852588
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5852635 tgatatttgaacaactcttttggtaaaacttttgggacaaccttgttg 5852588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 11828706 - 11828761
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  11828706 aagagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttg 11828761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 12257078 - 12257031
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12257078 tgatatttgaacaacttttttggtacaatttttgggacaaccttgttg 12257031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 26387725 - 26387772
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  26387725 tgatatttgaacaactcttttgatacaacttttgggacaaccttgttg 26387772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 35705803 - 35705858
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  35705803 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 35705858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 16463476 - 16463422
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| |||||||||||||||||| || |||||||||||||||||||| |||||||    
T  16463476 agagtaatgatatttgaacaactcttatggtacaacttttgggacaatcttgttg 16463422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 35203634 - 35203690
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||| | ||||| ||||| |||||||||||||||||||    
T  35203634 aaagagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttg 35203690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 43515069 - 43515025
Alignment:
Q  213 atgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  43515069 atgatatttgaacaactcttttgttacaacttttgggacaacctt 43515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 44897800 - 44897756
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  44897800 tatttgaacaactcttttgatacaacttttgggacaaccttgttg 44897756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 11152585 - 11152640
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||| | |||||||||| |||||||||||| |||||||    
T  11152585 aagagtaatgatatttgaacaaattttttggtacagcttttgggacaatcttgttg 11152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 27529712 - 27529657
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| ||||||||||||||||||  |||| ||||||||| |||||||||||||||    
T  27529712 aagagtaatgatatttgaacaacttctttgctacaactttcgggacaaccttgttg 27529657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 34141620 - 34141573
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  34141620 tgatatttgaacaactcttttggtacaacttttggaacaactttgttg 34141573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 37064235 - 37064188
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  37064235 tgatatttgatcaactcttttggtacaacttttgggataaccttgttg 37064188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 40115700 - 40115645
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    ||||| |||||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  40115700 aagagtaatgatatttgaacaacttttttactacaatttttgggacaaccttgttg 40115645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 33569753 - 33569699
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||| || ||||||||||||| ||||||||||||||||| |||||| |||||    
T  33569753 aagagcagtgttatttgaacaactcttttggtacaacttttgagacaactttgtt 33569699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 38778075 - 38778021
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  38778075 agagtaatgatatttgaataacttttttgctataacttttgggacaaccttgttg 38778021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 27538828 - 27538873
Alignment:
Q  216 atatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  27538828 atatttgaacaacttttttgctacaactttcgggacaaccttgttg 27538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 43205272 - 43205223
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  43205272 aatgttatttgaacaacttttttgctacaacttttgggacaactttgttg 43205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 3839444 - 3839408
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3839444 gttataccaaaatggttgtacaaatatcatttctcta 3839408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 38533092 - 38533144
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||| || | ||||||||||| ||||||||||||||||||| ||||    
T  38533092 tgatatttgaataattcttttggtacaatttttgggacaaccttgttgttctc 38533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 17999917 - 17999874
Alignment:
Q  218 atttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||| ||||| || ||||||||||||||||||||||    
T  17999917 atttgaacaacttttttgctataacttttgggacaaccttgttg 17999874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 24491562 - 24491633
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||||||| |||||||||||||| | ||||| ||||||||||| ||||| ||| ||| ||||  ||||||||    
T  24491562 aaagagcagtgatatttgaacaattcttttgatacaacttttgagacaatcttattgttctctcttcttatt 24491633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 28508477 - 28508528
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaacctt 257  Q
    ||||| ||||||||||| ||||| ||||||  ||||||||||||||||||||    
T  28508477 aagagtaatgatatttgtacaaccattttgtgacaacttttgggacaacctt 28508528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 43559988 - 43560031
Alignment:
Q  223 aacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||||||||||||||| | |||||||||||| ||||    
T  43559988 aacaactattttggtacaactttttgaacaaccttgttgttctc 43560031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 7574439 - 7574481
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||    
T  7574439 aatgatatttgaacatctattttgctacaacttttgagacaac 7574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 13711247 - 13711198
Alignment:
Q  204 gaaagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||||| | ||||||||||||||||||||| |||||||||||| ||||||    
T  13711247 gaaagagtagtgatatttgaacaactatttt-gtacaacttttgtgacaac 13711198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 22296016 - 22296070
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||| |||||||||||||| ||||  ||||| |||||||||||||||||||    
T  22296016 agagtaataatatttgaacaactttttttctacaatttttgggacaaccttgttg 22296070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 27329003 - 27329061
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttct 272  Q
    |||||||| |||||| ||||||||||| |||||| |||||| |||||| |||| |||||    
T  27329003 tgatattttaacaacaattttggtacatcttttgagacaactttgttgttctcttttct 27329061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 3681537 - 3681496
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttg 258  Q
    ||||||||||||| |||| |||||| ||||||||||||||||    
T  3681537 tatttgaacaactctttttgtacaatttttgggacaaccttg 3681496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 390
Target Start/End: Complemental strand, 6328700 - 6328667
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttctc 390  Q
    ||||||||||||||||||| ||||||||||||||    
T  6328700 ttataccaaaatggttgtacaaatatcatttctc 6328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 19523293 - 19523334
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||| ||||||||||||||||||| |||||| ||||    
T  19523293 aatgatatttaaacaactattttggtacaatttttggtacaa 19523334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 35798388 - 35798339
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||||||||||||| ||||| || || |||||||||||||||||||    
T  35798388 aatgttatttgaacaacttttttgttataatttttgggacaaccttgttg 35798339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 41156895 - 41156936
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||||||||| | ||||| |||||||||||||||||    
T  41156895 aatgatatttgaacaatttttttgctacaacttttgggacaa 41156936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 1151706 - 1151654
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||  ||||||||||||||||||| |||| |||||| |||||| ||||    
T  1151706 tgatattttgacaactattttggtacaacctttgagacaactttgttgttctc 1151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 392
Target Start/End: Original strand, 9834115 - 9834143
Alignment:
Q  364 aaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||||||||||||||||    
T  9834115 aaaatggttgtataaatatcatttctcta 9834143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 18749257 - 18749305
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgc 262  Q
    |||||||||||||| | |||||||| || |||| |||||||||||||||    
T  18749257 tgatatttgaacaaattttttggtataatttttaggacaaccttgttgc 18749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 34373038 - 34373006
Alignment:
Q  357 ttataccaaaatggttgtataaatatcatttct 389  Q
    ||||||||||||||||||| |||||||||||||    
T  34373038 ttataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 37076832 - 37076784
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||| ||||||||||||| |||| |||||| ||||| ||||||||||||    
T  37076832 aatgttatttgaacaactcttttagtacaatttttgtgacaaccttgtt 37076784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 23034207 - 23034269
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctcctttcttatt 276  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||    
T  23034207 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttatt 23034269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 47945169 - 47945113
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47945169 aaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttg 47945113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 47950599 - 47950543
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47950599 aaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttg 47950543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 24380615 - 24380662
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  24380615 tgatatttgaacaactcttttggtacaacttttggaacaaccttgttg 24380662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 48639279 - 48639326
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  48639279 tgatatttgaacaactcttttggtacaacttttggaacaaccttgttg 48639326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 394
Target Start/End: Original strand, 33881742 - 33881780
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctctatt 394  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33881742 gttataccaaaatggttgtataaatatcatttctctatt 33881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 38197840 - 38197791
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  38197840 aatgatatttgaacaacttttttgctacaacttttgggacaatcttgttg 38197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 11788380 - 11788428
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  11788380 aatgatatttgaacaactattttgatacaacttttgggccaaccatgtt 11788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 45336040 - 45335988
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||    
T  45336040 tgatatttgaactactcttttggtacaaattttgggacaaccttgttgttctc 45335988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 27704612 - 27704565
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  27704612 tgatatttgaacaactcttttgttacaacttttgggacaactttgttg 27704565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 29923847 - 29923801
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  29923847 tgatatttgaacaactcttttggtacaactttt-ggacaaccttgttg 29923801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 41538657 - 41538610
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| | ||||| |||||||||||||||||||||||||    
T  41538657 tgatatttgaacaattcttttgatacaacttttgggacaaccttgttg 41538610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 41910079 - 41910126
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||    
T  41910079 tgatatttgaacaattcttttggtacaacttttaggacaaccttgttg 41910126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 28548294 - 28548253
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  28548294 aagagaaatgatatttgtacaactattttggtacaacttttg 28548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 39415604 - 39415548
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| ||||||||||||| || |||||| ||||||||||| | ||||||||||||    
T  39415604 aaagagtaatgatatttgaataattattttagtacaacttttagtacaaccttgttg 39415548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 1709461 - 1709414
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||| || ||||||||||| |||||||    
T  1709461 tgatatttgaacaactcttttggtataatttttgggacaatcttgttg 1709414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 25272765 - 25272722
Alignment:
Q  217 tatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||    
T  25272765 tatttgaacaactcttttagtacaacttttgtgacaaccttgtt 25272722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 41018662 - 41018709
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||| ||||||||||||||||||||||| | |||||||||| ||||||    
T  41018662 agagaaatgatatttgaacaactatttttggacaacttttgtgacaac 41018709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 403
Target Start/End: Original strand, 47530336 - 47530375
Alignment:
Q  364 aaaatggttgtataaatatcatttctctatttgaattgac 403  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  47530336 aaaatggttgtataaatatcatttctcttattgaattgac 47530375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 10591033 - 10591083
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaacc 255  Q
    ||||||||||||||||||||||||||||| |  |||||||||  |||||||    
T  10591033 aaagagcaatgatatttgaacaactatttggtgacaacttttatgacaacc 10591083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 22331097 - 22331151
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    ||||| |||| ||||||||||| | ||||| ||||| ||||||||||||||||||    
T  22331097 aagagtaatgttatttgaacaatttttttgctacaatttttgggacaaccttgtt 22331151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 27704432 - 27704474
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttg 247  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||    
T  27704432 aaagagaaatgatatttgtacaactatttttgtacaacttttg 27704474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 37848507 - 37848561
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||| ||| |||||||||||||| ||||| |||||||||| ||| ||||||||||    
T  37848507 agagtaattatatttgaacaacttttttgctacaacttttaggataaccttgttg 37848561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 41458788 - 41458846
Alignment:
Q  208 gagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||||||||  ||||  |||||||||||||||||| |||||| |||||| ||||    
T  41458788 gagcaatgatattttgacaatcattttggtacaacttttgagacaactttgttgttctc 41458846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 44185353 - 44185311
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaacct 256  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  44185353 tgatatttgaacaactcttttgatacaacttttgagacaacct 44185311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 7295651 - 7295598
Alignment:
Q  207 agagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||| ||||||||||| |||||| |||||  ||||||||||| |||||||||||    
T  7295651 agagtaatgatatttgtacaacttttttgagacaacttttggaacaaccttgtt 7295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 276
Target Start/End: Original strand, 11789611 - 11789644
Alignment:
Q  243 ttttgggacaaccttgttgctctcctttcttatt 276  Q
    ||||||||||||||||||||||||| ||||||||    
T  11789611 ttttgggacaaccttgttgctctccattcttatt 11789644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 44184633 - 44184584
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||||| ||||||||||||||| ||||||||  |||||||||| ||||||    
T  44184633 aaagagaaatgatatttgaacatctattttgcgacaacttttgtgacaac 44184584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 11070262 - 11070226
Alignment:
Q  356 gttataccaaaatggttgtataaatatcatttctcta 392  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  11070262 gttatactaaaatggttgtacaaatatcatttctcta 11070226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 19426607 - 19426575
Alignment:
Q  363 caaaatggttgtataaatatcatttctctattt 395  Q
    ||||||||||||| |||||||||||||||||||    
T  19426607 caaaatggttgtacaaatatcatttctctattt 19426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 233
Target Start/End: Original strand, 25940553 - 25940581
Alignment:
Q  205 aaagagcaatgatatttgaacaactattt 233  Q
    |||||||||||||||||||||||||||||    
T  25940553 aaagagcaatgatatttgaacaactattt 25940581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 32428252 - 32428213
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaactttt 246  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  32428252 aagagcaatgatatttgaacaacta-tttgatacaactttt 32428213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 35072132 - 35072167
Alignment:
Q  206 aagagcaatgatatttgaacaactattttggtacaac 242  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35072132 aagagcaatgatatttgaacaacta-tttggtacaac 35072167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 37970110 - 37970058
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    |||||||| |||||| ||||||||||||| |||| |||||| |||||| ||||    
T  37970110 tgatattttaacaaccattttggtacaacatttgagacaactttgttgttctc 37970058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 40207724 - 40207764
Alignment:
Q  213 atgatatttgaacaactattttggtacaacttttgggacaa 253  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  40207724 atgatatttgaataatttttttggtacaacttttgggacaa 40207764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 392
Target Start/End: Original strand, 46260137 - 46260165
Alignment:
Q  364 aaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||||||||||||||||    
T  46260137 aaaatggttgtataaatatcatttctcta 46260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 47379737 - 47379685
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgctctc 266  Q
    ||||||||  |||||||||||||| ||||||||| |||||| |||||| ||||    
T  47379737 tgatattttgacaactattttggtgcaacttttgagacaactttgttgttctc 47379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 49128750 - 49128722
Alignment:
Q  363 caaaatggttgtataaatatcatttctct 391  Q
    |||||||||||||||||||||||||||||    
T  49128750 caaaatggttgtataaatatcatttctct 49128722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 145224 - 145177
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  145224 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttg 145177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 1741 - 1787
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaaccttgtt 260  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  1741 tgatatttgaacaactcttttggtacaacttttgggacaatcttgtt 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 48840 - 48784
Alignment:
Q  205 aaagagcaatgatatttgaacaactattttggtacaacttttgggacaaccttgttg 261  Q
    |||||| |||||||||||||||| | ||||| ||||| |||||||||||||||||||    
T  48840 aaagagtaatgatatttgaacaattcttttgatacaatttttgggacaaccttgttg 48784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 3122 - 3080
Alignment:
Q  212 aatgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  3122 aatgatatttgaacaacttttttgctacaacttttgggacaac 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 18864 - 18831
Alignment:
Q  213 atgatatttgaacaactattttggtacaactttt 246  Q
    |||||||||||||||||||||||| |||||||||    
T  18864 atgatatttgaacaactattttggaacaactttt 18831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 30541 - 30574
Alignment:
Q  213 atgatatttgaacaactattttggtacaactttt 246  Q
    |||||||||||||||||||||||| |||||||||    
T  30541 atgatatttgaacaactattttggaacaactttt 30574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Original strand, 4887 - 4919
Alignment:
Q  360 taccaaaatggttgtataaatatcatttctcta 392  Q
    |||||||||||||||| ||||||||||||||||    
T  4887 taccaaaatggttgtacaaatatcatttctcta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 15084 - 15123
Alignment:
Q  214 tgatatttgaacaactattttggtacaacttttgggacaac 254  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  15084 tgatatttgaacaacta-tttggtacaacttttgtgacaac 15123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 35999 - 36027
Alignment:
Q  365 aaatggttgtataaatatcatttctctat 393  Q
    |||||||||||||||||||||||||||||    
T  35999 aaatggttgtataaatatcatttctctat 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University